Pregenerated sensors for LINC01153 (Homo sapiens)
Ensembl gene IDs: ENSG00000227143Ensembl transcript IDs: ENST00000429809.1
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CTGGATGAAACCCTGTGCTTTGGGAGGTCTGCCCTCCCTACCTCTTaGAGAGGGGGTCCCAAGCCTAGAGTCAGGTCACAGGCCAAGGCT | + |
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Preference number: 5 (lower is better) Translates to: LDETLCFGRSALPTS*RGGPKPRVRSQAKA Trigger: AGCCTTGGCCTGTGACCTGACTCTAGGCTTGGGACCCCCTCTCCAAGAGGTAGGGAGGGCAGACCTCCCAAAGCACAGGGTTTCATCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS CCA 90 bp | GGAGGGGGAGTGTGGTCCTCAAGTACCTGCAGCTGCATCCTCTTCTaGAGACAGCTCCACAGGCAACGTCTCTGCATGCAAATGTCGGCT | + |
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Preference number: 5 (lower is better) Translates to: GGGVWSSSTCSCILF*RQLHRQRLCMQMSA Trigger: AGCCGACATTTGCATGCAGAGACGTTGCCTGTGGAGCTGTCTCCAGAAGAGGATGCAGCTGCAGGTACTTGAGGACCACACTCCCCCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS GCA 90 bp | ACATTAGGCTTGGGAGGGGGAGTGTGGTCCTCAAGTACCTGCAGCTaGATCCTCTTCTGGAGACAGCTCCACAGGCAACGTCTCTGCATG | + |
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Preference number: 5 (lower is better) Translates to: TLGLGGGVWSSSTCS*ILFWRQLHRQRLCM Trigger: CATGCAGAGACGTTGCCTGTGGAGCTGTCTCCAGAAGAGGATGCAGCTGCAGGTACTTGAGGACCACACTCCCCCTCCCAAGCCTAATGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS CCA 90 bp | GTGGTATGGCCAGGTAGGGAGGGCTTGTCACTGAGAGTCACCAAGTaGGGTGGAGCTTCTGCTGTGTCCCTTACTGGTAGTGAGCTTAGG | + |
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Preference number: 5 (lower is better) Translates to: VVWPGREGLSLRVTK*GGASAVSLTGSELR Trigger: CCTAAGCTCACTACCAGTAAGGGACACAGCAGAAGCTCCACCCCACTTGGTGACTCTCAGTGACAAGCCCTCCCTACCTGGCCATACCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS GCA 90 bp | TGCAGCTGCATCCTCTTCTGGAGACAGCTCCACAGGCAACGTCTCTaGATGCAAATGTCGGCTGGCATTCTGGTGTGGCTTCTCATGCAT | + |
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Preference number: 5 (lower is better) Translates to: CSCILFWRQLHRQRL*MQMSAGILVWLLMH Trigger: ATGCATGAGAAGCCACACCAGAATGCCAGCCGACATTTGCATGCAGAGACGTTGCCTGTGGAGCTGTCTCCAGAAGAGGATGCAGCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS GCA 90 bp | AGGTCACGTGTGGAATTAGCAGAGCATCAGAGAAACGCTGGCCATTaGTGTTATCAGGGGTCATTCGGAGGGTGCCGAGGACTGCAAAGG | + |
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Preference number: 5 (lower is better) Translates to: RSRVELAEHQRNAGH*CYQGSFGGCRGLQR Trigger: CCTTTGCAGTCCTCGGCACCCTCCGAATGACCCCTGATAACAGCAATGGCCAGCGTTTCTCTGATGCTCTGCTAATTCCACACGTGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS CCA 90 bp | CTGGAGACAGCTCCACAGGCAACGTCTCTGCATGCAAATGTCGGCTaGCATTCTGGTGTGGCTTCTCATGCATGTAGGTATCAGGATCCC | + |
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Preference number: 5 (lower is better) Translates to: LETAPQATSLHANVG*HSGVASHACRYQDP Trigger: GGGATCCTGATACCTACATGCATGAGAAGCCACACCAGAATGCCAGCCGACATTTGCATGCAGAGACGTTGCCTGTGGAGCTGTCTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS CCA 90 bp | TCAGATGAGGTCACGTGTGGAATTAGCAGAGCATCAGAGAAACGCTaGCCATTGCTGTTATCAGGGGTCATTCGGAGGGTGCCGAGGACT | + |
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Preference number: 5 (lower is better) Translates to: SDEVTCGISRASEKR*PLLLSGVIRRVPRT Trigger: AGTCCTCGGCACCCTCCGAATGACCCCTGATAACAGCAATGGCCAGCGTTTCTCTGATGCTCTGCTAATTCCACACGTGACCTCATCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS CCA 90 bp | CACAGGCAACGTCTCTGCATGCAAATGTCGGCTGGCATTCTGGTGTaGCTTCTCATGCATGTAGGTATCAGGATCCCAGCCATCTTAGGA | + |
