Pregenerated sensors for LINC01139 (Homo sapiens)
Ensembl gene IDs: ENSG00000215808Ensembl transcript IDs: ENST00000400946.3, ENST00000648188.1, ENST00000648241.1, ENST00000649127.1, ENST00000649385.1, ENST00000649681.1, ENST00000657655.1
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | AGGAGGAGATCCCATGAGTGCGTGGCAGAAAACGCCAGCCACTCATaGCGCCTTGAGCCAGGTATCCCAGCCCCGGCAGGGAAGGGAGGG | + |
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Preference number: 5 (lower is better) Translates to: RRRSHECVAENASHS*RLEPGIPAPAGKGG Trigger: CCCTCCCTTCCCTGCCGGGGCTGGGATACCTGGCTCAAGGCGTCATGAGTGGCTGGCGTTTTCTGCCACGCACTCATGGGATCTCCTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS CCA 90 bp | TCTGCAAAGCCGGAGTCCCTGCTAGAGCGCTTCCTGCCAAGCCGGTaGAATTTCAGGTTCCACACAGGAAGAGGAGGGGCCAGGCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: SAKPESLLERFLPSR*NFRFHTGRGGARLL Trigger: GAGCAGCCTGGCCCCTCCTCTTCCTGTGTGGAACCTGAAATTCCACCGGCTTGGCAGGAAGCGCTCTAGCAGGGACTCCGGCTTTGCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000400946.3 ENST00000648188.1 ENST00000648241.1 ENST00000649127.1 ENST00000649385.1 ENST00000649681.1 ENST00000657655.1 |
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| CDS GCA 90 bp | TTACTCTTACCCAAGTGGTTCCTCCACCAGGGAGACAAGTTTAATTaGTGTGGGTCAGAGCTGGCCTCCCCGGTGCAGGGAGGAGGAGAT | + |
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Preference number: 5 (lower is better) Translates to: LLLPKWFLHQGDKFN*CGSELASPVQGGGD Trigger: ATCTCCTCCTCCCTGCACCGGGGAGGCCAGCTCTGACCCACAGCAATTAAACTTGTCTCCCTGGTGGAGGAACCACTTGGGTAAGAGTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS CCA 90 bp | AATGTCATCAACTTCCTGAGGTTCCACCCTAGTGCACAGGCCAGATaGAGTTTTCCAGAGACCCCCTCCCACCTGGCTGTCTTATTCCCC | + |
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Preference number: 5 (lower is better) Translates to: NVINFLRFHPSAQAR*SFPETPSHLAVLFP Trigger: GGGGAATAAGACAGCCAGGTGGGAGGGGGTCTCTGGAAAACTCCATCTGGCCTGTGCACTAGGGTGGAACCTCAGGAAGTTGATGACATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000400946.3 ENST00000648188.1 ENST00000648241.1 ENST00000649127.1 ENST00000649385.1 ENST00000649681.1 ENST00000657655.1 |
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| CDS TCA 90 bp | TCCATAAGGTCAGAGTCCCTGCTAGAGAGCTTCTCACCCACAGCTTaGATTCCAGGTTCCACACAGAAAGAAGAGAGGCCAGGCTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: SIRSESLLESFSPTA*IPGSTQKEERPGSS Trigger: GGAGGAGCCTGGCCTCTCTTCTTTCTGTGTGGAACCTGGAATTCAAGCTGTGGGTGAGAAGCTCTCTAGCAGGGACTCTGACCTTATGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000400946.3 ENST00000657655.1 |
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| CDS TCA 90 bp | TGTCTGTCCCATGGCCACAAAAATTTAGGCTCACAGGCCACAGCTTaGATTCCAGGTTCCACACAGAAAGAAGAGAGGCCAGGCTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: CLSHGHKNLGSQATA*IPGSTQKEERPGSS Trigger: GGAGGAGCCTGGCCTCTCTTCTTTCTGTGTGGAACCTGGAATTCAAGCTGTGGCCTGTGAGCCTAAATTTTTGTGGCCATGGGACAGACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648188.1 |
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| CDS CCA 90 bp | AGGCTTGCAGCACACACCATACAGACATGCAAAGCACACCAGGATTaGCCACGGCCCAAGACTAGCCCTACAAATCCTTTTCCACAATTG | + |
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Preference number: 5 (lower is better) Translates to: RLAAHTIQTCKAHQD*PRPKTSPTNPFPQL Trigger: CAATTGTGGAAAAGGATTTGTAGGGCTAGTCTTGGGCCGTGGCCAATCCTGGTGTGCTTTGCATGTCTGTATGGTGTGTGCTGCAAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS TCA 90 bp | GGACAGCTTCCGCATGGGGCTTTTATTGGCTCTGCAAGTCAAGATTaGCTCCGTAAAGGGAAGTATGCCCTTCCAGTCAAAGCCTTGGTA | + |
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Preference number: 5 (lower is better) Translates to: GQLPHGAFIGSASQD*LRKGKYALPVKALV Trigger: TACCAAGGCTTTGACTGGAAGGGCATACTTCCCTTTACGGAGTCAATCTTGACTTGCAGAGCCAATAAAAGCCCCATGCGGAAGCTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS GCA 90 bp | TGGGTTGGCTTAATGGGCAGGAATCAGCTACACTCACTTGTGCTGTaGCTTTTAACTTCCATTATTGTCTGCCTCCGGATCCCTCAGATC | + |
