Pregenerated sensors for LINC01135 (Homo sapiens)
Ensembl gene IDs: ENSG00000234807Ensembl transcript IDs: ENST00000419531.3, ENST00000649834.1, ENST00000653297.1, ENST00000663144.1, ENST00000669294.1
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CTGCGAGAGGGCTGGGGCGTGGCGGGCTCCGAGCCTCCCGAGGCCTaGGTAGCGGCCGTAGCACCAGTTCCCGCCTCCCCCGCGGCCCGG | + |
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Preference number: 5 (lower is better) Translates to: LREGWGVAGSEPPEA*VAAVAPVPASPAAR Trigger: CCGGGCCGCGGGGGAGGCGGGAACTGGTGCTACGGCCGCTACGCAGGCCTCGGGAGGCTCGGAGCCCGCCACGCCCCAGCCCTCTCGCAG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000669294.1 |
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| CDS GCA 90 bp | CACCAGTTCCCGCCTCCCCCGCGGCCCGGCGCTGCGGGCGGGACCTaGGGCGACCTGTGGGCGGAAGTCTGTGGCTTTATTTACACAGAG | + |
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Preference number: 5 (lower is better) Translates to: HQFPPPPRPGAAGGT*GDLWAEVCGFIYTE Trigger: CTCTGTGTAAATAAAGCCACAGACTTCCGCCCACAGGTCGCCGCAGGTCCCGCCCGCAGCGCCGGGCCGCGGGGGAGGCGGGAACTGGTG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669294.1 |
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| CDS CCA 90 bp | CACAGAGGGCAGCCCGTGGAGGCTAGCCTTGTAAGGACGAATCGCTaGCGGGCCTGTGGGGGAGGCCAGGAAAGGCGGCCTTCGCCTGAT | + |
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Preference number: 5 (lower is better) Translates to: HRGQPVEASLVRTNR*RACGGGQERRPSPD Trigger: ATCAGGCGAAGGCCGCCTTTCCTGGCCTCCCCCACAGGCCCGCCAGCGATTCGTCCTTACAAGGCTAGCCTCCACGGGCTGCCCTCTGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000669294.1 |
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| CDS CCA 90 bp | TCCCTCCAGAGAGCCACACGTGACCGGAGGATTCCTCCTCTGGCCTaGAGCCGGCTGATAAGGGCAGTCCATCTGCTGGGGGCTCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: SLQRATRDRRIPPLA*SRLIRAVHLLGAPR Trigger: CCTGGGAGCCCCCAGCAGATGGACTGCCCTTATCAGCCGGCTCCAGGCCAGAGGAGGAATCCTCCGGTCACGTGTGGCTCTCTGGAGGGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000419531.3 ENST00000649834.1 ENST00000663144.1 |
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| CDS CCA 90 bp | TCTGCTGGGGGCTCCCAGGACCAGCAGAAACAGGAACCAAGCTGGTaGAAGGGAGCAGGGGAGACTGCCAGGCCTGGCTGCAGCTTCCTC | + |
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Preference number: 5 (lower is better) Translates to: SAGGSQDQQKQEPSW*KGAGETARPGCSFL Trigger: GAGGAAGCTGCAGCCAGGCCTGGCAGTCTCCCCTGCTCCCTTCCACCAGCTTGGTTCCTGTTTCTGCTGGTCCTGGGAGCCCCCAGCAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000419531.3 ENST00000649834.1 ENST00000663144.1 |
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| CDS TCA 90 bp | CTACCCAGGATATGCGCCCACCACCCGGCCGGGAGTGCAGAGATTTaGAGTCCAGGTTCTACCCCGGGCTCCGAGTACTACTGCGTGACT | + |
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Preference number: 5 (lower is better) Translates to: LPRICAHHPAGSAEI*SPGSTPGSEYYCVT Trigger: AGTCACGCAGTAGTACTCGGAGCCCGGGGTAGAACCTGGACTTCAAATCTCTGCACTCCCGGCCGGGTGGTGGGCGCATATCCTGGGTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000419531.3 ENST00000649834.1 ENST00000653297.1 ENST00000663144.1 ENST00000669294.1 |
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| CDS TCA 90 bp | CTTCGCCAGGCAGGAACGATGGCTCGCCCGGGGCATGGAGCTCAGTaGTGGGCACAAAGCAAGACTCATGGAGGAGGATGTGTTTGGCAG | + |
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Preference number: 5 (lower is better) Translates to: LRQAGTMARPGHGAQ*WAQSKTHGGGCVWQ Trigger: CTGCCAAACACATCCTCCTCCATGAGTCTTGCTTTGTGCCCATCACTGAGCTCCATGCCCCGGGCGAGCCATCGTTCCTGCCTGGCGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000419531.3 ENST00000649834.1 ENST00000663144.1 |
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| CDS GCA 90 bp | TTCCTAGAGGCTACCCAGGATATGCGCCCACCACCCGGCCGGGAGTaGAGAGATTTGAAGTCCAGGTTCTACCCCGGGCTCCGAGTACTA | + |
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Preference number: 5 (lower is better) Translates to: FLEATQDMRPPPGRE*RDLKSRFYPGLRVL Trigger: TAGTACTCGGAGCCCGGGGTAGAACCTGGACTTCAAATCTCTGCACTCCCGGCCGGGTGGTGGGCGCATATCCTGGGTAGCCTCTAGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000419531.3 ENST00000649834.1 ENST00000653297.1 ENST00000663144.1 ENST00000669294.1 |
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| CDS CCA 90 bp | TGTTCACACTGGCACAGGTCCCAGGGCGTGAGCCCCTGTGGAGGCTaGGTCTCTCCCTTTCCATTTCCCTTGTTGACTTCCAGCGCGACT | + |
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Preference number: 5 (lower is better) Translates to: CSHWHRSQGVSPCGG*VSPFPFPLLTSSAT Trigger: AGTCGCGCTGGAAGTCAACAAGGGAAATGGAAAGGGAGAGACCCAGCCTCCACAGGGGCTCACGCCCTGGGACCTGTGCCAGTGTGAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419531.3 ENST00000663144.1 |
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| CDS CCA 90 bp | TCGGGCTGCTGTCTCTCTAGGGCCTACCATGTTCTGAGTGATCAGTaGAGAAGGGTGCTCATGGGTGGGGACTCCGACGGTCTGAGCCTG | + |
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Preference number: 5 (lower is better) Translates to: SGCCLSRAYHVLSDQ*RRVLMGGDSDGLSL Trigger: CAGGCTCAGACCGTCGGAGTCCCCACCCATGAGCACCCTTCTCCACTGATCACTCAGAACATGGTAGGCCCTAGAGAGACAGCAGCCCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669294.1 |
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| CDS CCA 90 bp | TCTTTGGCTTGTATGGCTGAGAGGCAGACGCAGAAAGAGCGTGAGTaGAAGAGCCCAATCTGGGGCCAGCCTGGGGTCACACAACAGCCC | + |
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Preference number: 5 (lower is better) Translates to: SLACMAERQTQKERE*KSPIWGQPGVTQQP Trigger: GGGCTGTTGTGTGACCCCAGGCTGGCCCCAGATTGGGCTCTTCCACTCACGCTCTTTCTGCGTCTGCCTCTCAGCCATACAAGCCAAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653297.1 |
