Pregenerated sensors for LINC01159 (Homo sapiens)
Ensembl gene IDs: ENSG00000229743Ensembl transcript IDs: ENST00000433433.1, ENST00000434764.1, ENST00000454183.1, ENST00000651283.1, ENST00000653517.1
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CACACCTTGCAGGCGTGTCCCCAGCTCCCGGGACGCAGAGCCCGCTaGCTGTTCCCCCGGGCTCCGCAGACGTGCCCGGGTTGTCAGAGG | + |
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Preference number: 5 (lower is better) Translates to: HTLQACPQLPGRRAR*LFPRAPQTCPGCQR Trigger: CCTCTGACAACCCGGGCACGTCTGCGGAGCCCGGGGGAACAGTCAGCGGGCTCTGCGTCCCGGGAGCTGGGGACACGCCTGCAAGGTGTG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS GCA 90 bp | AGCCGGGAGCTGGTGGGGTTGGCAGGGCGTCTGAGTCACCCGAGCTaGAGAACGGACGCCCCCACGACGCGCTGTGGGCACTCACAGCGG | + |
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Preference number: 5 (lower is better) Translates to: SRELVGLAGRLSHPS*RTDAPTTRCGHSQR Trigger: CCGCTGTGAGTGCCCACAGCGCGTCGTGGGGGCGTCCGTTCTGCAGCTCGGGTGACTCAGACGCCCTGCCAACCCCACCAGCTCCCGGCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS CCA 90 bp | ACTGTTCCCCCGGGCTCCGCAGACGTGCCCGGGTTGTCAGAGGTGTaGGGCTGGAAGTCCAGCGTCTCGGCCTCTGCCCCTGCGCTCCCA | + |
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Preference number: 5 (lower is better) Translates to: TVPPGSADVPGLSEV*GWKSSVSASAPALP Trigger: TGGGAGCGCAGGGGCAGAGGCCGAGACGCTGGACTTCCAGCCCCACACCTCTGACAACCCGGGCACGTCTGCGGAGCCCGGGGGAACAGT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS GCA 90 bp | CCGGCGCAGCTCCTACAGGCGTCTAGGAGTTGGTGGGAGAGGCGCTaGTCTGGCACCTCGCGGTCTCAGGAGTGGGGCTCAGCGCAGAGC | + |
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Preference number: 5 (lower is better) Translates to: PAQLLQASRSWWERR*SGTSRSQEWGSAQS Trigger: GCTCTGCGCTGAGCCCCACTCCTGAGACCGCGAGGTGCCAGAGCAGCGCCTCTCCCACCAACTCCTAGACGCCTGTAGGAGCTGCGCCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000433433.1 ENST00000651283.1 |
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| CDS TCA 90 bp | AAGAGCGTTCGAGAAGCCGGGAGCTGGTGGGGTTGGCAGGGCGTCTaGGTCACCCGAGCTGCAGAACGGACGCCCCCACGACGCGCTGTG | + |
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Preference number: 5 (lower is better) Translates to: KSVREAGSWWGWQGV*VTRAAERTPPRRAV Trigger: CACAGCGCGTCGTGGGGGCGTCCGTTCTGCAGCTCGGGTGACTCAGACGCCCTGCCAACCCCACCAGCTCCCGGCTTCTCGAACGCTCTT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS CCA 90 bp | CAGGCCCCGCCCTTGGTTAATCCGGGAAGGTCGCGGGCTGCAATCTaGCCTGACGAGGCAGGCCCTGAAGTCTCCCCGCTGGGCGATCAG | + |
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Preference number: 5 (lower is better) Translates to: QAPPLVNPGRSRAAI*PDEAGPEVSPLGDQ Trigger: CTGATCGCCCAGCGGGGAGACTTCAGGGCCTGCCTCGTCAGGCCAGATTGCAGCCCGCGACCTTCCCGGATTAACCAAGGGCGGGGCCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS CCA 90 bp | GTTCTGAAGGCTCCGGCGCAGCTCCTACAGGCGTCTAGGAGTTGGTaGGAGAGGCGCTGCTCTGGCACCTCGCGGTCTCAGGAGTGGGGC | + |
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Preference number: 5 (lower is better) Translates to: VLKAPAQLLQASRSW*ERRCSGTSRSQEWG Trigger: GCCCCACTCCTGAGACCGCGAGGTGCCAGAGCAGCGCCTCTCCCACCAACTCCTAGACGCCTGTAGGAGCTGCGCCGGAGCCTTCAGAAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000433433.1 ENST00000651283.1 |
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| CDS CCA 90 bp | CCCTCCTCTGTGCGCCCTGCTGTGCCCACCGCAGTCGCCCTGCGGTaGCAGGAGAGCTACTCATTCAGCAGTAGCAGCATTGCGCCGCTG | + |
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Preference number: 5 (lower is better) Translates to: PSSVRPAVPTAVALR*QESYSFSSSSIAPL Trigger: CAGCGGCGCAATGCTGCTACTGCTGAATGAGTAGCTCTCCTGCCACCGCAGGGCGACTGCGGTGGGCACAGCAGGGCGCACAGAGGAGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS CCA 90 bp | TCTGAGTCACCCGAGCTGCAGAACGGACGCCCCCACGACGCGCTGTaGGCACTCACAGCGGCTAGTTGGGCATTTCCCAGCAGCCAAGGC | + |
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Preference number: 5 (lower is better) Translates to: SESPELQNGRPHDAL*ALTAASWAFPSSQG Trigger: GCCTTGGCTGCTGGGAAATGCCCAACTAGCCGCTGTGAGTGCCCACAGCGCGTCGTGGGGGCGTCCGTTCTGCAGCTCGGGTGACTCAGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS CCA 90 bp | GGGCTGCAATCTGGCCTGACGAGGCAGGCCCTGAAGTCTCCCCGCTaGGCGATCAGAAGAGCGTTCGAGAAGCCGGGAGCTGGTGGGGTT | + |
