Pregenerated sensors for LINC01141 (Homo sapiens)
Ensembl gene IDs: ENSG00000236963Ensembl transcript IDs: ENST00000418743.5, ENST00000423486.1, ENST00000426428.5, ENST00000635564.2, ENST00000635577.2, ENST00000652870.1, ENST00000660748.1, ENST00000661413.1, ENST00000662632.1, ENST00000666314.1, ENST00000670217.1
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | ACTGAGGGCCACGGCCTAGGCAGCAGTGCCAAAGACCCAGAGTCCTaGCCATCAGCCCTCCCCCACCACCAGTGCTGCGAGGCCAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: TEGHGLGSSAKDPES*PSALPHHQCCEASS Trigger: TGAGCTGGCCTCGCAGCACTGGTGGTGGGGGAGGGCTGATGGTCAGGACTCTGGGTCTTTGGCACTGCTGCCTAGGCCGTGGCCCTCAGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000670217.1 |
||
| CDS CCA 90 bp | GCCCTCCAAGCCTGCTGTTCTGATACCGTTCAGCAGAGGGCGCTGTaGGCGTGCACTGCCTTCCAGGCCCGGACCAGCTCCTGCCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: ALQACCSDTVQQRAL*ACTAFQARTSSCQR Trigger: CCTTTGGCAGGAGCTGGTCCGGGCCTGGAAGGCAGTGCACGCCCACAGCGCCCTCTGCTGAACGGTATCAGAACAGCAGGCTTGGAGGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426428.5 |
||
| CDS GCA 90 bp | CAAGCCTGCTGTTCTGATACCGTTCAGCAGAGGGCGCTGTGGGCGTaGACTGCCTTCCAGGCCCGGACCAGCTCCTGCCAAAGGCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: QACCSDTVQQRALWA*TAFQARTSSCQRHL Trigger: CAGATGCCTTTGGCAGGAGCTGGTCCGGGCCTGGAAGGCAGTGCACGCCCACAGCGCCCTCTGCTGAACGGTATCAGAACAGCAGGCTTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426428.5 |
||
| CDS TCA 90 bp | GGGATCCTTTGCAGGAATTGCCTTCGCCCTCCAAGCCTGCTGTTCTaGTACCGTTCAGCAGAGGGCGCTGTGGGCGTGCACTGCCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GILCRNCLRPPSLLF*YRSAEGAVGVHCLP Trigger: TGGAAGGCAGTGCACGCCCACAGCGCCCTCTGCTGAACGGTATCAGAACAGCAGGCTTGGAGGGCGAAGGCAATTCCTGCAAAGGATCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426428.5 |
||
| CDS GCA 90 bp | GGAAACCAGGGATCCTTTGCAGGAATTGCCTTCGCCCTCCAAGCCTaGTGTTCTGATACCGTTCAGCAGAGGGCGCTGTGGGCGTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: GNQGSFAGIAFALQA*CSDTVQQRALWACT Trigger: AGTGCACGCCCACAGCGCCCTCTGCTGAACGGTATCAGAACAGCAGGCTTGGAGGGCGAAGGCAATTCCTGCAAAGGATCCCTGGTTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426428.5 |
||
| CDS GCA 90 bp | CTAACCACCCCCTACGCTACTCCCAAGCTCCAAGATCCTCCAGGTTaGACATATGGGTCCTCTCGGGTGCTGACCCAGGCTCCATCTACC | + |
|
Preference number: 5 (lower is better) Translates to: LTTPYATPKLQDPPG*TYGSSRVLTQAPST Trigger: GGTAGATGGAGCCTGGGTCAGCACCCGAGAGGACCCATATGTGCAACCTGGAGGATCTTGGAGCTTGGGAGTAGCGTAGGGGGTGGTTAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000426428.5 |
||
| CDS GCA 90 bp | CACGGTTTCTCTGCAGCGGTTCCTCCCCTCTTAGGTGGCTCAGTCTaGTCCGGACTCAGCTGTGCCTCTCATCATCCAGTCTGTGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: HGFSAAVPPLLGGSV*SGLSCASHHPVCEE Trigger: CTCCTCACAGACTGGATGATGAGAGGCACAGCTGAGTCCGGAGCAGACTGAGCCACCTAAGAGGGGAGGAACCGCTGCAGAGAAACCGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000666314.1 ENST00000670217.1 |
||
| CDS TCA 90 bp | TTGGCTGGGCCACTTAACCTCTCTGGGCTCTTATCTCCGCATCTGTaGGGAGGAGAAACTCGGAGTGCGGCCGGGCTTAGTCCTTGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LAGPLNLSGLLSPHL*GGETRSAAGLSPCS Trigger: ACTGCAAGGACTAAGCCCGGCCGCACTCCGAGTTTCTCCTCCTCACAGATGCGGAGATAAGAGCCCAGAGAGGTTAAGTGGCCCAGCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635564.2 |
||
| CDS GCA 90 bp | CACGGTTTCTCTGCAGCGGTTCCTCCCCTCTTAGGTGGCTCAGTCTaGTCCGGACTCAGCTGTGCCTCTCATCATCCAGTCAAGTTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: HGFSAAVPPLLGGSV*SGLSCASHHPVKLH Trigger: GTGCAACTTGACTGGATGATGAGAGGCACAGCTGAGTCCGGAGCAGACTGAGCCACCTAAGAGGGGAGGAACCGCTGCAGAGAAACCGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426428.5 |
||
| CDS CCA 90 bp | GGGTCCTCTCGGGTGCTGACCCAGGCTCCATCTACCCTTCATTCCTaGCTTCAGAATCTGGGGTTTCCCATGGGTAGGAAACCAGGGATC | + |