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| CDS TCA 90 bp | CCAGCGCGACTGTTGTTAGCTCGCAGATGGACAGGCAGTGCTCCATaGCTTGCCAGCTGCCAGGCTGAATCTGCCTTGGTTCCATGTGTC | + |
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Preference number: 5 (lower is better) Translates to: PARLLLARRWTGSAP*LASCQAESALVPCV Trigger: GACACATGGAACCAAGGCAGATTCAGCCTGGCAGCTGGCAAGTCATGGAGCACTGCCTGTCCATCTGCGAGCTAACAACAGTCGCGCTGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419531.3 ENST00000663144.1 |
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| CDS TCA 90 bp | GCTGTATGTATTTATGAGGTCTCTCTCCCTCCAGAGAGCCACACGTaGCCGGAGGATTCCTCCTCTGGCCTGGAGCCGGCTGATAAGGGC | + |
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Preference number: 5 (lower is better) Translates to: AVCIYEVSLPPESHT*PEDSSSGLEPADKG Trigger: GCCCTTATCAGCCGGCTCCAGGCCAGAGGAGGAATCCTCCGGTCACGTGTGGCTCTCTGGAGGGAGAGAGACCTCATAAATACATACAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000419531.3 ENST00000649834.1 ENST00000663144.1 |
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| CDS TCA 90 bp | CTAGAACCGGAAAACCTTGTTCACACTGGCACAGGTCCCAGGGCGTaGGCCCCTGTGGAGGCTGGGTCTCTCCCTTTCCATTTCCCTTGT | + |
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Preference number: 5 (lower is better) Translates to: LEPENLVHTGTGPRA*APVEAGSLPFHFPC Trigger: ACAAGGGAAATGGAAAGGGAGAGACCCAGCCTCCACAGGGGCTCACGCCCTGGGACCTGTGCCAGTGTGAACAAGGTTTTCCGGTTCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663144.1 |
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| CDS TCA 90 bp | TCTGGGAAGATTCGGGCTGCTGTCTCTCTAGGGCCTACCATGTTCTaGGTGATCAGTGGAGAAGGGTGCTCATGGGTGGGGACTCCGACG | + |
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Preference number: 5 (lower is better) Translates to: SGKIRAAVSLGPTMF*VISGEGCSWVGTPT Trigger: CGTCGGAGTCCCCACCCATGAGCACCCTTCTCCACTGATCACTCAGAACATGGTAGGCCCTAGAGAGACAGCAGCCCGAATCTTCCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669294.1 |
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| CDS GCA 90 bp | AGTCCAGGTTCTACCCCGGGCTCCGAGTACTACTGCGTGACTTTATaGGAGTGTCCGCCGCCTTCTGGGCTTGTTTTCCCGGAAGCAACT | + |
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Preference number: 5 (lower is better) Translates to: SPGSTPGSEYYCVTL*ECPPPSGLVFPEAT Trigger: AGTTGCTTCCGGGAAAACAAGCCCAGAAGGCGGCGGACACTCGCATAAAGTCACGCAGTAGTACTCGGAGCCCGGGGTAGAACCTGGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000649834.1 ENST00000653297.1 ENST00000663144.1 |
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| CDS TCA 90 bp | AGATTTGAAGTCCAGGTTCTACCCCGGGCTCCGAGTACTACTGCGTaGCTTTATGCGAGTGTCCGCCGCCTTCTGGGCTTGTTTTCCCGG | + |
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Preference number: 5 (lower is better) Translates to: RFEVQVLPRAPSTTA*LYASVRRLLGLFSR Trigger: CCGGGAAAACAAGCCCAGAAGGCGGCGGACACTCGCATAAAGTCACGCAGTAGTACTCGGAGCCCGGGGTAGAACCTGGACTTCAAATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000419531.3 ENST00000649834.1 ENST00000653297.1 ENST00000663144.1 |
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| CDS GCA 90 bp | ACTCAGAAGATAGTGCCCTCTTCTAACTCCCACAGAGGTGTTCTTTaGTGCCAACCCCAGTGGCTGGTCCAGGGGCAGGCCCATATGCCA | + |
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Preference number: 5 (lower is better) Translates to: TQKIVPSSNSHRGVL*CQPQWLVQGQAHMP Trigger: TGGCATATGGGCCTGCCCCTGGACCAGCCACTGGGGTTGGCAGCAAAGAACACCTCTGTGGGAGTTAGAAGAGGGCACTATCTTCTGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653297.1 |
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| CDS CCA 90 bp | CTCAGGCTCCTCAGTGATGAAATGAGAGTACTTAGGCCTGCTTCCTaGGGCCGGAAAACCTTGTTCACACTGGCACAGGTCCCAGGGCGT | + |
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Preference number: 5 (lower is better) Translates to: LRLLSDEMRVLRPAS*GRKTLFTLAQVPGR Trigger: ACGCCCTGGGACCTGTGCCAGTGTGAACAAGGTTTTCCGGCCCCAGGAAGCAGGCCTAAGTACTCTCATTTCATCACTGAGGAGCCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419531.3 |
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| CDS GCA 90 bp | CCCAGCCCCACATCCACTGCCAGCCAGGTCCGCCATGTACAGTTGTaGAGGTTATGCCCTGTAGAAGCTTGTCTGGCAGGGATAATAAGT | + |
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Preference number: 5 (lower is better) Translates to: PSPTSTASQVRHVQL*RLCPVEACLAGIIS Trigger: ACTTATTATCCCTGCCAGACAAGCTTCTACAGGGCATAACCTGCACAACTGTACATGGCGGACCTGGCTGGCAGTGGATGTGGGGCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653297.1 |
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| CDS CCA 90 bp | CATGCCCACCCAGAACTCCCCAAATCTCCTTCTTACTCTGGGGTTTaGAAGAGGCTGAAATGTGGGTACTCAGGGCCCTGGAAGCTGGCA | + |
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Preference number: 5 (lower is better) Translates to: HAHPELPKSPSYSGV*KRLKCGYSGPWKLA Trigger: TGCCAGCTTCCAGGGCCCTGAGTACCCACATTTCAGCCTCTTCCAAACCCCAGAGTAAGAAGGAGATTTGGGGAGTTCTGGGTGGGCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000419531.3 ENST00000649834.1 ENST00000663144.1 |
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| CDS GCA 90 bp | AATAAGTGGGGACTGGAATCCAGCCTGTGCTCTGCAGGGCAAGCTTaGACCTGTGGAGGTGCAGACACTCAGAAGATAGTGCCCTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: NKWGLESSLCSAGQA*TCGGADTQKIVPSS Trigger: AGAAGAGGGCACTATCTTCTGAGTGTCTGCACCTCCACAGGTGCAAGCTTGCCCTGCAGAGCACAGGCTGGATTCCAGTCCCCACTTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653297.1 |
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| CDS GCA 90 bp | ACATCCACTGCCAGCCAGGTCCGCCATGTACAGTTGTGCAGGTTATaGCCTGTAGAAGCTTGTCTGGCAGGGATAATAAGTGGGGACTGG | + |
