Pregenerated sensors for LINC01164 (Homo sapiens)
Ensembl gene IDs: ENSG00000189275Ensembl transcript IDs: ENST00000341866.3, ENST00000655798.1, ENST00000667493.1
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCCAGGACGCGGCTGCAAAGGACCCGTGGAGAGCATCGGAGCGGCTaGGAAGGACCGGTGGAGAGCGGCAGAGAGGCAGGCCCCGGCATG | + |
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Preference number: 5 (lower is better) Translates to: ARTRLQRTRGEHRSG*EGPVESGREAGPGM Trigger: CATGCCGGGGCCTGCCTCTCTGCCGCTCTCCACCGGTCCTTCGCAGCCGCTCCGATGCTCTCCACGGGTCCTTTGCAGCCGCGTCCTGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS CCA 90 bp | GCTGCGAAGGACCGGTGGAGAGCGGCAGAGAGGCAGGCCCCGGCATaGAAGCCGCTCCTCGCTCAGCTGGGGGCTGAACCTGTGTCTGCA | + |
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Preference number: 5 (lower is better) Translates to: AAKDRWRAAERQAPA*KPLLAQLGAEPVSA Trigger: TGCAGACACAGGTTCAGCCCCCAGCTGAGCGAGGAGCGGCTTCCATGCCGGGGCCTGCCTCTCTGCCGCTCTCCACCGGTCCTTCGCAGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS CCA 90 bp | TGCAAAGGACCCGTGGAGAGCATCGGAGCGGCTGCGAAGGACCGGTaGAGAGCGGCAGAGAGGCAGGCCCCGGCATGGAAGCCGCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: CKGPVESIGAAAKDR*RAAERQAPAWKPLL Trigger: GAGGAGCGGCTTCCATGCCGGGGCCTGCCTCTCTGCCGCTCTCCACCGGTCCTTCGCAGCCGCTCCGATGCTCTCCACGGGTCCTTTGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS GCA 90 bp | TCCGCAGAGAGGCGAGGGTCCCACAGGCACCCACTTCCTTCTCGGTaGTGGCTGGGCTTCTGCACAGTGACGGCCCGCCTCCCCTCTCTG | + |
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Preference number: 5 (lower is better) Translates to: SAERRGSHRHPLPSR*WLGFCTVTARLPSL Trigger: CAGAGAGGGGAGGCGGGCCGTCACTGTGCAGAAGCCCAGCCAGCACCGAGAAGGAAGTGGGTGCCTGTGGGACCCTCGCCTCTCTGCGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS CCA 90 bp | GGGTCAGTGTGCACCATCTCAGGCTCTTCTGCACGCCCATGTGGGTaGGGTCGGGGTTGGGTGTCTCGGCCAGGTGGAGGCTGGGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: GSVCTISGSSARPCG*GRGWVSRPGGGWAR Trigger: CCTGGCCCAGCCTCCACCTGGCCGAGACACCCAACCCCGACCCCACCCACATGGGCGTGCAGAAGAGCCTGAGATGGTGCACACTGACCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341866.3 |
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| CDS CCA 90 bp | GCAGAGAGGCGAGGGTCCCACAGGCACCCACTTCCTTCTCGGTGCTaGCTGGGCTTCTGCACAGTGACGGCCCGCCTCCCCTCTCTGGCA | + |
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Preference number: 5 (lower is better) Translates to: AERRGSHRHPLPSRC*LGFCTVTARLPSLA Trigger: TGCCAGAGAGGGGAGGCGGGCCGTCACTGTGCAGAAGCCCAGCCAGCACCGAGAAGGAAGTGGGTGCCTGTGGGACCCTCGCCTCTCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS CCA 90 bp | CCATGGGTCAGTGTGCACCATCTCAGGCTCTTCTGCACGCCCATGTaGGTGGGGTCGGGGTTGGGTGTCTCGGCCAGGTGGAGGCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: PWVSVHHLRLFCTPM*VGSGLGVSARWRLG Trigger: GCCCAGCCTCCACCTGGCCGAGACACCCAACCCCGACCCCACCCACATGGGCGTGCAGAAGAGCCTGAGATGGTGCACACTGACCCATGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341866.3 |
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| CDS GCA 90 bp | GGGTCCCACAGGCACCCACTTCCTTCTCGGTGCTGGCTGGGCTTCTaGACAGTGACGGCCCGCCTCCCCTCTCTGGCAGAAGAGAGGACA | + |
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Preference number: 5 (lower is better) Translates to: GSHRHPLPSRCWLGF*TVTARLPSLAEERT Trigger: TGTCCTCTCTTCTGCCAGAGAGGGGAGGCGGGCCGTCACTGTGCAGAAGCCCAGCCAGCACCGAGAAGGAAGTGGGTGCCTGTGGGACCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS CCA 90 bp | CGTGGCAGCGCCCGCCTCCTGAATCACTCCCGCTGGGGTTCTCTCTaGCAACGCAAAGCACAGCACAGAAGCAGGACGAGGCCCCAGCCT | + |
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Preference number: 5 (lower is better) Translates to: RGSARLLNHSRWGSL*QRKAQHRSRTRPQP Trigger: AGGCTGGGGCCTCGTCCTGCTTCTGTGCTGTGCTTTGCGTTGCCAGAGAGAACCCCAGCGGGAGTGATTCAGGAGGCGGGCGCTGCCACG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341866.3 ENST00000667493.1 |
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| CDS GCA 90 bp | GGCCAGGTGGAGGCTGGGCCAGGCCCCAAAGCTGTGGGCGGCAGATaGTGCATCCACCTCCTCTGGCTTGGATCTAGAAGCTTCCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: GQVEAGPGPKAVGGR*CIHLLWLGSRSFLL Trigger: GAGGAGGAAGCTTCTAGATCCAAGCCAGAGGAGGTGGATGCAGCATCTGCCGCCCACAGCTTTGGGGCCTGGCCCAGCCTCCACCTGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341866.3 |
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| CDS TCA 90 bp | CTCCAGGAGGTTCTCTGCAGTCAGGACGTGGCAGCGCCCGCCTCCTaGATCACTCCCGCTGGGGTTCTCTCTGGCAACGCAAAGCACAGC | + |
