Pregenerated sensors for LINC01137 (Homo sapiens)
Ensembl gene IDs: ENSG00000233621Ensembl transcript IDs: ENST00000424989.1, ENST00000668045.1
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TCCTGGTACCGCCGTCCGCACCTCGGTCAGTGCGTCCCCGGCAGGTaGGTGTACCTGATTCAGTCCGTGCTTATCTTGCGCATACGGGCC | + |
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Preference number: 5 (lower is better) Translates to: SWYRRPHLGQCVPGR*VYLIQSVLILRIRA Trigger: GGCCCGTATGCGCAAGATAAGCACGGACTGAATCAGGTACACGCACCTGCCGGGGACGCACTGACCGAGGTGCGGACGGCGGTACCAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000424989.1 ENST00000668045.1 |
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| CDS GCA 90 bp | GGAAATGACTGGCAGAGCAGGGATTCAAACCCAGGTCCCTGTGGGTaGCTCTGCCCAGCCGCCTGCAGGGTCTGCAGGTGGCCATGTCCC | + |
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Preference number: 5 (lower is better) Translates to: GNDWQSRDSNPGPCG*LCPAACRVCRWPCP Trigger: GGGACATGGCCACCTGCAGACCCTGCAGGCGGCTGGGCAGAGGCACCCACAGGGACCTGGGTTTGAATCCCTGCTCTGCCAGTCATTTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000424989.1 |
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| CDS TCA 90 bp | GCCGTCCGCACCTCGGTCAGTGCGTCCCCGGCAGGTGCGTGTACCTaGTTCAGTCCGTGCTTATCTTGCGCATACGGGCCGTTCAGTGTC | + |
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Preference number: 5 (lower is better) Translates to: AVRTSVSASPAGACT*FSPCLSCAYGPFSV Trigger: GACACTGAACGGCCCGTATGCGCAAGATAAGCACGGACTGAATCAGGTACACGCACCTGCCGGGGACGCACTGACCGAGGTGCGGACGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000424989.1 ENST00000668045.1 |
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| CDS GCA 90 bp | TCGCGGCTTTACCTGTCCTGGTACCGCCGTCCGCACCTCGGTCAGTaGGTCCCCGGCAGGTGCGTGTACCTGATTCAGTCCGTGCTTATC | + |
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Preference number: 5 (lower is better) Translates to: SRLYLSWYRRPHLGQ*VPGRCVYLIQSVLI Trigger: GATAAGCACGGACTGAATCAGGTACACGCACCTGCCGGGGACGCACTGACCGAGGTGCGGACGGCGGTACCAGGACAGGTAAAGCCGCGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000424989.1 ENST00000668045.1 |
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| CDS CCA 90 bp | ACCTGTCAAGTTCTTAGGTCCGAGTGTTCGCGGCTTTACCTGTCCTaGTACCGCCGTCCGCACCTCGGTCAGTGCGTCCCCGGCAGGTGC | + |
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Preference number: 5 (lower is better) Translates to: TCQVLRSECSRLYLS*YRRPHLGQCVPGRC Trigger: GCACCTGCCGGGGACGCACTGACCGAGGTGCGGACGGCGGTACCAGGACAGGTAAAGCCGCGAACACTCGGACCTAAGAACTTGACAGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000424989.1 ENST00000668045.1 |
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| CDS CCA 90 bp | TGGGAGGCGGCACACACTCTGCCAGTCCGGACACGGGTTAGGGAGTaGCATCACATTCCGCCGAGTCATTGCCTGCGAAGACTAACGTCA | + |
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Preference number: 5 (lower is better) Translates to: WEAAHTLPVRTRVRE*HHIPPSHCLRRLTS Trigger: TGACGTTAGTCTTCGCAGGCAATGACTCGGCGGAATGTGATGCCACTCCCTAACCCGTGTCCGGACTGGCAGAGTGTGTGCCGCCTCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000424989.1 |
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| CDS GCA 90 bp | GTCCGGACACGGGTTAGGGAGTGGCATCACATTCCGCCGAGTCATTaGCTGCGAAGACTAACGTCACCTCTGATGTCAGGGCTCCAAGGG | + |
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Preference number: 5 (lower is better) Translates to: VRTRVREWHHIPPSH*LRRLTSPLMSGLQG Trigger: CCCTTGGAGCCCTGACATCAGAGGTGACGTTAGTCTTCGCAGGCAATGACTCGGCGGAATGTGATGCCACTCCCTAACCCGTGTCCGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000424989.1 |
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| CDS CCA 90 bp | CCAGGGAGAAGAGCTGGAGGCAAAGGGAGAAGAACGAGGACAAGCTaGGACCCACCAGGCATCTCTTCATCTGTCACTCCATCTGACTGT | + |
