Pregenerated sensors for LINC01136 (Homo sapiens)
Ensembl gene IDs: ENSG00000233791Ensembl transcript IDs: ENST00000425698.1, ENST00000432511.1, ENST00000457348.5
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GCAGGGCTGCTTGCTAACCCCACAGACGGGGCCAGCACAGAGGCCTaGGGAGTGGGACCCACTTCTGCGTGGGAATATGGCCTGAAGAGA | + |
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Preference number: 5 (lower is better) Translates to: AGLLANPTDGASTEA*GVGPTSAWEYGLKR Trigger: TCTCTTCAGGCCATATTCCCACGCAGAAGTGGGTCCCACTCCTCAGGCCTCTGTGCTGGCCCCGTCTGTGGGGTTAGCAAGCAGCCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000425698.1 ENST00000457348.5 |
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| CDS CCA 90 bp | AGTGGGACCCACTTCTGCGTGGGAATATGGCCTGAAGAGAGCAGGTaGGTCAATCCTGAGTCGGCCACACAGGTGGGCTGTGCAAGTGGG | + |
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Preference number: 5 (lower is better) Translates to: SGTHFCVGIWPEESR*VNPESATQVGCASG Trigger: CCCACTTGCACAGCCCACCTGTGTGGCCGACTCAGGATTGACCCACCTGCTCTCTTCAGGCCATATTCCCACGCAGAAGTGGGTCCCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000425698.1 ENST00000432511.1 ENST00000457348.5 |
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| CDS CCA 90 bp | CAGCACAGAGGCCTGAGGAGTGGGACCCACTTCTGCGTGGGAATATaGCCTGAAGAGAGCAGGTGGGTCAATCCTGAGTCGGCCACACAG | + |
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Preference number: 5 (lower is better) Translates to: QHRGLRSGTHFCVGI*PEESRWVNPESATQ Trigger: CTGTGTGGCCGACTCAGGATTGACCCACCTGCTCTCTTCAGGCCATATTCCCACGCAGAAGTGGGTCCCACTCCTCAGGCCTCTGTGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425698.1 ENST00000457348.5 |
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| CDS TCA 90 bp | CAGGGCTTAGAGAGACCCTGGTTCTTTTGGCCACTGGGTGTTTGGTaGGCTCCCATGTTGGTGGCAGCAAGTGAAGCCTGCACCTGCCAC | + |
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Preference number: 5 (lower is better) Translates to: QGLERPWFFWPLGVW*APMLVAASEACTCH Trigger: GTGGCAGGTGCAGGCTTCACTTGCTGCCACCAACATGGGAGCTCACCAAACACCCAGTGGCCAAAAGAACCAGGGTCTCTCTAAGCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457348.5 |
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| CDS CCA 90 bp | GGCCTGAAGAGAGCAGGTGGGTCAATCCTGAGTCGGCCACACAGGTaGGCTGTGCAAGTGGGCGAGATGAGCAACCAGGACTTACAAACA | + |
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Preference number: 5 (lower is better) Translates to: GLKRAGGSILSRPHR*AVQVGEMSNQDLQT Trigger: TGTTTGTAAGTCCTGGTTGCTCATCTCGCCCACTTGCACAGCCCACCTGTGTGGCCGACTCAGGATTGACCCACCTGCTCTCTTCAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425698.1 ENST00000432511.1 |
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| CDS CCA 90 bp | GGCCTGAAGAGAGCAGGTGGGTCAATCCTGAGTCGGCCACACAGGTaGGCTGTGCAAGTGGGCGAGATGAGCAACCAGGACAGAAAACTT | + |
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Preference number: 5 (lower is better) Translates to: GLKRAGGSILSRPHR*AVQVGEMSNQDRKL Trigger: AAGTTTTCTGTCCTGGTTGCTCATCTCGCCCACTTGCACAGCCCACCTGTGTGGCCGACTCAGGATTGACCCACCTGCTCTCTTCAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457348.5 |
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| CDS CCA 90 bp | GTGAATGGTTGGAAAATGCTGTGGGAATCAGAAAGGGGAACCGTCTaGGAGAGGTGGTGTCACCGAAGGCTTCTCGGAGGAGGTGGCCTC | + |