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Preference number: 5 (lower is better) Translates to: WVGLMGRNQLHSLVL*LLTSIIVCLRIPQI Trigger: GATCTGAGGGATCCGGAGGCAGACAATAATGGAAGTTAAAAGGCACAGCACAAGTGAGTGTAGCTGATTCCTGCCCATTAAGCCAACCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS GCA 90 bp | CAGCTACACTCACTTGTGCTGTGCCTTTTAACTTCCATTATTGTCTaGCTCCGGATCCCTCAGATCCAGTTTGACCCAAAGCTTGGGATT | + |
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Preference number: 5 (lower is better) Translates to: QLHSLVLCLLTSIIV*LRIPQIQFDPKLGI Trigger: AATCCCAAGCTTTGGGTCAAACTGGATCTGAGGGATCCGGAGGCAGACAATAATGGAAGTTAAAAGGCACAGCACAAGTGAGTGTAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS CCA 90 bp | CTCCGGATCCCTCAGATCCAGTTTGACCCAAAGCTTGGGATTGCATaGACTCCTTATGATAAGCTGAATGCTAAGGTAAAGCTGTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: LRIPQIQFDPKLGIA*TPYDKLNAKVKLWK Trigger: CTTCCACAGCTTTACCTTAGCATTCAGCTTATCATAAGGAGTCCATGCAATCCCAAGCTTTGGGTCAAACTGGATCTGAGGGATCCGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS TCA 90 bp | TTACGGTCCCAAGATAAACTTGGAGCTCCTGGACCTGTTAGAAAGTaGCACTCTTTACTGATCACAGGTCAGGAACCCTATACAGGGACT | + |
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Preference number: 5 (lower is better) Translates to: LRSQDKLGAPGPVRK*HSLLITGQEPYTGT Trigger: AGTCCCTGTATAGGGTTCCTGACCTGTGATCAGTAAAGAGTGTCACTTTCTAACAGGTCCAGGAGCTCCAAGTTTATCTTGGGACCGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS TCA 90 bp | ATCCTCAGAGGCTCTGGTTGGGTGACTGGTTGGAGTTTGATGGCCTaGAGGCAAGAACAGACGAACCAGGTTATTAGAAAACATGTATCA | + |
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Preference number: 5 (lower is better) Translates to: ILRGSGWVTGWSLMA*RQEQTNQVIRKHVS Trigger: TGATACATGTTTTCTAATAACCTGGTTCGTCTGTTCTTGCCTTCAGGCCATCAAACTCCAACCAGTCACCCAACCAGAGCCTCTGAGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS CCA 90 bp | ATGCCATGGATATTAACGTGGCCTTTATCCATGAAACAAGAAGCCTaGGTTGGCTTAATGGGCAGGAATCAGCTACACTCACTTGTGCTG | + |
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Preference number: 5 (lower is better) Translates to: MPWILTWPLSMKQEA*VGLMGRNQLHSLVL Trigger: CAGCACAAGTGAGTGTAGCTGATTCCTGCCCATTAAGCCAACCCAGGCTTCTTGTTTCATGGATAAAGGCCACGTTAATATCCATGGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS TCA 90 bp | ATAAACTTGGAGCTCCTGGACCTGTTAGAAAGTGACACTCTTTACTaGTCACAGGTCAGGAACCCTATACAGGGACTGAGTATGAGGACA | + |
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Preference number: 5 (lower is better) Translates to: INLELLDLLESDTLY*SQVRNPIQGLSMRT Trigger: TGTCCTCATACTCAGTCCCTGTATAGGGTTCCTGACCTGTGATCAGTAAAGAGTGTCACTTTCTAACAGGTCCAGGAGCTCCAAGTTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS TCA 90 bp | TTCAAGGTTTGGGAAATTAACTCTTTCCAGTTTGGAGGATGCATCTaGGATGAGTGTCCCATAGTACAGGGACACAATTACCTATCTGTG | + |
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Preference number: 5 (lower is better) Translates to: FKVWEINSFQFGGCI*DECPIVQGHNYLSV Trigger: CACAGATAGGTAATTGTGTCCCTGTACTATGGGACACTCATCTCAGATGCATCCTCCAAACTGGAAAGAGTTAATTTCCCAAACCTTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS CAA 90 bp | GATCCCATGAGTGCGTGGCAGAAAACGCCAGCCACTCATGACGCCTaGAGCCAGGTATCCCAGCCCCGGCAGGGAAGGGAGGGCGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: DPMSAWQKTPATHDA*SQVSQPRQGREGGG Trigger: CCCACCGCCCTCCCTTCCCTGCCGGGGCTGGGATACCTGGCTCAAGGCGTCATGAGTGGCTGGCGTTTTCTGCCACGCACTCATGGGATC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS TCA 72 bp | AGCTGGCCTCCCCGGTGCAGGGAGGAGGAGATCCCATaGGTGCGTGGCAGAAAACGCCAGCCACTCATGACG | + |