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Preference number: 5 (lower is better) Translates to: PGRRAGGKGRRTRTS*DPPGISSSVTPSDC Trigger: ACAGTCAGATGGAGTGACAGATGAAGAGATGCCTGGTGGGTCCCAGCTTGTCCTCGTTCTTCTCCCTTTGCCTCCAGCTCTTCTCCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668045.1 |
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| CDS CCA 90 bp | GGGCAACATGGCGAAACTTCGTCTCTGATTCACTCGATGCGCACCTaGCCGTACGTAGCTTCATCAGGCAGGGTGTACCTGTCAAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: GQHGETSSLIHSMRT*PYVASSGRVYLSSS Trigger: AGAACTTGACAGGTACACCCTGCCTGATGAAGCTACGTACGGCCAGGTGCGCATCGAGTGAATCAGAGACGAAGTTTCGCCATGTTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000424989.1 |
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| CDS CCA 90 bp | GCTTCCTCTTTGCCCAGCTCTAACCTGATTCACTCGATGCGCACCTaGCCGTACGTAGCTTCATCAGGCAGGGTGTACCTGTCAAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: ASSLPSSNLIHSMRT*PYVASSGRVYLSSS Trigger: AGAACTTGACAGGTACACCCTGCCTGATGAAGCTACGTACGGCCAGGTGCGCATCGAGTGAATCAGGTTAGAGCTGGGCAAAGAGGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668045.1 |
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| CDS TCA 90 bp | ATCTCTTCATCTGTCACTCCATCTGACTGTGGCGACCTCAGAGAGTaGTGGCTGATGCTTCTCTCCCACCTTCCAATCCTGAGCAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: ISSSVTPSDCGDLRE*WLMLLSHLPILSSF Trigger: GAAGCTGCTCAGGATTGGAAGGTGGGAGAGAAGCATCAGCCATCACTCTCTGAGGTCGCCACAGTCAGATGGAGTGACAGATGAAGAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668045.1 |
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| CDS GCA 72 bp | AACCCAGGTCCCTGTGGGTGCCTCTGCCCAGCCGCCTaGAGGGTCTGCAGGTGGCCATGTCCCACGTGTCAC | + |
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Preference number: 6 (lower is better) Translates to: NPGPCGCLCPAA*RVCRWPCPTCH Trigger: GTGACACGTGGGACATGGCCACCTGCAGACCCTGCAGGCGGCTGGGCAGAGGCACCCACAGGGACCTGGGTT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000424989.1 |
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| CDS CCA 72 bp | GGGTGCCTCTGCCCAGCCGCCTGCAGGGTCTGCAGGTaGCCATGTCCCACGTGTCACCTTTACAGACCCACG | + |
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Preference number: 6 (lower is better) Translates to: GCLCPAACRVCR*PCPTCHLYRPT Trigger: CGTGGGTCTGTAAAGGTGACACGTGGGACATGGCCACCTGCAGACCCTGCAGGCGGCTGGGCAGAGGCACCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000424989.1 |
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| CDS GCA 72 bp | CGCCGTCCGCACCTCGGTCAGTGCGTCCCCGGCAGGTaGGTGTACCTGATTCAGTCCGTGCTTATCTTGCGC | + |
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Preference number: 6 (lower is better) Translates to: RRPHLGQCVPGR*VYLIQSVLILR Trigger: GCGCAAGATAAGCACGGACTGAATCAGGTACACGCACCTGCCGGGGACGCACTGACCGAGGTGCGGACGGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000424989.1 ENST00000668045.1 |
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| CDS GCA 72 bp | TACCTGTCCTGGTACCGCCGTCCGCACCTCGGTCAGTaGGTCCCCGGCAGGTGCGTGTACCTGATTCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: YLSWYRRPHLGQ*VPGRCVYLIQS Trigger: GGACTGAATCAGGTACACGCACCTGCCGGGGACGCACTGACCGAGGTGCGGACGGCGGTACCAGGACAGGTA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000424989.1 ENST00000668045.1 |
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| CDS GCA 72 bp | GCAGCCAGACCACCTGGTGGGAGGCGGCACACACTCTaGCAGTCCGGACACGGGTTAGGGAGTGGCATCACA | + |
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Preference number: 6 (lower is better) Translates to: AARPPGGRRHTL*QSGHGLGSGIT Trigger: TGTGATGCCACTCCCTAACCCGTGTCCGGACTGGCAGAGTGTGTGCCGCCTCCCACCAGGTGGTCTGGCTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000424989.1 |