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Preference number: 5 (lower is better) Translates to: LQEVLCSQDVAAPAS*ITPAGVLSGNAKHS Trigger: GCTGTGCTTTGCGTTGCCAGAGAGAACCCCAGCGGGAGTGATTCAGGAGGCGGGCGCTGCCACGTCCTGACTGCAGAGAACCTCCTGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341866.3 ENST00000667493.1 |
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| CDS TCA 90 bp | CTCCAGGAGGTTCTCTGCAGTCAGGACGTGGCAGCGCCCGCCTCCTaGATCACTCCCGCTGGGGTTCTCTTCCCACGTGAGCAACCGAGA | + |
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Preference number: 5 (lower is better) Translates to: LQEVLCSQDVAAPAS*ITPAGVLFPREQPR Trigger: TCTCGGTTGCTCACGTGGGAAGAGAACCCCAGCGGGAGTGATTCAGGAGGCGGGCGCTGCCACGTCCTGACTGCAGAGAACCTCCTGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655798.1 |
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| CDS GCA 90 bp | CCGGCCATGCAGCTCAACATTCTGCCACTGCAGCCTGGCATCCCCTaGTGCCAGGAACCACGCAGAGAGGCACTGCTCCACGTGGAAACC | + |
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Preference number: 5 (lower is better) Translates to: PAMQLNILPLQPGIP*CQEPRREALLHVET Trigger: GGTTTCCACGTGGAGCAGTGCCTCTCTGCGTGGTTCCTGGCAGCAGGGGATGCCAGGCTGCAGTGGCAGAATGTTGAGCTGCATGGCCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS CCA 90 bp | TTGGGTGTCTCGGCCAGGTGGAGGCTGGGCCAGGCCCCAAAGCTGTaGGCGGCAGATGCTGCATCCACCTCCTCTGGCTTGGATCTAGAA | + |
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Preference number: 5 (lower is better) Translates to: LGVSARWRLGQAPKL*AADAASTSSGLDLE Trigger: TTCTAGATCCAAGCCAGAGGAGGTGGATGCAGCATCTGCCGCCCACAGCTTTGGGGCCTGGCCCAGCCTCCACCTGGCCGAGACACCCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341866.3 |
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| CDS CCA 90 bp | CAGCCCAGGCCGCTGCCTTCCTCCTCAACTCTCTCCAGCCGGAGTTaGGGGCGAATTGAAACCAGCCTCTCCGGTGGCCACGACTTTGAG | + |
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Preference number: 5 (lower is better) Translates to: QPRPLPSSSTLSSRS*GRIETSLSGGHDFE Trigger: CTCAAAGTCGTGGCCACCGGAGAGGCTGGTTTCAATTCGCCCCCAACTCCGGCTGGAGAGAGTTGAGGAGGAAGGCAGCGGCCTGGGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS CCA 90 bp | CTGCAGTCAGGACGTGGCAGCGCCCGCCTCCTGAATCACTCCCGCTaGGGTTCTCTCTGGCAACGCAAAGCACAGCACAGAAGCAGGACG | + |
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Preference number: 5 (lower is better) Translates to: LQSGRGSARLLNHSR*GSLWQRKAQHRSRT Trigger: CGTCCTGCTTCTGTGCTGTGCTTTGCGTTGCCAGAGAGAACCCCAGCGGGAGTGATTCAGGAGGCGGGCGCTGCCACGTCCTGACTGCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000341866.3 ENST00000667493.1 |
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| CDS TCA 90 bp | ACAGGCACCCACTTCCTTCTCGGTGCTGGCTGGGCTTCTGCACAGTaGCGGCCCGCCTCCCCTCTCTGGCAGAAGAGAGGACAATTCCAG | + |
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Preference number: 5 (lower is better) Translates to: TGTHFLLGAGWASAQ*RPASPLWQKRGQFQ Trigger: CTGGAATTGTCCTCTCTTCTGCCAGAGAGGGGAGGCGGGCCGTCACTGTGCAGAAGCCCAGCCAGCACCGAGAAGGAAGTGGGTGCCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS GCA 90 bp | CAGGTGGAGGCTGGGCCAGGCCCCAAAGCTGTGGGCGGCAGATGCTaGATCCACCTCCTCTGGCTTGGATCTAGAAGCTTCCTCCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: QVEAGPGPKAVGGRC*IHLLWLGSRSFLLS Trigger: AGAGAGGAGGAAGCTTCTAGATCCAAGCCAGAGGAGGTGGATGCAGCATCTGCCGCCCACAGCTTTGGGGCCTGGCCCAGCCTCCACCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341866.3 |
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| CDS GCA 90 bp | ACTGTAACTCTGCCATGGGTCAGTGTGCACCATCTCAGGCTCTTCTaGACGCCCATGTGGGTGGGGTCGGGGTTGGGTGTCTCGGCCAGG | + |
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Preference number: 5 (lower is better) Translates to: TVTLPWVSVHHLRLF*TPMWVGSGLGVSAR Trigger: CCTGGCCGAGACACCCAACCCCGACCCCACCCACATGGGCGTGCAGAAGAGCCTGAGATGGTGCACACTGACCCATGGCAGAGTTACAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341866.3 |
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| CDS GCA 90 bp | CCCTCTCTGGCAGAAGAGAGGACAATTCCAGGAGCCTCCCGTTCCTaGCTCCATCCAGCATGGGGGCCACCAACCCTCCAGTGCAGGCAT | + |
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Preference number: 5 (lower is better) Translates to: PSLAEERTIPGASRS*LHPAWGPPTLQCRH Trigger: ATGCCTGCACTGGAGGGTTGGTGGCCCCCATGCTGGATGGAGGCAGGAACGGGAGGCTCCTGGAATTGTCCTCTCTTCTGCCAGAGAGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS GCA 90 bp | GCCATGCAGCTCAACATTCTGCCACTGCAGCCTGGCATCCCCTGCTaGCAGGAACCACGCAGAGAGGCACTGCTCCACGTGGAAACCTGG | + |