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Preference number: 6 (lower is better) Translates to: SWPPRCREEEIP*VRGRKRQPLMT Trigger: CGTCATGAGTGGCTGGCGTTTTCTGCCACGCACTCATGGGATCTCCTCCTCCCTGCACCGGGGAGGCCAGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS CAA 72 bp | AGTGCGTGGCAGAAAACGCCAGCCACTCATGACGCCTaGAGCCAGGTATCCCAGCCCCGGCAGGGAAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: SAWQKTPATHDA*SQVSQPRQGRE Trigger: CTCCCTTCCCTGCCGGGGCTGGGATACCTGGCTCAAGGCGTCATGAGTGGCTGGCGTTTTCTGCCACGCACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS CCA 72 bp | CCGGAGTCCCTGCTAGAGCGCTTCCTGCCAAGCCGGTaGAATTTCAGGTTCCACACAGGAAGAGGAGGGGCC | + |
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Preference number: 6 (lower is better) Translates to: PESLLERFLPSR*NFRFHTGRGGA Trigger: GGCCCCTCCTCTTCCTGTGTGGAACCTGAAATTCCACCGGCTTGGCAGGAAGCGCTCTAGCAGGGACTCCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000400946.3 ENST00000648188.1 ENST00000648241.1 ENST00000649127.1 ENST00000649385.1 ENST00000649681.1 ENST00000657655.1 |
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| CDS CCA 72 bp | TCCCCGGTGCAGGGAGGAGGAGATCCCATGAGTGCGTaGCAGAAAACGCCAGCCACTCATGACGCCTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: SPVQGGGDPMSA*QKTPATHDALS Trigger: GCTCAAGGCGTCATGAGTGGCTGGCGTTTTCTGCCACGCACTCATGGGATCTCCTCCTCCCTGCACCGGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS GCA 72 bp | CCCAAGTGGTTCCTCCACCAGGGAGACAAGTTTAATTaGTGTGGGTCAGAGCTGGCCTCCCCGGTGCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: PKWFLHQGDKFN*CGSELASPVQG Trigger: TCCCTGCACCGGGGAGGCCAGCTCTGACCCACAGCAATTAAACTTGTCTCCCTGGTGGAGGAACCACTTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS CCA 72 bp | AGGGTTCCCCGCAGAAGGGGCCATCCTCAGAGGCTCTaGTTGGGTGACTGGTTGGAGTTTGATGGCCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: RVPRRRGHPQRL*LGDWLEFDGLK Trigger: CTTCAGGCCATCAAACTCCAACCAGTCACCCAACCAGAGCCTCTGAGGATGGCCCCTTCTGCGGGGAACCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS CAA 72 bp | GTTCCCCGCAGAAGGGGCCATCCTCAGAGGCTCTGGTaGGGTGACTGGTTGGAGTTTGATGGCCTGAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: VPRRRGHPQRLW*GDWLEFDGLKA Trigger: TGCCTTCAGGCCATCAAACTCCAACCAGTCACCCAACCAGAGCCTCTGAGGATGGCCCCTTCTGCGGGGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS CCA 72 bp | AGGGTTCCCCGCAGAAGGGGCCATCCTCAGAGGCTCTaGTTGGGTGACTGGTTGGAGTTTGATGGCTGTTTG | + |
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Preference number: 6 (lower is better) Translates to: RVPRRRGHPQRL*LGDWLEFDGCL Trigger: CAAACAGCCATCAAACTCCAACCAGTCACCCAACCAGAGCCTCTGAGGATGGCCCCTTCTGCGGGGAACCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000400946.3 ENST00000648188.1 ENST00000649127.1 ENST00000649385.1 ENST00000657655.1 |
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| CDS CCA 72 bp | AGGGTTCCCCGCAGAAGGGGCCATCCTCAGAGGCTCTaGTTGGGTGACTGGTTGGAGTTTGATGGCCAAAGA | + |
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Preference number: 6 (lower is better) Translates to: RVPRRRGHPQRL*LGDWLEFDGQR Trigger: TCTTTGGCCATCAAACTCCAACCAGTCACCCAACCAGAGCCTCTGAGGATGGCCCCTTCTGCGGGGAACCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648241.1 |
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| CDS CCA 72 bp | GGGGCCATCCTCAGAGGCTCTGGTTGGGTGACTGGTTaGAGTTTGATGGCTGTTTGTAGAGCCTCCACAGTG | + |
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Preference number: 6 (lower is better) Translates to: GAILRGSGWVTG*SLMAVCRASTV Trigger: CACTGTGGAGGCTCTACAAACAGCCATCAAACTCCAACCAGTCACCCAACCAGAGCCTCTGAGGATGGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000400946.3 ENST00000648188.1 ENST00000649127.1 ENST00000649385.1 ENST00000657655.1 |
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| CDS CCA 72 bp | TTCCCCGCAGAAGGGGCCATCCTCAGAGGCTCTGGTTaGGTGACTGGTTGGAGTTTGATGGCCAAAGATGTC | + |
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Preference number: 6 (lower is better) Translates to: FPAEGAILRGSG*VTGWSLMAKDV Trigger: GACATCTTTGGCCATCAAACTCCAACCAGTCACCCAACCAGAGCCTCTGAGGATGGCCCCTTCTGCGGGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648241.1 |