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Preference number: 5 (lower is better) Translates to: TSTASQVRHVQLCRL*PVEACLAGIISGDW Trigger: CCAGTCCCCACTTATTATCCCTGCCAGACAAGCTTCTACAGGGCATAACCTGCACAACTGTACATGGCGGACCTGGCTGGCAGTGGATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653297.1 |
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| CDS GCA 90 bp | CCGAGCCTCAGCCTCCCTTCTATAAAATGGGAAGAAGGAATCTCCTaGAGGGTTTCTGGGAAGATTCGGGCTGCTGTCTCTCTAGGGCCT | + |
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Preference number: 5 (lower is better) Translates to: PSLSLPSIKWEEGIS*RVSGKIRAAVSLGP Trigger: AGGCCCTAGAGAGACAGCAGCCCGAATCTTCCCAGAAACCCTGCAGGAGATTCCTTCTTCCCATTTTATAGAAGGGAGGCTGAGGCTCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669294.1 |
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| CDS CCA 90 bp | TGCACAATTCTGTTGAGATTCATCCCTTCAACCTTCCCTCCTTATTaGATTGTGGACTTCGCCAGGCAGGAACGATGGCTCGCCCGGGGC | + |
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Preference number: 5 (lower is better) Translates to: CTILLRFIPSTFPPY*IVDFARQERWLARG Trigger: GCCCCGGGCGAGCCATCGTTCCTGCCTGGCGAAGTCCACAATCCAATAAGGAGGGAAGGTTGAAGGGATGAATCTCAACAGAATTGTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000419531.3 ENST00000649834.1 ENST00000663144.1 |
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| CDS CCA 90 bp | CCCATCACATGCCCACCCAGAACTCCCCAAATCTCCTTCTTACTCTaGGGTTTGGAAGAGGCTGAAATGTGGGTACTCAGGGCCCTGGAA | + |
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Preference number: 5 (lower is better) Translates to: PITCPPRTPQISFLL*GLEEAEMWVLRALE Trigger: TTCCAGGGCCCTGAGTACCCACATTTCAGCCTCTTCCAAACCCCAGAGTAAGAAGGAGATTTGGGGAGTTCTGGGTGGGCATGTGATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000419531.3 ENST00000649834.1 ENST00000663144.1 |
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| CDS GCA 90 bp | GGGAGAATATATGTGGCTTTCAGGCTGGACTCGGTCACTTGTAGCTaGGTAGCCAGCAGTCAGTCAGTTACAATCGCAGCCTCAGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: GRIYVAFRLDSVTCS*VASSQSVTIAASAS Trigger: GGAAGCTGAGGCTGCGATTGTAACTGACTGACTGCTGGCTACGCAGCTACAAGTGACCGAGTCCAGCCTGAAAGCCACATATATTCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000419531.3 ENST00000649834.1 ENST00000663144.1 |
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| CDS TCA 90 bp | GGTCACACAACAGCCCTACCAGGTAACTGTGTGTATGACCCTGACTaGGTCGGCTACTCTCTCAGAGCCTCAGTTTCCTCAGTTTCAGCA | + |
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Preference number: 5 (lower is better) Translates to: GHTTALPGNCVYDPD*VGYSLRASVSSVSA Trigger: TGCTGAAACTGAGGAAACTGAGGCTCTGAGAGAGTAGCCGACTCAGTCAGGGTCATACACACAGTTACCTGGTAGGGCTGTTGTGTGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653297.1 |
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| CDS GCA 90 bp | ATGGGAAGAAGGAATCTCCTGCAGGGTTTCTGGGAAGATTCGGGCTaGTGTCTCTCTAGGGCCTACCATGTTCTGAGTGATCAGTGGAGA | + |
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Preference number: 5 (lower is better) Translates to: MGRRNLLQGFWEDSG*CLSRAYHVLSDQWR Trigger: TCTCCACTGATCACTCAGAACATGGTAGGCCCTAGAGAGACAGCAGCCCGAATCTTCCCAGAAACCCTGCAGGAGATTCCTTCTTCCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669294.1 |
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| CDS CCA 90 bp | ATCATGCCTCAGCTTCATTCGTGGGCTGGGAACACAGTGTTTCTTTaGCTTGTATGGCTGAGAGGCAGACGCAGAAAGAGCGTGAGTGGA | + |
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Preference number: 5 (lower is better) Translates to: IMPQLHSWAGNTVFL*LVWLRGRRRKSVSG Trigger: TCCACTCACGCTCTTTCTGCGTCTGCCTCTCAGCCATACAAGCCAAAGAAACACTGTGTTCCCAGCCCACGAATGAAGCTGAGGCATGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653297.1 |
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| CDS TCA 90 bp | AACCTTCAGAGCCTCTCTTTCTGCTGCTGTAAACCAAGGAGGGCTTaGATGGTGAGGGCTGTCCAATCAATGACTGAACGTCTCAGGCTC | + |
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Preference number: 5 (lower is better) Translates to: NLQSLSFCCCKPRRA*MVRAVQSMTERLRL Trigger: GAGCCTGAGACGTTCAGTCATTGATTGGACAGCCCTCACCATTCAAGCCCTCCTTGGTTTACAGCAGCAGAAAGAGAGGCTCTGAAGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419531.3 ENST00000649834.1 |
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| CDS CCA 90 bp | AGTTCCATAAGCCTTGTCCATCATGCCTCAGCTTCATTCGTGGGCTaGGAACACAGTGTTTCTTTGGCTTGTATGGCTGAGAGGCAGACG | + |
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Preference number: 5 (lower is better) Translates to: SSISLVHHASASFVG*EHSVSLACMAERQT Trigger: CGTCTGCCTCTCAGCCATACAAGCCAAAGAAACACTGTGTTCCCAGCCCACGAATGAAGCTGAGGCATGATGGACAAGGCTTATGGAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653297.1 |
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| CDS CCA 90 bp | GCTGTCAGAATCAGAGCACCCCGTTCCAGCCAACTCTGCCATTCCTaGGGCTTGGTAGTTTGGTTTCTCCATCAGTTCTTTGATTTTCCC | + |
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Preference number: 5 (lower is better) Translates to: AVRIRAPRSSQLCHS*GLVVWFLHQFFDFP Trigger: GGGAAAATCAAAGAACTGATGGAGAAACCAAACTACCAAGCCCCAGGAATGGCAGAGTTGGCTGGAACGGGGTGCTCTGATTCTGACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653297.1 |
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| CDS CCA 90 bp | CCTCCCTTCTATAAAATGGGAAGAAGGAATCTCCTGCAGGGTTTCTaGGAAGATTCGGGCTGCTGTCTCTCTAGGGCCTACCATGTTCTG | + |
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Preference number: 5 (lower is better) Translates to: PPFYKMGRRNLLQGF*EDSGCCLSRAYHVL Trigger: CAGAACATGGTAGGCCCTAGAGAGACAGCAGCCCGAATCTTCCCAGAAACCCTGCAGGAGATTCCTTCTTCCCATTTTATAGAAGGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669294.1 |
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| CDS CCA 90 bp | TCAAGCCATTTCAACGTGCCGAGCCTCAGCCTCCCTTCTATAAAATaGGAAGAAGGAATCTCCTGCAGGGTTTCTGGGAAGATTCGGGCT | + |
