Pregenerated sensors for LINC01133 (Homo sapiens)
Ensembl gene IDs: ENSG00000224259Ensembl transcript IDs: ENST00000423943.2, ENST00000443364.6, ENST00000635112.1, ENST00000657602.1
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CTGTTCCCGGCAGCCCCAGCCCATGGCTGTGCACAGCAAGAGTCCTaGCACCAGGACAGTCTTGCACAGCTAGAGTCCCAGTGCCTGGAC | + |
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Preference number: 5 (lower is better) Translates to: LFPAAPAHGCAQQES*HQDSLAQLESQCLD Trigger: GTCCAGGCACTGGGACTCTAGCTGTGCAAGACTGTCCTGGTGCCAGGACTCTTGCTGTGCACAGCCATGGGCTGGGGCTGCCGGGAACAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657602.1 |
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| CDS GCA 90 bp | AGCCCATGGCTGTGCACAGCAAGAGTCCTGGCACCAGGACAGTCTTaGACAGCTAGAGTCCCAGTGCCTGGACATGCCTGCCCACCACAG | + |
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Preference number: 5 (lower is better) Translates to: SPWLCTARVLAPGQS*TARVPVPGHACPPQ Trigger: CTGTGGTGGGCAGGCATGTCCAGGCACTGGGACTCTAGCTGTGCAAGACTGTCCTGGTGCCAGGACTCTTGCTGTGCACAGCCATGGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657602.1 |
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| CDS GCA 90 bp | ACCTTCGGGATCTACGCTGTTCCCGGCAGCCCCAGCCCATGGCTGTaGACAGCAAGAGTCCTGGCACCAGGACAGTCTTGCACAGCTAGA | + |
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Preference number: 5 (lower is better) Translates to: TFGIYAVPGSPSPWL*TARVLAPGQSCTAR Trigger: TCTAGCTGTGCAAGACTGTCCTGGTGCCAGGACTCTTGCTGTGCACAGCCATGGGCTGGGGCTGCCGGGAACAGCGTAGATCCCGAAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657602.1 |
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| CDS TCA 90 bp | TCTTCCGCCCTGGCCCCTTGCTGCCATGCAGGACTCTGCTGGGAGTaGCGTGGGTCTCTTTCCCTGAGAGAGCTGAAGATCTGCAAGGAG | + |
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Preference number: 5 (lower is better) Translates to: SSALAPCCHAGLCWE*RGSLSLRELKICKE Trigger: CTCCTTGCAGATCTTCAGCTCTCTCAGGGAAAGAGACCCACGTCACTCCCAGCAGAGTCCTGCATGGCAGCAAGGGGCCAGGGCGGAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635112.1 |
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| CDS GCA 90 bp | CAAGAGTCCTGGCACCAGGACAGTCTTGCACAGCTAGAGTCCCAGTaGCTGGACATGCCTGCCCACCACAGGCCTTCTCTAACGGGCAGT | + |
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Preference number: 5 (lower is better) Translates to: QESWHQDSLAQLESQ*LDMPAHHRPSLTGS Trigger: ACTGCCCGTTAGAGAAGGCCTGTGGTGGGCAGGCATGTCCAGGCACTGGGACTCTAGCTGTGCAAGACTGTCCTGGTGCCAGGACTCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657602.1 |
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| CDS CCA 90 bp | CGCCCTGGCCCCTTGCTGCCATGCAGGACTCTGCTGGGAGTGACGTaGGTCTCTTTCCCTGAGAGAGCTGAAGATCTGCAAGGAGACCTT | + |
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Preference number: 5 (lower is better) Translates to: RPGPLLPCRTLLGVT*VSFPERAEDLQGDL Trigger: AAGGTCTCCTTGCAGATCTTCAGCTCTCTCAGGGAAAGAGACCCACGTCACTCCCAGCAGAGTCCTGCATGGCAGCAAGGGGCCAGGGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635112.1 |
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| CDS CCA 90 bp | GGCACTGCCTTTCTTCTCCAGGTGTCTTTTGTTCTTCTTCCGCCCTaGCCCCTTGCTGCCATGCAGGACTCTGCTGGGAGTGACGTGGGT | + |
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Preference number: 5 (lower is better) Translates to: GTAFLLQVSFVLLPP*PLAAMQDSAGSDVG Trigger: ACCCACGTCACTCCCAGCAGAGTCCTGCATGGCAGCAAGGGGCCAGGGCGGAAGAAGAACAAAAGACACCTGGAGAAGAAAGGCAGTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000635112.1 |
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| CDS GCA 90 bp | TCCAGGTGTCTTTTGTTCTTCTTCCGCCCTGGCCCCTTGCTGCCATaGAGGACTCTGCTGGGAGTGACGTGGGTCTCTTTCCCTGAGAGA | + |
