Pregenerated sensors for LINC01144 (Homo sapiens)
Ensembl gene IDs: ENSG00000281912Ensembl transcript IDs: ENST00000626198.1
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCGCGGGGCAGGGTGGTGCTCCTGCTGCAGGTTTCAGGCCTCTTCTaGCTTCTACAGCCGCCAGGTCAGCAGAGGCGGAGGCCCGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PRGRVVLLLQVSGLF*LLQPPGQQRRRPGL Trigger: CAGCCCGGGCCTCCGCCTCTGCTGACCTGGCGGCTGTAGAAGGCAGAAGAGGCCTGAAACCTGCAGCAGGAGCACCACCCTGCCCCGCGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626198.1 |
||
| CDS CCA 90 bp | GATGGGATGACGCCACTGGAGGGCGCGCGGGGCCGCGGGGCAGGGTaGTGCTCCTGCTGCAGGTTTCAGGCCTCTTCTGCCTTCTACAGC | + |
|
Preference number: 5 (lower is better) Translates to: DGMTPLEGARGRGAG*CSCCRFQASSAFYS Trigger: GCTGTAGAAGGCAGAAGAGGCCTGAAACCTGCAGCAGGAGCACCACCCTGCCCCGCGGCCCCGCGCGCCCTCCAGTGGCGTCATCCCATC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000626198.1 |
||
| CDS GCA 90 bp | AAGTCAGGACCTCGCAGAACTTTCGCAAGATGGGTCCTCGGAGTCTaGCCGCGATTGCGCTCCCAAGGGGTGCCGCTGCCGAGGGTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: KSGPRRTFARWVLGV*PRLRSQGVPLPRVG Trigger: GCCTACCCTCGGCAGCGGCACCCCTTGGGAGCGCAATCGCGGGCAGACTCCGAGGACCCATCTTGCGAAAGTTCTGCGAGGTCCTGACTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626198.1 |
||
| CDS CCA 90 bp | ACCCCTGTTCCCTTAAAGTCAGGACCTCGCAGAACTTTCGCAAGATaGGTCCTCGGAGTCTGCCCGCGATTGCGCTCCCAAGGGGTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: TPVPLKSGPRRTFAR*VLGVCPRLRSQGVP Trigger: CGGCACCCCTTGGGAGCGCAATCGCGGGCAGACTCCGAGGACCCATCTTGCGAAAGTTCTGCGAGGTCCTGACTTTAAGGGAACAGGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000626198.1 |
||
| CDS CCA 90 bp | CTTGACTTTGACGCAAGGCACAGACTGGGCTCTGAAGGGGCAGGCTaGGGGGTAGACGTCGTCATGGATGTTGGATCTCCCTTCCGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LDFDARHRLGSEGAG*GVDVVMDVGSPFRP Trigger: TGGCCGGAAGGGAGATCCAACATCCATGACGACGTCTACCCCCCAGCCTGCCCCTTCAGAGCCCAGTCTGTGCCTTGCGTCAAAGTCAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000626198.1 |
||
| CDS CCA 90 bp | CATAGTCAGGGTCCCAAGTGGGCAATCCTGGAGCCTCCAGGTCTTTaGTCCAGCGGCGGGGTTTTCCACTCAAGGGCCACAGGTACAGAC | + |
|
Preference number: 5 (lower is better) Translates to: HSQGPKWAILEPPGL*SSGGVFHSRATGTD Trigger: GTCTGTACCTGTGGCCCTTGAGTGGAAAACCCCGCCGCTGGACCAAAGACCTGGAGGCTCCAGGATTGCCCACTTGGGACCCTGACTATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000626198.1 |
||
| CDS CCA 90 bp | GGGGCAGAATGGGCTATCTTGACCCTTCATAGTCAGGGTCCCAAGTaGGCAATCCTGGAGCCTCCAGGTCTTTGGTCCAGCGGCGGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: GAEWAILTLHSQGPK*AILEPPGLWSSGGV Trigger: AACCCCGCCGCTGGACCAAAGACCTGGAGGCTCCAGGATTGCCCACTTGGGACCCTGACTATGAAGGGTCAAGATAGCCCATTCTGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000626198.1 |
||
| CDS TCA 90 bp | CCCAGCGAGTCGGAAGCGTCCCCATTACTAGTTCCTAGAATATGCTaGGATGTCTCAGGTTGCGGTGTGCAGCTGGGAGTTGCAGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PSESEASPLLVPRIC*DVSGCGVQLGVAAW Trigger: CCAGGCTGCAACTCCCAGCTGCACACCGCAACCTGAGACATCTCAGCATATTCTAGGAACTAGTAATGGGGACGCTTCCGACTCGCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626198.1 |
