Pregenerated sensors for LINC01140 (Homo sapiens)
Ensembl gene IDs: ENSG00000267272Ensembl transcript IDs: ENST00000461990.1, ENST00000467438.1, ENST00000469312.6, ENST00000471417.5, ENST00000476432.5, ENST00000484933.6, ENST00000490006.6, ENST00000587165.1, ENST00000589455.5, ENST00000590653.5, ENST00000619924.1
Found 132 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GTGAAGGACGGCAGGGCCTCCCGAGGCCGCCGCGCCGGGACAGCCTaGCCGAGCAGCACCGAGACGAGGCCGGCGCCCACCGCCCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: VKDGRASRGRRAGTA*PSSTETRPAPTAPA Trigger: GGCAGGGGCGGTGGGCGCCGGCCTCGTCTCGGTGCTGCTCGGTCAGGCTGTCCCGGCGCGGCGGCCTCGGGAGGCCCTGCCGTCCTTCAC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000467438.1 ENST00000619924.1 |
||
| CDS CCA 90 bp | CTGTGGTGTAGAACTCGCGGCAATGGAGACTCCCGACACTCCATGTaGCACAAGTCCCAGGTCCCGGCGGGCCAGCATCCGGCCTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LWCRTRGNGDSRHSM*HKSQVPAGQHPAFP Trigger: GGGGAAGGCCGGATGCTGGCCCGCCGGGACCTGGGACTTGTGCCACATGGAGTGTCGGGAGTCTCCATTGCCGCGAGTTCTACACCACAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000467438.1 ENST00000476432.5 ENST00000484933.6 ENST00000587165.1 ENST00000589455.5 ENST00000590653.5 ENST00000619924.1 |
||
| CDS CCA 90 bp | GGTGCTGGGGGCAGCGACCGATGGGGAGCAAACAGCCTGGCCCTGTaGTGTAGAACTCGCGGCAATGGAGACTCCCGACACTCCATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GAGGSDRWGANSLAL*CRTRGNGDSRHSMW Trigger: CCACATGGAGTGTCGGGAGTCTCCATTGCCGCGAGTTCTACACCACAGGGCCAGGCTGTTTGCTCCCCATCGGTCGCTGCCCCCAGCACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000467438.1 ENST00000476432.5 ENST00000484933.6 ENST00000587165.1 ENST00000589455.5 ENST00000590653.5 ENST00000619924.1 |
||
| CDS GCA 90 bp | AGCATACCCGGACAGCCCGGCACATGCGGAGGCACTTGCCGCTGCTaGCACTGCGCTATGACAAGGAGTTTTGTGCCTTCGGAGGAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: SIPGQPGTCGGTCRC*HCAMTRSFVPSEER Trigger: GCGCTCCTCCGAAGGCACAAAACTCCTTGTCATAGCGCAGTGGCAGCAGCGGCAAGTGCCTCCGCATGTGCCGGGCTGTCCGGGTATGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000461990.1 ENST00000484933.6 ENST00000590653.5 |
||
| CDS GCA 90 bp | GCCAGCATACCCGGACAGCCCGGCACATGCGGAGGCACTTGCCGCTaGTGCCACTGCGCTATGACAAGGAGTTTTGTGCCTTCGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ASIPGQPGTCGGTCR*CHCAMTRSFVPSEE Trigger: CTCCTCCGAAGGCACAAAACTCCTTGTCATAGCGCAGTGGCAGCAGCGGCAAGTGCCTCCGCATGTGCCGGGCTGTCCGGGTATGCTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000461990.1 ENST00000484933.6 ENST00000590653.5 |
||
| CDS GCA 90 bp | TCTCAGTGCAAAGCGGCTGCCAGCATACCCGGACAGCCCGGCACATaGGGAGGCACTTGCCGCTGCTGCCACTGCGCTATGACAAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: SQCKAAASIPGQPGT*GGTCRCCHCAMTRS Trigger: ACTCCTTGTCATAGCGCAGTGGCAGCAGCGGCAAGTGCCTCCGCATGTGCCGGGCTGTCCGGGTATGCTGGCAGCCGCTTTGCACTGAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000461990.1 ENST00000484933.6 ENST00000590653.5 |
||
| CDS CCA 90 bp | CTGGCTAAGGAGCGAGGAGACCATCACCTCAGAAAGCAGCCCCGCTaGGAGGTCCACGGAGCAGTTCGCCGAGCTGTGCACAGGCCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: LAKERGDHHLRKQPR*EVHGAVRRAVHRPF Trigger: AAAGGGCCTGTGCACAGCTCGGCGAACTGCTCCGTGGACCTCCCAGCGGGGCTGCTTTCTGAGGTGATGGTCTCCTCGCTCCTTAGCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000469312.6 ENST00000471417.5 ENST00000490006.6 |
||
| CDS CCA 90 bp | TCCCAAGAGCAGAGCAGAGGTCAGGATCCGCCTCTCCGAGGCTGCTaGCTCCTGAAACTGGGGCAGGGCTCTGTGCAGTTGGGACTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SQEQSRGQDPPLRGC*LLKLGQGSVQLGLP Trigger: TGGAAGTCCCAACTGCACAGAGCCCTGCCCCAGTTTCAGGAGCCAGCAGCCTCGGAGAGGCGGATCCTGACCTCTGCTCTGCTCTTGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000461990.1 ENST00000484933.6 ENST00000590653.5 |
||
| CDS CCA 90 bp | AACAACAGGGTGCTGGGGGCAGCGACCGATGGGGAGCAAACAGCCTaGCCCTGTGGTGTAGAACTCGCGGCAATGGAGACTCCCGACACT | + |
|
Preference number: 5 (lower is better) Translates to: NNRVLGAATDGEQTA*PCGVELAAMETPDT Trigger: AGTGTCGGGAGTCTCCATTGCCGCGAGTTCTACACCACAGGGCCAGGCTGTTTGCTCCCCATCGGTCGCTGCCCCCAGCACCCTGTTGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000467438.1 ENST00000476432.5 ENST00000484933.6 ENST00000587165.1 ENST00000589455.5 ENST00000590653.5 ENST00000619924.1 |
||
| CDS CCA 90 bp | GGGCAAAGGAAATGGGCGACGGGTAAATGGAGATGCAGCCGGGGATaGGAGAGGACGACCATCGACTGGGAAGCGGAAACCCCCTTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GQRKWATGKWRCSRG*ERTTIDWEAETPLR Trigger: CCGCAAGGGGGTTTCCGCTTCCCAGTCGATGGTCGTCCTCTCCCATCCCCGGCTGCATCTCCATTTACCCGTCGCCCATTTCCTTTGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000467438.1 ENST00000619924.1 |
||
| CDS CCA 90 bp | GGGACCGGGAGAAGGGAACGGAGACCCCAGTGGAGCCAAGGAGCCTaGATGGGCAAAGGAAATGGGCGACGGGTAAATGGAGATGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GTGRRERRPQWSQGA*MGKGNGRRVNGDAA Trigger: GGCTGCATCTCCATTTACCCGTCGCCCATTTCCTTTGCCCATCCAGGCTCCTTGGCTCCACTGGGGTCTCCGTTCCCTTCTCCCGGTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000467438.1 ENST00000619924.1 |
||
| CDS GCA 90 bp | CTATCCCAAGAGCAGAGCAGAGGTCAGGATCCGCCTCTCCGAGGCTaGTGGCTCCTGAAACTGGGGCAGGGCTCTGTGCAGTTGGGACTT | + |
|
Preference number: 5 (lower is better) Translates to: LSQEQSRGQDPPLRG*WLLKLGQGSVQLGL Trigger: AAGTCCCAACTGCACAGAGCCCTGCCCCAGTTTCAGGAGCCAGCAGCCTCGGAGAGGCGGATCCTGACCTCTGCTCTGCTCTTGGGATAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000461990.1 ENST00000484933.6 ENST00000590653.5 |
||
| CDS TCA 90 bp | TCCCAGGGGCTGGTGAGGTCTCTAGAGCTCCTTACCATCTGTGGGTaGCACTGGACCAGGATTGGGAACAGGGTGCAAGCGTGGCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SQGLVRSLELLTICG*HWTRIGNRVQAWPE Trigger: CTCTGGCCACGCTTGCACCCTGTTCCCAATCCTGGTCCAGTGTCACCCACAGATGGTAAGGAGCTCTAGAGACCTCACCAGCCCCTGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000461990.1 ENST00000467438.1 ENST00000471417.5 ENST00000476432.5 ENST00000484933.6 ENST00000589455.5 ENST00000590653.5 |
||
| CDS TCA 90 bp | AGCCCGGCACATGCGGAGGCACTTGCCGCTGCTGCCACTGCGCTATaGCAAGGAGTTTTGTGCCTTCGGAGGAGCGCCAAATCCAATGAC | + |
|
Preference number: 5 (lower is better) Translates to: SPAHAEALAAAATAL*QGVLCLRRSAKSND Trigger: GTCATTGGATTTGGCGCTCCTCCGAAGGCACAAAACTCCTTGTCATAGCGCAGTGGCAGCAGCGGCAAGTGCCTCCGCATGTGCCGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000461990.1 ENST00000484933.6 ENST00000590653.5 |
||