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Preference number: 5 (lower is better) Translates to: SRCLLFFFRPGPLLP*RTLLGVTWVSFPER Trigger: TCTCTCAGGGAAAGAGACCCACGTCACTCCCAGCAGAGTCCTGCATGGCAGCAAGGGGCCAGGGCGGAAGAAGAACAAAAGACACCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000635112.1 |
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| CDS GCA 90 bp | CTGCTCCATCATATCTGCAGCCCTGGCTGCTGCAGGGAAAGGCACTaGCTTTCTTCTCCAGGTGTCTTTTGTTCTTCTTCCGCCCTGGCC | + |
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Preference number: 5 (lower is better) Translates to: LLHHICSPGCCRERH*LSSPGVFCSSSALA Trigger: GGCCAGGGCGGAAGAAGAACAAAAGACACCTGGAGAAGAAAGGCAGTGCCTTTCCCTGCAGCAGCCAGGGCTGCAGATATGATGGAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635112.1 |
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| CDS CCA 90 bp | GCTCTAGAAGAGACCATCTCCCCTGCTCCATCATATCTGCAGCCCTaGCTGCTGCAGGGAAAGGCACTGCCTTTCTTCTCCAGGTGTCTT | + |
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Preference number: 5 (lower is better) Translates to: ALEETISPAPSYLQP*LLQGKALPFFSRCL Trigger: AAGACACCTGGAGAAGAAAGGCAGTGCCTTTCCCTGCAGCAGCCAGGGCTGCAGATATGATGGAGCAGGGGAGATGGTCTCTTCTAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635112.1 |
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| CDS GCA 90 bp | AAGAGACCATCTCCCCTGCTCCATCATATCTGCAGCCCTGGCTGCTaGAGGGAAAGGCACTGCCTTTCTTCTCCAGGTGTCTTTTGTTCT | + |
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Preference number: 5 (lower is better) Translates to: KRPSPLLHHICSPGC*RERHCLSSPGVFCS Trigger: AGAACAAAAGACACCTGGAGAAGAAAGGCAGTGCCTTTCCCTGCAGCAGCCAGGGCTGCAGATATGATGGAGCAGGGGAGATGGTCTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000635112.1 |
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| CDS GCA 90 bp | CTTAGAAAGGACCTTAGGAATCATCTATCCCCTCCACCCCATCCCTaGCTTGCCACGAGGATTAATTGCTCTCTAAGTGCCTTGGCCAAT | + |
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Preference number: 5 (lower is better) Translates to: LRKDLRNHLSPPPHP*LATRINCSLSALAN Trigger: ATTGGCCAAGGCACTTAGAGAGCAATTAATCCTCGTGGCAAGGCAGGGATGGGGTGGAGGGGATAGATGATTCCTAAGGTCCTTTCTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000635112.1 |
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| CDS CCA 90 bp | GGTCTGTCCTTGGTTACCACCACTGATGTCTACCATGCTGGACTTTaGAGAACTTTGCTTCCACTTCAGCACACCTTGGTACCTTCAGTC | + |
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Preference number: 5 (lower is better) Translates to: GLSLVTTTDVYHAGL*RTLLPLQHTLVPSV Trigger: GACTGAAGGTACCAAGGTGTGCTGAAGTGGAAGCAAAGTTCTCCAAAGTCCAGCATGGTAGACATCAGTGGTGGTAACCAAGGACAGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000423943.2 ENST00000443364.6 ENST00000657602.1 |
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| CDS CCA 90 bp | GGACTGCATAGACTTGAGGTTCCATTTTTGAGGTTCACCTTGCCTTaGGGTCTGTCCTTGGTTACCACCACTGATGTCTACCATGCTGGA | + |
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Preference number: 5 (lower is better) Translates to: GLHRLEVPFLRFTLP*GLSLVTTTDVYHAG Trigger: TCCAGCATGGTAGACATCAGTGGTGGTAACCAAGGACAGACCCCAAGGCAAGGTGAACCTCAAAAATGGAACCTCAAGTCTATGCAGTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000423943.2 ENST00000443364.6 ENST00000657602.1 |
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| CDS CCA 90 bp | CCAAGGCTGTTACATCAGAATTGGGGTGTGGGTCTGATTTCTCATTaGCTTAATTGCTCTGTAGCAGCCTCGGCTCCCCCTTCAAGAGTA | + |
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Preference number: 5 (lower is better) Translates to: PRLLHQNWGVGLISH*LNCSVAASAPPSRV Trigger: TACTCTTGAAGGGGGAGCCGAGGCTGCTACAGAGCAATTAAGCCAATGAGAAATCAGACCCACACCCCAATTCTGATGTAACAGCCTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657602.1 |