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| CDS GCA 72 bp | GCCGGTGCCTCTGCATGGCTCCCACCTCCGTGTGTCTaGAGCCACATGCCTGGTGATGAGCATGAGCCGCCA | + |
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Preference number: 6 (lower is better) Translates to: AGASAWLPPPCV*SHMPGDEHEPP Trigger: TGGCGGCTCATGCTCATCACCAGGCATGTGGCTGCAGACACACGGAGGTGGGAGCCATGCAGAGGCACCGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668045.1 |
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| CDS CAA 90 bp | TGCGTCCCCGGCAGGTGCGTGTACCTGATTCAGTCCGTGCTTATCTaGCGCATACGGGCCGTTCAGTGTCCCGCTCGGAGCTCGTCGCCG | + |
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Preference number: 6 (lower is better) Translates to: CVPGRCVYLIQSVLI*RIRAVQCPARSSSP Trigger: CGGCGACGAGCTCCGAGCGGGACACTGAACGGCCCGTATGCGCAAGATAAGCACGGACTGAATCAGGTACACGCACCTGCCGGGGACGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000424989.1 ENST00000668045.1 |
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| CDS CCA 72 bp | GTTCTTAGGTCCGAGTGTTCGCGGCTTTACCTGTCCTaGTACCGCCGTCCGCACCTCGGTCAGTGCGTCCCC | + |
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Preference number: 6 (lower is better) Translates to: VLRSECSRLYLS*YRRPHLGQCVP Trigger: GGGGACGCACTGACCGAGGTGCGGACGGCGGTACCAGGACAGGTAAAGCCGCGAACACTCGGACCTAAGAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000424989.1 ENST00000668045.1 |
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| CDS TCA 72 bp | ACCTCGGTCAGTGCGTCCCCGGCAGGTGCGTGTACCTaGTTCAGTCCGTGCTTATCTTGCGCATACGGGCCG | + |
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Preference number: 6 (lower is better) Translates to: TSVSASPAGACT*FSPCLSCAYGP Trigger: CGGCCCGTATGCGCAAGATAAGCACGGACTGAATCAGGTACACGCACCTGCCGGGGACGCACTGACCGAGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000424989.1 ENST00000668045.1 |
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| CDS GCA 72 bp | GTGCTGGCAGAGAGGGTTGTGAAGAGCCGGTGCCTCTaGATGGCTCCCACCTCCGTGTGTCTGCAGCCACAT | + |
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Preference number: 6 (lower is better) Translates to: VLAERVVKSRCL*MAPTSVCLQPH Trigger: ATGTGGCTGCAGACACACGGAGGTGGGAGCCATGCAGAGGCACCGGCTCTTCACAACCCTCTCTGCCAGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668045.1 |
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| CDS GCA 72 bp | CTGCATGGCTCCCACCTCCGTGTGTCTGCAGCCACATaGCTGGTGATGAGCATGAGCCGCCATTGGCCAACA | + |
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Preference number: 6 (lower is better) Translates to: LHGSHLRVSAAT*LVMSMSRHWPT Trigger: TGTTGGCCAATGGCGGCTCATGCTCATCACCAGGCATGTGGCTGCAGACACACGGAGGTGGGAGCCATGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668045.1 |
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| CDS CAA 72 bp | GGCAGGTGCGTGTACCTGATTCAGTCCGTGCTTATCTaGCGCATACGGGCCGTTCAGTGTCCCGCTCGGAGC | + |
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Preference number: 6 (lower is better) Translates to: GRCVYLIQSVLI*RIRAVQCPARS Trigger: GCTCCGAGCGGGACACTGAACGGCCCGTATGCGCAAGATAAGCACGGACTGAATCAGGTACACGCACCTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000424989.1 ENST00000668045.1 |
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| CDS CCA 72 bp | GCACACACTCTGCCAGTCCGGACACGGGTTAGGGAGTaGCATCACATTCCGCCGAGTCATTGCCTGCGAAGA | + |
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Preference number: 6 (lower is better) Translates to: AHTLPVRTRVRE*HHIPPSHCLRR Trigger: TCTTCGCAGGCAATGACTCGGCGGAATGTGATGCCACTCCCTAACCCGTGTCCGGACTGGCAGAGTGTGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000424989.1 |