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Preference number: 5 (lower is better) Translates to: HRQRLCMQMSAGILV*LLMHVGIRIPAILG Trigger: TCCTAAGATGGCTGGGATCCTGATACCTACATGCATGAGAAGCCACACCAGAATGCCAGCCGACATTTGCATGCAGAGACGTTGCCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS CCA 90 bp | TGTTTTCCATACTGGCAACAGAGCTTTACACCACATGAGGTGGTATaGCCAGGTAGGGAGGGCTTGTCACTGAGAGTCACCAAGTGGGGT | + |
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Preference number: 5 (lower is better) Translates to: CFPYWQQSFTPHEVV*PGREGLSLRVTKWG Trigger: ACCCCACTTGGTGACTCTCAGTGACAAGCCCTCCCTACCTGGCCATACCACCTCATGTGGTGTAAAGCTCTGTTGCCAGTATGGAAAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS GCA 90 bp | TTGACAGTGTTAATGCAATGTCAATTTGGGCTAGAACCTTGGGCATaGTGCTTCTTGTGCAGTTTTGAGAATGAGAAGAGGCACAGGGGT | + |
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Preference number: 5 (lower is better) Translates to: LTVLMQCQFGLEPWA*CFLCSFENEKRHRG Trigger: ACCCCTGTGCCTCTTCTCATTCTCAAAACTGCACAAGAAGCAGCATGCCCAAGGTTCTAGCCCAAATTGACATTGCATTAACACTGTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS CCA 90 bp | AAGAATACGTCCTCAGCTTCAGAGGTTCCTACCTGGGAGACAGAGTaGAGAAGAGAGGGTCCTTTTGCAGACCTTAATGAATTAATGGAT | + |
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Preference number: 5 (lower is better) Translates to: KNTSSASEVPTWETE*RREGPFADLNELMD Trigger: ATCCATTAATTCATTAAGGTCTGCAAAAGGACCCTCTCTTCTCCACTCTGTCTCCCAGGTAGGAACCTCTGAAGCTGAGGACGTATTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS CCA 90 bp | ATGCAAGTGGATATTTGGTTTTACTCGTGTGAGTGTTTTCCATACTaGCAACAGAGCTTTACACCACATGAGGTGGTATGGCCAGGTAGG | + |
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Preference number: 5 (lower is better) Translates to: MQVDIWFYSCECFPY*QQSFTPHEVVWPGR Trigger: CCTACCTGGCCATACCACCTCATGTGGTGTAAAGCTCTGTTGCCAGTATGGAAAACACTCACACGAGTAAAACCAAATATCCACTTGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS GCA 90 bp | GAAAGCCTGTGTGTAATCTCTAGGATTTTCCAAAATGAATCCCAGTaGCCTTTGGATAAGCAGAGAACCAGGGAGTCAGCAGAATACATT | + |
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Preference number: 5 (lower is better) Translates to: ESLCVISRIFQNESQ*PLDKQRTRESAEYI Trigger: AATGTATTCTGCTGACTCCCTGGTTCTCTGCTTATCCAAAGGGCACTGGGATTCATTTTGGAAAATCCTAGAGATTACACACAGGCTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS CCA 90 bp | GATGGGCCTAATTATGCCTTTGTCTCTAAACTGCTGAATGAAGAATaGACAACCTATGTGTGTCTAGGAATATTTCCTGGCCTCTCGACT | + |
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Preference number: 5 (lower is better) Translates to: DGPNYAFVSKLLNEE*TTYVCLGIFPGLST Trigger: AGTCGAGAGGCCAGGAAATATTCCTAGACACACATAGGTTGTCCATTCTTCATTCAGCAGTTTAGAGACAAAGGCATAATTAGGCCCATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS CCA 90 bp | AATGTTTTGACAGTGTTAATGCAATGTCAATTTGGGCTAGAACCTTaGGCATGCTGCTTCTTGTGCAGTTTTGAGAATGAGAAGAGGCAC | + |
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Preference number: 5 (lower is better) Translates to: NVLTVLMQCQFGLEP*ACCFLCSFENEKRH Trigger: GTGCCTCTTCTCATTCTCAAAACTGCACAAGAAGCAGCATGCCCAAGGTTCTAGCCCAAATTGACATTGCATTAACACTGTCAAAACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS TCA 90 bp | TTTCAGCAAAGAATAATCTCTTTTTGCAACTCAATTATGAGTAATTaGGAAGTGGTTTTTGCATTGCCAATGCTCAGTGCGCTGCCATGT | + |
