RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LINC01142 (Homo sapiens)

Ensembl gene IDs: ENSG00000224286

Ensembl transcript IDs: ENST00000440404.6, ENST00000451439.1

Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp GATTTGCCTTCTGCTTTGCTAACCTCAGGATACTGGCCAGCCAGATaGAAAGACTGCCAAGCACATCCAGCTCATGTAGCCAGAAGGCCA +
Preference number: 5 (lower is better)
Translates to: DLPSALLTSGYWPAR*KDCQAHPAHVARRP
Trigger: TGGCCTTCTGGCTACATGAGCTGGATGTGCTTGGCAGTCTTTCCATCTGGCTGGCCAGTATCCTGAGGTTAGCAAAGCAGAAGGCAAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440404.6
CDS TCA 90 bp CACCCCAATGATTTCAAGAGCACATTGCAGCCTAGTCTCCACAAGTaGACAAGCTGTGAGAGCTGGAAATCTGCAGCTCCTCTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: HPNDFKSTLQPSLHK*TSCESWKSAAPLLL
Trigger: GAGCAGGAGAGGAGCTGCAGATTTCCAGCTCTCACAGCTTGTTCACTTGTGGAGACTAGGCTGCAATGTGCTCTTGAAATCATTGGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440404.6
CDS CCA 90 bp ATGTTTGGCCCAAACGTGTGTAATTATGAAGTTTCCCTTGGGATCTaGGGTGGTGGGATGGGGATAGTTCTTGGTGCCTGGTGCACACAG +
Preference number: 5 (lower is better)
Translates to: MFGPNVCNYEVSLGI*GGGMGIVLGAWCTQ
Trigger: CTGTGTGCACCAGGCACCAAGAACTATCCCCATCCCACCACCCCAGATCCCAAGGGAAACTTCATAATTACACACGTTTGGGCCAAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440404.6
CDS GCA 90 bp ACTGGCACGTGCACATGTCTTTTAGCTCCCCAAAGATTTGCCTTCTaGTTTGCTAACCTCAGGATACTGGCCAGCCAGATGGAAAGACTG +
Preference number: 5 (lower is better)
Translates to: TGTCTCLLAPQRFAF*FANLRILASQMERL
Trigger: CAGTCTTTCCATCTGGCTGGCCAGTATCCTGAGGTTAGCAAAGCAGAAGGCAAATCTTTGGGGAGCTAAAAGACATGTGCACGTGCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440404.6
CDS GCA 90 bp ATGCACTGGGTAGGAGACGAAACTTCCTTCTCATATCTCCTTCCTTaGTTTGGTGGTGGACTGGCCACATCTTCAGGTCACATAGGAATC +
Preference number: 5 (lower is better)
Translates to: MHWVGDETSFSYLLP*FGGGLATSSGHIGI
Trigger: GATTCCTATGTGACCTGAAGATGTGGCCAGTCCACCACCAAAGCAAGGAAGGAGATATGAGAAGGAAGTTTCGTCTCCTACCCAGTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440404.6
CDS GCA 90 bp GATGAGAAGCAGAAGGCATTGGTTTGCTTCTCAAATTCCCAGCTCTaGTTCTCACTGTTGCCAGTAATGATGCACTGGGTAGGAGACGAA +
Preference number: 5 (lower is better)
Translates to: DEKQKALVCFSNSQL*FSLLPVMMHWVGDE
Trigger: TTCGTCTCCTACCCAGTGCATCATTACTGGCAACAGTGAGAAGCAGAGCTGGGAATTTGAGAAGCAAACCAATGCCTTCTGCTTCTCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440404.6
CDS GCA 90 bp ATTTCCTCAGAAACAAGGCCCACCCCAATGATTTCAAGAGCACATTaGAGCCTAGTCTCCACAAGTGAACAAGCTGTGAGAGCTGGAAAT +
Preference number: 5 (lower is better)
Translates to: ISSETRPTPMISRAH*SLVSTSEQAVRAGN