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| CDS TCA 90 bp | TTTGAGGTTCACCTTGCCTTGGGGTCTGTCCTTGGTTACCACCACTaGTGTCTACCATGCTGGACTTTGGAGAACTTTGCTTCCACTTCA | + |
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Preference number: 5 (lower is better) Translates to: FEVHLALGSVLGYHH*CLPCWTLENFASTS Trigger: TGAAGTGGAAGCAAAGTTCTCCAAAGTCCAGCATGGTAGACATCAGTGGTGGTAACCAAGGACAGACCCCAAGGCAAGGTGAACCTCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000423943.2 ENST00000443364.6 ENST00000657602.1 |
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| CDS GCA 90 bp | CAACTCTGCTTTCCTCTCTGCTTCTGTCATCAGGGGGCTGCATCCTaGTTTTCTCTTAGAAGGACTCTTGTGATTACATCAAGCCTACTC | + |
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Preference number: 5 (lower is better) Translates to: QLCFPLCFCHQGAAS*FSLRRTLVITSSLL Trigger: GAGTAGGCTTGATGTAATCACAAGAGTCCTTCTAAGAGAAAAGCAGGATGCAGCCCCCTGATGACAGAAGCAGAGAGGAAAGCAGAGTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000635112.1 |
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| CDS CCA 90 bp | CACATAGTTGAATTAAGTATTTCTGGGGCCAGTGTGGGGGAAAGATaGTATGGAATGGGAGAATCCATCCTTCCTGCAAGAGGAGAAAGC | + |
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Preference number: 5 (lower is better) Translates to: HIVELSISGASVGER*YGMGESILPARGES Trigger: GCTTTCTCCTCTTGCAGGAAGGATGGATTCTCCCATTCCATACCATCTTTCCCCCACACTGGCCCCAGAAATACTTAATTCAACTATGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000423943.2 ENST00000443364.6 ENST00000657602.1 |
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| CDS GCA 90 bp | TGGTTACCACCACTGATGTCTACCATGCTGGACTTTGGAGAACTTTaGTTCCACTTCAGCACACCTTGGTACCTTCAGTCAAGCTTTTAT | + |
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Preference number: 5 (lower is better) Translates to: WLPPLMSTMLDFGEL*FHFSTPWYLQSSFY Trigger: ATAAAAGCTTGACTGAAGGTACCAAGGTGTGCTGAAGTGGAAGCAAAGTTCTCCAAAGTCCAGCATGGTAGACATCAGTGGTGGTAACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000423943.2 ENST00000443364.6 ENST00000657602.1 |
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| CDS GCA 90 bp | TTACATCAGAATTGGGGTGTGGGTCTGATTTCTCATTGGCTTAATTaGTCTGTAGCAGCCTCGGCTCCCCCTTCAAGAGTAAACACATTT | + |
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Preference number: 5 (lower is better) Translates to: LHQNWGVGLISHWLN*SVAASAPPSRVNTF Trigger: AAATGTGTTTACTCTTGAAGGGGGAGCCGAGGCTGCTACAGAGCAATTAAGCCAATGAGAAATCAGACCCACACCCCAATTCTGATGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657602.1 |
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| CDS TCA 90 bp | CAACCAACAGATGAAGAGGCACAGATGGATGCCTCTTTCATCTGGTaGACTGATAGAAGTGCTGTGATGAACCTCCACAGTAGAAGAAAA | + |
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Preference number: 5 (lower is better) Translates to: QPTDEEAQMDASFIW*TDRSAVMNLHSRRK Trigger: TTTTCTTCTACTGTGGAGGTTCATCACAGCACTTCTATCAGTTCACCAGATGAAAGAGGCATCCATCTGTGCCTCTTCATCTGTTGGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635112.1 |
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| CDS CCA 90 bp | AGAGGTTTATTGAAAGCTCTTATTAGAAAAATGAGGTGGGTGGTGTaGGCCCATTGCAAAAGGAGAGTCATAGAAGTACACACCCTGGCA | + |
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Preference number: 5 (lower is better) Translates to: RGLLKALIRKMRWVV*AHCKRRVIEVHTLA Trigger: TGCCAGGGTGTGTACTTCTATGACTCTCCTTTTGCAATGGGCCCACACCACCCACCTCATTTTTCTAATAAGAGCTTTCAATAAACCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000443364.6 |
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| CDS GCA 90 bp | CGATTACTATTACATGTATTGAATCAAGCAACACTCCAAGGCAGCTaGTATTTACTGAAGAATACAAGTGTATTCTTTGGTTTGTGGCCC | + |
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Preference number: 5 (lower is better) Translates to: RLLLHVLNQATLQGS*YLLKNTSVFFGLWP Trigger: GGGCCACAAACCAAAGAATACACTTGTATTCTTCAGTAAATAGCAGCTGCCTTGGAGTGTTGCTTGATTCAATACATGTAATAGTAATCG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635112.1 |