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Preference number: 5 (lower is better) Translates to: AMQLNILPLQPGIPC*QEPRREALLHVETW Trigger: CCAGGTTTCCACGTGGAGCAGTGCCTCTCTGCGTGGTTCCTGGCAGCAGGGGATGCCAGGCTGCAGTGGCAGAATGTTGAGCTGCATGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS GCA 90 bp | CTTCGCATGAGTGGAAGCCGGCCATGCAGCTCAACATTCTGCCACTaGAGCCTGGCATCCCCTGCTGCCAGGAACCACGCAGAGAGGCAC | + |
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Preference number: 5 (lower is better) Translates to: LRMSGSRPCSSTFCH*SLASPAARNHAERH Trigger: GTGCCTCTCTGCGTGGTTCCTGGCAGCAGGGGATGCCAGGCTGCAGTGGCAGAATGTTGAGCTGCATGGCCGGCTTCCACTCATGCGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS CCA 90 bp | GAGAGGACAATTCCAGGAGCCTCCCGTTCCTGCCTCCATCCAGCATaGGGGCCACCAACCCTCCAGTGCAGGCATTTCCCACTCAGCCCA | + |
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Preference number: 5 (lower is better) Translates to: ERTIPGASRSCLHPA*GPPTLQCRHFPLSP Trigger: TGGGCTGAGTGGGAAATGCCTGCACTGGAGGGTTGGTGGCCCCCATGCTGGATGGAGGCAGGAACGGGAGGCTCCTGGAATTGTCCTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS CCA 90 bp | TGGTTGTCACCCCTGAGGAGGGGGTTGCTGCTGGCTTCGCATGAGTaGAAGCCGGCCATGCAGCTCAACATTCTGCCACTGCAGCCTGGC | + |
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Preference number: 5 (lower is better) Translates to: WLSPLRRGLLLASHE*KPAMQLNILPLQPG Trigger: GCCAGGCTGCAGTGGCAGAATGTTGAGCTGCATGGCCGGCTTCCACTCATGCGAAGCCAGCAGCAACCCCCTCCTCAGGGGTGACAACCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS TCA 90 bp | CAACTCGCTGGCATCACCCGGGCAGGCAGGCCGGCTGCCGTCGTCTaGTTTGTCAAGCGGCTCCCCTGTGCCTTATTCTACCTGGTACAT | + |
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Preference number: 5 (lower is better) Translates to: QLAGITRAGRPAAVV*FVKRLPCALFYLVH Trigger: ATGTACCAGGTAGAATAAGGCACAGGGGAGCCGCTTGACAAATCAGACGACGGCAGCCGGCCTGCCTGCCCGGGTGATGCCAGCGAGTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS GCA 90 bp | AGGCAGGCCGGCTGCCGTCGTCTGATTTGTCAAGCGGCTCCCCTGTaGCTTATTCTACCTGGTACATCGTCTCGACTCCCTTGGGGCTGT | + |
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Preference number: 5 (lower is better) Translates to: RQAGCRRLICQAAPL*LILPGTSSRLPWGC Trigger: ACAGCCCCAAGGGAGTCGAGACGATGTACCAGGTAGAATAAGGCACAGGGGAGCCGCTTGACAAATCAGACGACGGCAGCCGGCCTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS CCA 90 bp | GCATCCCCTGCTGCCAGGAACCACGCAGAGAGGCACTGCTCCACGTaGAAACCTGGAAGGAAGGCTTCCTTCGTCTCTCAGAAACACAAC | + |
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Preference number: 5 (lower is better) Translates to: ASPAARNHAERHCST*KPGRKASFVSQKHN Trigger: GTTGTGTTTCTGAGAGACGAAGGAAGCCTTCCTTCCAGGTTTCCACGTGGAGCAGTGCCTCTCTGCGTGGTTCCTGGCAGCAGGGGATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS TCA 90 bp | ACCCCCACTCCCAACAAGGTGTTCCTGAGACCACCCCACAGACACTaGTCCTTGTCTGGAATCTGCTTGTGGAGAAGCAAACCAGCAAAA | + |
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Preference number: 5 (lower is better) Translates to: TPTPNKVFLRPPHRH*SLSGICLWRSKPAK Trigger: TTTTGCTGGTTTGCTTCTCCACAAGCAGATTCCAGACAAGGATCAGTGTCTGTGGGGTGGTCTCAGGAACACCTTGTTGGGAGTGGGGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000341866.3 ENST00000667493.1 |
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| CDS CCA 90 bp | TTGAAACCAGCCTCTCCGGTGGCCACGACTTTGAGGACCATGGAATaGTTGCTGCAGACAGGCTTTCTTGAGATGGCAGTTGTGATTTCC | + |
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Preference number: 5 (lower is better) Translates to: LKPASPVATTLRTME*LLQTGFLEMAVVIS Trigger: GGAAATCACAACTGCCATCTCAAGAAAGCCTGTCTGCAGCAACCATTCCATGGTCCTCAAAGTCGTGGCCACCGGAGAGGCTGGTTTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS CCA 90 bp | GCTCCCCTGTGCCTTATTCTACCTGGTACATCGTCTCGACTCCCTTaGGGCTGTGTTTTTCGGAAGACATCAGTCTCACACAAACCCATC | + |
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Preference number: 5 (lower is better) Translates to: APLCLILPGTSSRLP*GCVFRKTSVSHKPI Trigger: GATGGGTTTGTGTGAGACTGATGTCTTCCGAAAAACACAGCCCCAAGGGAGTCGAGACGATGTACCAGGTAGAATAAGGCACAGGGGAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS TCA 90 bp | CCACGCCTGGAGTTAAAACAGATGCGCCATGTCAGGTGCCAAGGCTaGACTTTAAACAGCCTCAAGAACAGCACGTTGAAGTGCAGTGGT | + |