Trigger: ATTTCCAGCTCTCACAGCTTGTTCACTTGTGGAGACTAGGCTGCAATGTGCTCTTGAAATCATTGGGGTGGGCCTTGTTTCTGAGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440404.6
CDS CCA 90 bp ACACCAAAGATCATCATTACCCAGGGTCTCTCCTTGGAGGGGACTTaGTGCACATGTGCCAAGCAGTATTCTAAGTACTTCTCACATGTT +
Preference number: 5 (lower is better)
Translates to: TPKIIITQGLSLEGT*CTCAKQYSKYFSHV
Trigger: AACATGTGAGAAGTACTTAGAATACTGCTTGGCACATGTGCACCAAGTCCCCTCCAAGGAGAGACCCTGGGTAATGATGATCTTTGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440404.6
ENST00000451439.1
CDS TCA 90 bp AGGTCACATAGGAATCACGAGGATCCAGTTCTTAAGAATCTTAGTTaGCACCAAAGATCATCATTACCCAGGGTCTCTCCTTGGAGGGGA +
Preference number: 5 (lower is better)
Translates to: RSHRNHEDPVLKNLS*HQRSSLPRVSPWRG
Trigger: TCCCCTCCAAGGAGAGACCCTGGGTAATGATGATCTTTGGTGTCAACTAAGATTCTTAAGAACTGGATCCTCGTGATTCCTATGTGACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440404.6
ENST00000451439.1
CDS GCA 90 bp CCAAAGATCATCATTACCCAGGGTCTCTCCTTGGAGGGGACTTGGTaGACATGTGCCAAGCAGTATTCTAAGTACTTCTCACATGTTATT +
Preference number: 5 (lower is better)
Translates to: PKIIITQGLSLEGTW*TCAKQYSKYFSHVI
Trigger: AATAACATGTGAGAAGTACTTAGAATACTGCTTGGCACATGTGCACCAAGTCCCCTCCAAGGAGAGACCCTGGGTAATGATGATCTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440404.6
ENST00000451439.1
CDS GCA 90 bp GCCTTTCAGAATGTTGAGCCACCAAGCATGCTGTTGGATAATTATTaGTTTGTGATGATATTCAGCAACTCTCACAATGTGGACCACCAG +
Preference number: 5 (lower is better)
Translates to: AFQNVEPPSMLLDNY*FVMIFSNSHNVDHQ
Trigger: CTGGTGGTCCACATTGTGAGAGTTGCTGAATATCATCACAAAGCAATAATTATCCAACAGCATGCTTGGTGGCTCAACATTCTGAAAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440404.6
ENST00000451439.1
CDS GCA 90 bp TTGATTTGGAACTGTCACCACCAAGAGAGAAAATGTCTGGAATACTaGAGTGTCATTTCTGGGCAGTCTGTCTTTTATGACTTGTCATGC +
Preference number: 5 (lower is better)
Translates to: LIWNCHHQERKCLEY*SVISGQSVFYDLSC
Trigger: GCATGACAAGTCATAAAAGACAGACTGCCCAGAAATGACACTGCAGTATTCCAGACATTTTCTCTCTTGGTGGTGACAGTTCCAAATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440404.6
CDS GCA 90 bp TACTGCAGTGTCATTTCTGGGCAGTCTGTCTTTTATGACTTGTCATaGACTACTAAAGGGAGACAAGTGAATACTGTGTACATGAAATCA +
Preference number: 5 (lower is better)
Translates to: YCSVISGQSVFYDLS*TTKGRQVNTVYMKS
Trigger: TGATTTCATGTACACAGTATTCACTTGTCTCCCTTTAGTAGTGCATGACAAGTCATAAAAGACAGACTGCCCAGAAATGACACTGCAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440404.6
CDS CCA 72 bp CCTTGGGATCTGGGGTGGTGGGATGGGGATAGTTCTTaGTGCCTGGTGCACACAGTTTGTGTCTCGGGAGAA +
Preference number: 6 (lower is better)
Translates to: PWDLGWWDGDSS*CLVHTVCVSGE