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Preference number: 5 (lower is better) Translates to: GLQSGLTRQALKSPR*AIRRAFEKPGAGGV Trigger: AACCCCACCAGCTCCCGGCTTCTCGAACGCTCTTCTGATCGCCCAGCGGGGAGACTTCAGGGCCTGCCTCGTCAGGCCAGATTGCAGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS TCA 90 bp | CCAGGGTCAGCAGGGAATTTGCTTGAGGGGAGCCTCTGGGTCCTCTaGGTTCTCAGGGTGCCTCTTGGTGCCCCGGCACGGTCCTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: PGSAGNLLEGSLWVL*VLRVPLGAPARSFH Trigger: ATGGAAGGACCGTGCCGGGGCACCAAGAGGCACCCTGAGAACTCAGAGGACCCAGAGGCTCCCCTCAAGCAAATTCCCTGCTGACCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000434764.1 ENST00000653517.1 |
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| CDS GCA 90 bp | GGCCCGAGTTCAGGGCTAGGAGCAGGTGCAAGAACAGTGCAGCAGTaGAAGCATCAGGCAGCAGTGTTTCTCCTCCGCCGACAAAGTGGG | + |
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Preference number: 5 (lower is better) Translates to: GPSSGLGAGARTVQQ*KHQAAVFLLRRQSG Trigger: CCCACTTTGTCGGCGGAGGAGAAACACTGCTGCCTGATGCTTGCACTGCTGCACTGTTCTTGCACCTGCTCCTAGCCCTGAACTCGGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS GCA 90 bp | GCGGCAGTGAGGAGCTCAGGGCCCGAGTTCAGGGCTAGGAGCAGGTaGAAGAACAGTGCAGCAGTGCAAGCATCAGGCAGCAGTGTTTCT | + |
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Preference number: 5 (lower is better) Translates to: AAVRSSGPEFRARSR*KNSAAVQASGSSVS Trigger: AGAAACACTGCTGCCTGATGCTTGCACTGCTGCACTGTTCTTGCACCTGCTCCTAGCCCTGAACTCGGGCCCTGAGCTCCTCACTGCCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000433433.1 ENST00000651283.1 |
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| CDS TCA 90 bp | CGAGAAATCCTGCTTCCAACTGCGATTTCAGCTTTCTTATGGAAATaGACGCGACGGCCCGTTCGCCCCGAGCCTCCCTCCCGTTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: REILLPTAISAFLWK*TRRPVRPEPPSRSQ Trigger: CTGGGAACGGGAGGGAGGCTCGGGGCGAACGGGCCGTCGCGTTCATTTCCATAAGAAAGCTGAAATCGCAGTTGGAAGCAGGATTTCTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434764.1 |
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| CDS GCA 90 bp | GGTGGCAGGAGAGCTACTCATTCAGCAGTAGCAGCATTGCGCCGCTaGAGCATCCCGAGGTCACATTCAGAAAGCCCGTTCTTCCAGGAC | + |
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Preference number: 5 (lower is better) Translates to: GGRRATHSAVAALRR*SIPRSHSESPFFQD Trigger: GTCCTGGAAGAACGGGCTTTCTGAATGTGACCTCGGGATGCTGCAGCGGCGCAATGCTGCTACTGCTGAATGAGTAGCTCTCCTGCCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS CCA 90 bp | GGTGGGGGCAGTGGTACCCAAGACTACTGGGACCTGGCTGCCCTGTaGGGTAGTAGGAGCCAGGTTAGTTCACAACTGTGTCATCCTCAA | + |
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Preference number: 5 (lower is better) Translates to: GGGSGTQDYWDLAAL*GSRSQVSSQLCHPQ Trigger: TTGAGGATGACACAGTTGTGAACTAACCTGGCTCCTACTACCCCACAGGGCAGCCAGGTCCCAGTAGTCTTGGGTACCACTGCCCCCACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS GCA 90 bp | GGAGTCCTTGCTGGGAGTTATAAGATGAGCCTTGTGGCAGCCTCTTaGCCCCTCCTTCAAGGGGTGTCCAGGGTCAGCAGGGAATTTGCT | + |
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Preference number: 5 (lower is better) Translates to: GVLAGSYKMSLVAAS*PLLQGVSRVSREFA Trigger: AGCAAATTCCCTGCTGACCCTGGACACCCCTTGAAGGAGGGGGCAAGAGGCTGCCACAAGGCTCATCTTATAACTCCCAGCAAGGACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653517.1 |
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| CDS CCA 90 bp | TCAACATCATCAAAGACCAGAGCACACACTTCGGGCTCTGAGCTCTaGAGCCCGCTTCTTGCAGAAAACCGGGTATGGGGGAAGGGCTGC | + |
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Preference number: 5 (lower is better) Translates to: STSSKTRAHTSGSEL*SPLLAENRVWGKGC Trigger: GCAGCCCTTCCCCCATACCCGGTTTTCTGCAAGAAGCGGGCTCCAGAGCTCAGAGCCCGAAGTGTGTGCTCTGGTCTTTGATGATGTTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000433433.1 ENST00000434764.1 ENST00000653517.1 |
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| CDS CCA 90 bp | AATGGTGGTATGGTGGGGGCAGTGGTACCCAAGACTACTGGGACCTaGCTGCCCTGTGGGGTAGTAGGAGCCAGGTTAGTTCACAACTGT | + |