|
Preference number: 5 (lower is better) Translates to: GSSRVLTQAPSTLHS*LQNLGFPMGRKPGI Trigger: GATCCCTGGTTTCCTACCCATGGGAAACCCCAGATTCTGAAGCCAGGAATGAAGGGTAGATGGAGCCTGGGTCAGCACCCGAGAGGACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426428.5 |
||
| CDS CCA 90 bp | CCCCTACGCTACTCCCAAGCTCCAAGATCCTCCAGGTTGCACATATaGGTCCTCTCGGGTGCTGACCCAGGCTCCATCTACCCTTCATTC | + |
|
Preference number: 5 (lower is better) Translates to: PLRYSQAPRSSRLHI*VLSGADPGSIYPSF Trigger: GAATGAAGGGTAGATGGAGCCTGGGTCAGCACCCGAGAGGACCCATATGTGCAACCTGGAGGATCTTGGAGCTTGGGAGTAGCGTAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426428.5 |
||
| CDS TCA 90 bp | TCTGAGCCTCAGCCCCTATCTCTCTTTGGCTGCCACTGTGCTGTGTaGTCTTGGCTGGGCCACTTAACCTCTCTGGGCTCTTATCTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: SEPQPLSLFGCHCAV*SWLGHLTSLGSYLR Trigger: GCGGAGATAAGAGCCCAGAGAGGTTAAGTGGCCCAGCCAAGATCACACAGCACAGTGGCAGCCAAAGAGAGATAGGGGCTGAGGCTCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635564.2 |
||
| CDS CCA 90 bp | AAAGAACTCTGTAGGAGACGAAGTCAGCCCGACAGTTCAGGATTCTaGGTCTCCTGGGTCCTCCGTCCCACAGTACCCCACTCCCTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: KELCRRRSQPDSSGF*VSWVLRPTVPHSLQ Trigger: TTGGAGGGAGTGGGGTACTGTGGGACGGAGGACCCAGGAGACCCAGAATCCTGAACTGTCGGGCTGACTTCGTCTCCTACAGAGTTCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426428.5 |
||
| CDS TCA 90 bp | AGCTCCAAGATCCTCCAGGTTGCACATATGGGTCCTCTCGGGTGCTaGCCCAGGCTCCATCTACCCTTCATTCCTGGCTTCAGAATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSKILQVAHMGPLGC*PRLHLPFIPGFRIW Trigger: CCAGATTCTGAAGCCAGGAATGAAGGGTAGATGGAGCCTGGGTCAGCACCCGAGAGGACCCATATGTGCAACCTGGAGGATCTTGGAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426428.5 |
||
| CDS CCA 90 bp | AAAGGCTTAACACGGTTTCTCTGCAGCGGTTCCTCCCCTCTTAGGTaGCTCAGTCTGCTCCGGACTCAGCTGTGCCTCTCATCATCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: KGLTRFLCSGSSPLR*LSLLRTQLCLSSSS Trigger: ACTGGATGATGAGAGGCACAGCTGAGTCCGGAGCAGACTGAGCCACCTAAGAGGGGAGGAACCGCTGCAGAGAAACCGTGTTAAGCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000426428.5 ENST00000666314.1 ENST00000670217.1 |
||
| CDS CCA 90 bp | TCAGCAATAAATGTCCACTGTGCCTGGCCTTGGGGCTGGGAACACTaGAGTGGCTCACATAGTTCCTTGCCTCTGGGGACACAGCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SAINVHCAWPWGWEH*SGSHSSLPLGTQQS Trigger: ACTCTGCTGTGTCCCCAGAGGCAAGGAACTATGTGAGCCACTCCAGTGTTCCCAGCCCCAAGGCCAGGCACAGTGGACATTTATTGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660748.1 |
||
| CDS TCA 90 bp | TCCAATCATGCTTGGAAGTCTCCTCCAGGGCAGGATGCTGTTAGGTaGAAGGCACTTAGAAGAGACCTCCTGTCACCAGCCACCAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SNHAWKSPPGQDAVR*KALRRDLLSPATRS Trigger: GCTCCTGGTGGCTGGTGACAGGAGGTCTCTTCTAAGTGCCTTTCACCTAACAGCATCCTGCCCTGGAGGAGACTTCCAAGCATGATTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426428.5 |
||
| CDS TCA 90 bp | GGGAAACCTGAGCTCCGCTGGGCTCAATTAATCCGTATCCTGGTCTaGAACGGAGAGAAAATGCCAAGTCGAGTCCAGCCTAGCTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: GKPELRWAQLIRILV*NGEKMPSRVQPSSA Trigger: GGCAGAGCTAGGCTGGACTCGACTTGGCATTTTCTCTCCGTTTCAGACCAGGATACGGATTAATTGAGCCCAGCGGAGCTCAGGTTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426428.5 |
||
| CDS CCA 90 bp | CCACACTCCAGCCTGGGCAGCATATTGAGACTCCATAGTTCCACGTaGCTTGAGAGGCCTCACAATCACCGTGGAAGGCAAAAGGCACAT | + |
|
Preference number: 5 (lower is better) Translates to: PHSSLGSILRLHSST*LERPHNHRGRQKAH Trigger: ATGTGCCTTTTGCCTTCCACGGTGATTGTGAGGCCTCTCAAGCCACGTGGAACTATGGAGTCTCAATATGCTGCCCAGGCTGGAGTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426428.5 |
||
| CDS GCA 90 bp | CTTGTTCTCCCTCTGGAACTTCAAAAAGGCTTAACACGGTTTCTCTaGAGCGGTTCCTCCCCTCTTAGGTGGCTCAGTCTGCTCCGGACT | + |
|