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Preference number: 5 (lower is better) Translates to: PRLELKQMRHVRCQG*TLNSLKNSTLKCSG Trigger: ACCACTGCACTTCAACGTGCTGTTCTTGAGGCTGTTTAAAGTTCAGCCTTGGCACCTGACATGGCGCATCTGTTTTAACTCCAGGCGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS TCA 90 bp | GCCCCTAAATCATTCCACGTATTGATCACAAAGAAAAGCGAACTGTaGCATCTCTTTGGTCACACCTCCGCTGGCTCACTCGTAATCCCG | + |
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Preference number: 5 (lower is better) Translates to: APKSFHVLITKKSEL*HLFGHTSAGSLVIP Trigger: CGGGATTACGAGTGAGCCAGCGGAGGTGTGACCAAAGAGATGTCACAGTTCGCTTTTCTTTGTGATCAATACGTGGAATGATTTAGGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS CCA 90 bp | CAACAAGGTGTTCCTGAGACCACCCCACAGACACTGATCCTTGTCTaGAATCTGCTTGTGGAGAAGCAAACCAGCAAAAGATATCACAGG | + |
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Preference number: 5 (lower is better) Translates to: QQGVPETTPQTLILV*NLLVEKQTSKRYHR Trigger: CCTGTGATATCTTTTGCTGGTTTGCTTCTCCACAAGCAGATTCCAGACAAGGATCAGTGTCTGTGGGGTGGTCTCAGGAACACCTTGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000341866.3 ENST00000667493.1 |
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| CDS TCA 90 bp | AGAGGAGGAAGGCAAAAGCTACTGTGGATGCAGTTCCTTGCTCTGTaGTTTGGAGCCTCTGAATGTGCCATCTCTGTTTATTTCGTAGGC | + |
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Preference number: 5 (lower is better) Translates to: RGGRQKLLWMQFLAL*FGASECAISVYFVG Trigger: GCCTACGAAATAAACAGAGATGGCACATTCAGAGGCTCCAAATCACAGAGCAAGGAACTGCATCCACAGTAGCTTTTGCCTTCCTCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS TCA 90 bp | CCATGGAATGGTTGCTGCAGACAGGCTTTCTTGAGATGGCAGTTGTaGTTTCCTTGGGACAGTCAAGTTCAGTGTTGCAGAATCATTACT | + |
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Preference number: 5 (lower is better) Translates to: PWNGCCRQAFLRWQL*FPWDSQVQCCRIIT Trigger: AGTAATGATTCTGCAACACTGAACTTGACTGTCCCAAGGAAATCACAACTGCCATCTCAAGAAAGCCTGTCTGCAGCAACCATTCCATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS GCA 90 bp | CTTCCTGGTGTTGGAAACAAATGCTCGGTGCCACAAAGAAGAACCTaGACTCAGACAAAAAGTTTTCTCGGCAAGGCAATTTACTTCTGC | + |
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Preference number: 5 (lower is better) Translates to: LPGVGNKCSVPQRRT*TQTKSFLGKAIYFC Trigger: GCAGAAGTAAATTGCCTTGCCGAGAAAACTTTTTGTCTGAGTGCAGGTTCTTCTTTGTGGCACCGAGCATTTGTTTCCAACACCAGGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000655798.1 ENST00000667493.1 |
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| CDS TCA 90 bp | TGGGACAGTCAAGTTCAGTGTTGCAGAATCATTACTGTGGTGCTGTaGTTCAGTCATTCGGATTGTTCCATAACTGTAACTCTGCCATGG | + |
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Preference number: 5 (lower is better) Translates to: WDSQVQCCRIITVVL*FSHSDCSITVTLPW Trigger: CCATGGCAGAGTTACAGTTATGGAACAATCCGAATGACTGAATCACAGCACCACAGTAATGATTCTGCAACACTGAACTTGACTGTCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341866.3 |
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| CDS CCA 72 bp | CCCGTGGAGAGCATCGGAGCGGCTGCGAAGGACCGGTaGAGAGCGGCAGAGAGGCAGGCCCCGGCATGGAAG | + |
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Preference number: 6 (lower is better) Translates to: PVESIGAAAKDR*RAAERQAPAWK Trigger: CTTCCATGCCGGGGCCTGCCTCTCTGCCGCTCTCCACCGGTCCTTCGCAGCCGCTCCGATGCTCTCCACGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS GCA 72 bp | CGGCTGCAAAGGACCCGTGGAGAGCATCGGAGCGGCTaGGAAGGACCGGTGGAGAGCGGCAGAGAGGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: RLQRTRGEHRSG*EGPVESGREAG Trigger: GCCTGCCTCTCTGCCGCTCTCCACCGGTCCTTCGCAGCCGCTCCGATGCTCTCCACGGGTCCTTTGCAGCCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS GCA 72 bp | GGCTTCTGTGTCACCGCCTCAGGGCCAGGACGCGGCTaGAAAGGACCCGTGGAGAGCATCGGAGCGGCTGCG | + |
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Preference number: 6 (lower is better) Translates to: GFCVTASGPGRG*KGPVESIGAAA Trigger: CGCAGCCGCTCCGATGCTCTCCACGGGTCCTTTGCAGCCGCGTCCTGGCCCTGAGGCGGTGACACAGAAGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS CCA 72 bp | GGCAGGCCCCGGCATGGAAGCCGCTCCTCGCTCAGCTaGGGGCTGAACCTGTGTCTGCAGCTGGGAGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: GRPRHGSRSSLS*GLNLCLQLGAL Trigger: CAGAGCTCCCAGCTGCAGACACAGGTTCAGCCCCCAGCTGAGCGAGGAGCGGCTTCCATGCCGGGGCCTGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS GCA 72 bp | AGGCGAGGGTCCCACAGGCACCCACTTCCTTCTCGGTaGTGGCTGGGCTTCTGCACAGTGACGGCCCGCCTC | + |