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Preference number: 5 (lower is better) Translates to: SSHFNVPSLSLPSIK*EEGISCRVSGKIRA Trigger: AGCCCGAATCTTCCCAGAAACCCTGCAGGAGATTCCTTCTTCCCATTTTATAGAAGGGAGGCTGAGGCTCGGCACGTTGAAATGGCTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669294.1 |
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| CDS GCA 90 bp | CTCTCTGGAGGGTTCTGTGAGACTTCACTGAGCCAGGAGATAAAGTaGTCTGTAAACTGTGAAAGGTCAGTCCTGGGCAAAGGATTAGGC | + |
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Preference number: 5 (lower is better) Translates to: LSGGFCETSLSQEIK*SVNCERSVLGKGLG Trigger: GCCTAATCCTTTGCCCAGGACTGACCTTTCACAGTTTACAGAGCACTTTATCTCCTGGCTCAGTGAAGTCTCACAGAACCCTCCAGAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000419531.3 ENST00000649834.1 ENST00000663144.1 |
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| CDS CCA 90 bp | TACTCTGGGGTTTGGAAGAGGCTGAAATGTGGGTACTCAGGGCCCTaGAAGCTGGCAAGTATTTGGCAGTTCAGTTCAAAGAGGAAATCC | + |
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Preference number: 5 (lower is better) Translates to: YSGVWKRLKCGYSGP*KLASIWQFSSKRKS Trigger: GGATTTCCTCTTTGAACTGAACTGCCAAATACTTGCCAGCTTCCAGGGCCCTGAGTACCCACATTTCAGCCTCTTCCAAACCCCAGAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000419531.3 ENST00000649834.1 ENST00000663144.1 |
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| CDS TCA 90 bp | CTCCACTCTGACCACGTGTCCACATGGAAAGTGAGATCATTTGCATaGCCCTGCCTTTCTAACAGTAGTAATTGGCCAGGTGTAGACATC | + |
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Preference number: 5 (lower is better) Translates to: LHSDHVSTWKVRSFA*PCLSNSSNWPGVDI Trigger: GATGTCTACACCTGGCCAATTACTACTGTTAGAAAGGCAGGGTCATGCAAATGATCTCACTTTCCATGTGGACACGTGGTCAGAGTGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653297.1 |
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| CDS TCA 90 bp | TTTTCCAAACCTCCCTCCACTCTGACCACGTGTCCACATGGAAAGTaGGATCATTTGCATGACCCTGCCTTTCTAACAGTAGTAATTGGC | + |
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Preference number: 5 (lower is better) Translates to: FSKPPSTLTTCPHGK*DHLHDPAFLTVVIG Trigger: GCCAATTACTACTGTTAGAAAGGCAGGGTCATGCAAATGATCTCACTTTCCATGTGGACACGTGGTCAGAGTGGAGGGAGGTTTGGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653297.1 |
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| CDS TCA 90 bp | GATAGTAAGCATGTCTACCACCCTAAAAGGTTCCTTGTGCTTCTCTaGATCCTTTCCTTCTGCCTCACTTCCCCAAACAACCATGGATCT | + |
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Preference number: 5 (lower is better) Translates to: DSKHVYHPKRFLVLL*ILSFCLTSPNNHGS Trigger: AGATCCATGGTTGTTTGGGGAAGTGAGGCAGAAGGAAAGGATTCAGAGAAGCACAAGGAACCTTTTAGGGTGGTAGACATGCTTACTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000419531.3 ENST00000649834.1 ENST00000663144.1 |
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| CDS CCA 90 bp | GTGGATTTGAGATTCCTCATAGAAATAGCCAATAAGGACTATGCCTaGTGGACTTTAATCCTGGCCCAGTCGCCAGAATGTCAAGGTTTC | + |
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Preference number: 5 (lower is better) Translates to: VDLRFLIEIANKDYA*WTLILAQSPECQGF Trigger: GAAACCTTGACATTCTGGCGACTGGGCCAGGATTAAAGTCCACCAGGCATAGTCCTTATTGGCTATTTCTATGAGGAATCTCAAATCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000419531.3 ENST00000649834.1 ENST00000663144.1 |
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| CDS TCA 90 bp | AAACCCTGTTCTAAGAACTCCTTCCTGATCTCTTCCGTTTGGGAATaGATCTCTACCTTCTTCTCTTACGTGCCCATGGTACTTTGTGTC | + |
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Preference number: 5 (lower is better) Translates to: KPCSKNSFLISSVWE*ISTFFSYVPMVLCV Trigger: GACACAAAGTACCATGGGCACGTAAGAGAAGAAGGTAGAGATTCATTCCCAAACGGAAGAGATCAGGAAGGAGTTCTTAGAACAGGGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000419531.3 ENST00000649834.1 ENST00000663144.1 |
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| CDS CCA 90 bp | GATTTGAGATTCCTCATAGAAATAGCCAATAAGGACTATGCCTGGTaGACTTTAATCCTGGCCCAGTCGCCAGAATGTCAAGGTTTCTTT | + |
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Preference number: 5 (lower is better) Translates to: DLRFLIEIANKDYAW*TLILAQSPECQGFF Trigger: AAAGAAACCTTGACATTCTGGCGACTGGGCCAGGATTAAAGTCCACCAGGCATAGTCCTTATTGGCTATTTCTATGAGGAATCTCAAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000419531.3 ENST00000649834.1 ENST00000663144.1 |
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| CDS CCA 90 bp | AGGTTTAGGAGTTGTAAACACATTCCAGCTCATATGATTCTGCTGTaGTCCATGAACGTGCTACCTTCCTTTCTTAGAGAAATGTTCTTT | + |
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Preference number: 5 (lower is better) Translates to: RFRSCKHIPAHMILL*SMNVLPSFLREMFF Trigger: AAAGAACATTTCTCTAAGAAAGGAAGGTAGCACGTTCATGGACCACAGCAGAATCATATGAGCTGGAATGTGTTTACAACTCCTAAACCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653297.1 |
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| CDS CCA 72 bp | GGCTCCCAGGACCAGCAGAAACAGGAACCAAGCTGGTaGAAGGGAGCAGGGGAGACTGCCAGGCCTGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: GSQDQQKQEPSW*KGAGETARPGC Trigger: GCAGCCAGGCCTGGCAGTCTCCCCTGCTCCCTTCCACCAGCTTGGTTCCTGTTTCTGCTGGTCCTGGGAGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000419531.3 ENST00000649834.1 ENST00000663144.1 |
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| CDS CCA 72 bp | GGGCGGGACCTGCGGCGACCTGTGGGCGGAAGTCTGTaGCTTTATTTACACAGAGGGCAGCCCGTGGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: GRDLRRPVGGSL*LYLHRGQPVEA Trigger: AGCCTCCACGGGCTGCCCTCTGTGTAAATAAAGCCACAGACTTCCGCCCACAGGTCGCCGCAGGTCCCGCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669294.1 |