Preference number: 5 (lower is better) Translates to: LVLPLELQKGLTRFL*SGSSPLRWLSLLRT Trigger: AGTCCGGAGCAGACTGAGCCACCTAAGAGGGGAGGAACCGCTGCAGAGAAACCGTGTTAAGCCTTTTTGAAGTTCCAGAGGGAGAACAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000426428.5 ENST00000666314.1 ENST00000670217.1 |
||
| CDS CCA 90 bp | GACACTCTTATTACACGTATGTGTGTCCTGTCTCCCCCATCGGATTaGGAGCTCCAATCATGCTTGGAAGTCTCCTCCAGGGCAGGATGC | + |
|
Preference number: 5 (lower is better) Translates to: DTLITRMCVLSPPSD*ELQSCLEVSSRAGC Trigger: GCATCCTGCCCTGGAGGAGACTTCCAAGCATGATTGGAGCTCCCAATCCGATGGGGGAGACAGGACACACATACGTGTAATAAGAGTGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000426428.5 |
||
| CDS CCA 90 bp | TCAGCAATAAATGTCCACTGTGCCTGGCCTTGGGGCTGGGAACACTaGAGTGGCTCACATAGTTCCTTGCCTCAGCAGAGTAACCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SAINVHCAWPWGWEH*SGSHSSLPQQSNLG Trigger: TCCAAGGTTACTCTGCTGAGGCAAGGAACTATGTGAGCCACTCCAGTGTTCCCAGCCCCAAGGCCAGGCACAGTGGACATTTATTGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000635564.2 ENST00000652870.1 |
||
| CDS CCA 90 bp | TTCATTCATTCAGCAATAAATGTCCACTGTGCCTGGCCTTGGGGCTaGGAACACTGGAGTGGCTCACATAGTTCCTTGCCTCTGGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: FIHSAINVHCAWPWG*EHWSGSHSSLPLGT Trigger: TGTCCCCAGAGGCAAGGAACTATGTGAGCCACTCCAGTGTTCCCAGCCCCAAGGCCAGGCACAGTGGACATTTATTGCTGAATGAATGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000418743.5 ENST00000426428.5 ENST00000635577.2 ENST00000660748.1 ENST00000661413.1 ENST00000662632.1 |
||
| CDS CCA 90 bp | TGGCACAATGAAAGGAGAGAACATAGCCCAGTTTCTGGCAATGGCTaGTACCTCAGACATGCAGAATCTCCAGCAGAGGGGCAGGTATCC | + |
|
Preference number: 5 (lower is better) Translates to: WHNERREHSPVSGNG*YLRHAESPAEGQVS Trigger: GGATACCTGCCCCTCTGCTGGAGATTCTGCATGTCTGAGGTACCAGCCATTGCCAGAAACTGGGCTATGTTCTCTCCTTTCATTGTGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000418743.5 ENST00000635564.2 ENST00000635577.2 ENST00000652870.1 ENST00000660748.1 ENST00000661413.1 ENST00000662632.1 |
||
| CDS CCA 90 bp | TCACGGGTGAAGAACACATTGAGGAAAGCAGGTTCTCGGGGCTCCTaGGTTAAAGAACTCTGTAGGAGACGAAGTCAGCCCGACAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SRVKNTLRKAGSRGS*VKELCRRRSQPDSS Trigger: TGAACTGTCGGGCTGACTTCGTCTCCTACAGAGTTCTTTAACCCAGGAGCCCCGAGAACCTGCTTTCCTCAATGTGTTCTTCACCCGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426428.5 |
||
| CDS GCA 90 bp | GGTTCCTCCCCTCTTAGGTGGCTCAGTCTGCTCCGGACTCAGCTGTaGCTCTCATCATCCAGTCAAGTTGCACTTATTCATTTATTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GSSPLRWLSLLRTQL*LSSSSQVALIHLFS Trigger: GCTGAATAAATGAATAAGTGCAACTTGACTGGATGATGAGAGGCACAGCTGAGTCCGGAGCAGACTGAGCCACCTAAGAGGGGAGGAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426428.5 |
||
| CDS CCA 90 bp | TGTGTGTGTGTGTGTGTGTGTGTCTGTGTGTGTGTCCTGCTGGGATaGCAATTAGGATGTCCTAGTCCCTCACGGGTGAAGAACACATTG | + |
|
Preference number: 5 (lower is better) Translates to: CVCVCVCVCVCVLLG*QLGCPSPSRVKNTL Trigger: CAATGTGTTCTTCACCCGTGAGGGACTAGGACATCCTAATTGCCATCCCAGCAGGACACACACACAGACACACACACACACACACACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426428.5 |
||
| CDS CCA 90 bp | TTCATTCATTCAGCAATAAATGTCCACTGTGCCTGGCCTTGGGGCTaGGAACACTGGAGTGGCTCACATAGTTCCTTGCCTCAGCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: FIHSAINVHCAWPWG*EHWSGSHSSLPQQS Trigger: ACTCTGCTGAGGCAAGGAACTATGTGAGCCACTCCAGTGTTCCCAGCCCCAAGGCCAGGCACAGTGGACATTTATTGCTGAATGAATGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000635564.2 ENST00000652870.1 |
||
| CDS CCA 90 bp | CAGAAACATTGCAGCGATGTGCTAAGGGCTCCTAATGGGAAAAATTaGAGGAGCCCCCAGGCTGAAGCTGACATGGTAAACAGAAACCCT | + |
|
Preference number: 5 (lower is better) Translates to: QKHCSDVLRAPNGKN*RSPQAEADMVNRNP Trigger: AGGGTTTCTGTTTACCATGTCAGCTTCAGCCTGGGGGCTCCTCCAATTTTTCCCATTAGGAGCCCTTAGCACATCGCTGCAATGTTTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000426428.5 |