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| CDS TCA 90 bp | CAGTGCAGCTCTAAGACATCCAAGGGTATAATAGCAAGCATTTATTaGACGATTACTATTACATGTATTGAATCAAGCAACACTCCAAGG | + |
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Preference number: 5 (lower is better) Translates to: QCSSKTSKGIIASIY*TITITCIESSNTPR Trigger: CCTTGGAGTGTTGCTTGATTCAATACATGTAATAGTAATCGTTCAATAAATGCTTGCTATTATACCCTTGGATGTCTTAGAGCTGCACTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635112.1 |
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| CDS CCA 72 bp | GCAGCCCCAGCCCATGGCTGTGCACAGCAAGAGTCCTaGCACCAGGACAGTCTTGCACAGCTAGAGTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: AAPAHGCAQQES*HQDSLAQLESQ Trigger: CTGGGACTCTAGCTGTGCAAGACTGTCCTGGTGCCAGGACTCTTGCTGTGCACAGCCATGGGCTGGGGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657602.1 |
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| CDS GCA 72 bp | TCTTGCACAGCTAGAGTCCCAGTGCCTGGACATGCCTaGCCACCACAGGCCTTCTCTAACGGGCAGTCGGTG | + |
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Preference number: 6 (lower is better) Translates to: SCTARVPVPGHA*PPQAFSNGQSV Trigger: CACCGACTGCCCGTTAGAGAAGGCCTGTGGTGGGCAGGCATGTCCAGGCACTGGGACTCTAGCTGTGCAAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657602.1 |
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| CDS TCA 72 bp | CTGGCCCCTTGCTGCCATGCAGGACTCTGCTGGGAGTaGCGTGGGTCTCTTTCCCTGAGAGAGCTGAAGATC | + |
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Preference number: 6 (lower is better) Translates to: LAPCCHAGLCWE*RGSLSLRELKI Trigger: GATCTTCAGCTCTCTCAGGGAAAGAGACCCACGTCACTCCCAGCAGAGTCCTGCATGGCAGCAAGGGGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635112.1 |
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| CDS CAA 72 bp | TCCAGGTGTCTTTTGTTCTTCTTCCGCCCTGGCCCCTaGCTGCCATGCAGGACTCTGCTGGGAGTGACGTGG | + |
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Preference number: 6 (lower is better) Translates to: SRCLLFFFRPGP*LPCRTLLGVTW Trigger: CCACGTCACTCCCAGCAGAGTCCTGCATGGCAGCAAGGGGCCAGGGCGGAAGAAGAACAAAAGACACCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000635112.1 |
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| CDS CAA 90 bp | TGGCTGCTGCAGGGAAAGGCACTGCCTTTCTTCTCCAGGTGTCTTTaGTTCTTCTTCCGCCCTGGCCCCTTGCTGCCATGCAGGACTCTG | + |
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Preference number: 6 (lower is better) Translates to: WLLQGKALPFFSRCL*FFFRPGPLLPCRTL Trigger: CAGAGTCCTGCATGGCAGCAAGGGGCCAGGGCGGAAGAAGAACAAAAGACACCTGGAGAAGAAAGGCAGTGCCTTTCCCTGCAGCAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635112.1 |
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| CDS GCA 72 bp | TCTCCCCTGCTCCATCATATCTGCAGCCCTGGCTGCTaGAGGGAAAGGCACTGCCTTTCTTCTCCAGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: SPLLHHICSPGC*RERHCLSSPGV Trigger: GACACCTGGAGAAGAAAGGCAGTGCCTTTCCCTGCAGCAGCCAGGGCTGCAGATATGATGGAGCAGGGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635112.1 |
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| CDS CAA 90 bp | CCTTTCTTCTCCAGGTGTCTTTTGTTCTTCTTCCGCCCTGGCCCCTaGCTGCCATGCAGGACTCTGCTGGGAGTGACGTGGGTCTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: PFFSRCLLFFFRPGP*LPCRTLLGVTWVSF Trigger: GAAAGAGACCCACGTCACTCCCAGCAGAGTCCTGCATGGCAGCAAGGGGCCAGGGCGGAAGAAGAACAAAAGACACCTGGAGAAGAAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000635112.1 |
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| CDS CCA 72 bp | CCCTTGCTGCCATGCAGGACTCTGCTGGGAGTGACGTaGGTCTCTTTCCCTGAGAGAGCTGAAGATCTGCAA | + |