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Preference number: 6 (lower is better) Translates to: RRGSHRHPLPSR*WLGFCTVTARL Trigger: GAGGCGGGCCGTCACTGTGCAGAAGCCCAGCCAGCACCGAGAAGGAAGTGGGTGCCTGTGGGACCCTCGCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS CCA 72 bp | TCGGCCAGGTGGAGGCTGGGCCAGGCCCCAAAGCTGTaGGCGGCAGATGCTGCATCCACCTCCTCTGGCTTG | + |
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Preference number: 6 (lower is better) Translates to: SARWRLGQAPKL*AADAASTSSGL Trigger: CAAGCCAGAGGAGGTGGATGCAGCATCTGCCGCCCACAGCTTTGGGGCCTGGCCCAGCCTCCACCTGGCCGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341866.3 |
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| CDS GCA 72 bp | ACAACTCGCTGGCATCACCCGGGCAGGCAGGCCGGCTaGCGTCGTCTGATTTGTCAAGCGGCTCCCCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: TTRWHHPGRQAG*RRLICQAAPLC Trigger: GCACAGGGGAGCCGCTTGACAAATCAGACGACGGCAGCCGGCCTGCCTGCCCGGGTGATGCCAGCGAGTTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS CCA 72 bp | TGCACCATCTCAGGCTCTTCTGCACGCCCATGTGGGTaGGGTCGGGGTTGGGTGTCTCGGCCAGGTGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: CTISGSSARPCG*GRGWVSRPGGG Trigger: GCCTCCACCTGGCCGAGACACCCAACCCCGACCCCACCCACATGGGCGTGCAGAAGAGCCTGAGATGGTGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341866.3 |
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| CDS GCA 72 bp | AGGCACCCACTTCCTTCTCGGTGCTGGCTGGGCTTCTaGACAGTGACGGCCCGCCTCCCCTCTCTGGCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: RHPLPSRCWLGF*TVTARLPSLAE Trigger: TTCTGCCAGAGAGGGGAGGCGGGCCGTCACTGTGCAGAAGCCCAGCCAGCACCGAGAAGGAAGTGGGTGCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS CCA 72 bp | GCCACGTGCCCAGGGCTTGGCTCAGCCCTTCACAGGTaGATGGGCATTCGCAAACTGGAGCACGGCAGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: ATCPGLGSALHR*MGIRKLEHGSL Trigger: CAGGCTGCCGTGCTCCAGTTTGCGAATGCCCATCCACCTGTGAAGGGCTGAGCCAAGCCCTGGGCACGTGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341866.3 |
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| CDS CCA 72 bp | AGTGTGCACCATCTCAGGCTCTTCTGCACGCCCATGTaGGTGGGGTCGGGGTTGGGTGTCTCGGCCAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SVHHLRLFCTPM*VGSGLGVSARW Trigger: CCACCTGGCCGAGACACCCAACCCCGACCCCACCCACATGGGCGTGCAGAAGAGCCTGAGATGGTGCACACT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341866.3 |
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| CDS TCA 72 bp | CACTTCCTTCTCGGTGCTGGCTGGGCTTCTGCACAGTaGCGGCCCGCCTCCCCTCTCTGGCAGAAGAGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: HFLLGAGWASAQ*RPASPLWQKRG Trigger: TCCTCTCTTCTGCCAGAGAGGGGAGGCGGGCCGTCACTGTGCAGAAGCCCAGCCAGCACCGAGAAGGAAGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS TCA 72 bp | GTTCTCTGCAGTCAGGACGTGGCAGCGCCCGCCTCCTaGATCACTCCCGCTGGGGTTCTCTCTGGCAACGCA | + |
|
Preference number: 6 (lower is better) Translates to: VLCSQDVAAPAS*ITPAGVLSGNA Trigger: TGCGTTGCCAGAGAGAACCCCAGCGGGAGTGATTCAGGAGGCGGGCGCTGCCACGTCCTGACTGCAGAGAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341866.3 ENST00000667493.1 |
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| CDS TCA 72 bp | GGCATCACCCGGGCAGGCAGGCCGGCTGCCGTCGTCTaGTTTGTCAAGCGGCTCCCCTGTGCCTTATTCTAC | + |
|
Preference number: 6 (lower is better) Translates to: GITRAGRPAAVV*FVKRLPCALFY Trigger: GTAGAATAAGGCACAGGGGAGCCGCTTGACAAATCAGACGACGGCAGCCGGCCTGCCTGCCCGGGTGATGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS TCA 72 bp | GTTCTCTGCAGTCAGGACGTGGCAGCGCCCGCCTCCTaGATCACTCCCGCTGGGGTTCTCTTCCCACGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: VLCSQDVAAPAS*ITPAGVLFPRE Trigger: CTCACGTGGGAAGAGAACCCCAGCGGGAGTGATTCAGGAGGCGGGCGCTGCCACGTCCTGACTGCAGAGAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655798.1 |
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| CDS GCA 72 bp | GAGGCTGGGCCAGGCCCCAAAGCTGTGGGCGGCAGATaGTGCATCCACCTCCTCTGGCTTGGATCTAGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: EAGPGPKAVGGR*CIHLLWLGSRS Trigger: GCTTCTAGATCCAAGCCAGAGGAGGTGGATGCAGCATCTGCCGCCCACAGCTTTGGGGCCTGGCCCAGCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341866.3 |
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| CDS CCA 72 bp | CCGCTGCCTTCCTCCTCAACTCTCTCCAGCCGGAGTTaGGGGCGAATTGAAACCAGCCTCTCCGGTGGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: PLPSSSTLSSRS*GRIETSLSGGH Trigger: GTGGCCACCGGAGAGGCTGGTTTCAATTCGCCCCCAACTCCGGCTGGAGAGAGTTGAGGAGGAAGGCAGCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS CCA 72 bp | GGACGTGGCAGCGCCCGCCTCCTGAATCACTCCCGCTaGGGTTCTCTCTGGCAACGCAAAGCACAGCACAGA | + |
