Pregenerated sensors for LINC01138 (Homo sapiens)
Ensembl gene IDs: ENSG00000274020Ensembl transcript IDs: ENST00000434245.3, ENST00000445201.2, ENST00000613452.1, ENST00000614292.1, ENST00000622328.1, ENST00000638958.1, ENST00000639159.1, ENST00000639181.1, ENST00000640832.1, ENST00000652758.1, ENST00000653634.1, ENST00000658866.1, ENST00000658938.1
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AAGGGCCTTCCGAGCTGCTCAGGCGACCCAGCCTTCCATCGCTGCTaGTCTAGTGTTCGGTTGGCCTGGGCCACACTCAACTGTAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: KGLPSCSGDPAFHRC*SSVRLAWATLNCRE Trigger: CTCCCTACAGTTGAGTGTGGCCCAGGCCAACCGAACACTAGAGCAGCAGCGATGGAAGGCTGGGTCGCCTGAGCAGCTCGGAAGGCCCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000614292.1 |
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| CDS GCA 90 bp | AAAAAGGGCCTTCCGAGCTGCTCAGGCGACCCAGCCTTCCATCGCTaGTGCTCTAGTGTTCGGTTGGCCTGGGCCACACTCAACTGTAGG | + |
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Preference number: 5 (lower is better) Translates to: KKGLPSCSGDPAFHR*CSSVRLAWATLNCR Trigger: CCTACAGTTGAGTGTGGCCCAGGCCAACCGAACACTAGAGCAGCAGCGATGGAAGGCTGGGTCGCCTGAGCAGCTCGGAAGGCCCTTTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000614292.1 |
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| CDS CCA 90 bp | TTGCCGGCCAATGTGAGACAGTCATTAAGTGGAGATGGCTCATCATaGAGGTCTTCATCCTTGTCTTCACAAGTAGGCTCAAATGTGCTC | + |
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Preference number: 5 (lower is better) Translates to: LPANVRQSLSGDGSS*RSSSLSSQVGSNVL Trigger: GAGCACATTTGAGCCTACTTGTGAAGACAAGGATGAAGACCTCCATGATGAGCCATCTCCACTTAATGACTGTCTCACATTGGCCGGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000639159.1 ENST00000658866.1 |
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| CDS TCA 90 bp | GATGGCTCATCATGGAGGTCTTCATCCTTGTCTTCACAAGTAGGCTaGAGAGGAGGAAATACAGGATGTATTGGTCTTGCTGTTCAGGGT | + |
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Preference number: 5 (lower is better) Translates to: DGSSWRSSSLSSQVG*RGGNTGCIGLAVQG Trigger: ACCCTGAACAGCAAGACCAATACATCCTGTATTTCCTCCTCTTCAGCCTACTTGTGAAGACAAGGATGAAGACCTCCATGATGAGCCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000613452.1 ENST00000614292.1 ENST00000639181.1 ENST00000653634.1 ENST00000658938.1 |
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| CDS TCA 90 bp | TACTCATGGGCAGGTCAGACTTTTGGTTCTATTCAGGCCTTTAAGTaGTTGGATGAGGATCATTTGTTAGGAGGGTCTCAGTGCAGAAGC | + |
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Preference number: 5 (lower is better) Translates to: YSWAGQTFGSIQAFK*LDEDHLLGGSQCRS Trigger: GCTTCTGCACTGAGACCCTCCTAACAAATGATCCTCATCCAATCACTTAAAGGCCTGAATAGAACCAAAAGTCTGACCTGCCCATGAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434245.3 |
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| CDS TCA 90 bp | TCCAGAGAAACAGAACCAACAATTGACTCATGTGATTATGGAGGCTaGGAAGTCTCAAGATCACAGTTGGCAAGCTTGAGACACAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: SRETEPTIDSCDYGG*EVSRSQLASLRHRR Trigger: TCTCCTGTGTCTCAAGCTTGCCAACTGTGATCTTGAGACTTCTCAGCCTCCATAATCACATGAGTCAATTGTTGGTTCTGTTTCTCTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000434245.3 ENST00000445201.2 ENST00000638958.1 ENST00000640832.1 ENST00000652758.1 |