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| CDS CAA 72 bp | TGCAGCCACATGCCTGGTGATGAGCATGAGCCGCCATaGGCCAACAGGGTAGGTAGCCAGGGAGAAGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: CSHMPGDEHEPP*ANRVGSQGEEL Trigger: CAGCTCTTCTCCCTGGCTACCTACCCTGTTGGCCAATGGCGGCTCATGCTCATCACCAGGCATGTGGCTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668045.1 |
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| CDS TCA 72 bp | GAGGGCCCCTGGCGAGTCTCCCGAAGTGTCTCCTTTTaGAAGCTCACCGGTCCTTGTACTCTGAGTGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: EGPWRVSRSVSF*KLTGPCTLSAF Trigger: GAAAGCACTCAGAGTACAAGGACCGGTGAGCTTTCAAAAGGAGACACTTCGGGAGACTCGCCAGGGGCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000424989.1 |
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| CDS GCA 72 bp | CGGGTTAGGGAGTGGCATCACATTCCGCCGAGTCATTaGCTGCGAAGACTAACGTCACCTCTGATGTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: RVREWHHIPPSH*LRRLTSPLMSG Trigger: CCCTGACATCAGAGGTGACGTTAGTCTTCGCAGGCAATGACTCGGCGGAATGTGATGCCACTCCCTAACCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000424989.1 |
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| CDS CCA 72 bp | GGCGAAACTTCGTCTCTGATTCACTCGATGCGCACCTaGCCGTACGTAGCTTCATCAGGCAGGGTGTACCTG | + |
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Preference number: 6 (lower is better) Translates to: GETSSLIHSMRT*PYVASSGRVYL Trigger: CAGGTACACCCTGCCTGATGAAGCTACGTACGGCCAGGTGCGCATCGAGTGAATCAGAGACGAAGTTTCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000424989.1 |
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| CDS CCA 72 bp | TTGCCCAGCTCTAACCTGATTCACTCGATGCGCACCTaGCCGTACGTAGCTTCATCAGGCAGGGTGTACCTG | + |
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Preference number: 6 (lower is better) Translates to: LPSSNLIHSMRT*PYVASSGRVYL Trigger: CAGGTACACCCTGCCTGATGAAGCTACGTACGGCCAGGTGCGCATCGAGTGAATCAGGTTAGAGCTGGGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668045.1 |
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| CDS CCA 72 bp | AGGGAAGCTGCGGAAGCAAAGGTCCAGAAGATCAGATaGAGGCCCAGGGGAGGCACTAACCTGTCACTTGGA | + |
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Preference number: 6 (lower is better) Translates to: REAAEAKVQKIR*RPRGGTNLSLG Trigger: TCCAAGTGACAGGTTAGTGCCTCCCCTGGGCCTCCATCTGATCTTCTGGACCTTTGCTTCCGCAGCTTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668045.1 |
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| CDS TCA 72 bp | TATGAAAGTTACATGCATGATGCGAGAGCCCTCCACTaGCCTCCAAAACTCGCGCTGCCGGGGATACGAGGG | + |
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Preference number: 6 (lower is better) Translates to: YESYMHDARALH*PPKLALPGIRG Trigger: CCCTCGTATCCCCGGCAGCGCGAGTTTTGGAGGTCAGTGGAGGGCTCTCGCATCATGCATGTAACTTTCATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000424989.1 |
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| CDS CCA 72 bp | ACAGACCCACGGCTGAGAGCCGGCCCAGCCTTGGCCTaGCTTCCTTCTTTCTCATCTCTAAAAATGCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: TDPRLRAGPALA*LPSFSSLKMPF Trigger: GAAAGGCATTTTTAGAGATGAGAAAGAAGGAAGCCAGGCCAAGGCTGGGCCGGCTCTCAGCCGTGGGTCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000424989.1 |
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| CDS CAA 72 bp | TCAGATGGAGGCCCAGGGGAGGCACTAACCTGTCACTaGGAGAAGCCAAGCACACCCAACATCAAAGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: SDGGPGEALTCH*EKPSTPNIKGG Trigger: TCCTCCTTTGATGTTGGGTGTGCTTGGCTTCTCCAAGTGACAGGTTAGTGCCTCCCCTGGGCCTCCATCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668045.1 |