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Preference number: 5 (lower is better) Translates to: FQQRIISFCNSIMSN*EVVFALPMLSALPC Trigger: ACATGGCAGCGCACTGAGCATTGGCAATGCAAAAACCACTTCTCAATTACTCATAATTGAGTTGCAAAAAGAGATTATTCTTTGCTGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS CCA 72 bp | ACCCTGTGCTTTGGGAGGTCTGCCCTCCCTACCTCTTaGAGAGGGGGTCCCAAGCCTAGAGTCAGGTCACAG | + |
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Preference number: 6 (lower is better) Translates to: TLCFGRSALPTS*RGGPKPRVRSQ Trigger: CTGTGACCTGACTCTAGGCTTGGGACCCCCTCTCCAAGAGGTAGGGAGGGCAGACCTCCCAAAGCACAGGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS GCA 72 bp | TTGGGAGGGGGAGTGTGGTCCTCAAGTACCTGCAGCTaGATCCTCTTCTGGAGACAGCTCCACAGGCAACGT | + |
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Preference number: 6 (lower is better) Translates to: LGGGVWSSSTCS*ILFWRQLHRQR Trigger: ACGTTGCCTGTGGAGCTGTCTCCAGAAGAGGATGCAGCTGCAGGTACTTGAGGACCACACTCCCCCTCCCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS GCA 72 bp | TTAGGCTTGGGAGGGGGAGTGTGGTCCTCAAGTACCTaGAGCTGCATCCTCTTCTGGAGACAGCTCCACAGG | + |
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Preference number: 6 (lower is better) Translates to: LGLGGGVWSSST*SCILFWRQLHR Trigger: CCTGTGGAGCTGTCTCCAGAAGAGGATGCAGCTGCAGGTACTTGAGGACCACACTCCCCCTCCCAAGCCTAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS CAA 90 bp | CAGAGCTTTACACCACATGAGGTGGTATGGCCAGGTAGGGAGGGCTaGTCACTGAGAGTCACCAAGTGGGGTGGAGCTTCTGCTGTGTCC | + |
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Preference number: 6 (lower is better) Translates to: QSFTPHEVVWPGREG*SLRVTKWGGASAVS Trigger: GGACACAGCAGAAGCTCCACCCCACTTGGTGACTCTCAGTGACAAGCCCTCCCTACCTGGCCATACCACCTCATGTGGTGTAAAGCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS CAA 72 bp | ACACCACATGAGGTGGTATGGCCAGGTAGGGAGGGCTaGTCACTGAGAGTCACCAAGTGGGGTGGAGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: TPHEVVWPGREG*SLRVTKWGGAS Trigger: AGAAGCTCCACCCCACTTGGTGACTCTCAGTGACAAGCCCTCCCTACCTGGCCATACCACCTCATGTGGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS CAA 90 bp | GGCAGCCTTAGAAATTATAAAGAGCCCTGGATGAAACCCTGTGCTTaGGGAGGTCTGCCCTCCCTACCTCTTGGAGAGGGGGTCCCAAGC | + |
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Preference number: 6 (lower is better) Translates to: GSLRNYKEPWMKPCA*GGLPSLPLGEGVPS Trigger: GCTTGGGACCCCCTCTCCAAGAGGTAGGGAGGGCAGACCTCCCAAAGCACAGGGTTTCATCCAGGGCTCTTTATAATTTCTAAGGCTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS CCA 72 bp | GTGTGGTCCTCAAGTACCTGCAGCTGCATCCTCTTCTaGAGACAGCTCCACAGGCAACGTCTCTGCATGCAA | + |
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Preference number: 6 (lower is better) Translates to: VWSSSTCSCILF*RQLHRQRLCMQ Trigger: TTGCATGCAGAGACGTTGCCTGTGGAGCTGTCTCCAGAAGAGGATGCAGCTGCAGGTACTTGAGGACCACAC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS CAA 90 bp | GAGGTCACGTGTGGAATTAGCAGAGCATCAGAGAAACGCTGGCCATaGCTGTTATCAGGGGTCATTCGGAGGGTGCCGAGGACTGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: EVTCGISRASEKRWP*LLSGVIRRVPRTAK Trigger: CTTTGCAGTCCTCGGCACCCTCCGAATGACCCCTGATAACAGCAATGGCCAGCGTTTCTCTGATGCTCTGCTAATTCCACACGTGACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS GCA 72 bp | TCTTCTGGAGACAGCTCCACAGGCAACGTCTCTGCATaGAAATGTCGGCTGGCATTCTGGTGTGGCTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: SSGDSSTGNVSA*KCRLAFWCGFS Trigger: TGAGAAGCCACACCAGAATGCCAGCCGACATTTGCATGCAGAGACGTTGCCTGTGGAGCTGTCTCCAGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS GCA 72 bp | ATCCTCTTCTGGAGACAGCTCCACAGGCAACGTCTCTaGATGCAAATGTCGGCTGGCATTCTGGTGTGGCTT | + |