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| CDS TCA 90 bp | CTTCTGGTCATATCTGAAAACATGATGTTTCAGTCAAAGCCTTGGTaGTATAACCTGTGTTTCCAGTTTGTCTCTGTCGCCCAGGATGGA | + |
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Preference number: 5 (lower is better) Translates to: LLVISENMMFQSKPW*YNLCFQFVSVAQDG Trigger: TCCATCCTGGGCGACAGAGACAAACTGGAAACACAGGTTATATCACCAAGGCTTTGACTGAAACATCATGTTTTCAGATATGACCAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639181.1 |
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| CDS CCA 90 bp | AAGTCTGGGAACCCTAGAGCCAGTTTTTCCAAGATGGTACTTTATTaGTTCCATAAAGCCAACTTTAGTCCCCTAAAGCCTTCTGGTCAT | + |
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Preference number: 5 (lower is better) Translates to: KSGNPRASFSKMVLY*FHKANFSPLKPSGH Trigger: ATGACCAGAAGGCTTTAGGGGACTAAAGTTGGCTTTATGGAACCAATAAAGTACCATCTTGGAAAAACTGGCTCTAGGGTTCCCAGACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000639159.1 ENST00000639181.1 ENST00000653634.1 ENST00000658866.1 ENST00000658938.1 |
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| CDS TCA 90 bp | CTTCTGGTCATATCTGAAAACATGATGTTTCAGTCAAAGCCTTGGTaGTATAACCTGTGTTTCCAGTTTGTCAGTTGTGCAGGCTGGGAA | + |
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Preference number: 5 (lower is better) Translates to: LLVISENMMFQSKPW*YNLCFQFVSCAGWE Trigger: TTCCCAGCCTGCACAACTGACAAACTGGAAACACAGGTTATATCACCAAGGCTTTGACTGAAACATCATGTTTTCAGATATGACCAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000639159.1 ENST00000653634.1 ENST00000658866.1 ENST00000658938.1 |
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| CDS CCA 90 bp | CTTTTAATTGCATGCCAATTAAGAGGTAGGTTATTCAGAACTTTCTaGGAAAGGGGCAGGGAGTTTCCAGAACCATATAAAGTAACTTCC | + |
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Preference number: 5 (lower is better) Translates to: LLIACQLRGRLFRTF*ERGREFPEPYKVTS Trigger: GGAAGTTACTTTATATGGTTCTGGAAACTCCCTGCCCCTTTCCCAGAAAGTTCTGAATAACCTACCTCTTAATTGGCATGCAATTAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000613452.1 ENST00000639159.1 ENST00000639181.1 ENST00000653634.1 ENST00000658866.1 ENST00000658938.1 |
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| CDS GCA 72 bp | CCGAGCTGCTCAGGCGACCCAGCCTTCCATCGCTGCTaGTCTAGTGTTCGGTTGGCCTGGGCCACACTCAAC | + |
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Preference number: 6 (lower is better) Translates to: PSCSGDPAFHRC*SSVRLAWATLN Trigger: GTTGAGTGTGGCCCAGGCCAACCGAACACTAGAGCAGCAGCGATGGAAGGCTGGGTCGCCTGAGCAGCTCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000614292.1 |
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| CDS GCA 72 bp | CTTCCGAGCTGCTCAGGCGACCCAGCCTTCCATCGCTaGTGCTCTAGTGTTCGGTTGGCCTGGGCCACACTC | + |
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Preference number: 6 (lower is better) Translates to: LPSCSGDPAFHR*CSSVRLAWATL Trigger: GAGTGTGGCCCAGGCCAACCGAACACTAGAGCAGCAGCGATGGAAGGCTGGGTCGCCTGAGCAGCTCGGAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000614292.1 |
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| CDS TCA 72 bp | ACTAGTGCCATGGTTGCAGGGGCGGTGAGTTTGCAGTaGCATGAGATCATGCCACTGCACTCCATCTTGGGT | + |
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Preference number: 6 (lower is better) Translates to: TSAMVAGAVSLQ*HEIMPLHSILG Trigger: ACCCAAGATGGAGTGCAGTGGCATGATCTCATGTCACTGCAAACTCACCGCCCCTGCAACCATGGCACTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622328.1 |