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| CDS GCA 72 bp | GCTACCCAGGATATGCGCCCACCACCCGGCCGGGAGTaGAGAGATTTGAAGTCCAGGTTCTACCCCGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: ATQDMRPPPGRE*RDLKSRFYPGL Trigger: GAGCCCGGGGTAGAACCTGGACTTCAAATCTCTGCACTCCCGGCCGGGTGGTGGGCGCATATCCTGGGTAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000419531.3 ENST00000649834.1 ENST00000653297.1 ENST00000663144.1 ENST00000669294.1 |
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| CDS CCA 72 bp | AGAGCCACACGTGACCGGAGGATTCCTCCTCTGGCCTaGAGCCGGCTGATAAGGGCAGTCCATCTGCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RATRDRRIPPLA*SRLIRAVHLLG Trigger: CCCCAGCAGATGGACTGCCCTTATCAGCCGGCTCCAGGCCAGAGGAGGAATCCTCCGGTCACGTGTGGCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000419531.3 ENST00000649834.1 ENST00000663144.1 |
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| CDS CAA 90 bp | GCTACCCAGGATATGCGCCCACCACCCGGCCGGGAGTGCAGAGATTaGAAGTCCAGGTTCTACCCCGGGCTCCGAGTACTACTGCGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: ATQDMRPPPGRECRD*KSRFYPGLRVLLRD Trigger: GTCACGCAGTAGTACTCGGAGCCCGGGGTAGAACCTGGACTTCAAATCTCTGCACTCCCGGCCGGGTGGTGGGCGCATATCCTGGGTAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000419531.3 ENST00000649834.1 ENST00000653297.1 ENST00000663144.1 ENST00000669294.1 |
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| CDS TCA 72 bp | GTCCAGGTTCTACCCCGGGCTCCGAGTACTACTGCGTaGCTTTATGCGAGTGTCCGCCGCCTTCTGGGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: VQVLPRAPSTTA*LYASVRRLLGL Trigger: CAAGCCCAGAAGGCGGCGGACACTCGCATAAAGTCACGCAGTAGTACTCGGAGCCCGGGGTAGAACCTGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000419531.3 ENST00000649834.1 ENST00000653297.1 ENST00000663144.1 ENST00000669294.1 |
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| CDS TCA 72 bp | ATATGCGCCCACCACCCGGCCGGGAGTGCAGAGATTTaGAGTCCAGGTTCTACCCCGGGCTCCGAGTACTAC | + |
|
Preference number: 6 (lower is better) Translates to: ICAHHPAGSAEI*SPGSTPGSEYY Trigger: GTAGTACTCGGAGCCCGGGGTAGAACCTGGACTTCAAATCTCTGCACTCCCGGCCGGGTGGTGGGCGCATAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000419531.3 ENST00000649834.1 ENST00000653297.1 ENST00000663144.1 ENST00000669294.1 |
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| CDS CCA 72 bp | CCTTATTGGATTGTGGACTTCGCCAGGCAGGAACGATaGCTCGCCCGGGGCATGGAGCTCAGTGATGGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: PYWIVDFARQER*LARGMELSDGH Trigger: GTGCCCATCACTGAGCTCCATGCCCCGGGCGAGCCATCGTTCCTGCCTGGCGAAGTCCACAATCCAATAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000419531.3 ENST00000649834.1 ENST00000663144.1 |
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| CDS CCA 72 bp | CTTCCTCTGGCTAGAACCGGAAAACCTTGTTCACACTaGCACAGGTCCCAGGGCGTGAGCCCCTGTGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LPLARTGKPCSH*HRSQGVSPCGG Trigger: GCCTCCACAGGGGCTCACGCCCTGGGACCTGTGCCAGTGTGAACAAGGTTTTCCGGTTCTAGCCAGAGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000663144.1 |
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| CDS CAA 72 bp | GATATGCGCCCACCACCCGGCCGGGAGTGCAGAGATTaGAAGTCCAGGTTCTACCCCGGGCTCCGAGTACTA | + |
|
Preference number: 6 (lower is better) Translates to: DMRPPPGRECRD*KSRFYPGLRVL Trigger: TAGTACTCGGAGCCCGGGGTAGAACCTGGACTTCAAATCTCTGCACTCCCGGCCGGGTGGTGGGCGCATATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000419531.3 ENST00000649834.1 ENST00000653297.1 ENST00000663144.1 ENST00000669294.1 |
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| CDS CAA 72 bp | AGAGTACTTAGGCCTGCTTCCTGGGGCCGGAAAACCTaGTTCACACTGGCACAGGTCCCAGGGCGTGAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RVLRPASWGRKT*FTLAQVPGREP Trigger: GGGCTCACGCCCTGGGACCTGTGCCAGTGTGAACAAGGTTTTCCGGCCCCAGGAAGCAGGCCTAAGTACTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419531.3 |
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| CDS TCA 72 bp | GAAAACCTTGTTCACACTGGCACAGGTCCCAGGGCGTaGGCCCCTGTGGAGGCTGGGTCTCTCCCTTTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: ENLVHTGTGPRA*APVEAGSLPFH Trigger: ATGGAAAGGGAGAGACCCAGCCTCCACAGGGGCTCACGCCCTGGGACCTGTGCCAGTGTGAACAAGGTTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000419531.3 ENST00000663144.1 |
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| CDS TCA 72 bp | ATTTATGAGGTCTCTCTCCCTCCAGAGAGCCACACGTaGCCGGAGGATTCCTCCTCTGGCCTGGAGCCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: IYEVSLPPESHT*PEDSSSGLEPA Trigger: AGCCGGCTCCAGGCCAGAGGAGGAATCCTCCGGTCACGTGTGGCTCTCTGGAGGGAGAGAGACCTCATAAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000419531.3 ENST00000649834.1 ENST00000663144.1 |
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| CDS GCA 72 bp | TCTACCCCGGGCTCCGAGTACTACTGCGTGACTTTATaGGAGTGTCCGCCGCCTTCTGGGCTTGTTTTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: STPGSEYYCVTL*ECPPPSGLVFP Trigger: CGGGAAAACAAGCCCAGAAGGCGGCGGACACTCGCATAAAGTCACGCAGTAGTACTCGGAGCCCGGGGTAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000419531.3 ENST00000649834.1 ENST00000653297.1 ENST00000663144.1 |
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| CDS GCA 72 bp | ATAGTGCCCTCTTCTAACTCCCACAGAGGTGTTCTTTaGTGCCAACCCCAGTGGCTGGTCCAGGGGCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: IVPSSNSHRGVL*CQPQWLVQGQA Trigger: GGCCTGCCCCTGGACCAGCCACTGGGGTTGGCAGCAAAGAACACCTCTGTGGGAGTTAGAAGAGGGCACTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653297.1 |
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| CDS CCA 72 bp | CTACTGCGTGACTTTATGCGAGTGTCCGCCGCCTTCTaGGCTTGTTTTCCCGGAAGCAACTCGGCGCGGATG | + |
|
Preference number: 6 (lower is better) Translates to: LLRDFMRVSAAF*ACFPGSNSARM Trigger: CATCCGCGCCGAGTTGCTTCCGGGAAAACAAGCCCAGAAGGCGGCGGACACTCGCATAAAGTCACGCAGTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000649834.1 ENST00000653297.1 ENST00000663144.1 |