||
| CDS CCA 90 bp | TGGAGTAGGGGCCTTGGTAATAGGGCTCTGAGTGCTGGGGCAGAATaGGCTATCTTGACCCTTCATAGTCAGGGTCCCAAGTGGGCAATC | + |
|
Preference number: 5 (lower is better) Translates to: WSRGLGNRALSAGAE*AILTLHSQGPKWAI Trigger: GATTGCCCACTTGGGACCCTGACTATGAAGGGTCAAGATAGCCCATTCTGCCCCAGCACTCAGAGCCCTATTACCAAGGCCCCTACTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000626198.1 |
||
| CDS GCA 90 bp | AAGATGCGTGCCCGTGACACAGCCTCAGGGAGTCCTGGCGACATGTaGCCAAGGTGGTCAGGGCACAGTTTGTTTTCATACATTTTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: KMRARDTASGSPGDM*PRWSGHSLFSYILR Trigger: CCTTAAAATGTATGAAAACAAACTGTGCCCTGACCACCTTGGGCACATGTCGCCAGGACTCCCTGAGGCTGTGTCACGGGCACGCATCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000626198.1 |
||
| CDS CCA 90 bp | GCCCGTGACACAGCCTCAGGGAGTCCTGGCGACATGTGCCCAAGGTaGTCAGGGCACAGTTTGTTTTCATACATTTTAAGGAGACATGAG | + |
|
Preference number: 5 (lower is better) Translates to: ARDTASGSPGDMCPR*SGHSLFSYILRRHE Trigger: CTCATGTCTCCTTAAAATGTATGAAAACAAACTGTGCCCTGACCACCTTGGGCACATGTCGCCAGGACTCCCTGAGGCTGTGTCACGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000626198.1 |
||
| CDS GCA 90 bp | CAAGCTCAAAGGAAAATTCAGGTTGGGAACTGCTCAGGCCACACCTaGCTCCCATTCTATTCAGTCACCCCTCTGCTCATGATGAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: QAQRKIQVGNCSGHT*LPFYSVTPLLMMNR Trigger: CCTGTTCATCATGAGCAGAGGGGTGACTGAATAGAATGGGAGGCAGGTGTGGCCTGAGCAGTTCCCAACCTGAATTTTCCTTTGAGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000626198.1 |
||
| CDS TCA 90 bp | AGGTCGCAGGTAGCTGAGAGACAAATGGTTGCATTATTTTGTTTCTaGCAAGCCTCTCCAAAGGAGGCAATCAGGTATGTGTCTATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RSQVAERQMVALFCF*QASPKEAIRYVSIS Trigger: TGAGATAGACACATACCTGATTGCCTCCTTTGGAGAGGCTTGTCAGAAACAAAATAATGCAACCATTTGTCTCTCAGCTACCTGCGACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626198.1 |
||
| CDS CCA 72 bp | GCCGAGGGTAGGCGCGCCAGTCGAGATCAAAGCGGATaGGATGACGCCACTGGAGGGCGCGCGGGGCCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: AEGRRASRDQSG*DDATGGRAGPR Trigger: CCGCGGCCCCGCGCGCCCTCCAGTGGCGTCATCCCATCCGCTTTGATCTCGACTGGCGCGCCTACCCTCGGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626198.1 |
||
| CDS CAA 90 bp | CCTCGCAGAACTTTCGCAAGATGGGTCCTCGGAGTCTGCCCGCGATaGCGCTCCCAAGGGGTGCCGCTGCCGAGGGTAGGCGCGCCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: PRRTFARWVLGVCPR*RSQGVPLPRVGAPV Trigger: GACTGGCGCGCCTACCCTCGGCAGCGGCACCCCTTGGGAGCGCAATCGCGGGCAGACTCCGAGGACCCATCTTGCGAAAGTTCTGCGAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626198.1 |
||
| CDS GCA 72 bp | CCTCGCAGAACTTTCGCAAGATGGGTCCTCGGAGTCTaGCCGCGATTGCGCTCCCAAGGGGTGCCGCTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: PRRTFARWVLGV*PRLRSQGVPLP Trigger: CGGCAGCGGCACCCCTTGGGAGCGCAATCGCGGGCAGACTCCGAGGACCCATCTTGCGAAAGTTCTGCGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626198.1 |