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| CDS TCA 72 bp | TCTGGAGGATCACTAGTGCCATGGTTGCAGGGGCGGTaGGTTTGCAGTGACATGAGATCATGCCACTGCACT | + |
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Preference number: 6 (lower is better) Translates to: SGGSLVPWLQGR*VCSDMRSCHCT Trigger: AGTGCAGTGGCATGATCTCATGTCACTGCAAACTCACCGCCCCTGCAACCATGGCACTAGTGATCCTCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622328.1 |
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| CDS TCA 72 bp | AAGGGCGGAGGTTCATCTTCTGTAACTGCTTCCTGCTaGTGTTATGGGCATAGACCCTGCCTAGCACTGGAG | + |
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Preference number: 6 (lower is better) Translates to: KGGGSSSVTASC*CYGHRPCLALE Trigger: CTCCAGTGCTAGGCAGGGTCTATGCCCATAACATCAGCAGGAAGCAGTTACAGAAGATGAACCTCCGCCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000613452.1 ENST00000639159.1 ENST00000639181.1 ENST00000653634.1 ENST00000658866.1 ENST00000658938.1 |
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| CDS CAA 72 bp | TGCTGGTTTCAGCAGGCTTCTCCACTGCACCCTGTTTaGACCAGATCCTGCTCTGTTCAATGGGGTTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: CWFQQASPLHPV*TRSCSVQWGWE Trigger: TTCCCAACCCCATTGAACAGAGCAGGATCTGGTCAAAACAGGGTGCAGTGGAGAAGCCTGCTGAAACCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000613452.1 ENST00000639159.1 ENST00000639181.1 ENST00000653634.1 ENST00000658866.1 ENST00000658938.1 |
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| CDS CAA 90 bp | ACCAGGAGAGATGATGGTGTGATTACAGTTCAAAAGCTGGCAGGCTaGAGGCCCAGGAAGAGCCAGTGTTGCAGTTCAATTCCAAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: TRRDDGVITVQKLAG*RPRKSQCCSSIPKA Trigger: TGCCTTTGGAATTGAACTGCAACACTGGCTCTTCCTGGGCCTCAAGCCTGCCAGCTTTTGAACTGTAATCACACCATCATCTCTCCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000434245.3 ENST00000445201.2 ENST00000638958.1 ENST00000640832.1 ENST00000652758.1 |
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| CDS GCA 72 bp | ACCTCTAGATTAACAGCCGAACGCGCTAACCGATTGTaGCACAGAGACAGGTATTGTACCTTCTTCTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: TSRLTAERANRL*HRDRYCTFFWA Trigger: TGCCCAGAAGAAGGTACAATACCTGTCTCTGTGGCACAATCGGTTAGCGCGTTCGGCTGTTAATCTAGAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622328.1 |
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| CDS CAA 72 bp | CCAACCTCTAGATTAACAGCCGAACGCGCTAACCGATaGTGCCACAGAGACAGGTATTGTACCTTCTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: PTSRLTAERANR*CHRDRYCTFFW Trigger: CCAGAAGAAGGTACAATACCTGTCTCTGTGGCACAATCGGTTAGCGCGTTCGGCTGTTAATCTAGAGGTTGG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622328.1 |
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| CDS CAA 90 bp | AGGGGCAGGGAGTTTCCAGAACCATATAAAGTAACTTCCAGGCCATaGCCAAGGTGTGTTGCCATGACATTTGTAAACTGGCCATGGTCC | + |
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Preference number: 6 (lower is better) Translates to: RGREFPEPYKVTSRP*PRCVAMTFVNWPWS Trigger: GGACCATGGCCAGTTTACAAATGTCATGGCAACACACCTTGGCAATGGCCTGGAAGTTACTTTATATGGTTCTGGAAACTCCCTGCCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000613452.1 ENST00000639159.1 ENST00000639181.1 ENST00000653634.1 ENST00000658866.1 ENST00000658938.1 |