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| CDS CAA 72 bp | GTTCCCCGCAGAAGGGGCCATCCTCAGAGGCTCTGGTaGGGTGACTGGTTGGAGTTTGATGGCCAAAGATGT | + |
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Preference number: 6 (lower is better) Translates to: VPRRRGHPQRLW*GDWLEFDGQRC Trigger: ACATCTTTGGCCATCAAACTCCAACCAGTCACCCAACCAGAGCCTCTGAGGATGGCCCCTTCTGCGGGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648241.1 |
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| CDS TCA 72 bp | ATCCCCAAGTTCTGGAGAACTTGGCAAGTGCCACCATaGGTACCAAAGCGGCTTGCACCCATGAAGCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: IPKFWRTWQVPP*VPKRLAPMKLG Trigger: CCCCAGCTTCATGGGTGCAAGCCGCTTTGGTACTCATGGTGGCACTTGCCAAGTTCTCCAGAACTTGGGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS CCA 72 bp | TTCCCCGCAGAAGGGGCCATCCTCAGAGGCTCTGGTTaGGTGACTGGTTGGAGTTTGATGGCTGTTTGTAGA | + |
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Preference number: 6 (lower is better) Translates to: FPAEGAILRGSG*VTGWSLMAVCR Trigger: TCTACAAACAGCCATCAAACTCCAACCAGTCACCCAACCAGAGCCTCTGAGGATGGCCCCTTCTGCGGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000400946.3 ENST00000648188.1 ENST00000649127.1 ENST00000649385.1 ENST00000657655.1 |
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| CDS CCA 72 bp | GGGGCCATCCTCAGAGGCTCTGGTTGGGTGACTGGTTaGAGTTTGATGGCCAAAGATGTCGCAGGACTTTTC | + |
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Preference number: 6 (lower is better) Translates to: GAILRGSGWVTG*SLMAKDVAGLF Trigger: GAAAAGTCCTGCGACATCTTTGGCCATCAAACTCCAACCAGTCACCCAACCAGAGCCTCTGAGGATGGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648241.1 |
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| CDS CCA 72 bp | AGAAGGGGCCATCCTCAGAGGCTCTGGTTGGGTGACTaGTTGGAGTTTGATGGCCAAAGATGTCGCAGGACT | + |
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Preference number: 6 (lower is better) Translates to: RRGHPQRLWLGD*LEFDGQRCRRT Trigger: AGTCCTGCGACATCTTTGGCCATCAAACTCCAACCAGTCACCCAACCAGAGCCTCTGAGGATGGCCCCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648241.1 |
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| CDS CAA 72 bp | AGGGGCCATCCTCAGAGGCTCTGGTTGGGTGACTGGTaGGAGTTTGATGGCCTGAAGGCAAGAACAGACGAA | + |
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Preference number: 6 (lower is better) Translates to: RGHPQRLWLGDW*EFDGLKARTDE Trigger: TTCGTCTGTTCTTGCCTTCAGGCCATCAAACTCCAACCAGTCACCCAACCAGAGCCTCTGAGGATGGCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS TCA 72 bp | CCAGGCTGCTCCCAGCTACAAATGTCATCAACTTCCTaGGGTTCCACCCTAGTGCACAGGCCAGATGGAGTT | + |
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Preference number: 6 (lower is better) Translates to: PGCSQLQMSSTS*GSTLVHRPDGV Trigger: AACTCCATCTGGCCTGTGCACTAGGGTGGAACCTCAGGAAGTTGATGACATTTGTAGCTGGGAGCAGCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000400946.3 ENST00000648188.1 ENST00000648241.1 ENST00000649127.1 ENST00000649385.1 ENST00000649681.1 ENST00000657655.1 |
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| CDS CAA 72 bp | ATCCTCAGAGGCTCTGGTTGGGTGACTGGTTGGAGTTaGATGGCTGTTTGTAGAGCCTCCACAGTGCGTACC | + |
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Preference number: 6 (lower is better) Translates to: ILRGSGWVTGWS*MAVCRASTVRT Trigger: GGTACGCACTGTGGAGGCTCTACAAACAGCCATCAAACTCCAACCAGTCACCCAACCAGAGCCTCTGAGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000400946.3 ENST00000648188.1 ENST00000649127.1 ENST00000649385.1 ENST00000657655.1 |
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| CDS CAA 72 bp | AGGGGCCATCCTCAGAGGCTCTGGTTGGGTGACTGGTaGGAGTTTGATGGCCAAAGATGTCGCAGGACTTTT | + |
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Preference number: 6 (lower is better) Translates to: RGHPQRLWLGDW*EFDGQRCRRTF Trigger: AAAAGTCCTGCGACATCTTTGGCCATCAAACTCCAACCAGTCACCCAACCAGAGCCTCTGAGGATGGCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648241.1 |