||
| CDS TCA 90 bp | AGAAATCTCAGCTCTTTCAAAGACACGGCAAGGATGAAGGGAAGTTaGTGGCTGTGGAGTCCTTTACACAGTACCCAGAGCAGAGTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: RNLSSFKDTARMKGS*WLWSPLHSTQSRVN Trigger: GTTCACTCTGCTCTGGGTACTGTGTAAAGGACTCCACAGCCATCAACTTCCCTTCATCCTTGCCGTGTCTTTGAAAGAGCTGAGATTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000418743.5 ENST00000426428.5 ENST00000635564.2 ENST00000660748.1 ENST00000661413.1 ENST00000662632.1 ENST00000666314.1 ENST00000670217.1 |
||
| CDS TCA 90 bp | ATTTTGCAGATCTATCATCCTCTGCAGCTTTCTGATCCTCTCTCTTaGTTCATTCATTCAGCAATAAATGTCCACTGTGCCTGGCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ILQIYHPLQLSDPLS*FIHSAINVHCAWPW Trigger: CCAAGGCCAGGCACAGTGGACATTTATTGCTGAATGAATGAATCAAGAGAGAGGATCAGAAAGCTGCAGAGGATGATAGATCTGCAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000418743.5 ENST00000426428.5 ENST00000635564.2 ENST00000635577.2 ENST00000652870.1 ENST00000660748.1 ENST00000661413.1 ENST00000662632.1 |
||
| CDS CCA 90 bp | TTTCCTCAAAATCAATCATCCCTTTTCAGATTTGAGGGAGGACAATaGACTATAATAGGAATTCCCAATAAGCCAGAAACATTGCAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: FPQNQSSLFRFEGGQ*TIIGIPNKPETLQR Trigger: TCGCTGCAATGTTTCTGGCTTATTGGGAATTCCTATTATAGTCCATTGTCCTCCCTCAAATCTGAAAAGGGATGATTGATTTTGAGGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000426428.5 |
||
| CDS CCA 72 bp | GCCTGCTGTTCTGATACCGTTCAGCAGAGGGCGCTGTaGGCGTGCACTGCCTTCCAGGCCCGGACCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ACCSDTVQQRAL*ACTAFQARTSS Trigger: GGAGCTGGTCCGGGCCTGGAAGGCAGTGCACGCCCACAGCGCCCTCTGCTGAACGGTATCAGAACAGCAGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426428.5 |
||
| CDS TCA 72 bp | CACGGCCTAGGCAGCAGTGCCAAAGACCCAGAGTCCTaGCCATCAGCCCTCCCCCACCACCAGTGCTGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: HGLGSSAKDPES*PSALPHHQCCE Trigger: CTCGCAGCACTGGTGGTGGGGGAGGGCTGATGGTCAGGACTCTGGGTCTTTGGCACTGCTGCCTAGGCCGTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000670217.1 |
||
| CDS GCA 72 bp | TGTTCTGATACCGTTCAGCAGAGGGCGCTGTGGGCGTaGACTGCCTTCCAGGCCCGGACCAGCTCCTGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: CSDTVQQRALWA*TAFQARTSSCQ Trigger: TTGGCAGGAGCTGGTCCGGGCCTGGAAGGCAGTGCACGCCCACAGCGCCCTCTGCTGAACGGTATCAGAACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426428.5 |
||
| CDS TCA 72 bp | TGCAGGAATTGCCTTCGCCCTCCAAGCCTGCTGTTCTaGTACCGTTCAGCAGAGGGCGCTGTGGGCGTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: CRNCLRPPSLLF*YRSAEGAVGVH Trigger: GTGCACGCCCACAGCGCCCTCTGCTGAACGGTATCAGAACAGCAGGCTTGGAGGGCGAAGGCAATTCCTGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426428.5 |
||
| CDS CCA 72 bp | CGAAGTCAGCCCGACAGTTCAGGATTCTGGGTCTCCTaGGTCCTCCGTCCCACAGTACCCCACTCCCTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: RSQPDSSGFWVS*VLRPTVPHSLQ Trigger: TTGGAGGGAGTGGGGTACTGTGGGACGGAGGACCCAGGAGACCCAGAATCCTGAACTGTCGGGCTGACTTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426428.5 |
||
| CDS CAA 72 bp | CCCCTACGCTACTCCCAAGCTCCAAGATCCTCCAGGTaGCACATATGGGTCCTCTCGGGTGCTGACCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: PLRYSQAPRSSR*HIWVLSGADPG Trigger: GCCTGGGTCAGCACCCGAGAGGACCCATATGTGCAACCTGGAGGATCTTGGAGCTTGGGAGTAGCGTAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426428.5 |
||
| CDS GCA 72 bp | TCTGCAGCGGTTCCTCCCCTCTTAGGTGGCTCAGTCTaGTCCGGACTCAGCTGTGCCTCTCATCATCCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: SAAVPPLLGGSV*SGLSCASHHPV Trigger: GACTGGATGATGAGAGGCACAGCTGAGTCCGGAGCAGACTGAGCCACCTAAGAGGGGAGGAACCGCTGCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000426428.5 ENST00000666314.1 ENST00000670217.1 |
||