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| CDS TCA 72 bp | GAGGTTACACAACTTCCCCCAAGATCGCTGTGGAAATaGCTGGCAGAGCAGGGATTCAAACCCAGGTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: EVTQLPPRSLWK*LAEQGFKPRSL Trigger: CAGGGACCTGGGTTTGAATCCCTGCTCTGCCAGTCATTTCCACAGCGATCTTGGGGGAAGTTGTGTAACCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000424989.1 |
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| CDS GCA 72 bp | GGAATCAGACCTAGAATTTGCATAATTGAGGGAAGCTaGGGAAGCAAAGGTCCAGAAGATCAGATGGAGGCC | + |
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Preference number: 6 (lower is better) Translates to: GIRPRICIIEGS*GSKGPEDQMEA Trigger: GGCCTCCATCTGATCTTCTGGACCTTTGCTTCCGCAGCTTCCCTCAATTATGCAAATTCTAGGTCTGATTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668045.1 |
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| CDS TCA 72 bp | GTGTCTCCTTTTGAAAGCTCACCGGTCCTTGTACTCTaGGTGCTTTCAGTTGGGTCCATTATGAGAAATCTC | + |
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Preference number: 6 (lower is better) Translates to: VSPFESSPVLVL*VLSVGSIMRNL Trigger: GAGATTTCTCATAATGGACCCAACTGAAAGCACTCAGAGTACAAGGACCGGTGAGCTTTCAAAAGGAGACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000424989.1 |
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| CDS GCA 72 bp | CATACAGAGCATTTTCACTGCCCTAAAGATCTTCTATaGTCTACCTACTCATACCTTCCCACCCTTACCCCA | + |
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Preference number: 6 (lower is better) Translates to: HTEHFHCPKDLL*STYSYLPTLTP Trigger: TGGGGTAAGGGTGGGAAGGTATGAGTAGGTAGAGCATAGAAGATCTTTAGGGCAGTGAAAATGCTCTGTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000668045.1 |
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| CDS GCA 72 bp | AACATCATCACCACCCAGAGTCCACAGTCCATAGTTTaGATCATGGTTCTCTCTGGGTATCCCCATTATAGT | + |
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Preference number: 6 (lower is better) Translates to: NIITTQSPQSIV*IMVLSGYPHYS Trigger: ACTATAATGGGGATACCCAGAGAGAACCATGATGCAAACTATGGACTGTGGACTCTGGGTGGTGATGATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000668045.1 |
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| CDS GCA 72 bp | CAGGATGAAGGTAAGTTTTTGAGTATGAAAGTTACATaGATGATGCGAGAGCCCTCCACTGACCTCCAAAAC | + |
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Preference number: 6 (lower is better) Translates to: QDEGKFLSMKVT*MMREPSTDLQN Trigger: GTTTTGGAGGTCAGTGGAGGGCTCTCGCATCATGCATGTAACTTTCATACTCAAAAACTTACCTTCATCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000424989.1 |
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| CDS TCA 72 bp | CTGGAGGTGGATAGTGATGATGTTTATACAACAATGTaGCTGTACCTAATGCCACTGACCTGCACACCTAAA | + |
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Preference number: 6 (lower is better) Translates to: LEVDSDDVYTTM*LYLMPLTCTPK Trigger: TTTAGGTGTGCAGGTCAGTGGCATTAGGTACAGTCACATTGTTGTATAAACATCATCACTATCCACCTCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668045.1 |
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| CDS GCA 72 bp | GATCCAGTATTTATTCTAGGAATCAGACCTAGAATTTaGATAATTGAGGGAAGCTGCGGAAGCAAAGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: DPVFILGIRPRI*IIEGSCGSKGP Trigger: TGGACCTTTGCTTCCGCAGCTTCCCTCAATTATGCAAATTCTAGGTCTGATTCCTAGAATAAATACTGGATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000668045.1 |
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| CDS CAA 72 bp | GTGCTTTCAGTTGGGTCCATTATGAGAAATCTCCTTTaGAGCATGGATGTATTCAAATCCAGATGTTGTCCC | + |
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Preference number: 6 (lower is better) Translates to: VLSVGSIMRNLL*SMDVFKSRCCP Trigger: GGGACAACATCTGGATTTGAATACATCCATGCTCAAAAGGAGATTTCTCATAATGGACCCAACTGAAAGCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000424989.1 |
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