|
Preference number: 6 (lower is better) Translates to: GRGSARLLNHSR*GSLWQRKAQHR Trigger: TCTGTGCTGTGCTTTGCGTTGCCAGAGAGAACCCCAGCGGGAGTGATTCAGGAGGCGGGCGCTGCCACGTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000341866.3 ENST00000667493.1 |
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| CDS CAA 72 bp | TCACCCGGGCAGGCAGGCCGGCTGCCGTCGTCTGATTaGTCAAGCGGCTCCCCTGTGCCTTATTCTACCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SPGQAGRLPSSD*SSGSPVPYSTW Trigger: CCAGGTAGAATAAGGCACAGGGGAGCCGCTTGACAAATCAGACGACGGCAGCCGGCCTGCCTGCCCGGGTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS CAA 90 bp | TCGCTGGCATCACCCGGGCAGGCAGGCCGGCTGCCGTCGTCTGATTaGTCAAGCGGCTCCCCTGTGCCTTATTCTACCTGGTACATCGTC | + |
|
Preference number: 6 (lower is better) Translates to: SLASPGQAGRLPSSD*SSGSPVPYSTWYIV Trigger: GACGATGTACCAGGTAGAATAAGGCACAGGGGAGCCGCTTGACAAATCAGACGACGGCAGCCGGCCTGCCTGCCCGGGTGATGCCAGCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS CAA 90 bp | GGCAGTGTCTGGAGGACACTCTGGTTGTCACCCCTGAGGAGGGGGTaGCTGCTGGCTTCGCATGAGTGGAAGCCGGCCATGCAGCTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: GSVWRTLWLSPLRRG*LLASHEWKPAMQLN Trigger: GTTGAGCTGCATGGCCGGCTTCCACTCATGCGAAGCCAGCAGCAACCCCCTCCTCAGGGGTGACAACCAGAGTGTCCTCCAGACACTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS GCA 72 bp | GCTGGGCCAGGCCCCAAAGCTGTGGGCGGCAGATGCTaGATCCACCTCCTCTGGCTTGGATCTAGAAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: AGPGPKAVGGRC*IHLLWLGSRSF Trigger: GAAGCTTCTAGATCCAAGCCAGAGGAGGTGGATGCAGCATCTGCCGCCCACAGCTTTGGGGCCTGGCCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341866.3 |
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| CDS GCA 72 bp | CTCAACATTCTGCCACTGCAGCCTGGCATCCCCTGCTaGCAGGAACCACGCAGAGAGGCACTGCTCCACGTG | + |
|
Preference number: 6 (lower is better) Translates to: LNILPLQPGIPC*QEPRREALLHV Trigger: CACGTGGAGCAGTGCCTCTCTGCGTGGTTCCTGGCAGCAGGGGATGCCAGGCTGCAGTGGCAGAATGTTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS GCA 72 bp | CAGCTCAACATTCTGCCACTGCAGCCTGGCATCCCCTaGTGCCAGGAACCACGCAGAGAGGCACTGCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: QLNILPLQPGIP*CQEPRREALLH Trigger: GTGGAGCAGTGCCTCTCTGCGTGGTTCCTGGCAGCAGGGGATGCCAGGCTGCAGTGGCAGAATGTTGAGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS CCA 72 bp | CGTGCCCAGGGCTTGGCTCAGCCCTTCACAGGTGGATaGGCATTCGCAAACTGGAGCACGGCAGCCTGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: RAQGLAQPFTGG*AFANWSTAACH Trigger: ATGACAGGCTGCCGTGCTCCAGTTTGCGAATGCCCATCCACCTGTGAAGGGCTGAGCCAAGCCCTGGGCACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341866.3 |
||
| CDS CCA 72 bp | GCCCGCCTCCTGAATCACTCCCGCTGGGGTTCTCTCTaGCAACGCAAAGCACAGCACAGAAGCAGGACGAGG | + |
|
Preference number: 6 (lower is better) Translates to: ARLLNHSRWGSL*QRKAQHRSRTR Trigger: CCTCGTCCTGCTTCTGTGCTGTGCTTTGCGTTGCCAGAGAGAACCCCAGCGGGAGTGATTCAGGAGGCGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341866.3 ENST00000667493.1 |
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| CDS GCA 72 bp | GGTTGCTGCTGGCTTCGCATGAGTGGAAGCCGGCCATaGAGCTCAACATTCTGCCACTGCAGCCTGGCATCC | + |
|
Preference number: 6 (lower is better) Translates to: GCCWLRMSGSRP*SSTFCHCSLAS Trigger: GGATGCCAGGCTGCAGTGGCAGAATGTTGAGCTGCATGGCCGGCTTCCACTCATGCGAAGCCAGCAGCAACC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
||
| CDS CCA 72 bp | CCACCTACAAACAGGCAAGCAGAAAGGAAACGGACGTaGGCTTCTGTGTCACCGCCTCAGGGCCAGGACGCG | + |
|
Preference number: 6 (lower is better) Translates to: PPTNRQAERKRT*ASVSPPQGQDA Trigger: CGCGTCCTGGCCCTGAGGCGGTGACACAGAAGCCCACGTCCGTTTCCTTTCTGCTTGCCTGTTTGTAGGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000341866.3 ENST00000667493.1 |
||
| CDS CAA 72 bp | CCTCCTCAACTCTCTCCAGCCGGAGTTGGGGGCGAATaGAAACCAGCCTCTCCGGTGGCCACGACTTTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: PPQLSPAGVGGE*KPASPVATTLR Trigger: CCTCAAAGTCGTGGCCACCGGAGAGGCTGGTTTCAATTCGCCCCCAACTCCGGCTGGAGAGAGTTGAGGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS CAA 90 bp | CGCTGCCTTCCTCCTCAACTCTCTCCAGCCGGAGTTGGGGGCGAATaGAAACCAGCCTCTCCGGTGGCCACGACTTTGAGGACCATGGAA | + |
|
