Pregenerated sensors for LINC01132 (Homo sapiens)
Ensembl gene IDs: ENSG00000227630Ensembl transcript IDs: ENST00000437601.2, ENST00000641214.1, ENST00000642107.1, ENST00000662158.1
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCTCAGGTCCCAGGGCTCCGTGGGACCCAGGACCCCCGAACAGCCTaGAACCCTACGACGACGGCCTGGCCATGCTCCAGCAGCAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PQVPGLRGTQDPRTA*NPTTTAWPCSSSRQ Trigger: CTGCCTGCTGCTGGAGCATGGCCAGGCCGTCGTCGTAGGGTTGCAGGCTGTTCGGGGGTCCTGGGTCCCACGGAGCCCTGGGACCTGAGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000642107.1 ENST00000662158.1 |
||
| CDS CCA 90 bp | GGGACCCAGGACCCCCGAACAGCCTGCAACCCTACGACGACGGCCTaGCCATGCTCCAGCAGCAGGCAGAGGCTTGGGCCACAGCCACGT | + |
|
Preference number: 5 (lower is better) Translates to: GTQDPRTACNPTTTA*PCSSSRQRLGPQPR Trigger: ACGTGGCTGTGGCCCAAGCCTCTGCCTGCTGCTGGAGCATGGCCAGGCCGTCGTCGTAGGGTTGCAGGCTGTTCGGGGGTCCTGGGTCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000642107.1 ENST00000662158.1 |
||
| CDS GCA 90 bp | CAGGACCCCCGAACAGCCTGCAACCCTACGACGACGGCCTGGCCATaGTCCAGCAGCAGGCAGAGGCTTGGGCCACAGCCACGTACTGGC | + |
|
Preference number: 5 (lower is better) Translates to: QDPRTACNPTTTAWP*SSSRQRLGPQPRTG Trigger: GCCAGTACGTGGCTGTGGCCCAAGCCTCTGCCTGCTGCTGGAGCATGGCCAGGCCGTCGTCGTAGGGTTGCAGGCTGTTCGGGGGTCCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000642107.1 ENST00000662158.1 |
||
| CDS TCA 90 bp | CCTGAGCTCCCTGAGGTTGCAGGTGCTCTGGGGCCTGCAATTTGGTaGGCCTGTGCCATAAGCCGCCCCTGGAGGGAGCAGAGGCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: PELPEVAGALGPAIW*ACAISRPWREQRQK Trigger: TTTCTGCCTCTGCTCCCTCCAGGGGCGGCTTATGGCACAGGCTCACCAAATTGCAGGCCCCAGAGCACCTGCAACCTCAGGGAGCTCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS TCA 90 bp | GTCTGCTTGCAGGCCCTTTCTTCGCTGGGATGGTGGATGGCTCGGTaGGACATCAGAGAGCAACTGCTCAGGTGGGTCTGCGTGGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VCLQALSSLGWWMAR*DIREQLLRWVCVAL Trigger: CAGGGCCACGCAGACCCACCTGAGCAGTTGCTCTCTGATGTCTCACCGAGCCATCCACCATCCCAGCGAAGAAAGGGCCTGCAAGCAGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS GCA 90 bp | GCTGCTCTGAGGATGCAAACGGCACTGGAGAGGAGATGGGCGCTTTaGAGACTCTGGGCCCCTAGTGAAGGAGAGAACCGTGGGCGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: AALRMQTALERRWAL*RLWAPSEGENRGRG Trigger: TCCTCGCCCACGGTTCTCTCCTTCACTAGGGGCCCAGAGTCTGCAAAGCGCCCATCTCCTCTCCAGTGCCGTTTGCATCCTCAGAGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641214.1 |
||