| CDS CCA 90 bp | CCAATCCCAGGGGCTGGTGAGGTCTCTAGAGCTCCTTACCATCTGTaGGTGACACTGGACCAGGATTGGGAACAGGGTGCAAGCGTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PIPGAGEVSRAPYHL*VTLDQDWEQGASVA Trigger: GGCCACGCTTGCACCCTGTTCCCAATCCTGGTCCAGTGTCACCCACAGATGGTAAGGAGCTCTAGAGACCTCACCAGCCCCTGGGATTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000461990.1 ENST00000467438.1 ENST00000471417.5 ENST00000476432.5 ENST00000484933.6 ENST00000589455.5 ENST00000590653.5 |
||
| CDS TCA 90 bp | GGAGCCGCGACCCCACACCCTTGTAATGATGCCGCTCCAAGCAAATaGGTCCTTAATAACAACAGGGTGCTGGGGGCAGCGACCGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: GAATPHPCNDAAPSK*VLNNNRVLGAATDG Trigger: CCCATCGGTCGCTGCCCCCAGCACCCTGTTGTTATTAAGGACTCATTTGCTTGGAGCGGCATCATTACAAGGGTGTGGGGTCGCGGCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000590653.5 |
||
| CDS GCA 90 bp | GAGCCCAGTCATCTCGGGCTCACTGTCACAGACAGTCCTTACGGCTaGAGTGGAGTTCACAGTCCGAGCTGGAAGAAGGGTCTGCTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: EPSHLGLTVTDSPYG*SGVHSPSWKKGLLA Trigger: GGCAAGCAGACCCTTCTTCCAGCTCGGACTGTGAACTCCACTGCAGCCGTAAGGACTGTCTGTGACAGTGAGCCCGAGATGACTGGGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000461990.1 ENST00000467438.1 ENST00000471417.5 ENST00000484933.6 ENST00000590653.5 |
||
| CDS TCA 90 bp | GCGTGCTTTCGGCACGAAGGAGGAAGAAGAGGAACGCGCAGGGCTTaGTTCCCGGTTCTCCAGAATTCGGAAGTGGAAGAAGCCTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ACFRHEGGRRGTRRA*FPVLQNSEVEEAWE Trigger: CTCCCAGGCTTCTTCCACTTCCGAATTCTGGAGAACCGGGAATCAAGCCCTGCGCGTTCCTCTTCTTCCTCCTTCGTGCCGAAAGCACGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000467438.1 ENST00000484933.6 ENST00000590653.5 ENST00000619924.1 |
||
| CDS GCA 90 bp | GAAAGCAGCCCCGCTGGGAGGTCCACGGAGCAGTTCGCCGAGCTGTaGACAGGCCCTTTATTTTCCATCTGTCAAGAAAGGAAGCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: ESSPAGRSTEQFAEL*TGPLFSICQERKLP Trigger: AGGCAGCTTCCTTTCTTGACAGATGGAAAATAAAGGGCCTGTGCACAGCTCGGCGAACTGCTCCGTGGACCTCCCAGCGGGGCTGCTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000469312.6 ENST00000490006.6 |
||
| CDS CCA 90 bp | ATGATGCCGCTCCAAGCAAATGAGTCCTTAATAACAACAGGGTGCTaGGGGCAGCGACCGATGGGGAGCAAACAGCCTGGCCCTGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: MMPLQANESLITTGC*GQRPMGSKQPGPVV Trigger: CACCACAGGGCCAGGCTGTTTGCTCCCCATCGGTCGCTGCCCCCAGCACCCTGTTGTTATTAAGGACTCATTTGCTTGGAGCGGCATCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000467438.1 ENST00000476432.5 ENST00000484933.6 ENST00000587165.1 ENST00000589455.5 ENST00000590653.5 ENST00000619924.1 |
||
| CDS CCA 90 bp | GAGGAACGCGCAGGGCTTGATTCCCGGTTCTCCAGAATTCGGAAGTaGAAGAAGCCTGGGAGTGACAAGGGACCCCAGATCCGGCCTAAA | + |
|
Preference number: 5 (lower is better) Translates to: EERAGLDSRFSRIRK*KKPGSDKGPQIRPK Trigger: TTTAGGCCGGATCTGGGGTCCCTTGTCACTCCCAGGCTTCTTCCACTTCCGAATTCTGGAGAACCGGGAATCAAGCCCTGCGCGTTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000467438.1 ENST00000484933.6 ENST00000590653.5 ENST00000619924.1 |
||
| CDS TCA 90 bp | AGCCAAGGAGCCCCACACCCTTGTAATGATGCCGCTCCAAGCAAATaGGTCCTTAATAACAACAGGGTGCTGGGGGCAGCGACCGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: SQGAPHPCNDAAPSK*VLNNNRVLGAATDG Trigger: CCCATCGGTCGCTGCCCCCAGCACCCTGTTGTTATTAAGGACTCATTTGCTTGGAGCGGCATCATTACAAGGGTGTGGGGCTCCTTGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000484933.6 |
||
| CDS GCA 90 bp | GTGAGAAAGAAAGAGAGGAAGCCTAACCAACTGCTCACATCTCAGTaGAAAGCGGCTGCCAGCATACCCGGACAGCCCGGCACATGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: VRKKERKPNQLLTSQ*KAAASIPGQPGTCG Trigger: TCCGCATGTGCCGGGCTGTCCGGGTATGCTGGCAGCCGCTTTGCACTGAGATGTGAGCAGTTGGTTAGGCTTCCTCTCTTTCTTTCTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000461990.1 ENST00000484933.6 ENST00000590653.5 |
||
| CDS GCA 90 bp | GTAATGATGCCGCTCCAAGCAAATGAGTCCTTAATAACAACAGGGTaGTGGGGGCAGCGACCGATGGGGAGCAAACAGCCTGGCCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: VMMPLQANESLITTG*WGQRPMGSKQPGPV Trigger: CACAGGGCCAGGCTGTTTGCTCCCCATCGGTCGCTGCCCCCAGCACCCTGTTGTTATTAAGGACTCATTTGCTTGGAGCGGCATCATTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000467438.1 ENST00000476432.5 ENST00000484933.6 ENST00000587165.1 ENST00000589455.5 ENST00000590653.5 ENST00000619924.1 |
||
| CDS GCA 90 bp | AGGGGCCTGTGTAAGAGTCCCATCGTACCAACAAGGAAACTGACCTaGCCCAGTGTTACACCGTTTATCCCCAGCGGCACAGCCACATCC | + |
|
Preference number: 5 (lower is better) Translates to: RGLCKSPIVPTRKLT*PSVTPFIPSGTATS Trigger: GGATGTGGCTGTGCCGCTGGGGATAAACGGTGTAACACTGGGGCAGGTCAGTTTCCTTGTTGGTACGATGGGACTCTTACACAGGCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000467438.1 |
||
| CDS CCA 90 bp | CCAGGATTGGGAACAGGGTGCAAGCGTGGCCAGAGTTTCTCCTTTTaGTGTCCCAGTTCCTCGTCTACAGTGACCTGCCAACCCCGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: PGLGTGCKRGQSFSF*CPSSSSTVTCQPRD Trigger: ATCACGGGGTTGGCAGGTCACTGTAGACGAGGAACTGGGACACCAAAAGGAGAAACTCTGGCCACGCTTGCACCCTGTTCCCAATCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000461990.1 |
||
| CDS CCA 90 bp | CAGTCATCTCGGGCTCACTGTCACAGACAGTCCTTACGGCTGCAGTaGAGTTCACAGTCCGAGCTGGAAGAAGGGTCTGCTTGCCCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: QSSRAHCHRQSLRLQ*SSQSELEEGSACPQ Trigger: TTGAGGGCAAGCAGACCCTTCTTCCAGCTCGGACTGTGAACTCCACTGCAGCCGTAAGGACTGTCTGTGACAGTGAGCCCGAGATGACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000461990.1 ENST00000467438.1 ENST00000471417.5 ENST00000484933.6 ENST00000590653.5 |
||
| CDS TCA 90 bp | CGACGGGGGCAAGTCTCTAAAGGGGATATGGGTTACAGAGAAATTTaGTTGGACATGCTGGCTTCAGGTGTGCAGGTGGAGGCTGGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RRGQVSKGDMGYREI*LDMLASGVQVEAGR Trigger: CCGGCCAGCCTCCACCTGCACACCTGAAGCCAGCATGTCCAATCAAATTTCTCTGTAACCCATATCCCCTTTAGAGACTTGCCCCCGTCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000461990.1 ENST00000484933.6 ENST00000590653.5 |
||
| CDS TCA 90 bp | CTCCTTGTTCTCCGCTCACTTTCAGAACTGATGCCCTGGCAGACATaGAGCGTGCTTTCGGCACGAAGGAGGAAGAAGAGGAACGCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LLVLRSLSELMPWQT*SVLSARRRKKRNAQ Trigger: CTGCGCGTTCCTCTTCTTCCTCCTTCGTGCCGAAAGCACGCTTCATGTCTGCCAGGGCATCAGTTCTGAAAGTGAGCGGAGAACAAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000467438.1 ENST00000484933.6 ENST00000619924.1 |
||
| CDS GCA 90 bp | TCCTTACCATCTGTGGGTGACACTGGACCAGGATTGGGAACAGGGTaGAAGCGTGGCCAGAGTTTCTCCTTTTGGTGTCCCAGTTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SLPSVGDTGPGLGTG*KRGQSFSFWCPSSS Trigger: CGAGGAACTGGGACACCAAAAGGAGAAACTCTGGCCACGCTTGCACCCTGTTCCCAATCCTGGTCCAGTGTCACCCACAGATGGTAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000461990.1 ENST00000467438.1 ENST00000471417.5 ENST00000476432.5 ENST00000484933.6 ENST00000589455.5 ENST00000590653.5 |