| CDS CCA 72 bp | ACACGGTTTCTCTGCAGCGGTTCCTCCCCTCTTAGGTaGCTCAGTCTGCTCCGGACTCAGCTGTGCCTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: TRFLCSGSSPLR*LSLLRTQLCLS Trigger: TGAGAGGCACAGCTGAGTCCGGAGCAGACTGAGCCACCTAAGAGGGGAGGAACCGCTGCAGAGAAACCGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000426428.5 ENST00000666314.1 ENST00000670217.1 |
||
| CDS CCA 72 bp | TGTAGGAGACGAAGTCAGCCCGACAGTTCAGGATTCTaGGTCTCCTGGGTCCTCCGTCCCACAGTACCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: CRRRSQPDSSGF*VSWVLRPTVPH Trigger: GTGGGGTACTGTGGGACGGAGGACCCAGGAGACCCAGAATCCTGAACTGTCGGGCTGACTTCGTCTCCTACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426428.5 |
||
| CDS CCA 72 bp | TGGCAAGGAGTTCAGAGCGGCTTTTCACAGGGTCCCTaGGAGGCAGTCAGGACCAGCTCCCCCTCATTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: WQGVQSGFSQGP*EAVRTSSPSFH Trigger: GTGAAATGAGGGGGAGCTGGTCCTGACTGCCTCCCAGGGACCCTGTGAAAAGCCGCTCTGAACTCCTTGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000670217.1 |
||
| CDS CAA 90 bp | ACTAACCACCCCCTACGCTACTCCCAAGCTCCAAGATCCTCCAGGTaGCACATATGGGTCCTCTCGGGTGCTGACCCAGGCTCCATCTAC | + |
|
Preference number: 6 (lower is better) Translates to: TNHPLRYSQAPRSSR*HIWVLSGADPGSIY Trigger: GTAGATGGAGCCTGGGTCAGCACCCGAGAGGACCCATATGTGCAACCTGGAGGATCTTGGAGCTTGGGAGTAGCGTAGGGGGTGGTTAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000426428.5 |
||
| CDS GCA 72 bp | GGATCCTTTGCAGGAATTGCCTTCGCCCTCCAAGCCTaGTGTTCTGATACCGTTCAGCAGAGGGCGCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: GSFAGIAFALQA*CSDTVQQRALW Trigger: CCACAGCGCCCTCTGCTGAACGGTATCAGAACAGCAGGCTTGGAGGGCGAAGGCAATTCCTGCAAAGGATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426428.5 |
||
| CDS GCA 72 bp | GGGGCTGGGAACACTGGAGTGGCTCACATAGTTCCTTaGCTCAGCAGAGTAACCTTGGACATGCCACGGACC | + |
|
Preference number: 6 (lower is better) Translates to: GAGNTGVAHIVP*LSRVTLDMPRT Trigger: GGTCCGTGGCATGTCCAAGGTTACTCTGCTGAGGCAAGGAACTATGTGAGCCACTCCAGTGTTCCCAGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000635564.2 ENST00000652870.1 |
||
| CDS CAA 90 bp | GCCTCAGCCCCTATCTCTCTTTGGCTGCCACTGTGCTGTGTGATCTaGGCTGGGCCACTTAACCTCTCTGGGCTCTTATCTCCGCATCTG | + |
|
Preference number: 6 (lower is better) Translates to: ASAPISLWLPLCCVI*AGPLNLSGLLSPHL Trigger: CAGATGCGGAGATAAGAGCCCAGAGAGGTTAAGTGGCCCAGCCAAGATCACACAGCACAGTGGCAGCCAAAGAGAGATAGGGGCTGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635564.2 |
||
| CDS TCA 72 bp | ATCCTCCAGGTTGCACATATGGGTCCTCTCGGGTGCTaGCCCAGGCTCCATCTACCCTTCATTCCTGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ILQVAHMGPLGC*PRLHLPFIPGF Trigger: GAAGCCAGGAATGAAGGGTAGATGGAGCCTGGGTCAGCACCCGAGAGGACCCATATGTGCAACCTGGAGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426428.5 |
||
| CDS TCA 72 bp | CCACTTAACCTCTCTGGGCTCTTATCTCCGCATCTGTaGGGAGGAGAAACTCGGAGTGCGGCCGGGCTTAGT | + |
|
Preference number: 6 (lower is better) Translates to: PLNLSGLLSPHL*GGETRSAAGLS Trigger: ACTAAGCCCGGCCGCACTCCGAGTTTCTCCTCCTCACAGATGCGGAGATAAGAGCCCAGAGAGGTTAAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635564.2 |
||
| CDS TCA 72 bp | CAGCCCCTATCTCTCTTTGGCTGCCACTGTGCTGTGTaGTCTTGGCTGGGCCACTTAACCTCTCTGGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: QPLSLFGCHCAV*SWLGHLTSLGS Trigger: AGAGCCCAGAGAGGTTAAGTGGCCCAGCCAAGATCACACAGCACAGTGGCAGCCAAAGAGAGATAGGGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635564.2 |
||
| CDS GCA 72 bp | GGGGCTGGGAACACTGGAGTGGCTCACATAGTTCCTTaGCTCTGGGGACACAGCAGAGTAACCTTGGACATG | + |
|
Preference number: 6 (lower is better) Translates to: GAGNTGVAHIVP*LWGHSRVTLDM Trigger: CATGTCCAAGGTTACTCTGCTGTGTCCCCAGAGGCAAGGAACTATGTGAGCCACTCCAGTGTTCCCAGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660748.1 |
||
| CDS CCA 72 bp | GGGAACACTGGAGTGGCTCACATAGTTCCTTGCCTCTaGGGACACAGCAGAGTAACCTTGGACATGCCACGG | + |
|