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| CDS CAA 90 bp | GGCGTGAGCCCCTGTGGAGGCTGGGTCTCTCCCTTTCCATTTCCCTaGTTGACTTCCAGCGCGACTGTTGTTAGCTCGCAGATGGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: GVSPCGGWVSPFPFP*LTSSATVVSSQMDR Trigger: CCTGTCCATCTGCGAGCTAACAACAGTCGCGCTGGAAGTCAACAAGGGAAATGGAAAGGGAGAGACCCAGCCTCCACAGGGGCTCACGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419531.3 ENST00000663144.1 |
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| CDS CAA 90 bp | GTGAGCCCCTGTGGAGGCTGGGTCTCTCCCTTTCCATTTCCCTTGTaGACTTCCAGCGCGACTGTTGTTAGCTCGCAGATGGACAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: VSPCGGWVSPFPFPL*TSSATVVSSQMDRQ Trigger: CTGCCTGTCCATCTGCGAGCTAACAACAGTCGCGCTGGAAGTCAACAAGGGAAATGGAAAGGGAGAGACCCAGCCTCCACAGGGGCTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000419531.3 ENST00000663144.1 |
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| CDS GCA 72 bp | GGCAGGGATAATAAGTGGGGACTGGAATCCAGCCTGTaGTCTGCAGGGCAAGCTTGCACCTGTGGAGGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: GRDNKWGLESSL*SAGQACTCGGA Trigger: TGCACCTCCACAGGTGCAAGCTTGCCCTGCAGAGCACAGGCTGGATTCCAGTCCCCACTTATTATCCCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653297.1 |
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| CDS TCA 72 bp | GACAGGCAGTGCTCCATGACTTGCCAGCTGCCAGGCTaGATCTGCCTTGGTTCCATGTGTCTAGCGCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: DRQCSMTCQLPG*ICLGSMCLALP Trigger: AGGAAGCGCTAGACACATGGAACCAAGGCAGATTCAGCCTGGCAGCTGGCAAGTCATGGAGCACTGCCTGTC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419531.3 ENST00000663144.1 |
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| CDS TCA 72 bp | ATTCGGGCTGCTGTCTCTCTAGGGCCTACCATGTTCTaGGTGATCAGTGGAGAAGGGTGCTCATGGGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: IRAAVSLGPTMF*VISGEGCSWVG Trigger: CCCCACCCATGAGCACCCTTCTCCACTGATCACTCAGAACATGGTAGGCCCTAGAGAGACAGCAGCCCGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669294.1 |
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| CDS CCA 72 bp | GATTCATCCCTTCAACCTTCCCTCCTTATTGGATTGTaGACTTCGCCAGGCAGGAACGATGGCTCGCCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: DSSLQPSLLIGL*TSPGRNDGSPG Trigger: CCCGGGCGAGCCATCGTTCCTGCCTGGCGAAGTCCACAATCCAATAAGGAGGGAAGGTTGAAGGGATGAATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000419531.3 ENST00000649834.1 ENST00000663144.1 |
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| CDS CCA 72 bp | ATCCAGCCTGTGCTCTGCAGGGCAAGCTTGCACCTGTaGAGGTGCAGACACTCAGAAGATAGTGCCCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: IQPVLCRASLHL*RCRHSEDSALF Trigger: GAAGAGGGCACTATCTTCTGAGTGTCTGCACCTCCACAGGTGCAAGCTTGCCCTGCAGAGCACAGGCTGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653297.1 |
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| CDS CCA 72 bp | TGTCTCTCTAGGGCCTACCATGTTCTGAGTGATCAGTaGAGAAGGGTGCTCATGGGTGGGGACTCCGACGGT | + |
|
Preference number: 6 (lower is better) Translates to: CLSRAYHVLSDQ*RRVLMGGDSDG Trigger: ACCGTCGGAGTCCCCACCCATGAGCACCCTTCTCCACTGATCACTCAGAACATGGTAGGCCCTAGAGAGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669294.1 |
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| CDS TCA 72 bp | CTGTTGTTAGCTCGCAGATGGACAGGCAGTGCTCCATaGCTTGCCAGCTGCCAGGCTGAATCTGCCTTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: LLLARRWTGSAP*LASCQAESALV Trigger: AACCAAGGCAGATTCAGCCTGGCAGCTGGCAAGTCATGGAGCACTGCCTGTCCATCTGCGAGCTAACAACAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419531.3 ENST00000663144.1 |
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| CDS CAA 90 bp | GTGCACAATTCTGTTGAGATTCATCCCTTCAACCTTCCCTCCTTATaGGATTGTGGACTTCGCCAGGCAGGAACGATGGCTCGCCCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: VHNSVEIHPFNLPSL*DCGLRQAGTMARPG Trigger: CCCCGGGCGAGCCATCGTTCCTGCCTGGCGAAGTCCACAATCCAATAAGGAGGGAAGGTTGAAGGGATGAATCTCAACAGAATTGTGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000419531.3 ENST00000649834.1 ENST00000663144.1 |
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| CDS CAA 90 bp | CCAGGTCCGCCATGTACAGTTGTGCAGGTTATGCCCTGTAGAAGCTaGTCTGGCAGGGATAATAAGTGGGGACTGGAATCCAGCCTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: PGPPCTVVQVMPCRS*SGRDNKWGLESSLC Trigger: GCACAGGCTGGATTCCAGTCCCCACTTATTATCCCTGCCAGACAAGCTTCTACAGGGCATAACCTGCACAACTGTACATGGCGGACCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653297.1 |
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| CDS GCA 72 bp | GCTGTCAGAATCAGAGCACCCCGTTCCAGCCAACTCTaGCATTCCTGGGGCTTGGTAGTTTGGTTTCTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: AVRIRAPRSSQL*HSWGLVVWFLH Trigger: ATGGAGAAACCAAACTACCAAGCCCCAGGAATGGCAGAGTTGGCTGGAACGGGGTGCTCTGATTCTGACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653297.1 |
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| CDS CAA 90 bp | CATCATGCCTCAGCTTCATTCGTGGGCTGGGAACACAGTGTTTCTTaGGCTTGTATGGCTGAGAGGCAGACGCAGAAAGAGCGTGAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: HHASASFVGWEHSVS*ACMAERQTQKEREW Trigger: CCACTCACGCTCTTTCTGCGTCTGCCTCTCAGCCATACAAGCCAAAGAAACACTGTGTTCCCAGCCCACGAATGAAGCTGAGGCATGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653297.1 |
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| CDS TCA 72 bp | ACAGCCCTACCAGGTAACTGTGTGTATGACCCTGACTaGGTCGGCTACTCTCTCAGAGCCTCAGTTTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: TALPGNCVYDPD*VGYSLRASVSS Trigger: TGAGGAAACTGAGGCTCTGAGAGAGTAGCCGACTCAGTCAGGGTCATACACACAGTTACCTGGTAGGGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653297.1 |