||
| CDS GCA 90 bp | CGGCTGCAGTGGAGTTCACAGTCCGAGCTGGAAGAAGGGTCTGCTTaGCCTCAAAGGATCCCAGCAGGAATCTCTGTCCATAGAAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: RLQWSSQSELEEGSA*PQRIPAGISVHRRV Trigger: CACTCTTCTATGGACAGAGATTCCTGCTGGGATCCTTTGAGGGCAAGCAGACCCTTCTTCCAGCTCGGACTGTGAACTCCACTGCAGCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000461990.1 ENST00000467438.1 ENST00000471417.5 ENST00000484933.6 ENST00000590653.5 |
||
| CDS CCA 90 bp | GTCACAGACAGTCCTTACGGCTGCAGTGGAGTTCACAGTCCGAGCTaGAAGAAGGGTCTGCTTGCCCTCAAAGGATCCCAGCAGGAATCT | + |
|
Preference number: 5 (lower is better) Translates to: VTDSPYGCSGVHSPS*KKGLLALKGSQQES Trigger: AGATTCCTGCTGGGATCCTTTGAGGGCAAGCAGACCCTTCTTCCAGCTCGGACTGTGAACTCCACTGCAGCCGTAAGGACTGTCTGTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000461990.1 ENST00000467438.1 ENST00000471417.5 ENST00000484933.6 ENST00000590653.5 |
||
| CDS TCA 90 bp | CTTGCCCTCAAAGGATCCCAGCAGGAATCTCTGTCCATAGAAGAGTaGGGTGACCAATCCCAGGGGCTGGTGAGGTCTCTAGAGCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LALKGSQQESLSIEE*GDQSQGLVRSLELL Trigger: AAGGAGCTCTAGAGACCTCACCAGCCCCTGGGATTGGTCACCTCACTCTTCTATGGACAGAGATTCCTGCTGGGATCCTTTGAGGGCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000461990.1 ENST00000467438.1 ENST00000471417.5 ENST00000484933.6 ENST00000589455.5 ENST00000590653.5 |
||
| CDS TCA 90 bp | AGTATCTGGTGCCCACACCCTTGTAATGATGCCGCTCCAAGCAAATaGGTCCTTAATAACAACAGGGTGCTGGGGGCAGCGACCGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: SIWCPHPCNDAAPSK*VLNNNRVLGAATDG Trigger: CCCATCGGTCGCTGCCCCCAGCACCCTGTTGTTATTAAGGACTCATTTGCTTGGAGCGGCATCATTACAAGGGTGTGGGCACCAGATACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000587165.1 ENST00000589455.5 |
||
| CDS TCA 90 bp | GGTGTAGCAGTATCTGGTGTTTCAGAACTGATGCCCTGGCAGACATaGAGCGTGCTTTCGGCACGAAGGAGGAAGAAGAGGAACGCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GVAVSGVSELMPWQT*SVLSARRRKKRNAQ Trigger: CTGCGCGTTCCTCTTCTTCCTCCTTCGTGCCGAAAGCACGCTTCATGTCTGCCAGGGCATCAGTTCTGAAACACCAGATACTGCTACACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590653.5 |
||
| CDS GCA 90 bp | GCAAACACTTTGCCACAACATTTCCCGGCCCAAGTATCTCAACCCTaGTGGGAAGGGAAAGGCTATCCCAAGAGCAGAGCAGAGGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ANTLPQHFPAQVSQP*WEGKGYPKSRAEVR Trigger: CCTGACCTCTGCTCTGCTCTTGGGATAGCCTTTCCCTTCCCAGCAGGGTTGAGATACTTGGGCCGGGAAATGTTGTGGCAAAGTGTTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000461990.1 ENST00000484933.6 ENST00000590653.5 |
||
| CDS CCA 90 bp | GTATCAGTCACATTCATGGTGCTAATAAAAGAGCTCAGTTCTCTGTaGCAGGCCAAGGATTGGAGGGCCGGGAGGGAGCACAGAGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VSVTFMVLIKELSSL*QAKDWRAGREHRAQ Trigger: CTGGGCTCTGTGCTCCCTCCCGGCCCTCCAATCCTTGGCCTGCCACAGAGAACTGAGCTCTTTTATTAGCACCATGAATGTGACTGATAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000461990.1 ENST00000467438.1 ENST00000471417.5 ENST00000484933.6 ENST00000590653.5 |
||
| CDS TCA 90 bp | CCTCAAAGGATCCCAGCAGGAATCTCTGTCCATAGAAGAGTGAGGTaGCCAATCCCAGGGGCTGGTGAGGTCTCTAGAGCTCCTTACCAT | + |
|
Preference number: 5 (lower is better) Translates to: PQRIPAGISVHRRVR*PIPGAGEVSRAPYH Trigger: ATGGTAAGGAGCTCTAGAGACCTCACCAGCCCCTGGGATTGGTCACCTCACTCTTCTATGGACAGAGATTCCTGCTGGGATCCTTTGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000461990.1 ENST00000467438.1 ENST00000471417.5 ENST00000484933.6 ENST00000589455.5 ENST00000590653.5 |
||
| CDS GCA 90 bp | TCAGGCTTTTGGGTTTGGAATGGAACTGCACCACCAGCTTTCTTGTaGCTCCAGCTTGCAGACAGCAGATTGCGGGACTTCTCAGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SGFWVWNGTAPPAFL*LQLADSRLRDFSAS Trigger: TGAGGCTGAGAAGTCCCGCAATCTGCTGTCTGCAAGCTGGAGGCACAAGAAAGCTGGTGGTGCAGTTCCATTCCAAACCCAAAAGCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469312.6 |
||
| CDS CCA 90 bp | ATTGCAGAGTCATTGAGAGATCACCAACACCAGCCTCTCCCAGAGTaGAGGGGTGGCCTCTACTCTGAATCTAGCAACAGAAAGGGGACC | + |
|
Preference number: 5 (lower is better) Translates to: IAESLRDHQHQPLPE*RGGLYSESSNRKGT Trigger: GGTCCCCTTTCTGTTGCTAGATTCAGAGTAGAGGCCACCCCTCCACTCTGGGAGAGGCTGGTGTTGGTGATCTCTCAATGACTCTGCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000461990.1 ENST00000484933.6 ENST00000590653.5 |
||
| CDS CCA 90 bp | AACACTTTGCCACAACATTTCCCGGCCCAAGTATCTCAACCCTGCTaGGAAGGGAAAGGCTATCCCAAGAGCAGAGCAGAGGTCAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: NTLPQHFPAQVSQPC*EGKGYPKSRAEVRI Trigger: GATCCTGACCTCTGCTCTGCTCTTGGGATAGCCTTTCCCTTCCCAGCAGGGTTGAGATACTTGGGCCGGGAAATGTTGTGGCAAAGTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000461990.1 ENST00000484933.6 ENST00000590653.5 |
||
| CDS TCA 90 bp | ATATGTAGTACCCCACACCCTTGTAATGATGCCGCTCCAAGCAAATaGGTCCTTAATAACAACAGGGTGCTGGGGGCAGCGACCGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: ICSTPHPCNDAAPSK*VLNNNRVLGAATDG Trigger: CCCATCGGTCGCTGCCCCCAGCACCCTGTTGTTATTAAGGACTCATTTGCTTGGAGCGGCATCATTACAAGGGTGTGGGGTACTACATAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000467438.1 ENST00000619924.1 |
||
| CDS TCA 90 bp | TGGGGAAGAAAAAGAAACTCCTTGTTCTCCGCTCACTTTCAGAACTaGTGCCCTGGCAGACATGAAGCGTGCTTTCGGCACGAAGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: WGRKRNSLFSAHFQN*CPGRHEACFRHEGG Trigger: TCCTCCTTCGTGCCGAAAGCACGCTTCATGTCTGCCAGGGCATCAGTTCTGAAAGTGAGCGGAGAACAAGGAGTTTCTTTTTCTTCCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000467438.1 ENST00000484933.6 ENST00000619924.1 |
||
| CDS TCA 90 bp | AGACAGCCAGCTCAAGAAACAAAAGCCCCAAGTCTGTGTCTCTCCTaGGCTTTGGCAAACACTTTGCCACAACATTTCCCGGCCCAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: RQPAQETKAPSLCLS*ALANTLPQHFPAQV Trigger: TACTTGGGCCGGGAAATGTTGTGGCAAAGTGTTTGCCAAAGCTCAGGAGAGACACAGACTTGGGGCTTTTGTTTCTTGAGCTGGCTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000461990.1 ENST00000484933.6 ENST00000590653.5 |
||
| CDS CCA 90 bp | CTTCCCAGTCTCACACTCCCAGGAGTAGCAACATGTATCAAGCCCTaGCGCAGACATAGTCCTTACAAAAGGCAACTTCTGGGGAAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LPSLTLPGVATCIKP*RRHSPYKRQLLGKK Trigger: TTTCTTCCCCAGAAGTTGCCTTTTGTAAGGACTATGTCTGCGCCAGGGCTTGATACATGTTGCTACTCCTGGGAGTGTGAGACTGGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000467438.1 ENST00000619924.1 |
||
| CDS CCA 90 bp | CCAGGATTGGGAACAGGGTGCAAGCGTGGCCAGAGTTTCTCCTTTTaGTGTCCCAGTTCCTCGTCTACAGTGACAATGAGAATCTTTACA | + |
|