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| CDS CCA 72 bp | ATGCCTGCTAGGGTTTCGGTGCGTGGTGCTTGGCTTTaGTTAGGGCTCTTGGTCTTACTCTCCCAAAAAGGA | + |
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Preference number: 6 (lower is better) Translates to: MPARVSVRGAWL*LGLLVLLSQKG Trigger: TCCTTTTTGGGAGAGTAAGACCAAGAGCCCTAACCAAAGCCAAGCACCACGCACCGAAACCCTAGCAGGCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS CCA 72 bp | ATGGTTATGCCTGCTAGGGTTTCGGTGCGTGGTGCTTaGCTTTGGTTAGGGCTCTTGGTCTTACTCTCCCAA | + |
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Preference number: 6 (lower is better) Translates to: MVMPARVSVRGA*LWLGLLVLLSQ Trigger: TTGGGAGAGTAAGACCAAGAGCCCTAACCAAAGCCAAGCACCACGCACCGAAACCCTAGCAGGCATAACCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS CCA 72 bp | GGATGTCTTGTGACACACCCAGATAACTGGTGGCTATaGTTATGCCTGCTAGGGTTTCGGTGCGTGGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: GCLVTHPDNWWL*LCLLGFRCVVL Trigger: AAGCACCACGCACCGAAACCCTAGCAGGCATAACCATAGCCACCAGTTATCTGGGTGTGTCACAAGACATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS CAA 72 bp | GTCAGAGTCCCTGCTAGAGAGCTTCTCACCCACAGCTaGAATTCCAGGTTCCACACAGAAAGAAGAGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: VRVPARELLTHS*NSRFHTERREA Trigger: GGCCTCTCTTCTTTCTGTGTGGAACCTGGAATTCAAGCTGTGGGTGAGAAGCTCTCTAGCAGGGACTCTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000400946.3 ENST00000649127.1 ENST00000657655.1 |
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| CDS CAA 90 bp | ACTTCAGGGAGTGATGGAAGAGCGTCCTTTTTCCATCTGCTGTCCTaGCATCCCCAAGTTCTGGAGAACTTGGCAAGTGCCACCATGAGT | + |
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Preference number: 6 (lower is better) Translates to: TSGSDGRASFFHLLS*HPQVLENLASATMS Trigger: ACTCATGGTGGCACTTGCCAAGTTCTCCAGAACTTGGGGATGCAAGGACAGCAGATGGAAAAAGGACGCTCTTCCATCACTCCCTGAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS TCA 72 bp | TCAGAGTCCCTGCTAGAGAGCTTCTCACCCACAGCTTaGATTCCAGGTTCCACACAGAAAGAAGAGAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: SESLLESFSPTA*IPGSTQKEERP Trigger: TGGCCTCTCTTCTTTCTGTGTGGAACCTGGAATTCAAGCTGTGGGTGAGAAGCTCTCTAGCAGGGACTCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000400946.3 ENST00000649127.1 ENST00000657655.1 |
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| CDS GCA 72 bp | CTTCAGGGAGTGATGGAAGAGCGTCCTTTTTCCATCTaGTGTCCTTGCATCCCCAAGTTCTGGAGAACTTGG | + |
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Preference number: 6 (lower is better) Translates to: LQGVMEERPFSI*CPCIPKFWRTW Trigger: CCAAGTTCTCCAGAACTTGGGGATGCAAGGACAGCAGATGGAAAAAGGACGCTCTTCCATCACTCCCTGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS CCA 72 bp | GCACACACCATACAGACATGCAAAGCACACCAGGATTaGCCACGGCCCAAGACTAGCCCTACAAATCCTTTT | + |
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Preference number: 6 (lower is better) Translates to: AHTIQTCKAHQD*PRPKTSPTNPF Trigger: AAAAGGATTTGTAGGGCTAGTCTTGGGCCGTGGCCAATCCTGGTGTGCTTTGCATGTCTGTATGGTGTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS CAA 72 bp | AGTGATGGAAGAGCGTCCTTTTTCCATCTGCTGTCCTaGCATCCCCAAGTTCTGGAGAACTTGGCAAGTGCC | + |
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Preference number: 6 (lower is better) Translates to: SDGRASFFHLLS*HPQVLENLASA Trigger: GGCACTTGCCAAGTTCTCCAGAACTTGGGGATGCAAGGACAGCAGATGGAAAAAGGACGCTCTTCCATCACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS CCA 72 bp | AGAAAAGGATGTCTTGTGACACACCCAGATAACTGGTaGCTATGGTTATGCCTGCTAGGGTTTCGGTGCGTG | + |
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Preference number: 6 (lower is better) Translates to: RKGCLVTHPDNW*LWLCLLGFRCV Trigger: CACGCACCGAAACCCTAGCAGGCATAACCATAGCCACCAGTTATCTGGGTGTGTCACAAGACATCCTTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS CAA 72 bp | ATCCTCAGAGGCTCTGGTTGGGTGACTGGTTGGAGTTaGATGGCCAAAGATGTCGCAGGACTTTTCCTTAGT | + |