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| CDS GCA 72 bp | GCCAGCCAGGTCCGCCATGTACAGTTGTGCAGGTTATaGCCTGTAGAAGCTTGTCTGGCAGGGATAATAAGT | + |
|
Preference number: 6 (lower is better) Translates to: ASQVRHVQLCRL*PVEACLAGIIS Trigger: ACTTATTATCCCTGCCAGACAAGCTTCTACAGGGCATAACCTGCACAACTGTACATGGCGGACCTGGCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653297.1 |
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| CDS GCA 72 bp | AGGAATCTCCTGCAGGGTTTCTGGGAAGATTCGGGCTaGTGTCTCTCTAGGGCCTACCATGTTCTGAGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: RNLLQGFWEDSG*CLSRAYHVLSD Trigger: ATCACTCAGAACATGGTAGGCCCTAGAGAGACAGCAGCCCGAATCTTCCCAGAAACCCTGCAGGAGATTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669294.1 |
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| CDS CCA 72 bp | CTCAGTGATGAAATGAGAGTACTTAGGCCTGCTTCCTaGGGCCGGAAAACCTTGTTCACACTGGCACAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LSDEMRVLRPAS*GRKTLFTLAQV Trigger: GACCTGTGCCAGTGTGAACAAGGTTTTCCGGCCCCAGGAAGCAGGCCTAAGTACTCTCATTTCATCACTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419531.3 |
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| CDS CCA 72 bp | TGCCCACCCAGAACTCCCCAAATCTCCTTCTTACTCTaGGGTTTGGAAGAGGCTGAAATGTGGGTACTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: CPPRTPQISFLL*GLEEAEMWVLR Trigger: CCTGAGTACCCACATTTCAGCCTCTTCCAAACCCCAGAGTAAGAAGGAGATTTGGGGAGTTCTGGGTGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000419531.3 ENST00000649834.1 ENST00000663144.1 |
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| CDS CCA 72 bp | CAGCTTCATTCGTGGGCTGGGAACACAGTGTTTCTTTaGCTTGTATGGCTGAGAGGCAGACGCAGAAAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: QLHSWAGNTVFL*LVWLRGRRRKS Trigger: GCTCTTTCTGCGTCTGCCTCTCAGCCATACAAGCCAAAGAAACACTGTGTTCCCAGCCCACGAATGAAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653297.1 |
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| CDS CCA 72 bp | TGTGGGTACTCAGGGCCCTGGAAGCTGGCAAGTATTTaGCAGTTCAGTTCAAAGAGGAAATCCGAGAGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: CGYSGPWKLASI*QFSSKRKSERV Trigger: TACCCTCTCGGATTTCCTCTTTGAACTGAACTGCCAAATACTTGCCAGCTTCCAGGGCCCTGAGTACCCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000419531.3 ENST00000649834.1 ENST00000663144.1 |
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| CDS CCA 72 bp | ATCAGAGCACCCCGTTCCAGCCAACTCTGCCATTCCTaGGGCTTGGTAGTTTGGTTTCTCCATCAGTTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: IRAPRSSQLCHS*GLVVWFLHQFF Trigger: AAAGAACTGATGGAGAAACCAAACTACCAAGCCCCAGGAATGGCAGAGTTGGCTGGAACGGGGTGCTCTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653297.1 |
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| CDS CCA 72 bp | TTCAACGTGCCGAGCCTCAGCCTCCCTTCTATAAAATaGGAAGAAGGAATCTCCTGCAGGGTTTCTGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: FNVPSLSLPSIK*EEGISCRVSGK Trigger: CTTCCCAGAAACCCTGCAGGAGATTCCTTCTTCCCATTTTATAGAAGGGAGGCTGAGGCTCGGCACGTTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669294.1 |
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| CDS CAA 72 bp | ATGTGGGTACTCAGGGCCCTGGAAGCTGGCAAGTATTaGGCAGTTCAGTTCAAAGAGGAAATCCGAGAGGGT | + |
|
Preference number: 6 (lower is better) Translates to: MWVLRALEAGKY*AVQFKEEIREG Trigger: ACCCTCTCGGATTTCCTCTTTGAACTGAACTGCCAAATACTTGCCAGCTTCCAGGGCCCTGAGTACCCACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000419531.3 ENST00000649834.1 ENST00000663144.1 |
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| CDS TCA 72 bp | AGCCTCTCTTTCTGCTGCTGTAAACCAAGGAGGGCTTaGATGGTGAGGGCTGTCCAATCAATGACTGAACGT | + |
|
Preference number: 6 (lower is better) Translates to: SLSFCCCKPRRA*MVRAVQSMTER Trigger: ACGTTCAGTCATTGATTGGACAGCCCTCACCATTCAAGCCCTCCTTGGTTTACAGCAGCAGAAAGAGAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000419531.3 ENST00000649834.1 |
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| CDS TCA 72 bp | CTTTCTAACAGTAGTAATTGGCCAGGTGTAGACATCTaGTTCGAACTGGGAGTGCCCAGCCCCACATCCACT | + |
|
Preference number: 6 (lower is better) Translates to: LSNSSNWPGVDI*FELGVPSPTST Trigger: AGTGGATGTGGGGCTGGGCACTCCCAGTTCGAATCAGATGTCTACACCTGGCCAATTACTACTGTTAGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653297.1 |
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| CDS CCA 72 bp | TATAAAATGGGAAGAAGGAATCTCCTGCAGGGTTTCTaGGAAGATTCGGGCTGCTGTCTCTCTAGGGCCTAC | + |
|
Preference number: 6 (lower is better) Translates to: YKMGRRNLLQGF*EDSGCCLSRAY Trigger: GTAGGCCCTAGAGAGACAGCAGCCCGAATCTTCCCAGAAACCCTGCAGGAGATTCCTTCTTCCCATTTTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669294.1 |
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| CDS CAA 72 bp | GCACCCCGTTCCAGCCAACTCTGCCATTCCTGGGGCTaGGTAGTTTGGTTTCTCCATCAGTTCTTTGATTTT | + |
|
Preference number: 6 (lower is better) Translates to: APRSSQLCHSWG*VVWFLHQFFDF Trigger: AAAATCAAAGAACTGATGGAGAAACCAAACTACCAAGCCCCAGGAATGGCAGAGTTGGCTGGAACGGGGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653297.1 |
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| CDS CAA 72 bp | CCATGTACAGTTGTGCAGGTTATGCCCTGTAGAAGCTaGTCTGGCAGGGATAATAAGTGGGGACTGGAATCC | + |
|
Preference number: 6 (lower is better) Translates to: PCTVVQVMPCRS*SGRDNKWGLES Trigger: GGATTCCAGTCCCCACTTATTATCCCTGCCAGACAAGCTTCTACAGGGCATAACCTGCACAACTGTACATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653297.1 |
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| CDS GCA 72 bp | GGGTTCTGTGAGACTTCACTGAGCCAGGAGATAAAGTaGTCTGTAAACTGTGAAAGGTCAGTCCTGGGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: GFCETSLSQEIK*SVNCERSVLGK Trigger: TTTGCCCAGGACTGACCTTTCACAGTTTACAGAGCACTTTATCTCCTGGCTCAGTGAAGTCTCACAGAACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000419531.3 ENST00000649834.1 ENST00000663144.1 |