Preference number: 5 (lower is better) Translates to: PGLGTGCKRGQSFSF*CPSSSSTVTMRIFT Trigger: TGTAAAGATTCTCATTGTCACTGTAGACGAGGAACTGGGACACCAAAAGGAGAAACTCTGGCCACGCTTGCACCCTGTTCCCAATCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000467438.1 ENST00000471417.5 ENST00000476432.5 ENST00000484933.6 ENST00000589455.5 ENST00000590653.5 |
||
| CDS TCA 90 bp | AAAAGCGATGAGATGGACTTGCTGCCACATATAGGTCCATGCCGATaGGATGGTGTAGCAGTATCTGGTGCTCCATCCTCCAACTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: KSDEMDLLPHIGPCR*DGVAVSGAPSSNSF Trigger: AAAGGAGTTGGAGGATGGAGCACCAGATACTGCTACACCATCTCATCGGCATGGACCTATATGTGGCAGCAAGTCCATCTCATCGCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000461990.1 ENST00000469312.6 ENST00000471417.5 ENST00000490006.6 |
||
| CDS TCA 90 bp | AAAAGCGATGAGATGGACTTGCTGCCACATATAGGTCCATGCCGATaGGATGGTGTAGCAGTATCTGGTGCCCACACCCTTGTAATGATG | + |
|
Preference number: 5 (lower is better) Translates to: KSDEMDLLPHIGPCR*DGVAVSGAHTLVMM Trigger: CATCATTACAAGGGTGTGGGCACCAGATACTGCTACACCATCTCATCGGCATGGACCTATATGTGGCAGCAAGTCCATCTCATCGCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000587165.1 ENST00000589455.5 |
||
| CDS TCA 90 bp | AAAAGCGATGAGATGGACTTGCTGCCACATATAGGTCCATGCCGATaGGATGGTGTAGCAGTATCTGGTGTTTCAGAACTGATGCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KSDEMDLLPHIGPCR*DGVAVSGVSELMPW Trigger: CCAGGGCATCAGTTCTGAAACACCAGATACTGCTACACCATCTCATCGGCATGGACCTATATGTGGCAGCAAGTCCATCTCATCGCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590653.5 |
||
| CDS CCA 90 bp | CAGCTCAAGAAACAAAAGCCCCAAGTCTGTGTCTCTCCTGAGCTTTaGCAAACACTTTGCCACAACATTTCCCGGCCCAAGTATCTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: QLKKQKPQVCVSPEL*QTLCHNISRPKYLN Trigger: GTTGAGATACTTGGGCCGGGAAATGTTGTGGCAAAGTGTTTGCCAAAGCTCAGGAGAGACACAGACTTGGGGCTTTTGTTTCTTGAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000461990.1 ENST00000484933.6 ENST00000590653.5 |
||
| CDS CCA 90 bp | ATTTCCAGCCTGGTATACGACGGGGGCAAGTCTCTAAAGGGGATATaGGTTACAGAGAAATTTGATTGGACATGCTGGCTTCAGGTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: ISSLVYDGGKSLKGI*VTEKFDWTCWLQVC Trigger: GCACACCTGAAGCCAGCATGTCCAATCAAATTTCTCTGTAACCCATATCCCCTTTAGAGACTTGCCCCCGTCGTATACCAGGCTGGAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000461990.1 ENST00000484933.6 ENST00000590653.5 |
||
| CDS CCA 90 bp | CTGACTTCGGCAGTATTGGAACAGAGTCATCCCAGACATGCTACTTaGCTCAGAGATGAAGAAATGTACTGTATTTGGGGACAGGTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: LTSAVLEQSHPRHAT*LRDEEMYCIWGQVY Trigger: ATAGACCTGTCCCCAAATACAGTACATTTCTTCATCTCTGAGCCAAGTAGCATGTCTGGGATGACTCTGTTCCAATACTGCCGAAGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469312.6 |
||
| CDS TCA 90 bp | GACAAGCACCATCCAACCACCCCGAGCGATGGAGTAACTTGCATTTaGAATAGTTGGTGCAGAAATAACCACTCTCCTTTTGTTTGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: DKHHPTTPSDGVTCI*NSWCRNNHSPFVCL Trigger: CAAACAAACAAAAGGAGAGTGGTTATTTCTGCACCAACTATTTCAAATGCAAGTTACTCCATCGCTCGGGGTGGTTGGATGGTGCTTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000461990.1 ENST00000484933.6 ENST00000590653.5 |
||
| CDS GCA 90 bp | AGTTTGAAATGTAAATGGAAGGGCTGCTTTTGCAGGTCATCATACTaGAGAAAGTCCATTCCTGGAACACTTTCCAAGGCATCATTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLKCKWKGCFCRSSY*RKSIPGTLSKASLA Trigger: AGCCAATGATGCCTTGGAAAGTGTTCCAGGAATGGACTTTCTGCAGTATGATGACCTGCAAAAGCAGCCCTTCCATTTACATTTCAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000469312.6 |
||
| CDS CCA 90 bp | CCCAGACATGCTACTTGGCTCAGAGATGAAGAAATGTACTGTATTTaGGGACAGGTCTATACTGCACCTGGATTCCTATATTTGCTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: PRHATWLRDEEMYCI*GQVYTAPGFLYLLV Trigger: TACTAGCAAATATAGGAATCCAGGTGCAGTATAGACCTGTCCCCAAATACAGTACATTTCTTCATCTCTGAGCCAAGTAGCATGTCTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469312.6 |
||
| CDS GCA 90 bp | AGTTTGAAATGTAAATGGAAGGGCTGCTTTTGCAGGTCATCATACTaGAGAAAGTCCATTCCTGGAACACTTTCCAAGGCAATGAGAATC | + |
|
Preference number: 5 (lower is better) Translates to: SLKCKWKGCFCRSSY*RKSIPGTLSKAMRI Trigger: GATTCTCATTGCCTTGGAAAGTGTTCCAGGAATGGACTTTCTGCAGTATGATGACCTGCAAAAGCAGCCCTTCCATTTACATTTCAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490006.6 |
||
| CDS TCA 90 bp | GCTGGACTTGACCCTGGTTTCTTATCTAAGTGGGTAATAAGAAGATaGTGCTGTTGTGAGAGTTTAAGTGTAGCTCCTGGGTGTATTTTT | + |
|
Preference number: 5 (lower is better) Translates to: AGLDPGFLSKWVIRR*CCCESLSVAPGCIF Trigger: AAAAATACACCCAGGAGCTACACTTAAACTCTCACAACAGCATCATCTTCTTATTACCCACTTAGATAAGAAACCAGGGTCAAGTCCAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469312.6 |
||
| CDS GCA 90 bp | ATGTTTGAATTAATAAGGGCGCACTTTAATGCACTAATGGGGAATTaGATTAGCTGGCTTTGCAGACATAACTTTGAAAATCTCCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: MFELIRAHFNALMGN*ISWLCRHNFENLPG Trigger: ACCAGGGAGATTTTCAAAGTTATGTCTGCAAAGCCAGCTAATGCAATTCCCCATTAGTGCATTAAAGTGCGCCCTTATTAATTCAAACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000461990.1 ENST00000484933.6 ENST00000590653.5 |
||
| CDS CCA 72 bp | CCGGCGAGGAGCCGGGCTTCTGACGGGAGGGCAGGGTaGCGAGAGGGCGCCAGCAGGACGCCTGACCTTGCG | + |
|
Preference number: 6 (lower is better) Translates to: PARSRASDGRAG*REGASRTPDLA Trigger: CGCAAGGTCAGGCGTCCTGCTGGCGCCCTCTCGCCACCCTGCCCTCCCGTCAGAAGCCCGGCTCCTCGCCGG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000467438.1 ENST00000476432.5 ENST00000484933.6 ENST00000590653.5 ENST00000619924.1 |
||
| CDS GCA 72 bp | AAAGCGGCTGCCAGCATACCCGGACAGCCCGGCACATaGGGAGGCACTTGCCGCTGCTGCCACTGCGCTATG | + |
|
Preference number: 6 (lower is better) Translates to: KAAASIPGQPGT*GGTCRCCHCAM Trigger: CATAGCGCAGTGGCAGCAGCGGCAAGTGCCTCCGCATGTGCCGGGCTGTCCGGGTATGCTGGCAGCCGCTTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000461990.1 ENST00000484933.6 ENST00000590653.5 |
||
| CDS CAA 72 bp | GAGAGGACGACCATCGACTGGGAAGCGGAAACCCCCTaGCGGTTTGAGGGCCCTGAGGAGGGGAAGCGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: ERTTIDWEAETP*RFEGPEEGKRP Trigger: GGGGCGCTTCCCCTCCTCAGGGCCCTCAAACCGCAAGGGGGTTTCCGCTTCCCAGTCGATGGTCGTCCTCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000467438.1 ENST00000619924.1 |
||
| CDS GCA 72 bp | GAGCAGAGCAGAGGTCAGGATCCGCCTCTCCGAGGCTaGTGGCTCCTGAAACTGGGGCAGGGCTCTGTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: EQSRGQDPPLRG*WLLKLGQGSVQ Trigger: CTGCACAGAGCCCTGCCCCAGTTTCAGGAGCCAGCAGCCTCGGAGAGGCGGATCCTGACCTCTGCTCTGCTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000461990.1 ENST00000484933.6 ENST00000590653.5 |
||