Preference number: 6 (lower is better) Translates to: RCLPPQLSPAGVGGE*KPASPVATTLRTME Trigger: TTCCATGGTCCTCAAAGTCGTGGCCACCGGAGAGGCTGGTTTCAATTCGCCCCCAACTCCGGCTGGAGAGAGTTGAGGAGGAAGGCAGCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS CCA 72 bp | GCTGCCAGGAACCACGCAGAGAGGCACTGCTCCACGTaGAAACCTGGAAGGAAGGCTTCCTTCGTCTCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: AARNHAERHCST*KPGRKASFVSQ Trigger: CTGAGAGACGAAGGAAGCCTTCCTTCCAGGTTTCCACGTGGAGCAGTGCCTCTCTGCGTGGTTCCTGGCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS CAA 72 bp | GAATTGACACAGGAGATGAAGCCACGTGCCCAGGGCTaGGCTCAGCCCTTCACAGGTGGATGGGCATTCGCA | + |
|
Preference number: 6 (lower is better) Translates to: ELTQEMKPRAQG*AQPFTGGWAFA Trigger: TGCGAATGCCCATCCACCTGTGAAGGGCTGAGCCAAGCCCTGGGCACGTGGCTTCATCTCCTGTGTCAATTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341866.3 |
||
| CDS CAA 90 bp | GCCCCAAAGCTGTGGGCGGCAGATGCTGCATCCACCTCCTCTGGCTaGGATCTAGAAGCTTCCTCCTCTCTCTTCCTCTTGCCTGAATTG | + |
|
Preference number: 6 (lower is better) Translates to: APKLWAADAASTSSG*DLEASSSLFLLPEL Trigger: CAATTCAGGCAAGAGGAAGAGAGAGGAGGAAGCTTCTAGATCCAAGCCAGAGGAGGTGGATGCAGCATCTGCCGCCCACAGCTTTGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000341866.3 |
||
| CDS GCA 72 bp | GGCTGCCGTCGTCTGATTTGTCAAGCGGCTCCCCTGTaGCTTATTCTACCTGGTACATCGTCTCGACTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: GCRRLICQAAPL*LILPGTSSRLP Trigger: AGGGAGTCGAGACGATGTACCAGGTAGAATAAGGCACAGGGGAGCCGCTTGACAAATCAGACGACGGCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS CAA 90 bp | GGAGTTGGGGGCGAATTGAAACCAGCCTCTCCGGTGGCCACGACTTaGAGGACCATGGAATGGTTGCTGCAGACAGGCTTTCTTGAGATG | + |
|
Preference number: 6 (lower is better) Translates to: GVGGELKPASPVATT*RTMEWLLQTGFLEM Trigger: CATCTCAAGAAAGCCTGTCTGCAGCAACCATTCCATGGTCCTCAAAGTCGTGGCCACCGGAGAGGCTGGTTTCAATTCGCCCCCAACTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS CCA 72 bp | GCCTCTCCGGTGGCCACGACTTTGAGGACCATGGAATaGTTGCTGCAGACAGGCTTTCTTGAGATGGCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: ASPVATTLRTME*LLQTGFLEMAV Trigger: AACTGCCATCTCAAGAAAGCCTGTCTGCAGCAACCATTCCATGGTCCTCAAAGTCGTGGCCACCGGAGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS CCA 72 bp | AAGCGAACTGTGACATCTCTTTGGTCACACCTCCGCTaGCTCACTCGTAATCCCGGGGATGCGGCTGTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: KRTVTSLWSHLR*LTRNPGDAAVL Trigger: CAAAACAGCCGCATCCCCGGGATTACGAGTGAGCCAGCGGAGGTGTGACCAAAGAGATGTCACAGTTCGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS CAA 72 bp | GGCGAATTGAAACCAGCCTCTCCGGTGGCCACGACTTaGAGGACCATGGAATGGTTGCTGCAGACAGGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: GELKPASPVATT*RTMEWLLQTGF Trigger: AAAGCCTGTCTGCAGCAACCATTCCATGGTCCTCAAAGTCGTGGCCACCGGAGAGGCTGGTTTCAATTCGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS CCA 72 bp | GATTTGTCAAGCGGCTCCCCTGTGCCTTATTCTACCTaGTACATCGTCTCGACTCCCTTGGGGCTGTGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: DLSSGSPVPYST*YIVSTPLGLCF Trigger: AAAACACAGCCCCAAGGGAGTCGAGACGATGTACCAGGTAGAATAAGGCACAGGGGAGCCGCTTGACAAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS TCA 72 bp | CCCAACAAGGTGTTCCTGAGACCACCCCACAGACACTaGTCCTTGTCTGGAATCTGCTTGTGGAGAAGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: PNKVFLRPPHRH*SLSGICLWRSK Trigger: TTTGCTTCTCCACAAGCAGATTCCAGACAAGGATCAGTGTCTGTGGGGTGGTCTCAGGAACACCTTGTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000341866.3 ENST00000667493.1 |
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| CDS TCA 72 bp | TCCCACGTGAGCAACCGAGAGACTAGAAGGAGAATATaGTCCACAGCATGTGCCCTTCCACTCAGATTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: SHVSNRETRRRI*STACALPLRFQ Trigger: TTGGAATCTGAGTGGAAGGGCACATGCTGTGGATCATATTCTCCTTCTAGTCTCTCGGTTGCTCACGTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS TCA 72 bp | AAGGACAAGGTCCCACAGCTCCTACTTACTCCCACGTaGGCAACCGAGAGACTAGAAGGAGAATATGATCCA | + |
|
Preference number: 6 (lower is better) Translates to: KDKVPQLLLTPT*ATERLEGEYDP Trigger: TGGATCATATTCTCCTTCTAGTCTCTCGGTTGCTCACGTGGGAGTAAGTAGGAGCTGTGGGACCTTGTCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000341866.3 ENST00000667493.1 |
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| CDS GCA 72 bp | CGGGCTGGCTTCCTGGTGTTGGAAACAAATGCTCGGTaGCACAAAGAAGAACCTGCACTCAGACAAAAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: RAGFLVLETNAR*HKEEPALRQKV Trigger: AACTTTTTGTCTGAGTGCAGGTTCTTCTTTGTGGCACCGAGCATTTGTTTCCAACACCAGGAAGCCAGCCCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000655798.1 ENST00000667493.1 |
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| CDS CAA 72 bp | GTGCCTTATTCTACCTGGTACATCGTCTCGACTCCCTaGGGGCTGTGTTTTTCGGAAGACATCAGTCTCACA | + |