Preference number: 6 (lower is better) Translates to: GNTGVAHIVPCL*GHSRVTLDMPR Trigger: CCGTGGCATGTCCAAGGTTACTCTGCTGTGTCCCCAGAGGCAAGGAACTATGTGAGCCACTCCAGTGTTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660748.1 |
||
| CDS CCA 72 bp | GAAATGCTGGATTGTGGCACCGGCAAACCTCCTCTCTaGCAAGGAGTTCAGAGCGGCTTTTCACAGGGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: EMLDCGTGKPPL*QGVQSGFSQGP Trigger: GGGACCCTGTGAAAAGCCGCTCTGAACTCCTTGCCAGAGAGGAGGTTTGCCGGTGCCACAATCCAGCATTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670217.1 |
||
| CDS CAA 72 bp | TGGGGCTGGGAACACTGGAGTGGCTCACATAGTTCCTaGCCTCAGCAGAGTAACCTTGGACATGCCACGGAC | + |
|
Preference number: 6 (lower is better) Translates to: WGWEHWSGSHSS*PQQSNLGHATD Trigger: GTCCGTGGCATGTCCAAGGTTACTCTGCTGAGGCAAGGAACTATGTGAGCCACTCCAGTGTTCCCAGCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000635564.2 ENST00000652870.1 |
||
| CDS TCA 72 bp | GCTTGGAAGTCTCCTCCAGGGCAGGATGCTGTTAGGTaGAAGGCACTTAGAAGAGACCTCCTGTCACCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: AWKSPPGQDAVR*KALRRDLLSPA Trigger: GGCTGGTGACAGGAGGTCTCTTCTAAGTGCCTTTCACCTAACAGCATCCTGCCCTGGAGGAGACTTCCAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426428.5 |
||
| CDS CAA 72 bp | TGGGGCTGGGAACACTGGAGTGGCTCACATAGTTCCTaGCCTCTGGGGACACAGCAGAGTAACCTTGGACAT | + |
|
Preference number: 6 (lower is better) Translates to: WGWEHWSGSHSS*PLGTQQSNLGH Trigger: ATGTCCAAGGTTACTCTGCTGTGTCCCCAGAGGCAAGGAACTATGTGAGCCACTCCAGTGTTCCCAGCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660748.1 |
||
| CDS CCA 72 bp | TCAGCAATAAATGTCCACTGTGCCTGGCCTTGGGGCTaGGAACACTGGAGTGGCTCACATAGTTCCTTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SAINVHCAWPWG*EHWSGSHSSLP Trigger: AGGCAAGGAACTATGTGAGCCACTCCAGTGTTCCCAGCCCCAAGGCCAGGCACAGTGGACATTTATTGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000418743.5 ENST00000426428.5 ENST00000635564.2 ENST00000635577.2 ENST00000652870.1 ENST00000660748.1 ENST00000661413.1 ENST00000662632.1 |
||
| CDS CAA 90 bp | GGACACTCTTATTACACGTATGTGTGTCCTGTCTCCCCCATCGGATaGGGAGCTCCAATCATGCTTGGAAGTCTCCTCCAGGGCAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: GHSYYTYVCPVSPIG*GAPIMLGSLLQGRM Trigger: CATCCTGCCCTGGAGGAGACTTCCAAGCATGATTGGAGCTCCCAATCCGATGGGGGAGACAGGACACACATACGTGTAATAAGAGTGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000426428.5 |
||
| CDS TCA 72 bp | GAGCTCCGCTGGGCTCAATTAATCCGTATCCTGGTCTaGAACGGAGAGAAAATGCCAAGTCGAGTCCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: ELRWAQLIRILV*NGEKMPSRVQP Trigger: AGGCTGGACTCGACTTGGCATTTTCTCTCCGTTTCAGACCAGGATACGGATTAATTGAGCCCAGCGGAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426428.5 |
||
| CDS GCA 72 bp | CCTCTGGAACTTCAAAAAGGCTTAACACGGTTTCTCTaGAGCGGTTCCTCCCCTCTTAGGTGGCTCAGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: PLELQKGLTRFL*SGSSPLRWLSL Trigger: CAGACTGAGCCACCTAAGAGGGGAGGAACCGCTGCAGAGAAACCGTGTTAAGCCTTTTTGAAGTTCCAGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000426428.5 ENST00000666314.1 ENST00000670217.1 |
||
| CDS CCA 72 bp | ATTACACGTATGTGTGTCCTGTCTCCCCCATCGGATTaGGAGCTCCAATCATGCTTGGAAGTCTCCTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ITRMCVLSPPSD*ELQSCLEVSSR Trigger: CCTGGAGGAGACTTCCAAGCATGATTGGAGCTCCCAATCCGATGGGGGAGACAGGACACACATACGTGTAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000426428.5 |
||
| CDS CCA 72 bp | TGCAGCGATGTGCTAAGGGCTCCTAATGGGAAAAATTaGAGGAGCCCCCAGGCTGAAGCTGACATGGTAAAC | + |
|
Preference number: 6 (lower is better) Translates to: CSDVLRAPNGKN*RSPQAEADMVN Trigger: GTTTACCATGTCAGCTTCAGCCTGGGGGCTCCTCCAATTTTTCCCATTAGGAGCCCTTAGCACATCGCTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000426428.5 |
||
| CDS CAA 72 bp | CCTATCTCTCTTTGGCTGCCACTGTGCTGTGTGATCTaGGCTGGGCCACTTAACCTCTCTGGGCTCTTATCT | + |
|