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Preference number: 6 (lower is better) Translates to: ILFWRQLHRQRL*MQMSAGILVWL Trigger: AAGCCACACCAGAATGCCAGCCGACATTTGCATGCAGAGACGTTGCCTGTGGAGCTGTCTCCAGAAGAGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS GCA 72 bp | GTGGAATTAGCAGAGCATCAGAGAAACGCTGGCCATTaGTGTTATCAGGGGTCATTCGGAGGGTGCCGAGGA | + |
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Preference number: 6 (lower is better) Translates to: VELAEHQRNAGH*CYQGSFGGCRG Trigger: TCCTCGGCACCCTCCGAATGACCCCTGATAACAGCAATGGCCAGCGTTTCTCTGATGCTCTGCTAATTCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS CCA 72 bp | CGTCTCTGCATGCAAATGTCGGCTGGCATTCTGGTGTaGCTTCTCATGCATGTAGGTATCAGGATCCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: RLCMQMSAGILV*LLMHVGIRIPA Trigger: GGCTGGGATCCTGATACCTACATGCATGAGAAGCCACACCAGAATGCCAGCCGACATTTGCATGCAGAGACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS CAA 72 bp | TGTGGAATTAGCAGAGCATCAGAGAAACGCTGGCCATaGCTGTTATCAGGGGTCATTCGGAGGGTGCCGAGG | + |
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Preference number: 6 (lower is better) Translates to: CGISRASEKRWP*LLSGVIRRVPR Trigger: CCTCGGCACCCTCCGAATGACCCCTGATAACAGCAATGGCCAGCGTTTCTCTGATGCTCTGCTAATTCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS GCA 72 bp | GAGAAGTGGTTTTTGCATTGCCAATGCTCAGTGCGCTaGCATGTAGGGAACATTAGGCTTGGGAGGGGGAGT | + |
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Preference number: 6 (lower is better) Translates to: EKWFLHCQCSVR*HVGNIRLGRGS Trigger: ACTCCCCCTCCCAAGCCTAATGTTCCCTACATGGCAGCGCACTGAGCATTGGCAATGCAAAAACCACTTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS CCA 72 bp | GCTCCACAGGCAACGTCTCTGCATGCAAATGTCGGCTaGCATTCTGGTGTGGCTTCTCATGCATGTAGGTAT | + |
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Preference number: 6 (lower is better) Translates to: APQATSLHANVG*HSGVASHACRY Trigger: ATACCTACATGCATGAGAAGCCACACCAGAATGCCAGCCGACATTTGCATGCAGAGACGTTGCCTGTGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS CCA 72 bp | GTCACGTGTGGAATTAGCAGAGCATCAGAGAAACGCTaGCCATTGCTGTTATCAGGGGTCATTCGGAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: VTCGISRASEKR*PLLLSGVIRRV Trigger: CACCCTCCGAATGACCCCTGATAACAGCAATGGCCAGCGTTTCTCTGATGCTCTGCTAATTCCACACGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS CAA 72 bp | AGAAATTATAAAGAGCCCTGGATGAAACCCTGTGCTTaGGGAGGTCTGCCCTCCCTACCTCTTGGAGAGGGG | + |
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Preference number: 6 (lower is better) Translates to: RNYKEPWMKPCA*GGLPSLPLGEG Trigger: CCCCTCTCCAAGAGGTAGGGAGGGCAGACCTCCCAAAGCACAGGGTTTCATCCAGGGCTCTTTATAATTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS CAA 72 bp | CGCAGGTGCGCGGCCACCAGGAAACCTGTCAATTACTaGCCCCTTCCACCCTTTCCTTTACATTGGACTTTA | + |
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Preference number: 6 (lower is better) Translates to: RRCAATRKPVNY*PLPPFPLHWTL Trigger: TAAAGTCCAATGTAAAGGAAAGGGTGGAAGGGGCAAGTAATTGACAGGTTTCCTGGTGGCCGCGCACCTGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS CCA 72 bp | AGCAAGAATACGTCCTCAGCTTCAGAGGTTCCTACCTaGGAGACAGAGTGGAGAAGAGAGGGTCCTTTTGCA | + |