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Preference number: 5 (lower is better) Translates to: NGGMVGAVVPKTTGT*LPCGVVGARLVHNC Trigger: ACAGTTGTGAACTAACCTGGCTCCTACTACCCCACAGGGCAGCCAGGTCCCAGTAGTCTTGGGTACCACTGCCCCCACCATACCACCATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS CCA 90 bp | GCACGTTGGCTAAGCAGGAGTCCATACTTTACAATGGTGGTATGGTaGGGGCAGTGGTACCCAAGACTACTGGGACCTGGCTGCCCTGTG | + |
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Preference number: 5 (lower is better) Translates to: ARWLSRSPYFTMVVW*GQWYPRLLGPGCPV Trigger: CACAGGGCAGCCAGGTCCCAGTAGTCTTGGGTACCACTGCCCCCACCATACCACCATTGTAAAGTATGGACTCCTGCTTAGCCAACGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS CCA 90 bp | GCTGCACGTTGGCTAAGCAGGAGTCCATACTTTACAATGGTGGTATaGTGGGGGCAGTGGTACCCAAGACTACTGGGACCTGGCTGCCCT | + |
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Preference number: 5 (lower is better) Translates to: AARWLSRSPYFTMVV*WGQWYPRLLGPGCP Trigger: AGGGCAGCCAGGTCCCAGTAGTCTTGGGTACCACTGCCCCCACCATACCACCATTGTAAAGTATGGACTCCTGCTTAGCCAACGTGCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS GCA 90 bp | GGTGTTCTGATGAGCTTCCTGGGAGACCACACATTAGCTCTGTCCTaGAGGACTGCCTCTCCGCATAAGGCAAGCCCATTAAGTCGGCTG | + |
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Preference number: 5 (lower is better) Translates to: GVLMSFLGDHTLALS*RTASPHKASPLSRL Trigger: CAGCCGACTTAATGGGCTTGCCTTATGCGGAGAGGCAGTCCTGCAGGACAGAGCTAATGTGTGGTCTCCCAGGAAGCTCATCAGAACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000433433.1 ENST00000454183.1 ENST00000651283.1 |
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| CDS CCA 90 bp | ACTTTACAATGGTGGTATGGTGGGGGCAGTGGTACCCAAGACTACTaGGACCTGGCTGCCCTGTGGGGTAGTAGGAGCCAGGTTAGTTCA | + |
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Preference number: 5 (lower is better) Translates to: TLQWWYGGGSGTQDY*DLAALWGSRSQVSS Trigger: TGAACTAACCTGGCTCCTACTACCCCACAGGGCAGCCAGGTCCCAGTAGTCTTGGGTACCACTGCCCCCACCATACCACCATTGTAAAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS CCA 90 bp | TGTGTGCCAGAGCATCCTTCAGAGATCCTGCCTAGAGCTGCACGTTaGCTAAGCAGGAGTCCATACTTTACAATGGTGGTATGGTGGGGG | + |
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Preference number: 5 (lower is better) Translates to: CVPEHPSEILPRAAR*LSRSPYFTMVVWWG Trigger: CCCCCACCATACCACCATTGTAAAGTATGGACTCCTGCTTAGCCAACGTGCAGCTCTAGGCAGGATCTCTGAAGGATGCTCTGGCACACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS GCA 90 bp | CATGTAAGCTTGTGTGCAGGTAAAGTCATACCTGCACCATCTGTGTaGCAGAGCATCCTTCAGAGATCCTGCCTAGAGCTGCACGTTGGC | + |
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Preference number: 5 (lower is better) Translates to: HVSLCAGKVIPAPSV*QSILQRSCLELHVG Trigger: GCCAACGTGCAGCTCTAGGCAGGATCTCTGAAGGATGCTCTGGCACACAGATGGTGCAGGTATGACTTTACCTGCACACAAGCTTACATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS TCA 90 bp | CCATTCCACATACAGACAGGAAACCGGCCTCTTCGGGACAACATTTaGAACCACATTTTATCAACATCATCAAAGACCAGAGCACACACT | + |
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Preference number: 5 (lower is better) Translates to: PFHIQTGNRPLRDNI*NHILSTSSKTRAHT Trigger: AGTGTGTGCTCTGGTCTTTGATGATGTTGATAAAATGTGGTTTCAAATGTTGTCCCGAAGAGGCCGGTTTCCTGTCTGTATGTGGAATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000433433.1 ENST00000434764.1 ENST00000653517.1 |
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| CDS TCA 90 bp | ATGGAGTGTCTGTTCTTCTCTTTATGTCCATTTTCAAACAAGTTGTaGGTAGAGGAAGTCTGCCTCCAAATCTCACCAGACTCTCCCACC | + |
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Preference number: 5 (lower is better) Translates to: MECLFFSLCPFSNKL*VEEVCLQISPDSPT Trigger: GGTGGGAGAGTCTGGTGAGATTTGGAGGCAGACTTCCTCTACTCACAACTTGTTTGAAAATGGACATAAAGAGAAGAACAGACACTCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653517.1 |
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| CDS CCA 90 bp | AGGAATCCCAGTGTGAGTGTGTTACATAACATACAGAATCCTCTGTaGGGAGAAGTGCACTCACTTGATTTTCTCCAAATGACTGTGTGC | + |