Preference number: 6 (lower is better) Translates to: PISLWLPLCCVI*AGPLNLSGLLS Trigger: AGATAAGAGCCCAGAGAGGTTAAGTGGCCCAGCCAAGATCACACAGCACAGTGGCAGCCAAAGAGAGATAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635564.2 |
||
| CDS CAA 90 bp | GGATGGCAATTAGGATGTCCTAGTCCCTCACGGGTGAAGAACACATaGAGGAAAGCAGGTTCTCGGGGCTCCTGGGTTAAAGAACTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: GWQLGCPSPSRVKNT*RKAGSRGSWVKELC Trigger: ACAGAGTTCTTTAACCCAGGAGCCCCGAGAACCTGCTTTCCTCAATGTGTTCTTCACCCGTGAGGGACTAGGACATCCTAATTGCCATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426428.5 |
||
| CDS TCA 72 bp | GTGGGACACCCCAGATACCAGAAGCAACAAGGTTCCTaGTTTAATGGAGCACCTGTAGTCCCAGCTACTTGG | + |
|
Preference number: 6 (lower is better) Translates to: VGHPRYQKQQGS*FNGAPVVPATW Trigger: CCAAGTAGCTGGGACTACAGGTGCTCCATTAAATCAGGAACCTTGTTGCTTCTGGTATCTGGGGTGTCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426428.5 |
||
| CDS TCA 72 bp | AAGTTGTTTAAAACGGCTTCCTCAGCCATCCCGAACTaGACTAACCACCCCCTACGCTACTCCCAAGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: KLFKTASSAIPN*TNHPLRYSQAP Trigger: TGGAGCTTGGGAGTAGCGTAGGGGGTGGTTAGTTCAGTTCGGGATGGCTGAGGAAGCCGTTTTAAACAACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000426428.5 |
||
| CDS TCA 72 bp | GACCCTTTCAAAGACACGGCAAGGATGAAGGGAAGTTaGTGGCTGTGGAGTCCTTTACACAGTACCCAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: DPFKDTARMKGS*WLWSPLHSTQS Trigger: GCTCTGGGTACTGTGTAAAGGACTCCACAGCCATCAACTTCCCTTCATCCTTGCCGTGTCTTTGAAAGGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635577.2 ENST00000652870.1 |
||
| CDS GCA 72 bp | CCTCTTAGGTGGCTCAGTCTGCTCCGGACTCAGCTGTaGCTCTCATCATCCAGTCAAGTTGCACTTATTCAT | + |
|
Preference number: 6 (lower is better) Translates to: PLRWLSLLRTQL*LSSSSQVALIH Trigger: ATGAATAAGTGCAACTTGACTGGATGATGAGAGGCACAGCTGAGTCCGGAGCAGACTGAGCCACCTAAGAGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000426428.5 |
||
| CDS CCA 72 bp | ATTCATTCAGCAATAAATGTCCACTGTGCCTGGCCTTaGGGCTGGGAACACTGGAGTGGCTCACATAGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: IHSAINVHCAWP*GWEHWSGSHSS Trigger: GGAACTATGTGAGCCACTCCAGTGTTCCCAGCCCCAAGGCCAGGCACAGTGGACATTTATTGCTGAATGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000418743.5 ENST00000426428.5 ENST00000635564.2 ENST00000635577.2 ENST00000652870.1 ENST00000660748.1 ENST00000661413.1 ENST00000662632.1 |
||
| CDS CAA 72 bp | TATTACACGTATGTGTGTCCTGTCTCCCCCATCGGATaGGGAGCTCCAATCATGCTTGGAAGTCTCCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: YYTYVCPVSPIG*GAPIMLGSLLQ Trigger: CTGGAGGAGACTTCCAAGCATGATTGGAGCTCCCAATCCGATGGGGGAGACAGGACACACATACGTGTAATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000426428.5 |
||
| CDS CAA 72 bp | TTAGGATGTCCTAGTCCCTCACGGGTGAAGAACACATaGAGGAAAGCAGGTTCTCGGGGCTCCTGGGTTAAA | + |
|
Preference number: 6 (lower is better) Translates to: LGCPSPSRVKNT*RKAGSRGSWVK Trigger: TTTAACCCAGGAGCCCCGAGAACCTGCTTTCCTCAATGTGTTCTTCACCCGTGAGGGACTAGGACATCCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426428.5 |
||
| CDS TCA 72 bp | AGCTCTTTCAAAGACACGGCAAGGATGAAGGGAAGTTaGTGGCTGTGGAGTCCTTTACACAGTACCCAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSFKDTARMKGS*WLWSPLHSTQS Trigger: GCTCTGGGTACTGTGTAAAGGACTCCACAGCCATCAACTTCCCTTCATCCTTGCCGTGTCTTTGAAAGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000418743.5 ENST00000426428.5 ENST00000635564.2 ENST00000660748.1 ENST00000661413.1 ENST00000662632.1 ENST00000666314.1 ENST00000670217.1 |
||
| CDS CAA 90 bp | AACAGAGTGAGACCCTTTCAAAGACACGGCAAGGATGAAGGGAAGTaGATGGCTGTGGAGTCCTTTACACAGTACCCAGAGCAGAGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: NRVRPFQRHGKDEGK*MAVESFTQYPEQSE Trigger: TTCACTCTGCTCTGGGTACTGTGTAAAGGACTCCACAGCCATCAACTTCCCTTCATCCTTGCCGTGTCTTTGAAAGGGTCTCACTCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000635577.2 ENST00000652870.1 |