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Preference number: 6 (lower is better) Translates to: PLLPCRTLLGVT*VSFPERAEDLQ Trigger: TTGCAGATCTTCAGCTCTCTCAGGGAAAGAGACCCACGTCACTCCCAGCAGAGTCCTGCATGGCAGCAAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635112.1 |
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| CDS CAA 72 bp | GCAAGGAGACCTTCTCCCTGCCTTTTGCTTCGCATTTaGAAGGGAGGGAGGAGACTAGCCAGAACCACTGAC | + |
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Preference number: 6 (lower is better) Translates to: ARRPSPCLLLRI*KGGRRLARTTD Trigger: GTCAGTGGTTCTGGCTAGTCTCCTCCCTCCCTTCAAAATGCGAAGCAAAAGGCAGGGAGAAGGTCTCCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635112.1 |
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| CDS GCA 72 bp | CCTCCACCCCATCCCTGCCTTGCCACGAGGATTAATTaGTCTCTAAGTGCCTTGGCCAATGTTGACTTTCAG | + |
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Preference number: 6 (lower is better) Translates to: PPPHPCLATRIN*SLSALANVDFQ Trigger: CTGAAAGTCAACATTGGCCAAGGCACTTAGAGAGCAATTAATCCTCGTGGCAAGGCAGGGATGGGGTGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635112.1 |
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| CDS GCA 72 bp | CATATCTGCAGCCCTGGCTGCTGCAGGGAAAGGCACTaGCTTTCTTCTCCAGGTGTCTTTTGTTCTTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: HICSPGCCRERH*LSSPGVFCSSS Trigger: GGAAGAAGAACAAAAGACACCTGGAGAAGAAAGGCAGTGCCTTTCCCTGCAGCAGCCAGGGCTGCAGATATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635112.1 |
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| CDS CCA 72 bp | TTTCTGGGGCCAGTGTGGGGGAAAGATGGTATGGAATaGGAGAATCCATCCTTCCTGCAAGAGGAGAAAGCC | + |
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Preference number: 6 (lower is better) Translates to: FLGPVWGKDGME*ENPSFLQEEKA Trigger: GGCTTTCTCCTCTTGCAGGAAGGATGGATTCTCCCATTCCATACCATCTTTCCCCCACACTGGCCCCAGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000423943.2 ENST00000443364.6 ENST00000657602.1 |
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| CDS CAA 90 bp | CCCCATCCCTGCCTTGCCACGAGGATTAATTGCTCTCTAAGTGCCTaGGCCAATGTTGACTTTCAGCCTAAGCTTGACCTCTCAAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: PHPCLATRINCSLSA*ANVDFQPKLDLSSK Trigger: CTTGCTTGAGAGGTCAAGCTTAGGCTGAAAGTCAACATTGGCCAAGGCACTTAGAGAGCAATTAATCCTCGTGGCAAGGCAGGGATGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635112.1 |
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| CDS TCA 72 bp | TCCAGGCTGGACTCAAACTCCTGGGCTCAAGGAATCTaGATAGTTAGGACTACAGGTGCTGGGCTCTGGATT | + |
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Preference number: 6 (lower is better) Translates to: SRLDSNSWAQGI*IVRTTGAGLWI Trigger: AATCCAGAGCCCAGCACCTGTAGTCCTAACTATTCAGATTCCTTGAGCCCAGGAGTTTGAGTCCAGCCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000423943.2 ENST00000443364.6 ENST00000657602.1 |
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| CDS TCA 72 bp | CACCTTGCCTTGGGGTCTGTCCTTGGTTACCACCACTaGTGTCTACCATGCTGGACTTTGGAGAACTTTGCT | + |
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Preference number: 6 (lower is better) Translates to: HLALGSVLGYHH*CLPCWTLENFA Trigger: AGCAAAGTTCTCCAAAGTCCAGCATGGTAGACATCAGTGGTGGTAACCAAGGACAGACCCCAAGGCAAGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000423943.2 ENST00000443364.6 ENST00000657602.1 |
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| CDS GCA 72 bp | CTATTCAAGTTCTGTCTGGGGACTCTGTCAGCCAGATaGAGTATCCAGGCAACCTTACAGAAGGAGCCTCGT | + |
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Preference number: 6 (lower is better) Translates to: LFKFCLGTLSAR*SIQATLQKEPR Trigger: ACGAGGCTCCTTCTGTAAGGTTGCCTGGATACTGCATCTGGCTGACAGAGTCCCCAGACAGAACTTGAATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443364.6 |