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Preference number: 6 (lower is better) Translates to: SKNTSSASEVPT*ETEWRREGPFA Trigger: TGCAAAAGGACCCTCTCTTCTCCACTCTGTCTCCCAGGTAGGAACCTCTGAAGCTGAGGACGTATTCTTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS CCA 72 bp | TCCTCAGCTTCAGAGGTTCCTACCTGGGAGACAGAGTaGAGAAGAGAGGGTCCTTTTGCAGACCTTAATGAA | + |
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Preference number: 6 (lower is better) Translates to: SSASEVPTWETE*RREGPFADLNE Trigger: TTCATTAAGGTCTGCAAAAGGACCCTCTCTTCTCCACTCTGTCTCCCAGGTAGGAACCTCTGAAGCTGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS CCA 72 bp | GTTTTAGAGGGCAGCCTTAGAAATTATAAAGAGCCCTaGATGAAACCCTGTGCTTTGGGAGGTCTGCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: VLEGSLRNYKEP*MKPCALGGLPS Trigger: GGAGGGCAGACCTCCCAAAGCACAGGGTTTCATCCAGGGCTCTTTATAATTTCTAAGGCTGCCCTCTAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS CCA 72 bp | TTTCCCCGAGGTAAGCATCAAGTTTCTCCTCCCCTTTaGAATCTTGATGGAACCAGGAAGTCAGAGTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: FPRGKHQVSPPL*NLDGTRKSESA Trigger: TGCTGACTCTGACTTCCTGGTTCCATCAAGATTCCAAAGGGGAGGAGAAACTTGATGCTTACCTCGGGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS TCA 72 bp | TGGCTGCAAACATCACAAACAGAGAAGCAACCTGACTaGTGGAAGAACACAGCTCTACTCATGAGGTGGTCT | + |
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Preference number: 6 (lower is better) Translates to: WLQTSQTEKQPD*WKNTALLMRWS Trigger: AGACCACCTCATGAGTAGAGCTGTGTTCTTCCATCAGTCAGGTTGCTTCTCTGTTTGTGATGTTTGCAGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS TCA 72 bp | ATGGGAGACAATAATCCTTACCTCACAGGGTCATTGTaGGGCTCAGATGAGGTCACGTGTGGAATTAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: MGDNNPYLTGSL*GSDEVTCGISR Trigger: TCTGCTAATTCCACACGTGACCTCATCTGAGCCTCACAATGACCCTGTGAGGTAAGGATTATTGTCTCCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS CAA 72 bp | GAGGTAAGCATCAAGTTTCTCCTCCCCTTTGGAATCTaGATGGAACCAGGAAGTCAGAGTCAGCAACAATGG | + |
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Preference number: 6 (lower is better) Translates to: EVSIKFLLPFGI*MEPGSQSQQQW Trigger: CCATTGTTGCTGACTCTGACTTCCTGGTTCCATCAAGATTCCAAAGGGGAGGAGAAACTTGATGCTTACCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS TCA 72 bp | TCAATGGCTGCAAACATCACAAACAGAGAAGCAACCTaGCTGATGGAAGAACACAGCTCTACTCATGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: SMAANITNREAT*LMEEHSSTHEV Trigger: CACCTCATGAGTAGAGCTGTGTTCTTCCATCAGTCAGGTTGCTTCTCTGTTTGTGATGTTTGCAGCCATTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS GCA 72 bp | TGTGTAATCTCTAGGATTTTCCAAAATGAATCCCAGTaGCCTTTGGATAAGCAGAGAACCAGGGAGTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: CVISRIFQNESQ*PLDKQRTRESA Trigger: TGCTGACTCCCTGGTTCTCTGCTTATCCAAAGGGCACTGGGATTCATTTTGGAAAATCCTAGAGATTACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS CCA 72 bp | AGAATGGACAACCTATGTGTGTCTAGGAATATTTCCTaGCCTCTCGACTCTGGATGTCATTTTGGACAATGC | + |