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| CDS TCA 72 bp | CATCCCTGTGATACTGAGGAAACTGCTGAGAGAGAATaGGGCCAGTACATCAATGAACTCAGAAGATGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: HPCDTEETAERE*GQYINELRRWR Trigger: CCTCCATCTTCTGAGTTCATTGATGTACTGGCCTCATTCTCTCTCAGCAGTTTCCTCAGTATCACAGGGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653297.1 |
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| CDS CCA 72 bp | ACAATCTCGGTGACGATAGGTGGGTTGGGGAGAGACTaGGTTTTGCAGCCAGATATTGGGTTACAATATCTT | + |
|
Preference number: 6 (lower is better) Translates to: TISVTIGGLGRD*VLQPDIGLQYL Trigger: AAGATATTGTAACCCAATATCTGGCTGCAAAACCCAGTCTCTCCCCAACCCACCTATCGTCACCGAGATTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669294.1 |
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| CDS TCA 72 bp | TCTAAGAACTCCTTCCTGATCTCTTCCGTTTGGGAATaGATCTCTACCTTCTTCTCTTACGTGCCCATGGTA | + |
|
Preference number: 6 (lower is better) Translates to: SKNSFLISSVWE*ISTFFSYVPMV Trigger: TACCATGGGCACGTAAGAGAAGAAGGTAGAGATTCATTCCCAAACGGAAGAGATCAGGAAGGAGTTCTTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000419531.3 ENST00000649834.1 ENST00000663144.1 |
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| CDS CAA 72 bp | AATCTCTACCTTCTTCTCTTACGTGCCCATGGTACTTaGTGTCCCCACTTTAAGACTGCTCACAGACTTACT | + |
|
Preference number: 6 (lower is better) Translates to: NLYLLLLRAHGT*CPHFKTAHRLT Trigger: AGTAAGTCTGTGAGCAGTCTTAAAGTGGGGACACAAAGTACCATGGGCACGTAAGAGAAGAAGGTAGAGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000419531.3 ENST00000649834.1 ENST00000663144.1 |
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| CDS CAA 72 bp | AGGGAGAGGAAAGAATTCAGGATACCTCATGGGTTTTaGGAGAGAGTAACTGGGCAGATGGTTCTTTGTATC | + |
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Preference number: 6 (lower is better) Translates to: RERKEFRIPHGF*ERVTGQMVLCI Trigger: GATACAAAGAACCATCTGCCCAGTTACTCTCTCCAAAAACCCATGAGGTATCCTGAATTCTTTCCTCTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653297.1 |
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| CDS CCA 72 bp | AGTTGTAAACACATTCCAGCTCATATGATTCTGCTGTaGTCCATGAACGTGCTACCTTCCTTTCTTAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: SCKHIPAHMILL*SMNVLPSFLRE Trigger: TTCTCTAAGAAAGGAAGGTAGCACGTTCATGGACCACAGCAGAATCATATGAGCTGGAATGTGTTTACAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653297.1 |
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| CDS CAA 72 bp | TTCTTTCATTGGCTTCTTTCACTGTGCACAATTCTGTaGAGATTCATCCCTTCAACCTTCCCTCCTTATTGG | + |
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Preference number: 6 (lower is better) Translates to: FFHWLLSLCTIL*RFIPSTFPPYW Trigger: CCAATAAGGAGGGAAGGTTGAAGGGATGAATCTCAACAGAATTGTGCACAGTGAAAGAAGCCAATGAAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000419531.3 ENST00000649834.1 ENST00000663144.1 |
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| CDS CAA 72 bp | ATTTCTGTTGTAAGCATCATCCCCATGGGGATAATTTaGGAAGTTGTGGGAGAGAGCACTTGGAGAAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: ISVVSIIPMGII*EVVGESTWRRK Trigger: TTTTCTTCTCCAAGTGCTCTCTCCCACAACTTCCAAAATTATCCCCATGGGGATGATGCTTACAACAGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653297.1 |
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| CDS CAA 90 bp | ATGATTATGAGGGAGAGGAAAGAATTCAGGATACCTCATGGGTTTTaGGAGAGAGTAACTGGGCAGATGGTTCTTTGTATCAATGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: MIMRERKEFRIPHGF*ERVTGQMVLCINEE Trigger: CTCTTCATTGATACAAAGAACCATCTGCCCAGTTACTCTCTCCAAAAACCCATGAGGTATCCTGAATTCTTTCCTCTCCCTCATAATCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653297.1 |
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| CDS CAA 90 bp | GTGGATACGGTGAACTTAGATTCAGATATTATCTGTAGGACATCATaGACTATTTATTCAACAGTGAGCACCCACTCTAGGCCAAGCATT | + |
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Preference number: 6 (lower is better) Translates to: VDTVNLDSDIICRTS*TIYSTVSTHSRPSI Trigger: AATGCTTGGCCTAGAGTGGGTGCTCACTGTTGAATAAATAGTCAATGATGTCCTACAGATAATATCTGAATCTAAGTTCACCGTATCCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653297.1 |
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| CDS GCA 72 bp | CAATATGTACTCTTCTTTCATTGGCTTCTTTCACTGTaGACAATTCTGTTGAGATTCATCCCTTCAACCTTC | + |
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Preference number: 6 (lower is better) Translates to: QYVLFFHWLLSL*TILLRFIPSTF Trigger: GAAGGTTGAAGGGATGAATCTCAACAGAATTGTGCACAGTGAAAGAAGCCAATGAAAGAAGAGTACATATTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000419531.3 ENST00000649834.1 ENST00000663144.1 |
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| CDS TCA 72 bp | CTCTATCTGTATCTTCCATCTGAATCTTTCTTAACCTaGCCCTTACTTATCCATACCTTGAGCTTTGTTGAA | + |
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Preference number: 6 (lower is better) Translates to: LYLYLPSESFLT*PLLIHTLSFVE Trigger: TTCAACAAAGCTCAAGGTATGGATAAGTAAGGGTCAGGTTAAGAAAGATTCAGATGGAAGATACAGATAGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000419531.3 ENST00000649834.1 ENST00000663144.1 |
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| CDS CAA 90 bp | AACCTAGGAGATGGCAGAAGAAACGGAGAGATGATTAGAATATATTaGAGACATATTCAGGAGAATGATTATGAGGGAGAGGAAAGAATT | + |
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Preference number: 6 (lower is better) Translates to: NLGDGRRNGEMIRIY*RHIQENDYEGEERI Trigger: AATTCTTTCCTCTCCCTCATAATCATTCTCCTGAATATGTCTCAAATATATTCTAATCATCTCTCCGTTTCTTCTGCCATCTCCTAGGTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653297.1 |
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