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| CDS GCA 72 bp | CATAGCGTCTTCTGTCTCCAACTCTGCTTTCCTCTCTaGTTCTGTCATCAGGGGGCTGCATCCTGCTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: HSVFCLQLCFPL*FCHQGAASCFS Trigger: AGAAAAGCAGGATGCAGCCCCCTGATGACAGAAGCAGAGAGGAAAGCAGAGTTGGAGACAGAAGACGCTATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000635112.1 |
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| CDS CAA 72 bp | AGGGCAGCTGGACTGCATAGACTTGAGGTTCCATTTTaGAGGTTCACCTTGCCTTGGGGTCTGTCCTTGGTT | + |
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Preference number: 6 (lower is better) Translates to: RAAGLHRLEVPF*RFTLPWGLSLV Trigger: AACCAAGGACAGACCCCAAGGCAAGGTGAACCTCAAAAATGGAACCTCAAGTCTATGCAGTCCAGCTGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000423943.2 ENST00000443364.6 ENST00000657602.1 |
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| CDS CAA 90 bp | GCAGCTGGACTGCATAGACTTGAGGTTCCATTTTTGAGGTTCACCTaGCCTTGGGGTCTGTCCTTGGTTACCACCACTGATGTCTACCAT | + |
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Preference number: 6 (lower is better) Translates to: AAGLHRLEVPFLRFT*PWGLSLVTTTDVYH Trigger: ATGGTAGACATCAGTGGTGGTAACCAAGGACAGACCCCAAGGCAAGGTGAACCTCAAAAATGGAACCTCAAGTCTATGCAGTCCAGCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000423943.2 ENST00000443364.6 ENST00000657602.1 |
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| CDS GCA 72 bp | AATTGGGGTGTGGGTCTGATTTCTCATTGGCTTAATTaGTCTGTAGCAGCCTCGGCTCCCCCTTCAAGAGTA | + |
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Preference number: 6 (lower is better) Translates to: NWGVGLISHWLN*SVAASAPPSRV Trigger: TACTCTTGAAGGGGGAGCCGAGGCTGCTACAGAGCAATTAAGCCAATGAGAAATCAGACCCACACCCCAATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657602.1 |
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| CDS CCA 72 bp | TTACATCAGAATTGGGGTGTGGGTCTGATTTCTCATTaGCTTAATTGCTCTGTAGCAGCCTCGGCTCCCCCT | + |
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Preference number: 6 (lower is better) Translates to: LHQNWGVGLISH*LNCSVAASAPP Trigger: AGGGGGAGCCGAGGCTGCTACAGAGCAATTAAGCCAATGAGAAATCAGACCCACACCCCAATTCTGATGTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000657602.1 |
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| CDS CAA 72 bp | CCATTTTTGAGGTTCACCTTGCCTTGGGGTCTGTCCTaGGTTACCACCACTGATGTCTACCATGCTGGACTT | + |
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Preference number: 6 (lower is better) Translates to: PFLRFTLPWGLS*VTTTDVYHAGL Trigger: AAGTCCAGCATGGTAGACATCAGTGGTGGTAACCAAGGACAGACCCCAAGGCAAGGTGAACCTCAAAAATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000423943.2 ENST00000443364.6 ENST00000657602.1 |
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| CDS CAA 72 bp | CCAAGGAGTGGTCAGAAATCCACTCCTCGGGGGAATTaGATCTCTTGCTTTTCTTGGCAACTTGAGGACCCT | + |
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Preference number: 6 (lower is better) Translates to: PRSGQKSTPRGN*ISCFSWQLEDP Trigger: AGGGTCCTCAAGTTGCCAAGAAAAGCAAGAGATCAAATTCCCCCGAGGAGTGGATTTCTGACCACTCCTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000635112.1 |
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| CDS CAA 90 bp | CTTGAGGTTCCATTTTTGAGGTTCACCTTGCCTTGGGGTCTGTCCTaGGTTACCACCACTGATGTCTACCATGCTGGACTTTGGAGAACT | + |
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Preference number: 6 (lower is better) Translates to: LEVPFLRFTLPWGLS*VTTTDVYHAGLWRT Trigger: AGTTCTCCAAAGTCCAGCATGGTAGACATCAGTGGTGGTAACCAAGGACAGACCCCAAGGCAAGGTGAACCTCAAAAATGGAACCTCAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000423943.2 ENST00000443364.6 ENST00000657602.1 |
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| CDS GCA 72 bp | CCACTGATGTCTACCATGCTGGACTTTGGAGAACTTTaGTTCCACTTCAGCACACCTTGGTACCTTCAGTCA | + |