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Preference number: 6 (lower is better) Translates to: RMDNLCVSRNIS*PLDSGCHFGQC Trigger: GCATTGTCCAAAATGACATCCAGAGTCGAGAGGCCAGGAAATATTCCTAGACACACATAGGTTGTCCATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS GCA 72 bp | TTAATGCAATGTCAATTTGGGCTAGAACCTTGGGCATaGTGCTTCTTGTGCAGTTTTGAGAATGAGAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: LMQCQFGLEPWA*CFLCSFENEKR Trigger: CCTCTTCTCATTCTCAAAACTGCACAAGAAGCAGCATGCCCAAGGTTCTAGCCCAAATTGACATTGCATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS CCA 72 bp | ACAGTGTTAATGCAATGTCAATTTGGGCTAGAACCTTaGGCATGCTGCTTCTTGTGCAGTTTTGAGAATGAG | + |
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Preference number: 6 (lower is better) Translates to: TVLMQCQFGLEP*ACCFLCSFENE Trigger: CTCATTCTCAAAACTGCACAAGAAGCAGCATGCCCAAGGTTCTAGCCCAAATTGACATTGCATTAACACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS CCA 72 bp | GATATTTGGTTTTACTCGTGTGAGTGTTTTCCATACTaGCAACAGAGCTTTACACCACATGAGGTGGTATGG | + |
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Preference number: 6 (lower is better) Translates to: DIWFYSCECFPY*QQSFTPHEVVW Trigger: CCATACCACCTCATGTGGTGTAAAGCTCTGTTGCCAGTATGGAAAACACTCACACGAGTAAAACCAAATATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS CAA 72 bp | GGAATATTTCCTGGCCTCTCGACTCTGGATGTCATTTaGGACAATGCAAGTGGATATTTGGTTTTACTCGTG | + |
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Preference number: 6 (lower is better) Translates to: GIFPGLSTLDVI*DNASGYLVLLV Trigger: CACGAGTAAAACCAAATATCCACTTGCATTGTCCAAAATGACATCCAGAGTCGAGAGGCCAGGAAATATTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS TCA 72 bp | TTGGACAATGCAAGTGGATATTTGGTTTTACTCGTGTaGGTGTTTTCCATACTGGCAACAGAGCTTTACACC | + |
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Preference number: 6 (lower is better) Translates to: LDNASGYLVLLV*VFSILATELYT Trigger: GGTGTAAAGCTCTGTTGCCAGTATGGAAAACACTCACACGAGTAAAACCAAATATCCACTTGCATTGTCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS CCA 72 bp | ACCATGGATACATTCCAAAGAAAGAGTGAACATGCCTaGGTCGTGTTTGTTTTTACAAAGAGAGCCCTGATT | + |
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Preference number: 6 (lower is better) Translates to: TMDTFQRKSEHA*VVFVFTKRALI Trigger: AATCAGGGCTCTCTTTGTAAAAACAAACACGACCCAGGCATGTTCACTCTTTCTTTGGAATGTATCCATGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS CCA 72 bp | GAATATTTCCTGGCCTCTCGACTCTGGATGTCATTTTaGACAATGCAAGTGGATATTTGGTTTTACTCGTGT | + |
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Preference number: 6 (lower is better) Translates to: EYFLASRLWMSF*TMQVDIWFYSC Trigger: ACACGAGTAAAACCAAATATCCACTTGCATTGTCCAAAATGACATCCAGAGTCGAGAGGCCAGGAAATATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS CCA 72 bp | TATCCTGTGTTGCTACAGGCAATTATTTCTTTTCACTaGCTTGCTCATGTAGTATCAACTGGACTTTCTAGA | + |
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Preference number: 6 (lower is better) Translates to: YPVLLQAIISFH*LAHVVSTGLSR Trigger: TCTAGAAAGTCCAGTTGATACTACATGAGCAAGCCAGTGAAAAGAAATAATTGCCTGTAGCAACACAGGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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| CDS TCA 72 bp | AGAATAATCTCTTTTTGCAACTCAATTATGAGTAATTaGGAAGTGGTTTTTGCATTGCCAATGCTCAGTGCG | + |
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Preference number: 6 (lower is better) Translates to: RIISFCNSIMSN*EVVFALPMLSA Trigger: CGCACTGAGCATTGGCAATGCAAAAACCACTTCTCAATTACTCATAATTGAGTTGCAAAAAGAGATTATTCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000429809.1 |
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