|
Preference number: 6 (lower is better) Translates to: VPYSTWYIVSTP*GLCFSEDISLT Trigger: TGTGAGACTGATGTCTTCCGAAAAACACAGCCCCAAGGGAGTCGAGACGATGTACCAGGTAGAATAAGGCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS CAA 90 bp | ACAGCGGCAGAGGAGGAAGGCAAAAGCTACTGTGGATGCAGTTCCTaGCTCTGTGATTTGGAGCCTCTGAATGTGCCATCTCTGTTTATT | + |
|
Preference number: 6 (lower is better) Translates to: TAAEEEGKSYCGCSS*LCDLEPLNVPSLFI Trigger: AATAAACAGAGATGGCACATTCAGAGGCTCCAAATCACAGAGCAAGGAACTGCATCCACAGTAGCTTTTGCCTTCCTCCTCTGCCGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS CAA 90 bp | TGGTTGCTGCAGACAGGCTTTCTTGAGATGGCAGTTGTGATTTCCTaGGGACAGTCAAGTTCAGTGTTGCAGAATCATTACTGTGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: WLLQTGFLEMAVVIS*GQSSSVLQNHYCGA Trigger: AGCACCACAGTAATGATTCTGCAACACTGAACTTGACTGTCCCAAGGAAATCACAACTGCCATCTCAAGAAAGCCTGTCTGCAGCAACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS TCA 72 bp | TCATTCCACGTATTGATCACAAAGAAAAGCGAACTGTaGCATCTCTTTGGTCACACCTCCGCTGGCTCACTC | + |
|
Preference number: 6 (lower is better) Translates to: SFHVLITKKSEL*HLFGHTSAGSL Trigger: GAGTGAGCCAGCGGAGGTGTGACCAAAGAGATGTCACAGTTCGCTTTTCTTTGTGATCAATACGTGGAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
||
| CDS TCA 72 bp | GAGTTAAAACAGATGCGCCATGTCAGGTGCCAAGGCTaGACTTTAAACAGCCTCAAGAACAGCACGTTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: ELKQMRHVRCQG*TLNSLKNSTLK Trigger: CTTCAACGTGCTGTTCTTGAGGCTGTTTAAAGTTCAGCCTTGGCACCTGACATGGCGCATCTGTTTTAACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
||
| CDS CAA 90 bp | CTTGAGATGGCAGTTGTGATTTCCTTGGGACAGTCAAGTTCAGTGTaGCAGAATCATTACTGTGGTGCTGTGATTCAGTCATTCGGATTG | + |
|
Preference number: 6 (lower is better) Translates to: LEMAVVISLGQSSSV*QNHYCGAVIQSFGL Trigger: CAATCCGAATGACTGAATCACAGCACCACAGTAATGATTCTGCAACACTGAACTTGACTGTCCCAAGGAAATCACAACTGCCATCTCAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
||
| CDS GCA 72 bp | CATGCGAAGGCAGAAGGACTTCAAATTCTTCCAACCTaGCTTACAGATCTCCTTAAGGAAAAGTTGAAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: HAKAEGLQILPT*LTDLLKEKLKG Trigger: TCCCTTCAACTTTTCCTTAAGGAGATCTGTAAGGCAGGTTGGAAGAATTTGAAGTCCTTCTGCCTTCGCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS CAA 90 bp | ACAGATCTCCTTAAGGAAAAGTTGAAGGGATGTGTTCTTTCCCTCTaGGTATCGTTTAGAAGTAACAATGGTTGTTGCCTCCAGGACTTC | + |
|
Preference number: 6 (lower is better) Translates to: TDLLKEKLKGCVLSL*VSFRSNNGCCLQDF Trigger: GAAGTCCTGGAGGCAACAACCATTGTTACTTCTAAACGATACCAAGAGGGAAAGAACACATCCCTTCAACTTTTCCTTAAGGAGATCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
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| CDS GCA 72 bp | GTGATTTTAGGGCAATTATTTTATACAGCTGTTGATTaGTCTGTGTTAGGGAGGAAGAGAGAGGCCATTCGA | + |
|
Preference number: 6 (lower is better) Translates to: VILGQLFYTAVD*SVLGRKREAIR Trigger: TCGAATGGCCTCTCTCTTCCTCCCTAACACAGAGCAATCAACAGCTGTATAAAATAATTGCCCTAAAATCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341866.3 |
||
| CDS CAA 90 bp | CTTCAAATTCTTCCAACCTGCCTTACAGATCTCCTTAAGGAAAAGTaGAAGGGATGTGTTCTTTCCCTCTTGGTATCGTTTAGAAGTAAC | + |
|
Preference number: 6 (lower is better) Translates to: LQILPTCLTDLLKEK*KGCVLSLLVSFRSN Trigger: GTTACTTCTAAACGATACCAAGAGGGAAAGAACACATCCCTTCAACTTTTCCTTAAGGAGATCTGTAAGGCAGGTTGGAAGAATTTGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
||
| CDS TCA 72 bp | CAAGTTCAGTGTTGCAGAATCATTACTGTGGTGCTGTaGTTCAGTCATTCGGATTGTTCCATAACTGTAACT | + |
|
Preference number: 6 (lower is better) Translates to: QVQCCRIITVVL*FSHSDCSITVT Trigger: AGTTACAGTTATGGAACAATCCGAATGACTGAATCACAGCACCACAGTAATGATTCTGCAACACTGAACTTG 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000341866.3 |
||
| CDS CAA 72 bp | CTTAAGGAAAAGTTGAAGGGATGTGTTCTTTCCCTCTaGGTATCGTTTAGAAGTAACAATGGTTGTTGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LKEKLKGCVLSL*VSFRSNNGCCL Trigger: GAGGCAACAACCATTGTTACTTCTAAACGATACCAAGAGGGAAAGAACACATCCCTTCAACTTTTCCTTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000341866.3 ENST00000655798.1 ENST00000667493.1 |
||
| CDS TCA 72 bp | ATTTGTGATTTTAGGGCAATTATTTTATACAGCTGTTaGTTGCTCTGTGTTAGGGAGGAAGAGAGAGGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: ICDFRAIILYSC*LLCVREEERGH Trigger: ATGGCCTCTCTCTTCCTCCCTAACACAGAGCAATCAACAGCTGTATAAAATAATTGCCCTAAAATCACAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000341866.3 |
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