| CDS CCA 72 bp | AGAACTCGCGGCAATGGAGACTCCCGACACTCCATGTaGCACAAGTCCCAGGTCCCGGCGGGCCAGCATCCG | + |
|
Preference number: 6 (lower is better) Translates to: RTRGNGDSRHSM*HKSQVPAGQHP Trigger: CGGATGCTGGCCCGCCGGGACCTGGGACTTGTGCCACATGGAGTGTCGGGAGTCTCCATTGCCGCGAGTTCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000467438.1 ENST00000476432.5 ENST00000484933.6 ENST00000587165.1 ENST00000589455.5 ENST00000590653.5 ENST00000619924.1 |
||
| CDS CCA 72 bp | GAGCGAGGAGACCATCACCTCAGAAAGCAGCCCCGCTaGGAGGTCCACGGAGCAGTTCGCCGAGCTGTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: ERGDHHLRKQPR*EVHGAVRRAVH Trigger: GTGCACAGCTCGGCGAACTGCTCCGTGGACCTCCCAGCGGGGCTGCTTTCTGAGGTGATGGTCTCCTCGCTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000469312.6 ENST00000471417.5 ENST00000490006.6 |
||
| CDS CAA 90 bp | ACGGGAGGGCAGGGTGGCGAGAGGGCGCCAGCAGGACGCCTGACCTaGCGTGAAAAACCAGAGAATTCCACAGCACCGTGGCGAGTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: TGGQGGERAPAGRLT*REKPENSTAPWRVL Trigger: GAGCACTCGCCACGGTGCTGTGGAATTCTCTGGTTTTTCACGCAAGGTCAGGCGTCCTGCTGGCGCCCTCTCGCCACCCTGCCCTCCCGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000590653.5 |
||
| CDS CCA 72 bp | GGCAGCGACCGATGGGGAGCAAACAGCCTGGCCCTGTaGTGTAGAACTCGCGGCAATGGAGACTCCCGACAC | + |
|
Preference number: 6 (lower is better) Translates to: GSDRWGANSLAL*CRTRGNGDSRH Trigger: GTGTCGGGAGTCTCCATTGCCGCGAGTTCTACACCACAGGGCCAGGCTGTTTGCTCCCCATCGGTCGCTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000467438.1 ENST00000476432.5 ENST00000484933.6 ENST00000587165.1 ENST00000589455.5 ENST00000590653.5 ENST00000619924.1 |
||
| CDS CCA 72 bp | GTGCTGGGGGCAGCGACCGATGGGGAGCAAACAGCCTaGCCCTGTGGTGTAGAACTCGCGGCAATGGAGACT | + |
|
Preference number: 6 (lower is better) Translates to: VLGAATDGEQTA*PCGVELAAMET Trigger: AGTCTCCATTGCCGCGAGTTCTACACCACAGGGCCAGGCTGTTTGCTCCCCATCGGTCGCTGCCCCCAGCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000467438.1 ENST00000476432.5 ENST00000484933.6 ENST00000587165.1 ENST00000589455.5 ENST00000590653.5 ENST00000619924.1 |
||
| CDS CAA 90 bp | AGCGGCTGCCAGCATACCCGGACAGCCCGGCACATGCGGAGGCACTaGCCGCTGCTGCCACTGCGCTATGACAAGGAGTTTTGTGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SGCQHTRTARHMRRH*PLLPLRYDKEFCAF Trigger: GAAGGCACAAAACTCCTTGTCATAGCGCAGTGGCAGCAGCGGCAAGTGCCTCCGCATGTGCCGGGCTGTCCGGGTATGCTGGCAGCCGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000461990.1 ENST00000484933.6 ENST00000590653.5 |
||
| CDS TCA 72 bp | GAGGGCAGGGTGGCGAGAGGGCGCCAGCAGGACGCCTaGCCTTGCGTGAAAAACCAGAGAATTCCACAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: EGRVARGRQQDA*PCVKNQRIPQH Trigger: GTGCTGTGGAATTCTCTGGTTTTTCACGCAAGGTCAGGCGTCCTGCTGGCGCCCTCTCGCCACCCTGCCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000467438.1 ENST00000476432.5 ENST00000590653.5 |
||
| CDS CAA 72 bp | CAGCATACCCGGACAGCCCGGCACATGCGGAGGCACTaGCCGCTGCTGCCACTGCGCTATGACAAGGAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: QHTRTARHMRRH*PLLPLRYDKEF Trigger: AAACTCCTTGTCATAGCGCAGTGGCAGCAGCGGCAAGTGCCTCCGCATGTGCCGGGCTGTCCGGGTATGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000461990.1 ENST00000484933.6 ENST00000590653.5 |
||
| CDS CAA 72 bp | CAGGGTGGCGAGAGGGCGCCAGCAGGACGCCTGACCTaGCGTGAAAAACCAGAGAATTCCACAGCACCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: QGGERAPAGRLT*REKPENSTAPW Trigger: CCACGGTGCTGTGGAATTCTCTGGTTTTTCACGCAAGGTCAGGCGTCCTGCTGGCGCCCTCTCGCCACCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000476432.5 ENST00000590653.5 |
||
| CDS TCA 72 bp | TGGCGAGAGGGCGCCAGCAGGACGCCTGACCTTGCGTaGAAAACCAGAGAATTCCACAGCACCGTGGCGAGT | + |
|
Preference number: 6 (lower is better) Translates to: WREGASRTPDLA*KTREFHSTVAS Trigger: ACTCGCCACGGTGCTGTGGAATTCTCTGGTTTTTCACGCAAGGTCAGGCGTCCTGCTGGCGCCCTCTCGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590653.5 |
||
| CDS GCA 72 bp | AGCATACCCGGACAGCCCGGCACATGCGGAGGCACTTaGCGCTGCTGCCACTGCGCTATGACAAGGAGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: SIPGQPGTCGGT*RCCHCAMTRSF Trigger: AAAACTCCTTGTCATAGCGCAGTGGCAGCAGCGGCAAGTGCCTCCGCATGTGCCGGGCTGTCCGGGTATGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000461990.1 ENST00000484933.6 ENST00000590653.5 |
||
| CDS TCA 72 bp | CATGCGGAGGCACTTGCCGCTGCTGCCACTGCGCTATaGCAAGGAGTTTTGTGCCTTCGGAGGAGCGCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: HAEALAAAATAL*QGVLCLRRSAK Trigger: TTTGGCGCTCCTCCGAAGGCACAAAACTCCTTGTCATAGCGCAGTGGCAGCAGCGGCAAGTGCCTCCGCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000461990.1 ENST00000484933.6 ENST00000590653.5 |
||
| CDS CCA 72 bp | AAATGGGCGACGGGTAAATGGAGATGCAGCCGGGGATaGGAGAGGACGACCATCGACTGGGAAGCGGAAACC | + |
|
Preference number: 6 (lower is better) Translates to: KWATGKWRCSRG*ERTTIDWEAET Trigger: GGTTTCCGCTTCCCAGTCGATGGTCGTCCTCTCCCATCCCCGGCTGCATCTCCATTTACCCGTCGCCCATTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000467438.1 ENST00000619924.1 |
||
| CDS CAA 90 bp | CATGGTGCTAATAAAAGAGCTCAGTTCTCTGTGGCAGGCCAAGGATaGGAGGGCCGGGAGGGAGCACAGAGCCCAGTCATCTCGGGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: HGANKRAQFSVAGQG*EGREGAQSPVISGS Trigger: TGAGCCCGAGATGACTGGGCTCTGTGCTCCCTCCCGGCCCTCCAATCCTTGGCCTGCCACAGAGAACTGAGCTCTTTTATTAGCACCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000461990.1 ENST00000467438.1 ENST00000471417.5 ENST00000484933.6 ENST00000590653.5 |
||
| CDS TCA 72 bp | AAACAGCAAAGGCAGGATTCAGACACCTCAAGGCAGTaGACAGGCGGCCCCTGGTTCTGGTCCTCCCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: KQQRQDSDTSRQ*TGGPWFWSSLS Trigger: GGAGAGGGAGGACCAGAACCAGGGGCCGCCTGTTCACTGCCTTGAGGTGTCTGAATCCTGCCTTTGCTGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467438.1 |
||
| CDS GCA 72 bp | CCCGCTGGGAGGTCCACGGAGCAGTTCGCCGAGCTGTaGACAGGCCCTTTATTTTCCATCTGTCAAGAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: PAGRSTEQFAEL*TGPLFSICQER Trigger: CCTTTCTTGACAGATGGAAAATAAAGGGCCTGTGCACAGCTCGGCGAACTGCTCCGTGGACCTCCCAGCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000469312.6 ENST00000490006.6 |
||
| CDS CCA 72 bp | GGGGCTGGTGAGGTCTCTAGAGCTCCTTACCATCTGTaGGTGACACTGGACCAGGATTGGGAACAGGGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: GAGEVSRAPYHL*VTLDQDWEQGA Trigger: TGCACCCTGTTCCCAATCCTGGTCCAGTGTCACCCACAGATGGTAAGGAGCTCTAGAGACCTCACCAGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000461990.1 ENST00000467438.1 ENST00000471417.5 ENST00000476432.5 ENST00000484933.6 ENST00000589455.5 ENST00000590653.5 |
||