Trigger: TTCTCCCGAGACACAAACTGTGTGCACCAGGCACCAAGAACTATCCCCATCCCACCACCCCAGATCCCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440404.6
CDS GCA 72 bp TGGGATCTGGGGTGGTGGGATGGGGATAGTTCTTGGTaGCTGGTGCACACAGTTTGTGTCTCGGGAGAAGAA +
Preference number: 6 (lower is better)
Translates to: WDLGWWDGDSSW*LVHTVCVSGEE
Trigger: TTCTTCTCCCGAGACACAAACTGTGTGCACCAGGCACCAAGAACTATCCCCATCCCACCACCCCAGATCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440404.6
CDS TCA 72 bp TCCCATGCCCTGCATCATTCTTTCATCCCTAGGGGCTaGTGTGTCCATTTCCTGTGGGGTAGATGTTTGGCC +
Preference number: 6 (lower is better)
Translates to: SHALHHSFIPRG*CVHFLWGRCLA
Trigger: GGCCAAACATCTACCCCACAGGAAATGGACACATCAGCCCCTAGGGATGAAAGAATGATGCAGGGCATGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440404.6
CDS CCA 72 bp TCTGCTTTGCTAACCTCAGGATACTGGCCAGCCAGATaGAAAGACTGCCAAGCACATCCAGCTCATGTAGCC +
Preference number: 6 (lower is better)
Translates to: SALLTSGYWPAR*KDCQAHPAHVA
Trigger: GGCTACATGAGCTGGATGTGCTTGGCAGTCTTTCCATCTGGCTGGCCAGTATCCTGAGGTTAGCAAAGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440404.6
CDS CCA 72 bp CCAAACGTGTGTAATTATGAAGTTTCCCTTGGGATCTaGGGTGGTGGGATGGGGATAGTTCTTGGTGCCTGG +
Preference number: 6 (lower is better)
Translates to: PNVCNYEVSLGI*GGGMGIVLGAW
Trigger: CCAGGCACCAAGAACTATCCCCATCCCACCACCCCAGATCCCAAGGGAAACTTCATAATTACACACGTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440404.6
CDS TCA 72 bp GGTTCCCGGCTGAGTATCAGAAGCGACCACAGAAGGTaGAGGTTTGCCTCTTTTCTGTCTGTTGTCAGGAAT +
Preference number: 6 (lower is better)
Translates to: GSRLSIRSDHRR*RFASFLSVVRN
Trigger: ATTCCTGACAACAGACAGAAAAGAGGCAAACCTTCACCTTCTGTGGTCGCTTCTGATACTCAGCCGGGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440404.6
CDS TCA 72 bp GGGAAATCTGTAGCTACTGAGAATGAGGTTCCCGGCTaGGTATCAGAAGCGACCACAGAAGGTGAAGGTTTG +
Preference number: 6 (lower is better)
Translates to: GKSVATENEVPG*VSEATTEGEGL
Trigger: CAAACCTTCACCTTCTGTGGTCGCTTCTGATACTCAGCCGGGAACCTCATTCTCAGTAGCTACAGATTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440404.6
CDS CAA 72 bp TTGACACCAAAGATCATCATTACCCAGGGTCTCTCCTaGGAGGGGACTTGGTGCACATGTGCCAAGCAGTAT +
Preference number: 6 (lower is better)
Translates to: LTPKIIITQGLS*EGTWCTCAKQY
Trigger: ATACTGCTTGGCACATGTGCACCAAGTCCCCTCCAAGGAGAGACCCTGGGTAATGATGATCTTTGGTGTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440404.6
ENST00000451439.1
CDS TCA 72 bp GATTTCAAGAGCACATTGCAGCCTAGTCTCCACAAGTaGACAAGCTGTGAGAGCTGGAAATCTGCAGCTCCT +
Preference number: 6 (lower is better)
Translates to: DFKSTLQPSLHK*TSCESWKSAAP