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Preference number: 6 (lower is better) Translates to: ILRGSGWVTGWS*MAKDVAGLFLS Trigger: ACTAAGGAAAAGTCCTGCGACATCTTTGGCCATCAAACTCCAACCAGTCACCCAACCAGAGCCTCTGAGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648241.1 |
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| CDS CAA 72 bp | GTTTCGGTGCGTGGTGCTTGGCTTTGGTTAGGGCTCTaGGTCTTACTCTCCCAAAAAGGAAACTTGCTAGTG | + |
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Preference number: 6 (lower is better) Translates to: VSVRGAWLWLGL*VLLSQKGNLLV Trigger: CACTAGCAAGTTTCCTTTTTGGGAGAGTAAGACCAAGAGCCCTAACCAAAGCCAAGCACCACGCACCGAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS CAA 72 bp | CCATTATTGTCTGCCTCCGGATCCCTCAGATCCAGTTaGACCCAAAGCTTGGGATTGCATGGACTCCTTATG | + |
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Preference number: 6 (lower is better) Translates to: PLLSASGSLRSS*TQSLGLHGLLM Trigger: CATAAGGAGTCCATGCAATCCCAAGCTTTGGGTCAAACTGGATCTGAGGGATCCGGAGGCAGACAATAATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS CAA 72 bp | CCATGGCCACAAAAATTTAGGCTCACAGGCCACAGCTaGAATTCCAGGTTCCACACAGAAAGAAGAGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: PWPQKFRLTGHS*NSRFHTERREA Trigger: GGCCTCTCTTCTTTCTGTGTGGAACCTGGAATTCAAGCTGTGGCCTGTGAGCCTAAATTTTTGTGGCCATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648188.1 |
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| CDS TCA 72 bp | CCGCATGGGGCTTTTATTGGCTCTGCAAGTCAAGATTaGCTCCGTAAAGGGAAGTATGCCCTTCCAGTCAAA | + |
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Preference number: 6 (lower is better) Translates to: PHGAFIGSASQD*LRKGKYALPVK Trigger: TTTGACTGGAAGGGCATACTTCCCTTTACGGAGTCAATCTTGACTTGCAGAGCCAATAAAAGCCCCATGCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS TCA 72 bp | GAGCTCCTGGACCTGTTAGAAAGTGACACTCTTTACTaGTCACAGGTCAGGAACCCTATACAGGGACTGAGT | + |
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Preference number: 6 (lower is better) Translates to: ELLDLLESDTLY*SQVRNPIQGLS Trigger: ACTCAGTCCCTGTATAGGGTTCCTGACCTGTGATCAGTAAAGAGTGTCACTTTCTAACAGGTCCAGGAGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS TCA 72 bp | GGCTCTGGTTGGGTGACTGGTTGGAGTTTGATGGCCTaGAGGCAAGAACAGACGAACCAGGTTATTAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: GSGWVTGWSLMA*RQEQTNQVIRK Trigger: TTTTCTAATAACCTGGTTCGTCTGTTCTTGCCTTCAGGCCATCAAACTCCAACCAGTCACCCAACCAGAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS TCA 72 bp | CATGGCCACAAAAATTTAGGCTCACAGGCCACAGCTTaGATTCCAGGTTCCACACAGAAAGAAGAGAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: HGHKNLGSQATA*IPGSTQKEERP Trigger: TGGCCTCTCTTCTTTCTGTGTGGAACCTGGAATTCAAGCTGTGGCCTGTGAGCCTAAATTTTTGTGGCCATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000648188.1 |
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| CDS TCA 72 bp | GTCCCATGGCCACAAAAATTTAGGCTCACAGGAGCTTaGATTCCAGGTTCCACACAGAAAGAAGAGAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: VPWPQKFRLTGA*IPGSTQKEERP Trigger: TGGCCTCTCTTCTTTCTGTGTGGAACCTGGAATTCAAGCTCCTGTGAGCCTAAATTTTTGTGGCCATGGGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000649385.1 |
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| CDS CCA 72 bp | TTAGTTCAGCTGAAGACGGGGTCCTTGTCTGTCCCATaGCCACAAAAATTTAGGCTCACAGGCTGTTTGAAG | + |
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Preference number: 6 (lower is better) Translates to: LVQLKTGSLSVP*PQKFRLTGCLK Trigger: CTTCAAACAGCCTGTGAGCCTAAATTTTTGTGGCCATGGGACAGACAAGGACCCCGTCTTCAGCTGAACTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000400946.3 ENST00000648241.1 ENST00000649127.1 ENST00000649681.1 ENST00000657655.1 |
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| CDS CCA 72 bp | CCTATACAGGGACTGAGTATGAGGACAGCTTCCGCATaGGGCTTTTATTGGCTCTGCAAGTCAAGATTGACT | + |