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Preference number: 5 (lower is better) Translates to: VNGWKMLWESERGTV*ERWCHRRLLGGGGL Trigger: GAGGCCACCTCCTCCGAGAAGCCTTCGGTGACACCACCTCTCCCAGACGGTTCCCCTTTCTGATTCCCACAGCATTTTCCAACCATTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000432511.1 ENST00000457348.5 |
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| CDS TCA 90 bp | CACAGCTATTTCTGCTCATCAGCTGGAAATCATGTGGGTAGCCTCTaGGGTCCTGATACCTCCGGGGTTAGATGCCACCTTGGGGAGGGG | + |
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Preference number: 5 (lower is better) Translates to: HSYFCSSAGNHVGSL*GPDTSGVRCHLGEG Trigger: CCCCTCCCCAAGGTGGCATCTAACCCCGGAGGTATCAGGACCTCAGAGGCTACCCACATGATTTCCAGCTGATGAGCAGAAATAGCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000457348.5 |
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| CDS CCA 90 bp | GACCCTGGTTCTTTTGGCCACTGGGTGTTTGGTGAGCTCCCATGTTaGTGGCAGCAAGTGAAGCCTGCACCTGCCACAGCTATTTCTGCT | + |
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Preference number: 5 (lower is better) Translates to: DPGSFGHWVFGELPC*WQQVKPAPATAISA Trigger: AGCAGAAATAGCTGTGGCAGGTGCAGGCTTCACTTGCTGCCACCAACATGGGAGCTCACCAAACACCCAGTGGCCAAAAGAACCAGGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457348.5 |
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| CDS CCA 90 bp | AGTCAAGTTGTCACCAATGAGGTAACGATCCAGTTGCTTCTGAGCTaGAAATGGAGAGCAGGGCTGCTTGCTAACCCCACAGACGGGGCC | + |
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Preference number: 5 (lower is better) Translates to: SQVVTNEVTIQLLLS*KWRAGLLANPTDGA Trigger: GGCCCCGTCTGTGGGGTTAGCAAGCAGCCCTGCTCTCCATTTCCAGCTCAGAAGCAACTGGATCGTTACCTCATTGGTGACAACTTGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000425698.1 ENST00000457348.5 |
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| CDS CCA 90 bp | CCTGGTTCTTTTGGCCACTGGGTGTTTGGTGAGCTCCCATGTTGGTaGCAGCAAGTGAAGCCTGCACCTGCCACAGCTATTTCTGCTCAT | + |
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Preference number: 5 (lower is better) Translates to: PGSFGHWVFGELPCW*QQVKPAPATAISAH Trigger: ATGAGCAGAAATAGCTGTGGCAGGTGCAGGCTTCACTTGCTGCCACCAACATGGGAGCTCACCAAACACCCAGTGGCCAAAAGAACCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457348.5 |
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| CDS CCA 90 bp | ACCACAATGAGGAAGGAAGACGGCGTGAATGGTTGGAAAATGCTGTaGGAATCAGAAAGGGGAACCGTCTGGGAGAGGTGGTGTCACCGA | + |
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Preference number: 5 (lower is better) Translates to: TTMRKEDGVNGWKML*ESERGTVWERWCHR Trigger: TCGGTGACACCACCTCTCCCAGACGGTTCCCCTTTCTGATTCCCACAGCATTTTCCAACCATTCACGCCGTCTTCCTTCCTCATTGTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000432511.1 |
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| CDS CCA 90 bp | GAGAAGGTCCAAACCACAATGAGGAAGGAAGACGGCGTGAATGGTTaGAAAATGCTGTGGGAATCAGAAAGGGGAACCGTCTGGGAGAGG | + |
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Preference number: 5 (lower is better) Translates to: EKVQTTMRKEDGVNG*KMLWESERGTVWER Trigger: CCTCTCCCAGACGGTTCCCCTTTCTGATTCCCACAGCATTTTCCAACCATTCACGCCGTCTTCCTTCCTCATTGTGGTTTGGACCTTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000432511.1 |