Trigger: AGGAGCTGCAGATTTCCAGCTCTCACAGCTTGTTCACTTGTGGAGACTAGGCTGCAATGTGCTCTTGAAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440404.6
CDS TCA 72 bp GCTCCCATCAGCAACATGGTTGAGACTATGTGCCCTTaGCATTTGCCTTTCAGAATGTTGAGCCACCAAGCA +
Preference number: 6 (lower is better)
Translates to: APISNMVETMCP*HLPFRMLSHQA
Trigger: TGCTTGGTGGCTCAACATTCTGAAAGGCAAATGTCAAGGGCACATAGTCTCAACCATGTTGCTGATGGGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440404.6
ENST00000451439.1
CDS GCA 72 bp ATCATTACCCAGGGTCTCTCCTTGGAGGGGACTTGGTaGACATGTGCCAAGCAGTATTCTAAGTACTTCTCA +
Preference number: 6 (lower is better)
Translates to: IITQGLSLEGTW*TCAKQYSKYFS
Trigger: TGAGAAGTACTTAGAATACTGCTTGGCACATGTGCACCAAGTCCCCTCCAAGGAGAGACCCTGGGTAATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440404.6
ENST00000451439.1
CDS GCA 72 bp GAAACAAGGCCCACCCCAATGATTTCAAGAGCACATTaGAGCCTAGTCTCCACAAGTGAACAAGCTGTGAGA +
Preference number: 6 (lower is better)
Translates to: ETRPTPMISRAH*SLVSTSEQAVR
Trigger: TCTCACAGCTTGTTCACTTGTGGAGACTAGGCTGCAATGTGCTCTTGAAATCATTGGGGTGGGCCTTGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440404.6
CDS CCA 72 bp AGACGAAACTTCCTTCTCATATCTCCTTCCTTGCTTTaGTGGTGGACTGGCCACATCTTCAGGTCACATAGG +
Preference number: 6 (lower is better)
Translates to: RRNFLLISPSLL*WWTGHIFRSHR
Trigger: CCTATGTGACCTGAAGATGTGGCCAGTCCACCACCAAAGCAAGGAAGGAGATATGAGAAGGAAGTTTCGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440404.6
CDS CCA 72 bp AAAGATTTGCCTTCTGCTTTGCTAACCTCAGGATACTaGCCAGCCAGATGGAAAGACTGCCAAGCACATCCA +
Preference number: 6 (lower is better)
Translates to: KDLPSALLTSGY*PARWKDCQAHP
Trigger: TGGATGTGCTTGGCAGTCTTTCCATCTGGCTGGCCAGTATCCTGAGGTTAGCAAAGCAGAAGGCAAATCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440404.6
CDS CCA 72 bp AACTTCCTTCTCATATCTCCTTCCTTGCTTTGGTGGTaGACTGGCCACATCTTCAGGTCACATAGGAATCAC +
Preference number: 6 (lower is better)
Translates to: NFLLISPSLLWW*TGHIFRSHRNH
Trigger: GTGATTCCTATGTGACCTGAAGATGTGGCCAGTCCACCACCAAAGCAAGGAAGGAGATATGAGAAGGAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440404.6
CDS CCA 72 bp CGAAACTTCCTTCTCATATCTCCTTCCTTGCTTTGGTaGTGGACTGGCCACATCTTCAGGTCACATAGGAAT +
Preference number: 6 (lower is better)
Translates to: RNFLLISPSLLW*WTGHIFRSHRN
Trigger: ATTCCTATGTGACCTGAAGATGTGGCCAGTCCACCACCAAAGCAAGGAAGGAGATATGAGAAGGAAGTTTCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440404.6
CDS CCA 72 bp CAGCTCTGCTTCTCACTGTTGCCAGTAATGATGCACTaGGTAGGAGACGAAACTTCCTTCTCATATCTCCTT +
Preference number: 6 (lower is better)
Translates to: QLCFSLLPVMMH*VGDETSFSYLL
