RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LINC01143 (Homo sapiens)

Ensembl gene IDs: ENSG00000237751

Ensembl transcript IDs: ENST00000449073.2

Found 24 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp AGGTCTCCCTTCCCGCAGATGTCGCCTGGAGAAATGGAGCCCGGATaGTCAGGCGCGCGGCGTGGTATCCCCAAACCCGGGACCTCTGTT +
Preference number: 5 (lower is better)
Translates to: RSPFPQMSPGEMEPG*SGARRGIPKPGTSV
Trigger: AACAGAGGTCCCGGGTTTGGGGATACCACGCCGCGCGCCTGAGCATCCGGGCTCCATTTCTCCAGGCGACATCTGCGGGAAGGGAGACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449073.2
CDS CCA 90 bp CCTTGGCCTTTAGGTCTCCCTTCCCGCAGATGTCGCCTGGAGAAATaGAGCCCGGATGCTCAGGCGCGCGGCGTGGTATCCCCAAACCCG +
Preference number: 5 (lower is better)
Translates to: PWPLGLPSRRCRLEK*SPDAQARGVVSPNP
Trigger: CGGGTTTGGGGATACCACGCCGCGCGCCTGAGCATCCGGGCTCCATTTCTCCAGGCGACATCTGCGGGAAGGGAGACCTAAAGGCCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449073.2
CDS CCA 90 bp CTTTGTGGGTCCGATGGGTTTCTGGCGGTACTGTGGGATGCGAAGTaGGCGCCTCACTCGGAAACCCCGGCCTTGGTGGATGATCTCTCG +
Preference number: 5 (lower is better)
Translates to: LCGSDGFLAVLWDAK*APHSETPALVDDLS
Trigger: CGAGAGATCATCCACCAAGGCCGGGGTTTCCGAGTGAGGCGCCCACTTCGCATCCCACAGTACCGCCAGAAACCCATCGGACCCACAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449073.2
CDS GCA 90 bp TCTTTCCTGCGCCCTCACTGCGCGCCAGCCACTTGGGAGAGTGCTTaGTTCCCCACAGCGTCGCCAGTTTGGTGTGTTACCGAAGATTTT +
Preference number: 5 (lower is better)
Translates to: SFLRPHCAPATWESA*FPTASPVWCVTEDF
Trigger: AAAATCTTCGGTAACACACCAAACTGGCGACGCTGTGGGGAAGCAAGCACTCTCCCAAGTGGCTGGCGCGCAGTGAGGGCGCAGGAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449073.2
CDS GCA 90 bp TTTTTCTTTCCTGCGCCCTCACTGCGCGCCAGCCACTTGGGAGAGTaGTTGCTTCCCCACAGCGTCGCCAGTTTGGTGTGTTACCGAAGA +
Preference number: 5 (lower is better)
Translates to: FFFPAPSLRASHLGE*LLPHSVASLVCYRR
Trigger: TCTTCGGTAACACACCAAACTGGCGACGCTGTGGGGAAGCAAGCACTCTCCCAAGTGGCTGGCGCGCAGTGAGGGCGCAGGAAAGAAAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449073.2
CDS CCA 90 bp GAAGATTTTGATCTTTGTGGGTCCGATGGGTTTCTGGCGGTACTGTaGGATGCGAAGTGGGCGCCTCACTCGGAAACCCCGGCCTTGGTG +
Preference number: 5 (lower is better)
Translates to: EDFDLCGSDGFLAVL*DAKWAPHSETPALV
Trigger: CACCAAGGCCGGGGTTTCCGAGTGAGGCGCCCACTTCGCATCCCACAGTACCGCCAGAAACCCATCGGACCCACAAAGATCAAAATCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449073.2
CDS CCA 90 bp GGTGTGTTACCGAAGATTTTGATCTTTGTGGGTCCGATGGGTTTCTaGCGGTACTGTGGGATGCGAAGTGGGCGCCTCACTCGGAAACCC +
Preference number: 5 (lower is better)
Translates to: GVLPKILIFVGPMGF*RYCGMRSGRLTRKP
Trigger: GGGTTTCCGAGTGAGGCGCCCACTTCGCATCCCACAGTACCGCCAGAAACCCATCGGACCCACAAAGATCAAAATCTTCGGTAACACACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449073.2