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Preference number: 6 (lower is better) Translates to: PLMSTMLDFGEL*FHFSTPWYLQS Trigger: TGACTGAAGGTACCAAGGTGTGCTGAAGTGGAAGCAAAGTTCTCCAAAGTCCAGCATGGTAGACATCAGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000423943.2 ENST00000443364.6 ENST00000657602.1 |
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| CDS CCA 72 bp | AGACTTGAGGTTCCATTTTTGAGGTTCACCTTGCCTTaGGGTCTGTCCTTGGTTACCACCACTGATGTCTAC | + |
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Preference number: 6 (lower is better) Translates to: RLEVPFLRFTLP*GLSLVTTTDVY Trigger: GTAGACATCAGTGGTGGTAACCAAGGACAGACCCCAAGGCAAGGTGAACCTCAAAAATGGAACCTCAAGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000423943.2 ENST00000443364.6 ENST00000657602.1 |
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| CDS CAA 72 bp | ACCACTGATGTCTACCATGCTGGACTTTGGAGAACTTaGCTTCCACTTCAGCACACCTTGGTACCTTCAGTC | + |
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Preference number: 6 (lower is better) Translates to: TTDVYHAGLWRT*LPLQHTLVPSV Trigger: GACTGAAGGTACCAAGGTGTGCTGAAGTGGAAGCAAAGTTCTCCAAAGTCCAGCATGGTAGACATCAGTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000423943.2 ENST00000443364.6 ENST00000657602.1 |
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| CDS CAA 72 bp | TGCCTTGCCACGAGGATTAATTGCTCTCTAAGTGCCTaGGCCAATGTTGACTTTCAGCCTAAGCTTGACCTC | + |
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Preference number: 6 (lower is better) Translates to: CLATRINCSLSA*ANVDFQPKLDL Trigger: GAGGTCAAGCTTAGGCTGAAAGTCAACATTGGCCAAGGCACTTAGAGAGCAATTAATCCTCGTGGCAAGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635112.1 |
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| CDS TCA 72 bp | GATGAAGAGGCACAGATGGATGCCTCTTTCATCTGGTaGACTGATAGAAGTGCTGTGATGAACCTCCACAGT | + |
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Preference number: 6 (lower is better) Translates to: DEEAQMDASFIW*TDRSAVMNLHS Trigger: ACTGTGGAGGTTCATCACAGCACTTCTATCAGTTCACCAGATGAAAGAGGCATCCATCTGTGCCTCTTCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635112.1 |
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| CDS GCA 72 bp | CTTATTAGAAAAATGAGGTGGGTGGTGTGGGCCCATTaGAAAAGGAGAGTCATAGAAGTACACACCCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: LIRKMRWVVWAH*KRRVIEVHTLA Trigger: TGCCAGGGTGTGTACTTCTATGACTCTCCTTTTGCAATGGGCCCACACCACCCACCTCATTTTTCTAATAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000443364.6 |
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| CDS CCA 72 bp | GAATTAAGTATTTCTGGGGCCAGTGTGGGGGAAAGATaGTATGGAATGGGAGAATCCATCCTTCCTGCAAGA | + |
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Preference number: 6 (lower is better) Translates to: ELSISGASVGER*YGMGESILPAR Trigger: TCTTGCAGGAAGGATGGATTCTCCCATTCCATACCATCTTTCCCCCACACTGGCCCCAGAAATACTTAATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000423943.2 ENST00000443364.6 ENST00000657602.1 |
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| CDS CAA 90 bp | TTGGTTACCACCACTGATGTCTACCATGCTGGACTTTGGAGAACTTaGCTTCCACTTCAGCACACCTTGGTACCTTCAGTCAAGCTTTTA | + |
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Preference number: 6 (lower is better) Translates to: LVTTTDVYHAGLWRT*LPLQHTLVPSVKLL Trigger: TAAAAGCTTGACTGAAGGTACCAAGGTGTGCTGAAGTGGAAGCAAAGTTCTCCAAAGTCCAGCATGGTAGACATCAGTGGTGGTAACCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000423943.2 ENST00000443364.6 ENST00000657602.1 |
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| CDS TCA 72 bp | TCTTCCTTTGTTTCTAGTAAACAAACTCAGAGGCACTaGTGTTGGGCTGGAACAAGGACTTTCTGGTGGGGA | + |