||
| CDS CAA 72 bp | ACTTTCGCAAGATGGGTCCTCGGAGTCTGCCCGCGATaGCGCTCCCAAGGGGTGCCGCTGCCGAGGGTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: TFARWVLGVCPR*RSQGVPLPRVG Trigger: GCCTACCCTCGGCAGCGGCACCCCTTGGGAGCGCAATCGCGGGCAGACTCCGAGGACCCATCTTGCGAAAGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626198.1 |
||
| CDS TCA 72 bp | AGTTGCAGCCTGGCAGGAGGCCCAGGTTTTAGCCTGTaGACCGGGGCCCTGCTATGTAGGCCAGGGTGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SCSLAGGPGFSL*TGALLCRPGWL Trigger: GAGCCACCCTGGCCTACATAGCAGGGCCCCGGTTCACAGGCTAAAACCTGGGCCTCCTGCCAGGCTGCAACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000626198.1 |
||
| CDS GCA 72 bp | CAGGAGGCCCAGGTTTTAGCCTGTGAACCGGGGCCCTaGTATGTAGGCCAGGGTGGCTCTGACCTGGCACTC | + |
|
Preference number: 6 (lower is better) Translates to: QEAQVLACEPGP*YVGQGGSDLAL Trigger: GAGTGCCAGGTCAGAGCCACCCTGGCCTACATAGCAGGGCCCCGGTTCACAGGCTAAAACCTGGGCCTCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000626198.1 |
||
| CDS CCA 72 bp | GTCTCAGGTTGCGGTGTGCAGCTGGGAGTTGCAGCCTaGCAGGAGGCCCAGGTTTTAGCCTGTGAACCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: VSGCGVQLGVAA*QEAQVLACEPG Trigger: CCCCGGTTCACAGGCTAAAACCTGGGCCTCCTGCCAGGCTGCAACTCCCAGCTGCACACCGCAACCTGAGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626198.1 |
||
| CDS CCA 72 bp | GACGCAAGGCACAGACTGGGCTCTGAAGGGGCAGGCTaGGGGGTAGACGTCGTCATGGATGTTGGATCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: DARHRLGSEGAG*GVDVVMDVGSP Trigger: GGGAGATCCAACATCCATGACGACGTCTACCCCCCAGCCTGCCCCTTCAGAGCCCAGTCTGTGCCTTGCGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000626198.1 |
||
| CDS CCA 72 bp | GGTCCCAAGTGGGCAATCCTGGAGCCTCCAGGTCTTTaGTCCAGCGGCGGGGTTTTCCACTCAAGGGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: GPKWAILEPPGL*SSGGVFHSRAT Trigger: TGTGGCCCTTGAGTGGAAAACCCCGCCGCTGGACCAAAGACCTGGAGGCTCCAGGATTGCCCACTTGGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000626198.1 |
||
| CDS CAA 90 bp | TTCCCTAGGCCTGAACACTGGGAAGGCACTGGCAGGGCCCCGGTTTaGATGGTGGATTCTTGGAGTAGGGGCCTTGGTAATAGGGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: FPRPEHWEGTGRAPV*MVDSWSRGLGNRAL Trigger: CAGAGCCCTATTACCAAGGCCCCTACTCCAAGAATCCACCATCAAAACCGGGGCCCTGCCAGTGCCTTCCCAGTGTTCAGGCCTAGGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000626198.1 |
||
| CDS CCA 72 bp | CCCTTAAAGTCAGGACCTCGCAGAACTTTCGCAAGATaGGTCCTCGGAGTCTGCCCGCGATTGCGCTCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: PLKSGPRRTFAR*VLGVCPRLRSQ Trigger: TTGGGAGCGCAATCGCGGGCAGACTCCGAGGACCCATCTTGCGAAAGTTCTGCGAGGTCCTGACTTTAAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000626198.1 |
||
| CDS CAA 90 bp | GGCCTTGGTAATAGGGCTCTGAGTGCTGGGGCAGAATGGGCTATCTaGACCCTTCATAGTCAGGGTCCCAAGTGGGCAATCCTGGAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GLGNRALSAGAEWAI*TLHSQGPKWAILEP Trigger: AGGCTCCAGGATTGCCCACTTGGGACCCTGACTATGAAGGGTCAAGATAGCCCATTCTGCCCCAGCACTCAGAGCCCTATTACCAAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626198.1 |