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Preference number: 5 (lower is better) Translates to: RNPSVSVLHNIQNPL*GEVHSLDFLQMTVC Trigger: GCACACAGTCATTTGGAGAAAATCAAGTGAGTGCACTTCTCCCCACAGAGGATTCTGTATGTTATGTAACACACTCACACTGGGATTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000433433.1 ENST00000651283.1 |
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| CDS TCA 90 bp | TGGGGAGAAATCTTTCAAATTTCAAAATCGCTCAGGCAAGTCTACTaGTTCTACTTTGTACGCCTTAAAGACTTATGCCAAGCACAGCTT | + |
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Preference number: 5 (lower is better) Translates to: WGEIFQISKSLRQVY*FYFVRLKDLCQAQL Trigger: AAGCTGTGCTTGGCATAAGTCTTTAAGGCGTACAAAGTAGAATCAGTAGACTTGCCTGAGCGATTTTGAAATTTGAAAGATTTCTCCCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS TCA 72 bp | CAGGCGTGTCCCCAGCTCCCGGGACGCAGAGCCCGCTaGCTGTTCCCCCGGGCTCCGCAGACGTGCCCGGGT | + |
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Preference number: 6 (lower is better) Translates to: QACPQLPGRRAR*LFPRAPQTCPG Trigger: ACCCGGGCACGTCTGCGGAGCCCGGGGGAACAGTCAGCGGGCTCTGCGTCCCGGGAGCTGGGGACACGCCTG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS GCA 72 bp | CTGGTGGGGTTGGCAGGGCGTCTGAGTCACCCGAGCTaGAGAACGGACGCCCCCACGACGCGCTGTGGGCAC | + |
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Preference number: 6 (lower is better) Translates to: LVGLAGRLSHPS*RTDAPTTRCGH Trigger: GTGCCCACAGCGCGTCGTGGGGGCGTCCGTTCTGCAGCTCGGGTGACTCAGACGCCCTGCCAACCCCACCAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS GCA 72 bp | ATCTGGAAGAGGGCAGTTGATCCTGGGCAGATCCCCTaGGCCGGGCCCTCTCCGCTGGGGGCGAGCCCGGAG | + |
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Preference number: 6 (lower is better) Translates to: IWKRAVDPGQIP*AGPSPLGASPE Trigger: CTCCGGGCTCGCCCCCAGCGGAGAGGGCCCGGCGCAGGGGATCTGCCCAGGATCAACTGCCCTCTTCCAGAT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS CCA 72 bp | CCGGGCTCCGCAGACGTGCCCGGGTTGTCAGAGGTGTaGGGCTGGAAGTCCAGCGTCTCGGCCTCTGCCCCT | + |
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Preference number: 6 (lower is better) Translates to: PGSADVPGLSEV*GWKSSVSASAP Trigger: AGGGGCAGAGGCCGAGACGCTGGACTTCCAGCCCCACACCTCTGACAACCCGGGCACGTCTGCGGAGCCCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS CAA 90 bp | CAGAGCCCGCTGACTGTTCCCCCGGGCTCCGCAGACGTGCCCGGGTaGTCAGAGGTGTGGGGCTGGAAGTCCAGCGTCTCGGCCTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: QSPLTVPPGSADVPG*SEVWGWKSSVSASA Trigger: GGCAGAGGCCGAGACGCTGGACTTCCAGCCCCACACCTCTGACAACCCGGGCACGTCTGCGGAGCCCGGGGGAACAGTCAGCGGGCTCTG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS TCA 72 bp | CGAGAAGCCGGGAGCTGGTGGGGTTGGCAGGGCGTCTaGGTCACCCGAGCTGCAGAACGGACGCCCCCACGA | + |
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Preference number: 6 (lower is better) Translates to: REAGSWWGWQGV*VTRAAERTPPR Trigger: TCGTGGGGGCGTCCGTTCTGCAGCTCGGGTGACTCAGACGCCCTGCCAACCCCACCAGCTCCCGGCTTCTCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS CAA 90 bp | GCTGGGCGATCAGAAGAGCGTTCGAGAAGCCGGGAGCTGGTGGGGTaGGCAGGGCGTCTGAGTCACCCGAGCTGCAGAACGGACGCCCCC | + |
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Preference number: 6 (lower is better) Translates to: AGRSEERSRSRELVG*AGRLSHPSCRTDAP Trigger: GGGGGCGTCCGTTCTGCAGCTCGGGTGACTCAGACGCCCTGCCAACCCCACCAGCTCCCGGCTTCTCGAACGCTCTTCTGATCGCCCAGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS CCA 72 bp | GCTCCGGCGCAGCTCCTACAGGCGTCTAGGAGTTGGTaGGAGAGGCGCTGCTCTGGCACCTCGCGGTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: APAQLLQASRSW*ERRCSGTSRSQ Trigger: CTGAGACCGCGAGGTGCCAGAGCAGCGCCTCTCCCACCAACTCCTAGACGCCTGTAGGAGCTGCGCCGGAGC 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000433433.1 ENST00000651283.1 |
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| CDS CCA 72 bp | CCCCACGACGCGCTGTGGGCACTCACAGCGGCTAGTTaGGCATTTCCCAGCAGCCAAGGCTGCGCACTCCGC | + |