||
| CDS CAA 90 bp | AAGAAATCTCAGCTCTTTCAAAGACACGGCAAGGATGAAGGGAAGTaGATGGCTGTGGAGTCCTTTACACAGTACCCAGAGCAGAGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: KKSQLFQRHGKDEGK*MAVESFTQYPEQSE Trigger: TTCACTCTGCTCTGGGTACTGTGTAAAGGACTCCACAGCCATCAACTTCCCTTCATCCTTGCCGTGTCTTTGAAAGAGCTGAGATTTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000418743.5 ENST00000426428.5 ENST00000635564.2 ENST00000660748.1 ENST00000661413.1 ENST00000662632.1 ENST00000666314.1 ENST00000670217.1 |
||
| CDS TCA 72 bp | ACTGTGGCGCTGACTGCCTCTGGGTTTAATTTATGTTaGGATGAGGAAGGATCTGGCTGTGTTTTTCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: TVALTASGFNLC*DEEGSGCVFLL Trigger: AAGGAGAAAAACACAGCCAGATCCTTCCTCATCTCAACATAAATTAAACCCAGAGGCAGTCAGCGCCACAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 11 transcripts: ENST00000418743.5 ENST00000423486.1 ENST00000426428.5 ENST00000635564.2 ENST00000635577.2 ENST00000652870.1 ENST00000660748.1 ENST00000661413.1 ENST00000662632.1 ENST00000666314.1 ENST00000670217.1 |
||
| CDS CAA 72 bp | GTTGAGATGAGGAAGGATCTGGCTGTGTTTTTCTCCTaGAACCACTGTGATGTAAAGAAATCTCAGCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: VEMRKDLAVFFS*NHCDVKKSQLW Trigger: CCAGAGCTGAGATTTCTTTACATCACAGTGGTTCAAGGAGAAAAACACAGCCAGATCCTTCCTCATCTCAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000423486.1 |
||
| CDS CAA 72 bp | GTTGAGATGAGGAAGGATCTGGCTGTGTTTTTCTCCTaGAACCACTGTGATGTAAAGAAATCTCAGCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: VEMRKDLAVFFS*NHCDVKKSQLC Trigger: ACAGAGCTGAGATTTCTTTACATCACAGTGGTTCAAGGAGAAAAACACAGCCAGATCCTTCCTCATCTCAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000635577.2 ENST00000652870.1 |
||
| CDS CAA 90 bp | TTAATTTATGTTGAGATGAGGAAGGATCTGGCTGTGTTTTTCTCCTaGAACCACTGTGATGTAAAGAAATCTCAGCTCTGGGGAACAGGG | + |
|
Preference number: 6 (lower is better) Translates to: LIYVEMRKDLAVFFS*NHCDVKKSQLWGTG Trigger: CCCTGTTCCCCAGAGCTGAGATTTCTTTACATCACAGTGGTTCAAGGAGAAAAACACAGCCAGATCCTTCCTCATCTCAACATAAATTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000423486.1 |
||
| CDS CAA 72 bp | GTTGAGATGAGGAAGGATCTGGCTGTGTTTTTCTCCTaGAACCACTGTGATGTAAAGAAATCTCAGCTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: VEMRKDLAVFFS*NHCDVKKSQLF Trigger: AAAGAGCTGAGATTTCTTTACATCACAGTGGTTCAAGGAGAAAAACACAGCCAGATCCTTCCTCATCTCAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000418743.5 ENST00000426428.5 ENST00000635564.2 ENST00000660748.1 ENST00000661413.1 ENST00000662632.1 ENST00000666314.1 ENST00000670217.1 |
||
| CDS CAA 90 bp | TTAATTTATGTTGAGATGAGGAAGGATCTGGCTGTGTTTTTCTCCTaGAACCACTGTGATGTAAAGAAATCTCAGCTCTTTCAAAGACAC | + |
|
Preference number: 6 (lower is better) Translates to: LIYVEMRKDLAVFFS*NHCDVKKSQLFQRH Trigger: GTGTCTTTGAAAGAGCTGAGATTTCTTTACATCACAGTGGTTCAAGGAGAAAAACACAGCCAGATCCTTCCTCATCTCAACATAAATTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000418743.5 ENST00000426428.5 ENST00000635564.2 ENST00000660748.1 ENST00000661413.1 ENST00000662632.1 ENST00000666314.1 ENST00000670217.1 |
||
| CDS CAA 90 bp | TTAATTTATGTTGAGATGAGGAAGGATCTGGCTGTGTTTTTCTCCTaGAACCACTGTGATGTAAAGAAATCTCAGCTCTGTGATTTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: LIYVEMRKDLAVFFS*NHCDVKKSQLCDLQ Trigger: TTGCAAATCACAGAGCTGAGATTTCTTTACATCACAGTGGTTCAAGGAGAAAAACACAGCCAGATCCTTCCTCATCTCAACATAAATTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000635577.2 ENST00000652870.1 |
||
| CDS CCA 72 bp | AATCAATCATCCCTTTTCAGATTTGAGGGAGGACAATaGACTATAATAGGAATTCCCAATAAGCCAGAAACA | + |
|
Preference number: 6 (lower is better) Translates to: NQSSLFRFEGGQ*TIIGIPNKPET Trigger: TGTTTCTGGCTTATTGGGAATTCCTATTATAGTCCATTGTCCTCCCTCAAATCTGAAAAGGGATGATTGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000426428.5 |
||