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| CDS CCA 72 bp | GTTGCCGGCCAATGTGAGACAGTCATTAAGTGGAGATaGCTCATCATGGAGGTCTTCATCCTTGTCTTCACA | + |
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Preference number: 6 (lower is better) Translates to: VAGQCETVIKWR*LIMEVFILVFT Trigger: TGTGAAGACAAGGATGAAGACCTCCATGATGAGCCATCTCCACTTAATGACTGTCTCACATTGGCCGGCAAC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000613452.1 ENST00000614292.1 ENST00000639159.1 ENST00000639181.1 ENST00000653634.1 ENST00000658866.1 ENST00000658938.1 |
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| CDS CCA 72 bp | CTGCACCCTGTTTTGACCAGATCCTGCTCTGTTCAATaGGGTTGGGAATGGAAAATAAGTCCTTCTGGTCTC | + |
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Preference number: 6 (lower is better) Translates to: LHPVLTRSCSVQ*GWEWKISPSGL Trigger: GAGACCAGAAGGACTTATTTTCCATTCCCAACCCCATTGAACAGAGCAGGATCTGGTCAAAACAGGGTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000613452.1 ENST00000639159.1 ENST00000639181.1 ENST00000653634.1 ENST00000658866.1 ENST00000658938.1 |
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| CDS CAA 90 bp | ATCATCATCTGCTGGTTTCAGCAGGCTTCTCCACTGCACCCTGTTTaGACCAGATCCTGCTCTGTTCAATGGGGTTGGGAATGGAAAATA | + |
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Preference number: 6 (lower is better) Translates to: IIICWFQQASPLHPV*TRSCSVQWGWEWKI Trigger: TATTTTCCATTCCCAACCCCATTGAACAGAGCAGGATCTGGTCAAAACAGGGTGCAGTGGAGAAGCCTGCTGAAACCAGCAGATGATGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000613452.1 ENST00000639159.1 ENST00000639181.1 ENST00000653634.1 ENST00000658866.1 ENST00000658938.1 |
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| CDS CAA 90 bp | ATCAGGCAGAAGGAGCTCTCTCTTACTCATGGGCAGGTCAGACTTTaGGTTCTATTCAGGCCTTTAAGTGATTGGATGAGGATCATCTAC | + |
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Preference number: 6 (lower is better) Translates to: IRQKELSLTHGQVRL*VLFRPLSDWMRIIY Trigger: GTAGATGATCCTCATCCAATCACTTAAAGGCCTGAATAGAACCAAAAGTCTGACCTGCCCATGAGTAAGAGAGAGCTCCTTCTGCCTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000445201.2 ENST00000652758.1 |
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| CDS CAA 72 bp | TTAAGTGGAGATGGCTCATCATGGAGGTCTTCATCCTaGTCTTCACAAGTAGGCTCAAATGTGCTCACGATG | + |
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Preference number: 6 (lower is better) Translates to: LSGDGSSWRSSS*SSQVGSNVLTM Trigger: CATCGTGAGCACATTTGAGCCTACTTGTGAAGACAAGGATGAAGACCTCCATGATGAGCCATCTCCACTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000639159.1 ENST00000658866.1 |
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| CDS CAA 90 bp | ATCAGGCAGAAGGAGCTCTCTCTTACTCATGGGCAGGTCAGACTTTaGGTTCTATTCAGGCCTTTAAGTGATTGGATGAGGATCATTTGT | + |
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Preference number: 6 (lower is better) Translates to: IRQKELSLTHGQVRL*VLFRPLSDWMRIIC Trigger: ACAAATGATCCTCATCCAATCACTTAAAGGCCTGAATAGAACCAAAAGTCTGACCTGCCCATGAGTAAGAGAGAGCTCCTTCTGCCTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434245.3 |
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| CDS CAA 90 bp | ATCAGGCAGAAGGAGCTCTCTCTTACTCATGGGCAGGTCAGACTTTaGGTTCTATTCAGGCCTTTAAGTGATTGGATGAGGATCATCTTT | + |