CDS CCA 90 bp CCAGCCACTTGGGAGAGTGCTTGCTTCCCCACAGCGTCGCCAGTTTaGTGTGTTACCGAAGATTTTGATCTTTGTGGGTCCGATGGGTTT +
Preference number: 5 (lower is better)
Translates to: PATWESACFPTASPV*CVTEDFDLCGSDGF
Trigger: AAACCCATCGGACCCACAAAGATCAAAATCTTCGGTAACACACCAAACTGGCGACGCTGTGGGGAAGCAAGCACTCTCCCAAGTGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449073.2
CDS GCA 72 bp TTCCCGCAGATGTCGCCTGGAGAAATGGAGCCCGGATaGTCAGGCGCGCGGCGTGGTATCCCCAAACCCGGG +
Preference number: 6 (lower is better)
Translates to: FPQMSPGEMEPG*SGARRGIPKPG
Trigger: CCCGGGTTTGGGGATACCACGCCGCGCGCCTGAGCATCCGGGCTCCATTTCTCCAGGCGACATCTGCGGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449073.2
CDS GCA 72 bp CCTGCGCCCTCACTGCGCGCCAGCCACTTGGGAGAGTaGTTGCTTCCCCACAGCGTCGCCAGTTTGGTGTGT +
Preference number: 6 (lower is better)
Translates to: PAPSLRASHLGE*LLPHSVASLVC
Trigger: ACACACCAAACTGGCGACGCTGTGGGGAAGCAAGCACTCTCCCAAGTGGCTGGCGCGCAGTGAGGGCGCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449073.2
CDS CCA 72 bp CCCCGGCCTTGGTGGATGATCTCTCGTCCCCAGCCTTaGCCTTTAGGTCTCCCTTCCCGCAGATGTCGCCTG +
Preference number: 6 (lower is better)
Translates to: PRPWWMISRPQP*PLGLPSRRCRL
Trigger: CAGGCGACATCTGCGGGAAGGGAGACCTAAAGGCCAAGGCTGGGGACGAGAGATCATCCACCAAGGCCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449073.2
CDS GCA 72 bp TTGTGGGTCCGATGGGTTTCTGGCGGTACTGTGGGATaGGAAGTGGGCGCCTCACTCGGAAACCCCGGCCTT +
Preference number: 6 (lower is better)
Translates to: LWVRWVSGGTVG*EVGASLGNPGL
Trigger: AAGGCCGGGGTTTCCGAGTGAGGCGCCCACTTCGCATCCCACAGTACCGCCAGAAACCCATCGGACCCACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449073.2
CDS CCA 72 bp TCCGATGGGTTTCTGGCGGTACTGTGGGATGCGAAGTaGGCGCCTCACTCGGAAACCCCGGCCTTGGTGGAT +
Preference number: 6 (lower is better)
Translates to: SDGFLAVLWDAK*APHSETPALVD
Trigger: ATCCACCAAGGCCGGGGTTTCCGAGTGAGGCGCCCACTTCGCATCCCACAGTACCGCCAGAAACCCATCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449073.2
CDS CAA 72 bp ACCCCGGCCTTGGTGGATGATCTCTCGTCCCCAGCCTaGGCCTTTAGGTCTCCCTTCCCGCAGATGTCGCCT +
Preference number: 6 (lower is better)
Translates to: TPALVDDLSSPA*AFRSPFPQMSP
Trigger: AGGCGACATCTGCGGGAAGGGAGACCTAAAGGCCAAGGCTGGGGACGAGAGATCATCCACCAAGGCCGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449073.2
CDS CAA 72 bp GATGCGAAGTGGGCGCCTCACTCGGAAACCCCGGCCTaGGTGGATGATCTCTCGTCCCCAGCCTTGGCCTTT +
Preference number: 6 (lower is better)
Translates to: DAKWAPHSETPA*VDDLSSPALAF
Trigger: AAAGGCCAAGGCTGGGGACGAGAGATCATCCACCAAGGCCGGGGTTTCCGAGTGAGGCGCCCACTTCGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449073.2
CDS CCA 72 bp GATCTTTGTGGGTCCGATGGGTTTCTGGCGGTACTGTaGGATGCGAAGTGGGCGCCTCACTCGGAAACCCCG +
Preference number: 6 (lower is better)
Translates to: DLCGSDGFLAVL*DAKWAPHSETP