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Preference number: 6 (lower is better) Translates to: PIQGLSMRTASA*GFYWLCKSRLT Trigger: AGTCAATCTTGACTTGCAGAGCCAATAAAAGCCCCATGCGGAAGCTGTCCTCATACTCAGTCCCTGTATAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS CAA 90 bp | ACCTCCTGTGTTGCAGGACTTTTCCTCAGTCAGCTAAAGGCATCTTaGTCCGTCCCACAGCCACAAAAATTTAGGCTTGCAGATGGTTTG | + |
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Preference number: 6 (lower is better) Translates to: TSCVAGLFLSQLKAS*SVPQPQKFRLADGL Trigger: CAAACCATCTGCAAGCCTAAATTTTTGTGGCTGTGGGACGGACAAAGATGCCTTTAGCTGACTGAGGAAAAGTCCTGCAACACAGGAGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000649127.1 |
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| CDS CAA 90 bp | GATACCTGTGTTGCAGGACTTTTCCTCAGTCAGCTAAAGGCATCTTaGTCCGTCCCACAGCCACAAAAATTTAGGCTTGCAGATGGTTTG | + |
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Preference number: 6 (lower is better) Translates to: DTCVAGLFLSQLKAS*SVPQPQKFRLADGL Trigger: CAAACCATCTGCAAGCCTAAATTTTTGTGGCTGTGGGACGGACAAAGATGCCTTTAGCTGACTGAGGAAAAGTCCTGCAACACAGGTATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000400946.3 ENST00000648188.1 ENST00000648241.1 ENST00000649385.1 ENST00000649681.1 ENST00000657655.1 |
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| CDS GCA 72 bp | TCACTTGTGCTGTGCCTTTTAACTTCCATTATTGTCTaGCTCCGGATCCCTCAGATCCAGTTTGACCCAAAG | + |
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Preference number: 6 (lower is better) Translates to: SLVLCLLTSIIV*LRIPQIQFDPK Trigger: CTTTGGGTCAAACTGGATCTGAGGGATCCGGAGGCAGACAATAATGGAAGTTAAAAGGCACAGCACAAGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS CCA 72 bp | AACGTGGCCTTTATCCATGAAACAAGAAGCCTGGGTTaGCTTAATGGGCAGGAATCAGCTACACTCACTTGT | + |
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Preference number: 6 (lower is better) Translates to: NVAFIHETRSLG*LNGQESATLTC Trigger: ACAAGTGAGTGTAGCTGATTCCTGCCCATTAAGCCAACCCAGGCTTCTTGTTTCATGGATAAAGGCCACGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS CAA 72 bp | GTTGCAGGACTTTTCCTCAGTCAGCTAAAGGCATCTTaGTCCGTCCCACAGCCACAAAAATTTAGGCTTGCA | + |
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Preference number: 6 (lower is better) Translates to: VAGLFLSQLKAS*SVPQPQKFRLA Trigger: TGCAAGCCTAAATTTTTGTGGCTGTGGGACGGACAAAGATGCCTTTAGCTGACTGAGGAAAAGTCCTGCAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000400946.3 ENST00000648188.1 ENST00000648241.1 ENST00000649127.1 ENST00000649385.1 ENST00000649681.1 ENST00000657655.1 |
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| CDS TCA 72 bp | GGCCCAAGACTAGCCCTACAAATCCTTTTCCACAATTaGAGCTTTACAGAGACTAAGTTCACTGCTGACTGG | + |
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Preference number: 6 (lower is better) Translates to: GPRLALQILFHN*SFTETKFTADW Trigger: CCAGTCAGCAGTGAACTTAGTCTCTGTAAAGCTTCAATTGTGGAAAAGGATTTGTAGGGCTAGTCTTGGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS GCA 72 bp | CATGCATTTCACTCACTGTTTGTAGAGCCTCCACAGTaGGTACCAAAGATGTCGCAGGACTTTTCCTTAGTT | + |
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Preference number: 6 (lower is better) Translates to: HAFHSLFVEPPQ*VPKMSQDFSLV Trigger: AACTAAGGAAAAGTCCTGCGACATCTTTGGTACGCACTGTGGAGGCTCTACAAACAGTGAGTGAAATGCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS GCA 72 bp | TTAATGGGCAGGAATCAGCTACACTCACTTGTGCTGTaGCTTTTAACTTCCATTATTGTCTGCCTCCGGATC | + |
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Preference number: 6 (lower is better) Translates to: LMGRNQLHSLVL*LLTSIIVCLRI Trigger: GATCCGGAGGCAGACAATAATGGAAGTTAAAAGGCACAGCACAAGTGAGTGTAGCTGATTCCTGCCCATTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS CAA 90 bp | TGGCTTTGGTTAGGGCTCTTGGTCTTACTCTCCCAAAAAGGAAACTaGCTAGTGATGGACATTCTATTTATTCCCATCACCTGGCAGGAT | + |
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Preference number: 6 (lower is better) Translates to: WLWLGLLVLLSQKGN*LVMDILFIPITWQD Trigger: ATCCTGCCAGGTGATGGGAATAAATAGAATGTCCATCACTAGCAAGTTTCCTTTTTGGGAGAGTAAGACCAAGAGCCCTAACCAAAGCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS TCA 72 bp | CAAGATAAACTTGGAGCTCCTGGACCTGTTAGAAAGTaGCACTCTTTACTGATCACAGGTCAGGAACCCTAT | + |