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Preference number: 6 (lower is better) Translates to: IRQKELSLTHGQVRL*VLFRPLSDWMRIIF Trigger: AAAGATGATCCTCATCCAATCACTTAAAGGCCTGAATAGAACCAAAAGTCTGACCTGCCCATGAGTAAGAGAGAGCTCCTTCTGCCTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000638958.1 ENST00000640832.1 |
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| CDS TCA 72 bp | GCAGGTCAGACTTTTGGTTCTATTCAGGCCTTTAAGTaGTTGGATGAGGATCATTTGTTAGGAGGGTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: AGQTFGSIQAFK*LDEDHLLGGSQ Trigger: CTGAGACCCTCCTAACAAATGATCCTCATCCAATCACTTAAAGGCCTGAATAGAACCAAAAGTCTGACCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000434245.3 |
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| CDS TCA 72 bp | TCATGGAGGTCTTCATCCTTGTCTTCACAAGTAGGCTaGAGAGGAGGAAATACAGGATGTATTGGTCTTGCT | + |
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Preference number: 6 (lower is better) Translates to: SWRSSSLSSQVG*RGGNTGCIGLA Trigger: AGCAAGACCAATACATCCTGTATTTCCTCCTCTTCAGCCTACTTGTGAAGACAAGGATGAAGACCTCCATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000613452.1 ENST00000614292.1 ENST00000639181.1 ENST00000653634.1 ENST00000658938.1 |
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| CDS CCA 72 bp | AATGTGAGACAGTCATTAAGTGGAGATGGCTCATCATaGAGGTCTTCATCCTTGTCTTCACAAGTAGGCTCA | + |
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Preference number: 6 (lower is better) Translates to: NVRQSLSGDGSS*RSSSLSSQVGS Trigger: TGAGCCTACTTGTGAAGACAAGGATGAAGACCTCCATGATGAGCCATCTCCACTTAATGACTGTCTCACATT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000639159.1 ENST00000658866.1 |
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| CDS CAA 72 bp | TCAGAGATTATATACTCCTCCTTAATCTTAAGGGGCTaGCAGAAGGGCGGAGGTTCATCTTCTGTAACTGCT | + |
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Preference number: 6 (lower is better) Translates to: SEIIYSSLILRG*QKGGGSSSVTA Trigger: AGCAGTTACAGAAGATGAACCTCCGCCCTTCTGCAAGCCCCTTAAGATTAAGGAGGAGTATATAATCTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000613452.1 ENST00000639159.1 ENST00000639181.1 ENST00000653634.1 ENST00000658866.1 ENST00000658938.1 |
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| CDS TCA 72 bp | ACAGAACCAACAATTGACTCATGTGATTATGGAGGCTaGGAAGTCTCAAGATCACAGTTGGCAAGCTTGAGA | + |
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Preference number: 6 (lower is better) Translates to: TEPTIDSCDYGG*EVSRSQLASLR Trigger: TCTCAAGCTTGCCAACTGTGATCTTGAGACTTCTCAGCCTCCATAATCACATGAGTCAATTGTTGGTTCTGT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000434245.3 ENST00000445201.2 ENST00000638958.1 ENST00000640832.1 ENST00000652758.1 |
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| CDS CCA 72 bp | GCATGCCAATTAAGAGGTAGGTTATTCAGAACTTTCTaGGAAAGGGGCAGGGAGTTTCCAGAACCATATAAA | + |
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Preference number: 6 (lower is better) Translates to: ACQLRGRLFRTF*ERGREFPEPYK Trigger: TTTATATGGTTCTGGAAACTCCCTGCCCCTTTCCCAGAAAGTTCTGAATAACCTACCTCTTAATTGGCATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000613452.1 ENST00000639159.1 ENST00000639181.1 ENST00000653634.1 ENST00000658866.1 ENST00000658938.1 |