||
| CDS CCA 72 bp | GACGTCGTCATGGATGTTGGATCTCCCTTCCGGCCATaGCCCAAGTACGACCCCTGTTCCCTTAAAGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: DVVMDVGSPFRP*PKYDPCSLKVR Trigger: CCTGACTTTAAGGGAACAGGGGTCGTACTTGGGCCATGGCCGGAAGGGAGATCCAACATCCATGACGACGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626198.1 |
||
| CDS CAA 72 bp | CCTGAACACTGGGAAGGCACTGGCAGGGCCCCGGTTTaGATGGTGGATTCTTGGAGTAGGGGCCTTGGTAAT | + |
|
Preference number: 6 (lower is better) Translates to: PEHWEGTGRAPV*MVDSWSRGLGN Trigger: ATTACCAAGGCCCCTACTCCAAGAATCCACCATCAAAACCGGGGCCCTGCCAGTGCCTTCCCAGTGTTCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000626198.1 |
||
| CDS GCA 72 bp | AGGAAAATTCAGGTTGGGAACTGCTCAGGCCACACCTaGCTCCCATTCTATTCAGTCACCCCTCTGCTCATG | + |
|
Preference number: 6 (lower is better) Translates to: RKIQVGNCSGHT*LPFYSVTPLLM Trigger: CATGAGCAGAGGGGTGACTGAATAGAATGGGAGGCAGGTGTGGCCTGAGCAGTTCCCAACCTGAATTTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000626198.1 |
||
| CDS TCA 72 bp | TCGGAAGCGTCCCCATTACTAGTTCCTAGAATATGCTaGGATGTCTCAGGTTGCGGTGTGCAGCTGGGAGTT | + |
|
Preference number: 6 (lower is better) Translates to: SEASPLLVPRIC*DVSGCGVQLGV Trigger: AACTCCCAGCTGCACACCGCAACCTGAGACATCTCAGCATATTCTAGGAACTAGTAATGGGGACGCTTCCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626198.1 |
||
| CDS CCA 72 bp | ACAGCCTCAGGGAGTCCTGGCGACATGTGCCCAAGGTaGTCAGGGCACAGTTTGTTTTCATACATTTTAAGG | + |
|
Preference number: 6 (lower is better) Translates to: TASGSPGDMCPR*SGHSLFSYILR Trigger: CCTTAAAATGTATGAAAACAAACTGTGCCCTGACCACCTTGGGCACATGTCGCCAGGACTCCCTGAGGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000626198.1 |
||
| CDS TCA 72 bp | CAATCAGGTATGTGTCTATCTCAGCGAGCAGAGGAGTaGCTGAATAAAATGGGAGGCAGGTTTGCCCTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: QSGMCLSQRAEE*LNKMGGRFALS Trigger: ACTCAGGGCAAACCTGCCTCCCATTTTATTCAGTCACTCCTCTGCTCGCTGAGATAGACACATACCTGATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626198.1 |
||
| CDS GCA 72 bp | AATCACCAAGCTCAAAGGAAAATTCAGGTTGGGAACTaGTCAGGCCACACCTGCCTCCCATTCTATTCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: NHQAQRKIQVGN*SGHTCLPFYSV Trigger: GACTGAATAGAATGGGAGGCAGGTGTGGCCTGAGCAGTTCCCAACCTGAATTTTCCTTTGAGCTTGGTGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626198.1 |
||
| CDS CAA 72 bp | CCTGGCGACATGTGCCCAAGGTGGTCAGGGCACAGTTaGTTTTCATACATTTTAAGGAGACATGAGACATCA | + |
|
Preference number: 6 (lower is better) Translates to: PGDMCPRWSGHS*FSYILRRHETS Trigger: TGATGTCTCATGTCTCCTTAAAATGTATGAAAACAAACTGTGCCCTGACCACCTTGGGCACATGTCGCCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000626198.1 |
||
| CDS TCA 72 bp | GTAGCTGAGAGACAAATGGTTGCATTATTTTGTTTCTaGCAAGCCTCTCCAAAGGAGGCAATCAGGTATGTG | + |
|
Preference number: 6 (lower is better) Translates to: VAERQMVALFCF*QASPKEAIRYV Trigger: CACATACCTGATTGCCTCCTTTGGAGAGGCTTGTCAGAAACAAAATAATGCAACCATTTGTCTCTCAGCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000626198.1 |
||