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| CDS CCA 90 bp | TCTCGAGAAGGTCCAAACCACAATGAGGAAGGAAGACGGCGTGAATaGTTGGAAAATGCTGTGGGAATCAGAAAGGGGAACCGTCTGGGA | + |
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Preference number: 5 (lower is better) Translates to: SREGPNHNEEGRRRE*LENAVGIRKGNRLG Trigger: TCCCAGACGGTTCCCCTTTCTGATTCCCACAGCATTTTCCAACCATTCACGCCGTCTTCCTTCCTCATTGTGGTTTGGACCTTCTCGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000432511.1 |
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| CDS CCA 90 bp | TTTAGCAGTATTTCCACCCTGATTAGGAAGCAAGGAAGAGGCAGCTaGTCTTCCCCGGGTGATGTTTCTTATCAGCTCTGGGCAGCACAG | + |
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Preference number: 5 (lower is better) Translates to: FSSISTLIRKQGRGS*SSPGDVSYQLWAAQ Trigger: CTGTGCTGCCCAGAGCTGATAAGAAACATCACCCGGGGAAGACCAGCTGCCTCTTCCTTGCTTCCTAATCAGGGTGGAAATACTGCTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000425698.1 ENST00000457348.5 |
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| CDS TCA 90 bp | CCCAGACTGGCTGGCCTAGAACTGACCTTGAAAGGCTCAACTTTGTaGGAAAATGATAGGGAACCCACAAAGATGTCCCGATCATTACCC | + |
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Preference number: 5 (lower is better) Translates to: PRLAGLELTLKGSTL*ENDREPTKMSRSLP Trigger: GGGTAATGATCGGGACATCTTTGTGGGTTCCCTATCATTTTCTCACAAAGTTGAGCCTTTCAAGGTCAGTTCTAGGCCAGCCAGTCTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457348.5 |
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| CDS CCA 90 bp | ATCCCAAACTGTGAAGATGCTCTCCATCCAGGAGTGTCTGAGTCCTaGCTGGAGCAGGCATCTTGTTTAACACATCTTAGACACCCACTT | + |
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Preference number: 5 (lower is better) Translates to: IPNCEDALHPGVSES*LEQASCLTHLRHPL Trigger: AAGTGGGTGTCTAAGATGTGTTAAACAAGATGCCTGCTCCAGCCAGGACTCAGACACTCCTGGATGGAGAGCATCTTCACAGTTTGGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457348.5 |
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| CDS GCA 90 bp | AGTCCTATCTCAAAAAGTGTCCTCAGGGATGTAAAACTTGTTACCTaGAGATTAGAAAGCTGTTTGCTTACTGATATGTTAGCAAGCCTT | + |
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Preference number: 5 (lower is better) Translates to: SPISKSVLRDVKLVT*RLESCLLTDMLASL Trigger: AAGGCTTGCTAACATATCAGTAAGCAAACAGCTTTCTAATCTGCAGGTAACAAGTTTTACATCCCTGAGGACACTTTTTGAGATAGGACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000457348.5 |
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| CDS TCA 72 bp | CTTGCTAACCCCACAGACGGGGCCAGCACAGAGGCCTaGGGAGTGGGACCCACTTCTGCGTGGGAATATGGC | + |
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Preference number: 6 (lower is better) Translates to: LANPTDGASTEA*GVGPTSAWEYG Trigger: GCCATATTCCCACGCAGAAGTGGGTCCCACTCCTCAGGCCTCTGTGCTGGCCCCGTCTGTGGGGTTAGCAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000425698.1 ENST00000457348.5 |
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| CDS CCA 72 bp | CTGTGGGAATCAGAAAGGGGAACCGTCTGGGAGAGGTaGTGTCACCGAAGGCTTCTCGGAGGAGGTGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: LWESERGTVWER*CHRRLLGGGGL Trigger: GAGGCCACCTCCTCCGAGAAGCCTTCGGTGACACCACCTCTCCCAGACGGTTCCCCTTTCTGATTCCCACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000432511.1 ENST00000457348.5 |