| CDS CCA 72 bp | CGGGCTCACTGTCACAGACAGTCCTTACGGCTGCAGTaGAGTTCACAGTCCGAGCTGGAAGAAGGGTCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: RAHCHRQSLRLQ*SSQSELEEGSA Trigger: AGCAGACCCTTCTTCCAGCTCGGACTGTGAACTCCACTGCAGCCGTAAGGACTGTCTGTGACAGTGAGCCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000461990.1 ENST00000467438.1 ENST00000471417.5 ENST00000484933.6 ENST00000590653.5 |
||
| CDS CAA 90 bp | AGCGTGCTTTCGGCACGAAGGAGGAAGAAGAGGAACGCGCAGGGCTaGATTCCCGGTTCTCCAGAATTCGGAAGTGGAAGAAGCCTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: SVLSARRRKKRNAQG*IPGSPEFGSGRSLG Trigger: TCCCAGGCTTCTTCCACTTCCGAATTCTGGAGAACCGGGAATCAAGCCCTGCGCGTTCCTCTTCTTCCTCCTTCGTGCCGAAAGCACGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000467438.1 ENST00000484933.6 ENST00000590653.5 ENST00000619924.1 |
||
| CDS TCA 72 bp | CTGGTGAGGTCTCTAGAGCTCCTTACCATCTGTGGGTaGCACTGGACCAGGATTGGGAACAGGGTGCAAGCG | + |
|
Preference number: 6 (lower is better) Translates to: LVRSLELLTICG*HWTRIGNRVQA Trigger: CGCTTGCACCCTGTTCCCAATCCTGGTCCAGTGTCACCCACAGATGGTAAGGAGCTCTAGAGACCTCACCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000461990.1 ENST00000467438.1 ENST00000471417.5 ENST00000476432.5 ENST00000484933.6 ENST00000589455.5 ENST00000590653.5 |
||
| CDS GCA 72 bp | TCTGTGGGTGACACTGGACCAGGATTGGGAACAGGGTaGAAGCGTGGCCAGAGTTTCTCCTTTTGGTGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: SVGDTGPGLGTG*KRGQSFSFWCP Trigger: GGGACACCAAAAGGAGAAACTCTGGCCACGCTTGCACCCTGTTCCCAATCCTGGTCCAGTGTCACCCACAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000461990.1 ENST00000467438.1 ENST00000471417.5 ENST00000476432.5 ENST00000484933.6 ENST00000589455.5 ENST00000590653.5 |
||
| CDS GCA 72 bp | CATCTCGGGCTCACTGTCACAGACAGTCCTTACGGCTaGAGTGGAGTTCACAGTCCGAGCTGGAAGAAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: HLGLTVTDSPYG*SGVHSPSWKKG Trigger: ACCCTTCTTCCAGCTCGGACTGTGAACTCCACTGCAGCCGTAAGGACTGTCTGTGACAGTGAGCCCGAGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000461990.1 ENST00000467438.1 ENST00000471417.5 ENST00000484933.6 ENST00000590653.5 |
||
| CDS CCA 72 bp | AGTCCTTACGGCTGCAGTGGAGTTCACAGTCCGAGCTaGAAGAAGGGTCTGCTTGCCCTCAAAGGATCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SPYGCSGVHSPS*KKGLLALKGSQ Trigger: CTGGGATCCTTTGAGGGCAAGCAGACCCTTCTTCCAGCTCGGACTGTGAACTCCACTGCAGCCGTAAGGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000461990.1 ENST00000467438.1 ENST00000471417.5 ENST00000484933.6 ENST00000590653.5 |
||
| CDS CCA 72 bp | GCAGGGCTTGATTCCCGGTTCTCCAGAATTCGGAAGTaGAAGAAGCCTGGGAGTGACAAGGGACCCCAGATC | + |
|
Preference number: 6 (lower is better) Translates to: AGLDSRFSRIRK*KKPGSDKGPQI Trigger: GATCTGGGGTCCCTTGTCACTCCCAGGCTTCTTCCACTTCCGAATTCTGGAGAACCGGGAATCAAGCCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000467438.1 ENST00000484933.6 ENST00000590653.5 ENST00000619924.1 |
||
| CDS CAA 72 bp | GGGAACAGGGTGCAAGCGTGGCCAGAGTTTCTCCTTTaGGTGTCCCAGTTCCTCGTCTACAGTGACCTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GNRVQAWPEFLL*VSQFLVYSDLP Trigger: TGGCAGGTCACTGTAGACGAGGAACTGGGACACCAAAAGGAGAAACTCTGGCCACGCTTGCACCCTGTTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000461990.1 |
||
| CDS TCA 72 bp | CTCCGCTCACTTTCAGAACTGATGCCCTGGCAGACATaGAGCGTGCTTTCGGCACGAAGGAGGAAGAAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LRSLSELMPWQT*SVLSARRRKKR Trigger: CCTCTTCTTCCTCCTTCGTGCCGAAAGCACGCTTCATGTCTGCCAGGGCATCAGTTCTGAAAGTGAGCGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000467438.1 ENST00000484933.6 ENST00000619924.1 |
||
| CDS CCA 72 bp | CCACAACATTTCCCGGCCCAAGTATCTCAACCCTGCTaGGAAGGGAAAGGCTATCCCAAGAGCAGAGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: PQHFPAQVSQPC*EGKGYPKSRAE Trigger: CTCTGCTCTGCTCTTGGGATAGCCTTTCCCTTCCCAGCAGGGTTGAGATACTTGGGCCGGGAAATGTTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000461990.1 ENST00000484933.6 ENST00000590653.5 |
||
| CDS CAA 72 bp | GTGGAGTTCACAGTCCGAGCTGGAAGAAGGGTCTGCTaGCCCTCAAAGGATCCCAGCAGGAATCTCTGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: VEFTVRAGRRVC*PSKDPSRNLCP Trigger: TGGACAGAGATTCCTGCTGGGATCCTTTGAGGGCAAGCAGACCCTTCTTCCAGCTCGGACTGTGAACTCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000461990.1 ENST00000467438.1 ENST00000471417.5 ENST00000484933.6 ENST00000589455.5 ENST00000590653.5 |
||
| CDS TCA 72 bp | ATCCCAGCAGGAATCTCTGTCCATAGAAGAGTGAGGTaGCCAATCCCAGGGGCTGGTGAGGTCTCTAGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: IPAGISVHRRVR*PIPGAGEVSRA Trigger: AGCTCTAGAGACCTCACCAGCCCCTGGGATTGGTCACCTCACTCTTCTATGGACAGAGATTCCTGCTGGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000461990.1 ENST00000467438.1 ENST00000471417.5 ENST00000484933.6 ENST00000589455.5 ENST00000590653.5 |
||
| CDS TCA 72 bp | GGCTCTGTGCAGTTGGGACTTCCATTGCAGAGTCATTaGGAGATCACCAACACCAGCCTCTCCCAGAGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: GSVQLGLPLQSH*EITNTSLSQSG Trigger: TCCACTCTGGGAGAGGCTGGTGTTGGTGATCTCTCAATGACTCTGCAATGGAAGTCCCAACTGCACAGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000461990.1 ENST00000484933.6 ENST00000590653.5 |
||
| CDS TCA 72 bp | GCCTGTGTAAGAGTCCCATCGTACCAACAAGGAAACTaGCCTGCCCCAGTGTTACACCGTTTATCCCCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: ACVRVPSYQQGN*PAPVLHRLSPA Trigger: CGCTGGGGATAAACGGTGTAACACTGGGGCAGGTCAGTTTCCTTGTTGGTACGATGGGACTCTTACACAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000467438.1 |
||
| CDS GCA 72 bp | AACTGGGGCAGGGCTCTGTGCAGTTGGGACTTCCATTaGAGAGTCATTGAGAGATCACCAACACCAGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: NWGRALCSWDFH*RVIERSPTPAS Trigger: AGAGGCTGGTGTTGGTGATCTCTCAATGACTCTGCAATGGAAGTCCCAACTGCACAGAGCCCTGCCCCAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000461990.1 ENST00000484933.6 ENST00000590653.5 |
||
| CDS GCA 72 bp | TTGCCACAACATTTCCCGGCCCAAGTATCTCAACCCTaGTGGGAAGGGAAAGGCTATCCCAAGAGCAGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LPQHFPAQVSQP*WEGKGYPKSRA Trigger: TGCTCTGCTCTTGGGATAGCCTTTCCCTTCCCAGCAGGGTTGAGATACTTGGGCCGGGAAATGTTGTGGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000461990.1 ENST00000484933.6 ENST00000590653.5 |
||
| CDS GCA 72 bp | AAGGGGATATGGGTTACAGAGAAATTTGATTGGACATaGTGGCTTCAGGTGTGCAGGTGGAGGCTGGCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: KGIWVTEKFDWT*WLQVCRWRLAG Trigger: CCCGGCCAGCCTCCACCTGCACACCTGAAGCCAGCATGTCCAATCAAATTTCTCTGTAACCCATATCCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000461990.1 ENST00000484933.6 ENST00000590653.5 |