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Preference number: 6 (lower is better) Translates to: PHDALWALTAAS*AFPSSQGCALR Trigger: GCGGAGTGCGCAGCCTTGGCTGCTGGGAAATGCCCAACTAGCCGCTGTGAGTGCCCACAGCGCGTCGTGGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS CCA 72 bp | CCCGAGCTGCAGAACGGACGCCCCCACGACGCGCTGTaGGCACTCACAGCGGCTAGTTGGGCATTTCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: PELQNGRPHDAL*ALTAASWAFPS Trigger: GCTGGGAAATGCCCAACTAGCCGCTGTGAGTGCCCACAGCGCGTCGTGGGGGCGTCCGTTCTGCAGCTCGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS CAA 72 bp | CTGACTGTTCCCCCGGGCTCCGCAGACGTGCCCGGGTaGTCAGAGGTGTGGGGCTGGAAGTCCAGCGTCTCG | + |
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Preference number: 6 (lower is better) Translates to: LTVPPGSADVPG*SEVWGWKSSVS Trigger: CGAGACGCTGGACTTCCAGCCCCACACCTCTGACAACCCGGGCACGTCTGCGGAGCCCGGGGGAACAGTCAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS GCA 72 bp | CTCCTACAGGCGTCTAGGAGTTGGTGGGAGAGGCGCTaGTCTGGCACCTCGCGGTCTCAGGAGTGGGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: LLQASRSWWERR*SGTSRSQEWGS Trigger: TGAGCCCCACTCCTGAGACCGCGAGGTGCCAGAGCAGCGCCTCTCCCACCAACTCCTAGACGCCTGTAGGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000433433.1 ENST00000651283.1 |
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| CDS CCA 72 bp | CTGGGCCCCGACCTCCAGCTGGTGGGTAGGAATTGTTaGGAAAGGATTGGCGCCCCAGCACCGGGAGACTGG | + |
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Preference number: 6 (lower is better) Translates to: LGPDLQLVGRNC*ERIGAPAPGDW Trigger: CCAGTCTCCCGGTGCTGGGGCGCCAATCCTTTCCCAACAATTCCTACCCACCAGCTGGAGGTCGGGGCCCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS CCA 72 bp | TCTGGCCTGACGAGGCAGGCCCTGAAGTCTCCCCGCTaGGCGATCAGAAGAGCGTTCGAGAAGCCGGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: SGLTRQALKSPR*AIRRAFEKPGA Trigger: AGCTCCCGGCTTCTCGAACGCTCTTCTGATCGCCCAGCGGGGAGACTTCAGGGCCTGCCTCGTCAGGCCAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS CCA 72 bp | CCCTTGGTTAATCCGGGAAGGTCGCGGGCTGCAATCTaGCCTGACGAGGCAGGCCCTGAAGTCTCCCCGCTG | + |
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Preference number: 6 (lower is better) Translates to: PLVNPGRSRAAI*PDEAGPEVSPL Trigger: CAGCGGGGAGACTTCAGGGCCTGCCTCGTCAGGCCAGATTGCAGCCCGCGACCTTCCCGGATTAACCAAGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS CAA 90 bp | GAGGCTCAGTTAGGCAGCAGCCTTGCTGGGCAACAGGCCCCGCCCTaGGTTAATCCGGGAAGGTCGCGGGCTGCAATCTGGCCTGACGAG | + |
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Preference number: 6 (lower is better) Translates to: EAQLGSSLAGQQAPP*VNPGRSRAAIWPDE Trigger: CTCGTCAGGCCAGATTGCAGCCCGCGACCTTCCCGGATTAACCAAGGGCGGGGCCTGTTGCCCAGCAAGGCTGCTGCCTAACTGAGCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS TCA 72 bp | GCAGGGAATTTGCTTGAGGGGAGCCTCTGGGTCCTCTaGGTTCTCAGGGTGCCTCTTGGTGCCCCGGCACGG | + |
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Preference number: 6 (lower is better) Translates to: AGNLLEGSLWVL*VLRVPLGAPAR Trigger: CCGTGCCGGGGCACCAAGAGGCACCCTGAGAACTCAGAGGACCCAGAGGCTCCCCTCAAGCAAATTCCCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000434764.1 ENST00000653517.1 |
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| CDS GCA 72 bp | AAGGCACGGAGCAGCCTGCACCTGAAACGGGCTTTCTaGTTTTCGGTGAGGAGGGGCGGCCGAGGTCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: KARSSLHLKRAF*FSVRRGGRGQQ Trigger: CTGCTGACCTCGGCCGCCCCTCCTCACCGAAAAGCAGAAAGCCCGTTTCAGGTGCAGGCTGCTCCGTGCCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS CCA 72 bp | GTGCGCCCTGCTGTGCCCACCGCAGTCGCCCTGCGGTaGCAGGAGAGCTACTCATTCAGCAGTAGCAGCATT | + |
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Preference number: 6 (lower is better) Translates to: VRPAVPTAVALR*QESYSFSSSSI Trigger: AATGCTGCTACTGCTGAATGAGTAGCTCTCCTGCCACCGCAGGGCGACTGCGGTGGGCACAGCAGGGCGCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS CAA 72 bp | TTAGGCAGCAGCCTTGCTGGGCAACAGGCCCCGCCCTaGGTTAATCCGGGAAGGTCGCGGGCTGCAATCTGG | + |