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| CDS CCA 72 bp | GGCCTGAGGAGTGGGACCCACTTCTGCGTGGGAATATaGCCTGAAGAGAGCAGGTGGGTCAATCCTGAGTCG | + |
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Preference number: 6 (lower is better) Translates to: GLRSGTHFCVGI*PEESRWVNPES Trigger: CGACTCAGGATTGACCCACCTGCTCTCTTCAGGCCATATTCCCACGCAGAAGTGGGTCCCACTCCTCAGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425698.1 ENST00000457348.5 |
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| CDS CCA 72 bp | CACTTCTGCGTGGGAATATGGCCTGAAGAGAGCAGGTaGGTCAATCCTGAGTCGGCCACACAGGTGGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: HFCVGIWPEESR*VNPESATQVGC Trigger: ACAGCCCACCTGTGTGGCCGACTCAGGATTGACCCACCTGCTCTCTTCAGGCCATATTCCCACGCAGAAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000425698.1 ENST00000432511.1 ENST00000457348.5 |
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| CDS TCA 72 bp | GTCGGCCACACAGGTGGGCTGTGCAAGTGGGCGAGATaGGCAACCAGGACTTACAAACACGGCATCTGTATG | + |
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Preference number: 6 (lower is better) Translates to: VGHTGGLCKWAR*ATRTYKHGICM Trigger: CATACAGATGCCGTGTTTGTAAGTCCTGGTTGCTCATCTCGCCCACTTGCACAGCCCACCTGTGTGGCCGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000425698.1 ENST00000432511.1 |
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| CDS CCA 72 bp | TCTTTTGGCCACTGGGTGTTTGGTGAGCTCCCATGTTaGTGGCAGCAAGTGAAGCCTGCACCTGCCACAGCT | + |
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Preference number: 6 (lower is better) Translates to: SFGHWVFGELPC*WQQVKPAPATA Trigger: AGCTGTGGCAGGTGCAGGCTTCACTTGCTGCCACCAACATGGGAGCTCACCAAACACCCAGTGGCCAAAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457348.5 |
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| CDS TCA 72 bp | AGACATCTACCGAGTGCCTGTGATGGTGGCGGTCCCTaGGTGTGGAAGAGGGAGACTGAGGCCAGATTCTTT | + |
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Preference number: 6 (lower is better) Translates to: RHLPSACDGGGP*VWKRETEARFF Trigger: AAAGAATCTGGCCTCAGTCTCCCTCTTCCACACTCAGGGACCGCCACCATCACAGGCACTCGGTAGATGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432511.1 |
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| CDS GCA 72 bp | GATGAGCAACCAGGACTTACAAACACGGCATCTGTATaGCAGACCCTGGGCCAGGCTTCACGGTGTTGGGTA | + |
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Preference number: 6 (lower is better) Translates to: DEQPGLTNTASV*QTLGQASRCWV Trigger: TACCCAACACCGTGAAGCCTGGCCCAGGGTCTGGCATACAGATGCCGTGTTTGTAAGTCCTGGTTGCTCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432511.1 |
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| CDS TCA 72 bp | TTCTGCTCATCAGCTGGAAATCATGTGGGTAGCCTCTaGGGTCCTGATACCTCCGGGGTTAGATGCCACCTT | + |
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Preference number: 6 (lower is better) Translates to: FCSSAGNHVGSL*GPDTSGVRCHL Trigger: AAGGTGGCATCTAACCCCGGAGGTATCAGGACCTCAGAGGCTACCCACATGATTTCCAGCTGATGAGCAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457348.5 |
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| CDS TCA 72 bp | TTGAGTAAATTGAGAAGAAATCCAGGGGCTGCACTGTaGAGAACGACGGCCCTCCCAAGCACCCAAGCTTGC | + |