Trigger: AAGGAGATATGAGAAGGAAGTTTCGTCTCCTACCCAGTGCATCATTACTGGCAACAGTGAGAAGCAGAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440404.6
CDS CAA 90 bp CTGAGTTTCTCCTACTGGTATATAGGCTCTCAGGCTTCTGTGAATTaGTCTTCTTTCTCACTCAGGAGATTTCTCTGCTTTCCCATGCCC +
Preference number: 6 (lower is better)
Translates to: LSFSYWYIGSQASVN*SSFSLRRFLCFPMP
Trigger: GGGCATGGGAAAGCAGAGAAATCTCCTGAGTGAGAAAGAAGACAAATTCACAGAAGCCTGAGAGCCTATATACCAGTAGGAGAAACTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440404.6
CDS CAA 90 bp CACTTCGACAAATGCTTTGACTTAAAAGCACTGAGCCAGCTTGATTaGGAACTGTCACCACCAAGAGAGAAAATGTCTGGAATACTGCAG +
Preference number: 6 (lower is better)
Translates to: HFDKCFDLKALSQLD*ELSPPREKMSGILQ
Trigger: CTGCAGTATTCCAGACATTTTCTCTCTTGGTGGTGACAGTTCCAAATCAAGCTGGCTCAGTGCTTTTAAGTCAAAGCATTTGTCGAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440404.6
CDS TCA 72 bp AGGAATCACGAGGATCCAGTTCTTAAGAATCTTAGTTaGCACCAAAGATCATCATTACCCAGGGTCTCTCCT +
Preference number: 6 (lower is better)
Translates to: RNHEDPVLKNLS*HQRSSLPRVSP
Trigger: AGGAGAGACCCTGGGTAATGATGATCTTTGGTGTCAACTAAGATTCTTAAGAACTGGATCCTCGTGATTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440404.6
ENST00000451439.1
CDS GCA 72 bp AACTGTCACCACCAAGAGAGAAAATGTCTGGAATACTaGAGTGTCATTTCTGGGCAGTCTGTCTTTTATGAC +
Preference number: 6 (lower is better)
Translates to: NCHHQERKCLEY*SVISGQSVFYD
Trigger: GTCATAAAAGACAGACTGCCCAGAAATGACACTGCAGTATTCCAGACATTTTCTCTCTTGGTGGTGACAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440404.6
CDS CAA 90 bp CTGGAATACTGCAGTGTCATTTCTGGGCAGTCTGTCTTTTATGACTaGTCATGCACTACTAAAGGGAGACAAGTGAATACTGTGTACATG +
Preference number: 6 (lower is better)
Translates to: LEYCSVISGQSVFYD*SCTTKGRQVNTVYM
Trigger: CATGTACACAGTATTCACTTGTCTCCCTTTAGTAGTGCATGACAAGTCATAAAAGACAGACTGCCCAGAAATGACACTGCAGTATTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440404.6
CDS CAA 72 bp TCAGCAACTCTCACAATGTGGACCACCAGTTCTGGTTaGGGTTTCTTCTTTTTATTAGGACCATCTGAGAAT +
Preference number: 6 (lower is better)
Translates to: SATLTMWTTSSG*GFFFLLGPSEN
Trigger: ATTCTCAGATGGTCCTAATAAAAAGAAGAAACCCAAACCAGAACTGGTGGTCCACATTGTGAGAGTTGCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000440404.6
ENST00000451439.1
CDS CAA 90 bp CCCTTGACATTTGCCTTTCAGAATGTTGAGCCACCAAGCATGCTGTaGGATAATTATTGCTTTGTGATGATATTCAGCAACTCTCACAAT +
Preference number: 6 (lower is better)
Translates to: PLTFAFQNVEPPSML*DNYCFVMIFSNSHN
Trigger: ATTGTGAGAGTTGCTGAATATCATCACAAAGCAATAATTATCCAACAGCATGCTTGGTGGCTCAACATTCTGAAAGGCAAATGTCAAGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440404.6
ENST00000451439.1