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Preference number: 6 (lower is better) Translates to: QDKLGAPGPVRK*HSLLITGQEPY Trigger: ATAGGGTTCCTGACCTGTGATCAGTAAAGAGTGTCACTTTCTAACAGGTCCAGGAGCTCCAAGTTTATCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS CCA 72 bp | ATATTAACGTGGCCTTTATCCATGAAACAAGAAGCCTaGGTTGGCTTAATGGGCAGGAATCAGCTACACTCA | + |
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Preference number: 6 (lower is better) Translates to: ILTWPLSMKQEA*VGLMGRNQLHS Trigger: TGAGTGTAGCTGATTCCTGCCCATTAAGCCAACCCAGGCTTCTTGTTTCATGGATAAAGGCCACGTTAATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS CAA 90 bp | TTTAAAGCCATCCTAGCCATGGGTTTATTCTCAAATACATGTGAGTaGGGTCATCCTCTCCTCTTACGGTCCCAAGATAAACTTGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: FKAILAMGLFSNTCE*GHPLLLRSQDKLGA Trigger: AGCTCCAAGTTTATCTTGGGACCGTAAGAGGAGAGGATGACCCAACTCACATGTATTTGAGAATAAACCCATGGCTAGGATGGCTTTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS TCA 72 bp | TGGGAAATTAACTCTTTCCAGTTTGGAGGATGCATCTaGGATGAGTGTCCCATAGTACAGGGACACAATTAC | + |
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Preference number: 6 (lower is better) Translates to: WEINSFQFGGCI*DECPIVQGHNY Trigger: GTAATTGTGTCCCTGTACTATGGGACACTCATCTCAGATGCATCCTCCAAACTGGAAAGAGTTAATTTCCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS CAA 72 bp | ATCCTAGCCATGGGTTTATTCTCAAATACATGTGAGTaGGGTCATCCTCTCCTCTTACGGTCCCAAGATAAA | + |
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Preference number: 6 (lower is better) Translates to: ILAMGLFSNTCE*GHPLLLRSQDK Trigger: TTTATCTTGGGACCGTAAGAGGAGAGGATGACCCAACTCACATGTATTTGAGAATAAACCCATGGCTAGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS CAA 72 bp | TTAGGGCTCTTGGTCTTACTCTCCCAAAAAGGAAACTaGCTAGTGATGGACATTCTATTTATTCCCATCACC | + |
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Preference number: 6 (lower is better) Translates to: LGLLVLLSQKGN*LVMDILFIPIT Trigger: GGTGATGGGAATAAATAGAATGTCCATCACTAGCAAGTTTCCTTTTTGGGAGAGTAAGACCAAGAGCCCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS CAA 90 bp | TGCTTCAGCTTCCTGAGTTCAGTCCATCTAGTTAACTCGTTTTGCTaGGTATTTGTGAATATTTCAGCTCTTTATGAGCCCCATAAATTT | + |
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Preference number: 6 (lower is better) Translates to: CFSFLSSVHLVNSFC*VFVNISALYEPHKF Trigger: AAATTTATGGGGCTCATAAAGAGCTGAAATATTCACAAATACCAAGCAAAACGAGTTAACTAGATGGACTGAACTCAGGAAGCTGAAGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS TCA 72 bp | AATAATTATTTCTACACAGGCCTTTTAGATTGGCTTTaGTGGAACTCTGTTCCTCAAGGGATCTCAGATAAG | + |
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Preference number: 6 (lower is better) Translates to: NNYFYTGLLDWL*WNSVPQGISDK Trigger: CTTATCTGAGATCCCTTGAGGAACAGAGTTCCATCAAAGCCAATCTAAAAGGCCTGTGTAGAAATAATTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS GCA 72 bp | AGCTTCCTGAGTTCAGTCCATCTAGTTAACTCGTTTTaGTTGGTATTTGTGAATATTTCAGCTCTTTATGAG | + |
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Preference number: 6 (lower is better) Translates to: SFLSSVHLVNSF*LVFVNISALYE Trigger: CTCATAAAGAGCTGAAATATTCACAAATACCAAGCAAAACGAGTTAACTAGATGGACTGAACTCAGGAAGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000649681.1 |
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| CDS CAA 72 bp | ACATGTAAGGGGCTAATACATGCATCAGGACATTACTaGCACAAAGGTAACCCTTTTGTTAAGGATTATTTC | + |
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Preference number: 6 (lower is better) Translates to: TCKGLIHASGHY*HKGNPFVKDYF Trigger: GAAATAATCCTTAACAAAAGGGTTACCTTTGTGCAAGTAATGTCCTGATGCATGTATTAGCCCCTTACATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649127.1 |
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