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Preference number: 6 (lower is better) Translates to: LSKLRRNPGAAL*RTTALPSTQAC Trigger: GCAAGCTTGGGTGCTTGGGAGGGCCGTCGTTCTTCACAGTGCAGCCCCTGGATTTCTTCTCAATTTACTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457348.5 |
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| CDS CCA 72 bp | TCTGTATGCCAGACCCTGGGCCAGGCTTCACGGTGTTaGGTAGAAGTTATCCTCATTCAGCAGACATCTACC | + |
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Preference number: 6 (lower is better) Translates to: SVCQTLGQASRC*VEVILIQQTST Trigger: GGTAGATGTCTGCTGAATGAGGATAACTTCTACCCAACACCGTGAAGCCTGGCCCAGGGTCTGGCATACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432511.1 |
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| CDS CCA 72 bp | GTCACCAATGAGGTAACGATCCAGTTGCTTCTGAGCTaGAAATGGAGAGCAGGGCTGCTTGCTAACCCCACA | + |
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Preference number: 6 (lower is better) Translates to: VTNEVTIQLLLS*KWRAGLLANPT Trigger: TGTGGGGTTAGCAAGCAGCCCTGCTCTCCATTTCCAGCTCAGAAGCAACTGGATCGTTACCTCATTGGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000425698.1 ENST00000457348.5 |
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| CDS CAA 90 bp | CGAGAAGGTCCAAACCACAATGAGGAAGGAAGACGGCGTGAATGGTaGGAAAATGCTGTGGGAATCAGAAAGGGGAACCGTCTGGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: REGPNHNEEGRRREW*ENAVGIRKGNRLGE Trigger: CTCTCCCAGACGGTTCCCCTTTCTGATTCCCACAGCATTTTCCAACCATTCACGCCGTCTTCCTTCCTCATTGTGGTTTGGACCTTCTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000432511.1 |
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| CDS CCA 72 bp | ATTTCCACCCTGATTAGGAAGCAAGGAAGAGGCAGCTaGTCTTCCCCGGGTGATGTTTCTTATCAGCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: ISTLIRKQGRGS*SSPGDVSYQLW Trigger: CCAGAGCTGATAAGAAACATCACCCGGGGAAGACCAGCTGCCTCTTCCTTGCTTCCTAATCAGGGTGGAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000425698.1 ENST00000457348.5 |
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| CDS CAA 72 bp | ATCTGTATGCCAGACCCTGGGCCAGGCTTCACGGTGTaGGGTAGAAGTTATCCTCATTCAGCAGACATCTAC | + |
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Preference number: 6 (lower is better) Translates to: ICMPDPGPGFTV*GRSYPHSADIY Trigger: GTAGATGTCTGCTGAATGAGGATAACTTCTACCCAACACCGTGAAGCCTGGCCCAGGGTCTGGCATACAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000432511.1 |
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| CDS CCA 72 bp | CAAACCACAATGAGGAAGGAAGACGGCGTGAATGGTTaGAAAATGCTGTGGGAATCAGAAAGGGGAACCGTC | + |
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Preference number: 6 (lower is better) Translates to: QTTMRKEDGVNG*KMLWESERGTV Trigger: GACGGTTCCCCTTTCTGATTCCCACAGCATTTTCCAACCATTCACGCCGTCTTCCTTCCTCATTGTGGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000432511.1 |
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| CDS CCA 72 bp | GGTCCAAACCACAATGAGGAAGGAAGACGGCGTGAATaGTTGGAAAATGCTGTGGGAATCAGAAAGGGGAAC | + |
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Preference number: 6 (lower is better) Translates to: GPNHNEEGRRRE*LENAVGIRKGN Trigger: GTTCCCCTTTCTGATTCCCACAGCATTTTCCAACCATTCACGCCGTCTTCCTTCCTCATTGTGGTTTGGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000432511.1 |