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Preference number: 6 (lower is better) Translates to: LGSSLAGQQAPP*VNPGRSRAAIW Trigger: CCAGATTGCAGCCCGCGACCTTCCCGGATTAACCAAGGGCGGGGCCTGTTGCCCAGCAAGGCTGCTGCCTAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS TCA 72 bp | AAGAATCTCGCAGAAGGGGATCTGGAAGAGGGCAGTTaGTCCTGGGCAGATCCCCTGCGCCGGGCCCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: KNLAEGDLEEGS*SWADPLRRALS Trigger: GGAGAGGGCCCGGCGCAGGGGATCTGCCCAGGATCAACTGCCCTCTTCCAGATCCCCTTCTGCGAGATTCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS CCA 72 bp | TGGTGGTATGGTGGGGGCAGTGGTACCCAAGACTACTaGGACCTGGCTGCCCTGTGGGGTAGTAGGAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: WWYGGGSGTQDY*DLAALWGSRSQ Trigger: CTGGCTCCTACTACCCCACAGGGCAGCCAGGTCCCAGTAGTCTTGGGTACCACTGCCCCCACCATACCACCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS CAA 72 bp | CACACACTTCGGGCTCTGAGCTCTGGAGCCCGCTTCTaGCAGAAAACCGGGTATGGGGGAAGGGCTGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: HTLRALSSGARF*QKTGYGGRAAG Trigger: CCCTGCAGCCCTTCCCCCATACCCGGTTTTCTGCAAGAAGCGGGCTCCAGAGCTCAGAGCCCGAAGTGTGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000433433.1 ENST00000434764.1 ENST00000653517.1 |
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| CDS GCA 72 bp | AGGAGCTCAGGGCCCGAGTTCAGGGCTAGGAGCAGGTaGAAGAACAGTGCAGCAGTGCAAGCATCAGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: RSSGPEFRARSR*KNSAAVQASGS Trigger: GCTGCCTGATGCTTGCACTGCTGCACTGTTCTTGCACCTGCTCCTAGCCCTGAACTCGGGCCCTGAGCTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000433433.1 ENST00000651283.1 |
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| CDS CAA 72 bp | AAAGAATCTCGCAGAAGGGGATCTGGAAGAGGGCAGTaGATCCTGGGCAGATCCCCTGCGCCGGGCCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: KESRRRGSGRGQ*ILGRSPAPGPL Trigger: GAGAGGGCCCGGCGCAGGGGATCTGCCCAGGATCAACTGCCCTCTTCCAGATCCCCTTCTGCGAGATTCTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS CAA 90 bp | TCGCCCTGCGGTGGCAGGAGAGCTACTCATTCAGCAGTAGCAGCATaGCGCCGCTGCAGCATCCCGAGGTCACATTCAGAAAGCCCGTTC | + |
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Preference number: 6 (lower is better) Translates to: SPCGGRRATHSAVAA*RRCSIPRSHSESPF Trigger: GAACGGGCTTTCTGAATGTGACCTCGGGATGCTGCAGCGGCGCAATGCTGCTACTGCTGAATGAGTAGCTCTCCTGCCACCGCAGGGCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS GCA 72 bp | GCTGGGAGTTATAAGATGAGCCTTGTGGCAGCCTCTTaGCCCCTCCTTCAAGGGGTGTCCAGGGTCAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: AGSYKMSLVAAS*PLLQGVSRVSR Trigger: CCTGCTGACCCTGGACACCCCTTGAAGGAGGGGGCAAGAGGCTGCCACAAGGCTCATCTTATAACTCCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653517.1 |
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| CDS CCA 72 bp | GCATCAGGCAGCAGTGTTTCTCCTCCGCCGACAAAGTaGGTGGTGAGAACACAACTCCGGCACGGTCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: ASGSSVSPPPTK*VVRTQLRHGPS Trigger: GGAAGGACCGTGCCGGAGTTGTGTTCTCACCACCCACTTTGTCGGCGGAGGAGAAACACTGCTGCCTGATGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS CAA 72 bp | CCTTCAAGGGGTGTCCAGGGTCAGCAGGGAATTTGCTaGAGGGGAGCCTCTGGGTCCTCTGAGTTCTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: PSRGVQGQQGIC*RGASGSSEFSG Trigger: CCCTGAGAACTCAGAGGACCCAGAGGCTCCCCTCAAGCAAATTCCCTGCTGACCCTGGACACCCCTTGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000434764.1 ENST00000653517.1 |
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| CDS CAA 90 bp | TGGGCCCCGACCTCCAGCTGGTGGGTAGGAATTGTTGGGAAAGGATaGGCGCCCCAGCACCGGGAGACTGGAAGAGTTGAAATCAACGCA | + |
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Preference number: 6 (lower is better) Translates to: WAPTSSWWVGIVGKG*APQHRETGRVEINA Trigger: TGCGTTGATTTCAACTCTTCCAGTCTCCCGGTGCTGGGGCGCCAATCCTTTCCCAACAATTCCTACCCACCAGCTGGAGGTCGGGGCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS TCA 72 bp | GCAGCAGTGTTTCTCCTCCGCCGACAAAGTGGGTGGTaGGAACACAACTCCGGCACGGTCCTTCCATTCCAC | + |
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Preference number: 6 (lower is better) Translates to: AAVFLLRRQSGW*EHNSGTVLPFH Trigger: GTGGAATGGAAGGACCGTGCCGGAGTTGTGTTCTCACCACCCACTTTGTCGGCGGAGGAGAAACACTGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS TCA 72 bp | CTGCTTCCAACTGCGATTTCAGCTTTCTTATGGAAATaGACGCGACGGCCCGTTCGCCCCGAGCCTCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: LLPTAISAFLWK*TRRPVRPEPPS Trigger: GGAGGGAGGCTCGGGGCGAACGGGCCGTCGCGTTCATTTCCATAAGAAAGCTGAAATCGCAGTTGGAAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434764.1 |