||
| CDS CAA 72 bp | GGGAACAGGGTGCAAGCGTGGCCAGAGTTTCTCCTTTaGGTGTCCCAGTTCCTCGTCTACAGTGACAATGAG | + |
|
Preference number: 6 (lower is better) Translates to: GNRVQAWPEFLL*VSQFLVYSDNE Trigger: CTCATTGTCACTGTAGACGAGGAACTGGGACACCAAAAGGAGAAACTCTGGCCACGCTTGCACCCTGTTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000467438.1 ENST00000471417.5 ENST00000476432.5 ENST00000484933.6 ENST00000589455.5 ENST00000590653.5 |
||
| CDS CAA 72 bp | ATGGAACTGCACCACCAGCTTTCTTGTGCCTCCAGCTaGCAGACAGCAGATTGCGGGACTTCTCAGCCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: MELHHQLSCASS*QTADCGTSQPH Trigger: ATGAGGCTGAGAAGTCCCGCAATCTGCTGTCTGCAAGCTGGAGGCACAAGAAAGCTGGTGGTGCAGTTCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469312.6 |
||
| CDS TCA 72 bp | GAGATGGACTTGCTGCCACATATAGGTCCATGCCGATaGGATGGTGTAGCAGTATCTGGTGCTCCATCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: EMDLLPHIGPCR*DGVAVSGAPSS Trigger: GGAGGATGGAGCACCAGATACTGCTACACCATCTCATCGGCATGGACCTATATGTGGCAGCAAGTCCATCTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000461990.1 ENST00000469312.6 ENST00000471417.5 ENST00000490006.6 |
||
| CDS TCA 72 bp | AAAGGATCCCAGCAGGAATCTCTGTCCATAGAAGAGTaGGGTGACCAATCCCAGGGGCTGGTGAGGTCTCTA | + |
|
Preference number: 6 (lower is better) Translates to: KGSQQESLSIEE*GDQSQGLVRSL Trigger: TAGAGACCTCACCAGCCCCTGGGATTGGTCACCTCACTCTTCTATGGACAGAGATTCCTGCTGGGATCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000461990.1 ENST00000467438.1 ENST00000471417.5 ENST00000484933.6 ENST00000589455.5 ENST00000590653.5 |
||
| CDS TCA 72 bp | GAGATGGACTTGCTGCCACATATAGGTCCATGCCGATaGGATGGTGTAGCAGTATCTGGTGCCCACACCCTT | + |
|
Preference number: 6 (lower is better) Translates to: EMDLLPHIGPCR*DGVAVSGAHTL Trigger: AAGGGTGTGGGCACCAGATACTGCTACACCATCTCATCGGCATGGACCTATATGTGGCAGCAAGTCCATCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000587165.1 ENST00000589455.5 |
||
| CDS TCA 72 bp | GTATCTGGTGTTTCAGAACTGATGCCCTGGCAGACATaGAGCGTGCTTTCGGCACGAAGGAGGAAGAAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: VSGVSELMPWQT*SVLSARRRKKR Trigger: CCTCTTCTTCCTCCTTCGTGCCGAAAGCACGCTTCATGTCTGCCAGGGCATCAGTTCTGAAACACCAGATAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590653.5 |
||
| CDS GCA 72 bp | TGTAAGAGTCCCATCGTACCAACAAGGAAACTGACCTaGCCCAGTGTTACACCGTTTATCCCCAGCGGCACA | + |
|
Preference number: 6 (lower is better) Translates to: CKSPIVPTRKLT*PSVTPFIPSGT Trigger: TGTGCCGCTGGGGATAAACGGTGTAACACTGGGGCAGGTCAGTTTCCTTGTTGGTACGATGGGACTCTTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467438.1 |
||
| CDS CCA 72 bp | GGACTTGCTGCCACATATAGGTCCATGCCGATGAGATaGTGTAGCAGTATCTGGTGCTCCATCCTCCAACTC | + |
|
Preference number: 6 (lower is better) Translates to: GLAATYRSMPMR*CSSIWCSILQL Trigger: GAGTTGGAGGATGGAGCACCAGATACTGCTACACCATCTCATCGGCATGGACCTATATGTGGCAGCAAGTCC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000461990.1 ENST00000469312.6 ENST00000471417.5 ENST00000490006.6 |
||
| CDS CCA 72 bp | TCATTGAGAGATCACCAACACCAGCCTCTCCCAGAGTaGAGGGGTGGCCTCTACTCTGAATCTAGCAACAGA | + |
|
Preference number: 6 (lower is better) Translates to: SLRDHQHQPLPE*RGGLYSESSNR Trigger: TCTGTTGCTAGATTCAGAGTAGAGGCCACCCCTCCACTCTGGGAGAGGCTGGTGTTGGTGATCTCTCAATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000461990.1 ENST00000484933.6 ENST00000590653.5 |
||
| CDS CCA 72 bp | GGACTTGCTGCCACATATAGGTCCATGCCGATGAGATaGTGTAGCAGTATCTGGTGCCTTGTAATGATGCCG | + |
|
Preference number: 6 (lower is better) Translates to: GLAATYRSMPMR*CSSIWCLVMMP Trigger: CGGCATCATTACAAGGCACCAGATACTGCTACACCATCTCATCGGCATGGACCTATATGTGGCAGCAAGTCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476432.5 |
||
| CDS CCA 72 bp | GGACTTGCTGCCACATATAGGTCCATGCCGATGAGATaGTGTAGCAGTATCTGGTGCCCACACCCTTGTAAT | + |
|
Preference number: 6 (lower is better) Translates to: GLAATYRSMPMR*CSSIWCPHPCN Trigger: ATTACAAGGGTGTGGGCACCAGATACTGCTACACCATCTCATCGGCATGGACCTATATGTGGCAGCAAGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000587165.1 ENST00000589455.5 |
||
| CDS CAA 72 bp | TCCAAGGCATCATTGGCTCCCCCGGTTTTCAGGCTTTaGGGTTTGGAATGGAACTGCACCACCAGCTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SKASLAPPVFRL*GLEWNCTTSFL Trigger: AAGAAAGCTGGTGGTGCAGTTCCATTCCAAACCCAAAAGCCTGAAAACCGGGGGAGCCAATGATGCCTTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000469312.6 |
||
| CDS CAA 90 bp | ACCAGGATTGGGAACAGGGTGCAAGCGTGGCCAGAGTTTCTCCTTTaGGTGTCCCAGTTCCTCGTCTACAGTGACAATGAGAATCTTTAC | + |
|
Preference number: 6 (lower is better) Translates to: TRIGNRVQAWPEFLL*VSQFLVYSDNENLY Trigger: GTAAAGATTCTCATTGTCACTGTAGACGAGGAACTGGGACACCAAAAGGAGAAACTCTGGCCACGCTTGCACCCTGTTCCCAATCCTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000467438.1 ENST00000471417.5 ENST00000476432.5 ENST00000484933.6 ENST00000589455.5 ENST00000590653.5 |
||
| CDS TCA 72 bp | AAAAGAAACTCCTTGTTCTCCGCTCACTTTCAGAACTaGTGCCCTGGCAGACATGAAGCGTGCTTTCGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: KRNSLFSAHFQN*CPGRHEACFRH Trigger: GTGCCGAAAGCACGCTTCATGTCTGCCAGGGCATCAGTTCTGAAAGTGAGCGGAGAACAAGGAGTTTCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000467438.1 ENST00000484933.6 ENST00000619924.1 |
||
| CDS TCA 72 bp | AGGAGTGGGAGAAGAAAGAATCCGCCTGAGTGGACCTaGCTCCATTCCATTCATGGCTCCCTATTTGTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: RSGRRKNPPEWT*LHSIHGSLFVP Trigger: TGGAACAAATAGGGAGCCATGAATGGAATGGAGTCAGGTCCACTCAGGCGGATTCTTTCTTCTCCCACTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490006.6 |
||
| CDS CCA 72 bp | CTCACACTCCCAGGAGTAGCAACATGTATCAAGCCCTaGCGCAGACATAGTCCTTACAAAAGGCAACTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LTLPGVATCIKP*RRHSPYKRQLL Trigger: CAGAAGTTGCCTTTTGTAAGGACTATGTCTGCGCCAGGGCTTGATACATGTTGCTACTCCTGGGAGTGTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000467438.1 ENST00000619924.1 |
||
| CDS CCA 72 bp | GGACTTGCTGCCACATATAGGTCCATGCCGATGAGATaGTGTAGCAGTATCTGGTGTTTCAGAACTGATGCC | + |
|
Preference number: 6 (lower is better) Translates to: GLAATYRSMPMR*CSSIWCFRTDA Trigger: GGCATCAGTTCTGAAACACCAGATACTGCTACACCATCTCATCGGCATGGACCTATATGTGGCAGCAAGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590653.5 |
||
| CDS TCA 72 bp | GCTCAAGAAACAAAAGCCCCAAGTCTGTGTCTCTCCTaGGCTTTGGCAAACACTTTGCCACAACATTTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: AQETKAPSLCLS*ALANTLPQHFP Trigger: CGGGAAATGTTGTGGCAAAGTGTTTGCCAAAGCTCAGGAGAGACACAGACTTGGGGCTTTTGTTTCTTGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000461990.1 ENST00000484933.6 ENST00000590653.5 |