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| CDS CCA 72 bp | TGTGAAGATGCTCTCCATCCAGGAGTGTCTGAGTCCTaGCTGGAGCAGGCATCTTGTTTAACACATCTTAGA | + |
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Preference number: 6 (lower is better) Translates to: CEDALHPGVSES*LEQASCLTHLR Trigger: TCTAAGATGTGTTAAACAAGATGCCTGCTCCAGCCAGGACTCAGACACTCCTGGATGGAGAGCATCTTCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457348.5 |
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| CDS CAA 72 bp | GCTAGAGGACATACCCCCTGTCTTAGGGGCCAGTCATaGCCAAATAGAAGTGTGGGATCAGTGTTAACAGAT | + |
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Preference number: 6 (lower is better) Translates to: ARGHTPCLRGQS*PNRSVGSVLTD Trigger: ATCTGTTAACACTGATCCCACACTTCTATTTGGCAATGACTGGCCCCTAAGACAGGGGGTATGTCCTCTAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000457348.5 |
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| CDS TCA 72 bp | GCTGGCCTAGAACTGACCTTGAAAGGCTCAACTTTGTaGGAAAATGATAGGGAACCCACAAAGATGTCCCGA | + |
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Preference number: 6 (lower is better) Translates to: AGLELTLKGSTL*ENDREPTKMSR Trigger: TCGGGACATCTTTGTGGGTTCCCTATCATTTTCTCACAAAGTTGAGCCTTTCAAGGTCAGTTCTAGGCCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457348.5 |
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| CDS CCA 72 bp | TCTCTTCTGATTCTAAAGAATGACTCCCAGACTGGCTaGCCTAGAACTGACCTTGAAAGGCTCAACTTTGTG | + |
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Preference number: 6 (lower is better) Translates to: SLLILKNDSQTG*PRTDLERLNFV Trigger: CACAAAGTTGAGCCTTTCAAGGTCAGTTCTAGGCCAGCCAGTCTGGGAGTCATTCTTTAGAATCAGAAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457348.5 |
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| CDS TCA 72 bp | ACTTGTTACCTGCAGATTAGAAAGCTGTTTGCTTACTaGTATGTTAGCAAGCCTTCCTTCGGTCTAGATGGG | + |
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Preference number: 6 (lower is better) Translates to: TCYLQIRKLFAY*YVSKPSFGLDG Trigger: CCCATCTAGACCGAAGGAAGGCTTGCTAACATATCAGTAAGCAAACAGCTTTCTAATCTGCAGGTAACAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457348.5 |
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| CDS GCA 72 bp | GGAACCCACAAAGATGTCCCGATCATTACCCAACGATaGTTGCAAAGAGTTGTGATATATTTAGCAGTATTT | + |
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Preference number: 6 (lower is better) Translates to: GTHKDVPIITQR*LQRVVIYLAVF Trigger: AAATACTGCTAAATATATCACAACTCTTTGCAAGCATCGTTGGGTAATGATCGGGACATCTTTGTGGGTTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457348.5 |
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| CDS CAA 72 bp | GATGTAAAACTTGTTACCTGCAGATTAGAAAGCTGTTaGCTTACTGATATGTTAGCAAGCCTTCCTTCGGTC | + |
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Preference number: 6 (lower is better) Translates to: DVKLVTCRLESC*LTDMLASLPSV Trigger: GACCGAAGGAAGGCTTGCTAACATATCAGTAAGCAAACAGCTTTCTAATCTGCAGGTAACAAGTTTTACATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000457348.5 |
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