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| CDS CAA 72 bp | GGTGGCAGGAGAGCTACTCATTCAGCAGTAGCAGCATaGCGCCGCTGCAGCATCCCGAGGTCACATTCAGAA | + |
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Preference number: 6 (lower is better) Translates to: GGRRATHSAVAA*RRCSIPRSHSE Trigger: TTCTGAATGTGACCTCGGGATGCTGCAGCGGCGCAATGCTGCTACTGCTGAATGAGTAGCTCTCCTGCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS TCA 72 bp | ATCTCACCAGACTCTCCCACCAGGTGTCCTGGGAACTaGGTGATGTGGGTCTCCTGTAAGGTAAGTGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: ISPDSPTRCPGN*VMWVSCKVSGG Trigger: CCCTCCACTTACCTTACAGGAGACCCACATCACTCAGTTCCCAGGACACCTGGTGGGAGAGTCTGGTGAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653517.1 |
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| CDS GCA 72 bp | AGAGCTACTCATTCAGCAGTAGCAGCATTGCGCCGCTaGAGCATCCCGAGGTCACATTCAGAAAGCCCGTTC | + |
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Preference number: 6 (lower is better) Translates to: RATHSAVAALRR*SIPRSHSESPF Trigger: GAACGGGCTTTCTGAATGTGACCTCGGGATGCTGCAGCGGCGCAATGCTGCTACTGCTGAATGAGTAGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS CCA 72 bp | AGTGGTACCCAAGACTACTGGGACCTGGCTGCCCTGTaGGGTAGTAGGAGCCAGGTTAGTTCACAACTGTGT | + |
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Preference number: 6 (lower is better) Translates to: SGTQDYWDLAAL*GSRSQVSSQLC Trigger: ACACAGTTGTGAACTAACCTGGCTCCTACTACCCCACAGGGCAGCCAGGTCCCAGTAGTCTTGGGTACCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS TCA 72 bp | CAGGGAATGAAGCTTCCACCTCCATTTGCATCATCCTaGCACCCCCGCCAGAAAACCAAGTGCTGGCTGAGT | + |
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Preference number: 6 (lower is better) Translates to: QGMKLPPPFASS*HPRQKTKCWLS Trigger: ACTCAGCCAGCACTTGGTTTTCTGGCGGGGGTGTCAGGATGATGCAAATGGAGGTGGAAGCTTCATTCCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000433433.1 ENST00000651283.1 |
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| CDS GCA 72 bp | ATGAGCTTCCTGGGAGACCACACATTAGCTCTGTCCTaGAGGACTGCCTCTCCGCATAAGGCAAGCCCATTA | + |
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Preference number: 6 (lower is better) Translates to: MSFLGDHTLALS*RTASPHKASPL Trigger: TAATGGGCTTGCCTTATGCGGAGAGGCAGTCCTGCAGGACAGAGCTAATGTGTGGTCTCCCAGGAAGCTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000433433.1 ENST00000454183.1 ENST00000651283.1 |
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| CDS CAA 72 bp | AAACTAGTACTAAGGATCTTTAAAGGATCACACACCTaGCAGGCGTGTCCCCAGCTCCCGGGACGCAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: KLVLRIFKGSHT*QACPQLPGRRA Trigger: GGCTCTGCGTCCCGGGAGCTGGGGACACGCCTGCAAGGTGTGTGATCCTTTAAAGATCCTTAGTACTAGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS GCA 72 bp | GGAAGGGCTGCAGGGGCGAGAAATCCTGCTTCCAACTaGGATTTCAGCTTTCTTATGGAAATGAACGCGACG | + |
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Preference number: 6 (lower is better) Translates to: GRAAGARNPASN*DFSFLMEMNAT Trigger: CGTCGCGTTCATTTCCATAAGAAAGCTGAAATCGCAGTTGGAAGCAGGATTTCTCGCCCCTGCAGCCCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000434764.1 ENST00000653517.1 |
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| CDS CCA 72 bp | TGGCTAAGCAGGAGTCCATACTTTACAATGGTGGTATaGTGGGGGCAGTGGTACCCAAGACTACTGGGACCT | + |
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Preference number: 6 (lower is better) Translates to: WLSRSPYFTMVV*WGQWYPRLLGP Trigger: AGGTCCCAGTAGTCTTGGGTACCACTGCCCCCACCATACCACCATTGTAAAGTATGGACTCCTGCTTAGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS GCA 72 bp | TTGTGTGCAGGTAAAGTCATACCTGCACCATCTGTGTaGCAGAGCATCCTTCAGAGATCCTGCCTAGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: LCAGKVIPAPSV*QSILQRSCLEL Trigger: CAGCTCTAGGCAGGATCTCTGAAGGATGCTCTGGCACACAGATGGTGCAGGTATGACTTTACCTGCACACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS CCA 72 bp | GAGCATCCTTCAGAGATCCTGCCTAGAGCTGCACGTTaGCTAAGCAGGAGTCCATACTTTACAATGGTGGTA | + |