||
| CDS TCA 72 bp | GAGATGGACTTGCTGCCACATATAGGTCCATGCCGATaGGATGGTGTAGCAGTATCTGGTGAAAAGGCAACT | + |
|
Preference number: 6 (lower is better) Translates to: EMDLLPHIGPCR*DGVAVSGEKAT Trigger: AGTTGCCTTTTCACCAGATACTGCTACACCATCTCATCGGCATGGACCTATATGTGGCAGCAAGTCCATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484933.6 |
||
| CDS TCA 72 bp | GAGATGGACTTGCTGCCACATATAGGTCCATGCCGATaGGATGGTGTAGCAGTATCTGGTGTTTCAGAACTG | + |
|
Preference number: 6 (lower is better) Translates to: EMDLLPHIGPCR*DGVAVSGVSEL Trigger: CAGTTCTGAAACACCAGATACTGCTACACCATCTCATCGGCATGGACCTATATGTGGCAGCAAGTCCATCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590653.5 |
||
| CDS CCA 72 bp | TCTCTAAAGGGGATATGGGTTACAGAGAAATTTGATTaGACATGCTGGCTTCAGGTGTGCAGGTGGAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SLKGIWVTEKFD*TCWLQVCRWRL Trigger: CAGCCTCCACCTGCACACCTGAAGCCAGCATGTCCAATCAAATTTCTCTGTAACCCATATCCCCTTTAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000461990.1 ENST00000484933.6 ENST00000590653.5 |
||
| CDS CAA 72 bp | GTTTGGGGCCAGAGTGTGCCCCACCTGGTGGTGCAATaGATTTCTGAATTAACCGGGCTTTATTTCAGTACA | + |
|
Preference number: 6 (lower is better) Translates to: VWGQSVPHLVVQ*ISELTGLYFST Trigger: TGTACTGAAATAAAGCCCGGTTAATTCAGAAATCAATTGCACCACCAGGTGGGGCACACTCTGGCCCCAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000469312.6 ENST00000490006.6 |
||
| CDS TCA 72 bp | CAAGTCTCTAAAGGGGATATGGGTTACAGAGAAATTTaGTTGGACATGCTGGCTTCAGGTGTGCAGGTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: QVSKGDMGYREI*LDMLASGVQVE Trigger: CTCCACCTGCACACCTGAAGCCAGCATGTCCAATCAAATTTCTCTGTAACCCATATCCCCTTTAGAGACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000461990.1 ENST00000484933.6 ENST00000590653.5 |
||
| CDS TCA 72 bp | ATCTTTACAAACTGGACTGACTTTCACCAAAAGCGATaGGATGGACTTGCTGCCACATATAGGTCCATGCCG | + |
|
Preference number: 6 (lower is better) Translates to: IFTNWTDFHQKR*DGLAATYRSMP Trigger: CGGCATGGACCTATATGTGGCAGCAAGTCCATCTCATCGCTTTTGGTGAAAGTCAGTCCAGTTTGTAAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000461990.1 ENST00000467438.1 ENST00000469312.6 ENST00000471417.5 ENST00000476432.5 ENST00000484933.6 ENST00000490006.6 ENST00000587165.1 ENST00000589455.5 ENST00000590653.5 |
||
| CDS GCA 72 bp | TCCTTTTGGTGTCCCAGTTCCTCGTCTACAGTGACCTaGCAACCCCGTGATATTAATGAGATAAACATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SFWCPSSSSTVT*QPRDINEINML Trigger: CAACATGTTTATCTCATTAATATCACGGGGTTGGCAGGTCACTGTAGACGAGGAACTGGGACACCAAAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000461990.1 |
||
| CDS GCA 72 bp | TGTAAATGGAAGGGCTGCTTTTGCAGGTCATCATACTaGAGAAAGTCCATTCCTGGAACACTTTCCAAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: CKWKGCFCRSSY*RKSIPGTLSKA Trigger: TGCCTTGGAAAGTGTTCCAGGAATGGACTTTCTGCAGTATGATGACCTGCAAAAGCAGCCCTTCCATTTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000469312.6 ENST00000490006.6 |
||
| CDS TCA 72 bp | CATCCAACCACCCCGAGCGATGGAGTAACTTGCATTTaGAATAGTTGGTGCAGAAATAACCACTCTCCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: HPTTPSDGVTCI*NSWCRNNHSPF Trigger: AAAAGGAGAGTGGTTATTTCTGCACCAACTATTTCAAATGCAAGTTACTCCATCGCTCGGGGTGGTTGGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000461990.1 ENST00000484933.6 ENST00000590653.5 |
||
| CDS GCA 72 bp | ACTGAGCCTTTTCACTTGCCAGGAGGACACTGTAGATaGATAATAGTTCATAATCCTCACCACAACTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: TEPFHLPGGHCR*IIVHNPHHNSV Trigger: CACAGAGTTGTGGTGAGGATTATGAACTATTATGCATCTACAGTGTCCTCCTGGCAAGTGAAAAGGCTCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467438.1 |
||
| CDS CAA 72 bp | AAGTTCCCCACAAGATTTGGCCTTTGCTCACAAGTTTaGCGGCTGCCAATTAGTTTCCAGAGTCGCTATTTT | + |
|
Preference number: 6 (lower is better) Translates to: KFPTRFGLCSQV*RLPISFQSRYF Trigger: AAAATAGCGACTCTGGAAACTAATTGGCAGCCGCAAAACTTGTGAGCAAAGGCCAAATCTTGTGGGGAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490006.6 |
||
| CDS TCA 72 bp | GACCCTGGTTTCTTATCTAAGTGGGTAATAAGAAGATaGTGCTGTTGTGAGAGTTTAAGTGTAGCTCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: DPGFLSKWVIRR*CCCESLSVAPG Trigger: CCCAGGAGCTACACTTAAACTCTCACAACAGCATCATCTTCTTATTACCCACTTAGATAAGAAACCAGGGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469312.6 |
||
| CDS GCA 72 bp | ACTTGGAGTTTGAAATGTAAATGGAAGGGCTGCTTTTaGAGGTCATCATACTGCAGAAAGTCCATTCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: TWSLKCKWKGCF*RSSYCRKSIPG Trigger: TCCAGGAATGGACTTTCTGCAGTATGATGACCTGCAAAAGCAGCCCTTCCATTTACATTTCAAACTCCAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000469312.6 ENST00000490006.6 |
||
| CDS CCA 72 bp | GCTACTTGGCTCAGAGATGAAGAAATGTACTGTATTTaGGGACAGGTCTATACTGCACCTGGATTCCTATAT | + |
|
Preference number: 6 (lower is better) Translates to: ATWLRDEEMYCI*GQVYTAPGFLY Trigger: ATATAGGAATCCAGGTGCAGTATAGACCTGTCCCCAAATACAGTACATTTCTTCATCTCTGAGCCAAGTAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469312.6 |
||
| CDS CAA 72 bp | CAGCAGGAGGTATTGATAGGTAAAGGAGTATCTGGTTaGGTTTTTAGTCAAAGGGATGGTTTAGCCATACTC | + |
|
Preference number: 6 (lower is better) Translates to: QQEVLIGKGVSG*VFSQRDGLAIL Trigger: GAGTATGGCTAAACCATCCCTTTGACTAAAAACCAAACCAGATACTCCTTTACCTATCAATACCTCCTGCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000461990.1 |
||
| CDS CCA 72 bp | CTTTTGCAGGTCATCATACTGCAGAAAGTCCATTCCTaGAACACTTTCCAAGGCAATGAGAATCTTTACAAA | + |
|
Preference number: 6 (lower is better) Translates to: LLQVIILQKVHS*NTFQGNENLYK Trigger: TTTGTAAAGATTCTCATTGCCTTGGAAAGTGTTCCAGGAATGGACTTTCTGCAGTATGATGACCTGCAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490006.6 |
||
| CDS CCA 72 bp | CTTGCTAAATTGAACAGACACATCGAGATCATCTTCTaGATTTTGCAATCTTTTAGCCAGCTGACATGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LAKLNRHIEIIF*ILQSFSQLTCF Trigger: AAAGCATGTCAGCTGGCTAAAAGATTGCAAAATCCAGAAGATGATCTCGATGTGTCTGTTCAATTTAGCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000461990.1 ENST00000484933.6 ENST00000590653.5 |
||
| CDS GCA 72 bp | TTAATAAGGGCGCACTTTAATGCACTAATGGGGAATTaGATTAGCTGGCTTTGCAGACATAACTTTGAAAAT | + |
|
Preference number: 6 (lower is better) Translates to: LIRAHFNALMGN*ISWLCRHNFEN Trigger: ATTTTCAAAGTTATGTCTGCAAAGCCAGCTAATGCAATTCCCCATTAGTGCATTAAAGTGCGCCCTTATTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000461990.1 ENST00000484933.6 ENST00000590653.5 |
||