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| CDS CAA 72 bp | GAGTTTCCAGAACCATATAAAGTAACTTCCAGGCCATaGCCAAGGTGTGTTGCCATGACATTTGTAAACTGG | + |
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Preference number: 6 (lower is better) Translates to: EFPEPYKVTSRP*PRCVAMTFVNW Trigger: CCAGTTTACAAATGTCATGGCAACACACCTTGGCAATGGCCTGGAAGTTACTTTATATGGTTCTGGAAACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000613452.1 ENST00000639159.1 ENST00000639181.1 ENST00000653634.1 ENST00000658866.1 ENST00000658938.1 |
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| CDS TCA 72 bp | TTATTTGAAGAAAGGGCCGATCATAAACTGGGTAGCTaGTCCACAACAGACATTTCTCACAGTTCTGGAGTT | + |
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Preference number: 6 (lower is better) Translates to: LFEERADHKLGS*STTDISHSSGV Trigger: AACTCCAGAACTGTGAGAAATGTCTGTTGTGGATCAGCTACCCAGTTTATGATCGGCCCTTTCTTCAAATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000434245.3 |
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| CDS TCA 72 bp | GCCAACTTTAGTCCCCTAAAGCCTTCTGGTCATATCTaGAAACATGATGTTTCAGTCAAAGCCTTGGTGATA | + |
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Preference number: 6 (lower is better) Translates to: ANFSPLKPSGHI*KHDVSVKALVI Trigger: TATCACCAAGGCTTTGACTGAAACATCATGTTTTCAGATATGACCAGAAGGCTTTAGGGGACTAAAGTTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000639159.1 ENST00000639181.1 ENST00000653634.1 ENST00000658866.1 ENST00000658938.1 |
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| CDS TCA 72 bp | ATGGTATTGTGTTATATCTGTTCTAGAAATTCACCTTaGTGGCGCCACACAGGATGCCCTCTTTTCATCACT | + |
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Preference number: 6 (lower is better) Translates to: MVLCYICSRNSP*WRHTGCPLFIT Trigger: AGTGATGAAAAGAGGGCATCCTGTGTGGCGCCATCAAGGTGAATTTCTAGAACAGATATAACACAATACCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000638958.1 |
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| CDS TCA 72 bp | ATATCTGAAAACATGATGTTTCAGTCAAAGCCTTGGTaGTATAACCTGTGTTTCCAGTTTGTCTCTGTCGCC | + |
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Preference number: 6 (lower is better) Translates to: ISENMMFQSKPW*YNLCFQFVSVA Trigger: GGCGACAGAGACAAACTGGAAACACAGGTTATATCACCAAGGCTTTGACTGAAACATCATGTTTTCAGATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000639181.1 |
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| CDS CCA 72 bp | GTCAGACTTTTGGTTCTATTCAGGCCTTTAAGTGATTaGATGAGGATCATCTACTTTAGGTCTTTTCTTCCG | + |
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Preference number: 6 (lower is better) Translates to: VRLLVLFRPLSD*MRIIYFRSFLP Trigger: CGGAAGAAAAGACCTAAAGTAGATGATCCTCATCCAATCACTTAAAGGCCTGAATAGAACCAAAAGTCTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000445201.2 ENST00000652758.1 |
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| CDS CCA 72 bp | GTCAGACTTTTGGTTCTATTCAGGCCTTTAAGTGATTaGATGAGGATCATCTTTAGGTCTTTTCTTCCGTTC | + |
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Preference number: 6 (lower is better) Translates to: VRLLVLFRPLSD*MRIIFRSFLPF Trigger: GAACGGAAGAAAAGACCTAAAGATGATCCTCATCCAATCACTTAAAGGCCTGAATAGAACCAAAAGTCTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000638958.1 ENST00000640832.1 |
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