Trigger: CGGGGTTTCCGAGTGAGGCGCCCACTTCGCATCCCACAGTACCGCCAGAAACCCATCGGACCCACAAAGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449073.2
CDS CCA 72 bp TTTTCTTTCCTGCGCCCTCACTGCGCGCCAGCCACTTaGGAGAGTGCTTGCTTCCCCACAGCGTCGCCAGTT +
Preference number: 6 (lower is better)
Translates to: FSFLRPHCAPAT*ESACFPTASPV
Trigger: AACTGGCGACGCTGTGGGGAAGCAAGCACTCTCCCAAGTGGCTGGCGCGCAGTGAGGGCGCAGGAAAGAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449073.2
CDS CAA 90 bp TGCTCAGGCGCGCGGCGTGGTATCCCCAAACCCGGGACCTCTGTTTaGGGTCTGGTTGATTTTCCACGGAGAACCGAAGAGTCCGCTCCT +
Preference number: 6 (lower is better)
Translates to: CSGARRGIPKPGTSV*GLVDFPRRTEESAP
Trigger: AGGAGCGGACTCTTCGGTTCTCCGTGGAAAATCAACCAGACCCAAAACAGAGGTCCCGGGTTTGGGGATACCACGCCGCGCGCCTGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449073.2
CDS CAA 90 bp TTCTTTCCTGCGCCCTCACTGCGCGCCAGCCACTTGGGAGAGTGCTaGCTTCCCCACAGCGTCGCCAGTTTGGTGTGTTACCGAAGATTT +
Preference number: 6 (lower is better)
Translates to: FFPAPSLRASHLGEC*LPHSVASLVCYRRF
Trigger: AAATCTTCGGTAACACACCAAACTGGCGACGCTGTGGGGAAGCAAGCACTCTCCCAAGTGGCTGGCGCGCAGTGAGGGCGCAGGAAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449073.2
CDS CCA 72 bp AGTTTGCAAGTCCTTGGGGTAGATGGTGACGGGGGCTaGGGCGCGAGTGTGAAAGGACAGGAAAGGAAGGAG +
Preference number: 6 (lower is better)
Translates to: SLQVLGVDGDGG*GASVKGQERKE
Trigger: CTCCTTCCTTTCCTGTCCTTTCACACTCGCGCCCCAGCCCCCGTCACCATCTACCCCAAGGACTTGCAAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000449073.2
CDS CAA 72 bp GCGCGGCGTGGTATCCCCAAACCCGGGACCTCTGTTTaGGGTCTGGTTGATTTTCCACGGAGAACCGAAGAG +
Preference number: 6 (lower is better)
Translates to: ARRGIPKPGTSV*GLVDFPRRTEE
Trigger: CTCTTCGGTTCTCCGTGGAAAATCAACCAGACCCAAAACAGAGGTCCCGGGTTTGGGGATACCACGCCGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449073.2
CDS CCA 72 bp CCGAAGATTTTGATCTTTGTGGGTCCGATGGGTTTCTaGCGGTACTGTGGGATGCGAAGTGGGCGCCTCACT +
Preference number: 6 (lower is better)
Translates to: PKILIFVGPMGF*RYCGMRSGRLT
Trigger: AGTGAGGCGCCCACTTCGCATCCCACAGTACCGCCAGAAACCCATCGGACCCACAAAGATCAAAATCTTCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449073.2
CDS CCA 72 bp TGGGAGAGTGCTTGCTTCCCCACAGCGTCGCCAGTTTaGTGTGTTACCGAAGATTTTGATCTTTGTGGGTCC +
Preference number: 6 (lower is better)
Translates to: WESACFPTASPV*CVTEDFDLCGS
Trigger: GGACCCACAAAGATCAAAATCTTCGGTAACACACCAAACTGGCGACGCTGTGGGGAAGCAAGCACTCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449073.2
CDS CAA 72 bp CCACAGCGTCGCCAGTTTGGTGTGTTACCGAAGATTTaGATCTTTGTGGGTCCGATGGGTTTCTGGCGGTAC +
Preference number: 6 (lower is better)
Translates to: PQRRQFGVLPKI*IFVGPMGFWRY
Trigger: GTACCGCCAGAAACCCATCGGACCCACAAAGATCAAAATCTTCGGTAACACACCAAACTGGCGACGCTGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449073.2