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Preference number: 6 (lower is better) Translates to: EHPSEILPRAAR*LSRSPYFTMVV Trigger: TACCACCATTGTAAAGTATGGACTCCTGCTTAGCCAACGTGCAGCTCTAGGCAGGATCTCTGAAGGATGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS CAA 90 bp | GAAATGGGGAAACGTGTAGCCATATATGACAGGGCACATGTAAGCTaGTGTGCAGGTAAAGTCATACCTGCACCATCTGTGTGCCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: EMGKRVAIYDRAHVS*CAGKVIPAPSVCQS Trigger: GCTCTGGCACACAGATGGTGCAGGTATGACTTTACCTGCACACAAGCTTACATGTGCCCTGTCATATATGGCTACACGTTTCCCCATTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS CAA 72 bp | AAACGTGTAGCCATATATGACAGGGCACATGTAAGCTaGTGTGCAGGTAAAGTCATACCTGCACCATCTGTG | + |
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Preference number: 6 (lower is better) Translates to: KRVAIYDRAHVS*CAGKVIPAPSV Trigger: CACAGATGGTGCAGGTATGACTTTACCTGCACACAAGCTTACATGTGCCCTGTCATATATGGCTACACGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS CAA 90 bp | TCCATTCCACATACAGACAGGAAACCGGCCTCTTCGGGACAACATTaGAAACCACATTTTATCAACATCATCAAAGACCAGAGCACACAC | + |
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Preference number: 6 (lower is better) Translates to: SIPHTDRKPASSGQH*KPHFINIIKDQSTH Trigger: GTGTGTGCTCTGGTCTTTGATGATGTTGATAAAATGTGGTTTCAAATGTTGTCCCGAAGAGGCCGGTTTCCTGTCTGTATGTGGAATGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000433433.1 ENST00000434764.1 ENST00000653517.1 |
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| CDS CAA 72 bp | AACCAAGTGCTGGCTGAGTTGGGGCAAAATGGTAACTaGAGGAATCCCAGTGTGAGTGTGTTACATAACATA | + |
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Preference number: 6 (lower is better) Translates to: NQVLAELGQNGN*RNPSVSVLHNI Trigger: TATGTTATGTAACACACTCACACTGGGATTCCTCAAGTTACCATTTTGCCCCAACTCAGCCAGCACTTGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000433433.1 ENST00000651283.1 |
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| CDS CAA 72 bp | CATACAGACAGGAAACCGGCCTCTTCGGGACAACATTaGAAACCACATTTTATCAACATCATCAAAGACCAG | + |
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Preference number: 6 (lower is better) Translates to: HTDRKPASSGQH*KPHFINIIKDQ Trigger: CTGGTCTTTGATGATGTTGATAAAATGTGGTTTCAAATGTTGTCCCGAAGAGGCCGGTTTCCTGTCTGTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000433433.1 ENST00000434764.1 ENST00000653517.1 |
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| CDS TCA 72 bp | CTGTTCTTCTCTTTATGTCCATTTTCAAACAAGTTGTaGGTAGAGGAAGTCTGCCTCCAAATCTCACCAGAC | + |
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Preference number: 6 (lower is better) Translates to: LFFSLCPFSNKL*VEEVCLQISPD Trigger: GTCTGGTGAGATTTGGAGGCAGACTTCCTCTACTCACAACTTGTTTGAAAATGGACATAAAGAGAAGAACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653517.1 |
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| CDS CAA 72 bp | TTTCAAAATCGCTCAGGCAAGTCTACTGATTCTACTTaGTACGCCTTAAAGACTTATGCCAAGCACAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: FQNRSGKSTDST*YALKTYAKHSF Trigger: AAAGCTGTGCTTGGCATAAGTCTTTAAGGCGTACAAAGTAGAATCAGTAGACTTGCCTGAGCGATTTTGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS CAA 90 bp | TCTTTCAAATTTCAAAATCGCTCAGGCAAGTCTACTGATTCTACTTaGTACGCCTTAAAGACTTATGCCAAGCACAGCTTTAAAAACGTT | + |
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Preference number: 6 (lower is better) Translates to: SFKFQNRSGKSTDST*YALKTYAKHSFKNV Trigger: AACGTTTTTAAAGCTGTGCTTGGCATAAGTCTTTAAGGCGTACAAAGTAGAATCAGTAGACTTGCCTGAGCGATTTTGAAATTTGAAAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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| CDS TCA 72 bp | ATCTTTCAAATTTCAAAATCGCTCAGGCAAGTCTACTaGTTCTACTTTGTACGCCTTAAAGACTTATGCCAA | + |
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Preference number: 6 (lower is better) Translates to: IFQISKSLRQVY*FYFVRLKDLCQ Trigger: TTGGCATAAGTCTTTAAGGCGTACAAAGTAGAATCAGTAGACTTGCCTGAGCGATTTTGAAATTTGAAAGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433433.1 |
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