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Preference number: 6 (lower is better) Translates to: SSFVSSKQTQRH*CWAGTRTFWWG Trigger: TCCCCACCAGAAAGTCCTTGTTCCAGCCCAACATCAGTGCCTCTGAGTTTGTTTACTAGAAACAAAGGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000423943.2 ENST00000443364.6 ENST00000657602.1 |
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| CDS GCA 72 bp | TTTCCTCTCTGCTTCTGTCATCAGGGGGCTGCATCCTaGTTTTCTCTTAGAAGGACTCTTGTGATTACATCA | + |
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Preference number: 6 (lower is better) Translates to: FPLCFCHQGAAS*FSLRRTLVITS Trigger: TGATGTAATCACAAGAGTCCTTCTAAGAGAAAAGCAGGATGCAGCCCCCTGATGACAGAAGCAGAGAGGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000635112.1 |
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| CDS CCA 72 bp | GAAACCCAGTTCCTTAGAATCTTCAGTTGCAGGGAATaGATCCATTCTCAGGTAACTTCAAGAAAGAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: ETQFLRIFSCRE*IHSQVTSRKRG Trigger: ACCTCTCTTTCTTGAAGTTACCTGAGAATGGATCCATTCCCTGCAACTGAAGATTCTAAGGAACTGGGTTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000423943.2 ENST00000443364.6 ENST00000657602.1 |
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| CDS CCA 72 bp | TTGAAAGCTCTTATTAGAAAAATGAGGTGGGTGGTGTaGGCCCATTGCAAAAGGAGAGTCATAGAAGTACAC | + |
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Preference number: 6 (lower is better) Translates to: LKALIRKMRWVV*AHCKRRVIEVH Trigger: GTGTACTTCTATGACTCTCCTTTTGCAATGGGCCCACACCACCCACCTCATTTTTCTAATAAGAGCTTTCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000443364.6 |
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| CDS CAA 72 bp | CAGCTTTCCAGATCCAAAGGGAAGCTAAGGAGAAAGTaGGAGCAAAGGTTTGGCCTTTTATTATCTTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: QLSRSKGKLRRK*EQRFGLLLSFL Trigger: GAGGAAAGATAATAAAAGGCCAAACCTTTGCTCCAACTTTCTCCTTAGCTTCCCTTTGGATCTGGAAAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000423943.2 ENST00000443364.6 ENST00000657602.1 |
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| CDS CAA 90 bp | AGGGAATGGATCCATTCTCAGGTAACTTCAAGAAAGAGAGGTTTATaGAAAGCTCTTATTAGAAAAATGAGGTGGGTGGTGTGGGCCCAT | + |
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Preference number: 6 (lower is better) Translates to: REWIHSQVTSRKRGL*KALIRKMRWVVWAH Trigger: ATGGGCCCACACCACCCACCTCATTTTTCTAATAAGAGCTTTCAATAAACCTCTCTTTCTTGAAGTTACCTGAGAATGGATCCATTCCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000443364.6 |
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| CDS CCA 72 bp | AGAGGTTTATTGAAAGCTCTTATTAGAAAAATGAGGTaGGTGGTGTGGGCCCATTGCAAAAGGAGAGTCATA | + |
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Preference number: 6 (lower is better) Translates to: RGLLKALIRKMR*VVWAHCKRRVI Trigger: TATGACTCTCCTTTTGCAATGGGCCCACACCACCCACCTCATTTTTCTAATAAGAGCTTTCAATAAACCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000443364.6 |
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| CDS CAA 72 bp | ATCCATTCTCAGGTAACTTCAAGAAAGAGAGGTTTATaGAAAGCTCTTATTAGAAAAATGAGGTGGGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: IHSQVTSRKRGL*KALIRKMRWVV Trigger: CACCACCCACCTCATTTTTCTAATAAGAGCTTTCAATAAACCTCTCTTTCTTGAAGTTACCTGAGAATGGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000443364.6 |
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| CDS GCA 72 bp | TTACATGTATTGAATCAAGCAACACTCCAAGGCAGCTaGTATTTACTGAAGAATACAAGTGTATTCTTTGGT | + |
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Preference number: 6 (lower is better) Translates to: LHVLNQATLQGS*YLLKNTSVFFG Trigger: ACCAAAGAATACACTTGTATTCTTCAGTAAATAGCAGCTGCCTTGGAGTGTTGCTTGATTCAATACATGTAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635112.1 |
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