| CDS CCA 90 bp | AGGATGCAAACGGCACTGGAGAGGAGATGGGCGCTTTGCAGACTCTaGGCCCCTAGTGAAGGAGAGAACCGTGGGCGAGGAGGACCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RMQTALERRWALCRL*APSEGENRGRGGPA Trigger: TGCTGGTCCTCCTCGCCCACGGTTCTCTCCTTCACTAGGGGCCCAGAGTCTGCAAAGCGCCCATCTCCTCTCCAGTGCCGTTTGCATCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641214.1 |
||
| CDS CCA 90 bp | AGGTGCGGCGCTGCTCTGAGGATGCAAACGGCACTGGAGAGGAGATaGGCGCTTTGCAGACTCTGGGCCCCTAGTGAAGGAGAGAACCGT | + |
|
Preference number: 5 (lower is better) Translates to: RCGAALRMQTALERR*ALCRLWAPSEGENR Trigger: ACGGTTCTCTCCTTCACTAGGGGCCCAGAGTCTGCAAAGCGCCCATCTCCTCTCCAGTGCCGTTTGCATCCTCAGAGCAGCGCCGCACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641214.1 |
||
| CDS GCA 90 bp | GGCAGGAATTGGGAGCCCGCTGCGAGGACTTCCCTGAGTTCAGACTaGGCAGCTCAACTCATGCCTTTCAGGGGCTCATCCATTCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GRNWEPAARTSLSSD*AAQLMPFRGSSILL Trigger: CAGCAGAATGGATGAGCCCCTGAAAGGCATGAGTTGAGCTGCGCAGTCTGAACTCAGGGAAGTCCTCGCAGCGGGCTCCCAATTCCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS CCA 90 bp | CCTCTTCCCAACCCCACTGCTGCCTTGGAGAGGCTGACTCTTAGGTaGAGCAGAGTCTGTCCTGGGCCAGGCAGAACACAGTTGCTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: PLPNPTAALERLTLR*SRVCPGPGRTQLLQ Trigger: TTGCAGCAACTGTGTTCTGCCTGGCCCAGGACAGACTCTGCTCCACCTAAGAGTCAGCCTCTCCAAGGCAGCAGTGGGGTTGGGAAGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS GCA 90 bp | CAAGATGTCCTGAAATGTAGCTTGAGCTGGCTCTGTAGGAGCTGGTaGAGCATGGAGGTCCCTCCTCCCCTCTTCCCAACCCCACTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QDVLKCSLSWLCRSW*SMEVPPPLFPTPLL Trigger: CAGCAGTGGGGTTGGGAAGAGGGGAGGAGGGACCTCCATGCTGCACCAGCTCCTACAGAGCCAGCTCAAGCTACATTTCAGGACATCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS GCA 90 bp | TTAAGGCTCAGCTTGCTTCTTGAGAGGCAGGAATTGGGAGCCCGCTaGGAGGACTTCCCTGAGTTCAGACTGCGCAGCTCAACTCATGCC | + |
|
Preference number: 5 (lower is better) Translates to: LRLSLLLERQELGAR*EDFPEFRLRSSTHA Trigger: GGCATGAGTTGAGCTGCGCAGTCTGAACTCAGGGAAGTCCTCGCAGCGGGCTCCCAATTCCTGCCTCTCAAGAAGCAAGCTGAGCCTTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS GCA 90 bp | CCTTGGGTGAATCAGGATGCCTCTAACAAGTTCAAGGTGCGGCGCTaGTCTGAGGATGCAAACGGCACTGGAGAGGAGATGGGCGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: PWVNQDASNKFKVRR*SEDANGTGEEMGAL Trigger: CAAAGCGCCCATCTCCTCTCCAGTGCCGTTTGCATCCTCAGAGCAGCGCCGCACCTTGAACTTGTTAGAGGCATCCTGATTCACCCAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641214.1 |
||
| CDS CCA 90 bp | ATTTTCTGGTCTGCTTGCAGGCCCTTTCTTCGCTGGGATGGTGGATaGCTCGGTGAGACATCAGAGAGCAACTGCTCAGGTGGGTCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: IFWSACRPFLRWDGG*LGETSESNCSGGSA Trigger: CGCAGACCCACCTGAGCAGTTGCTCTCTGATGTCTCACCGAGCCATCCACCATCCCAGCGAAGAAAGGGCCTGCAAGCAGACCAGAAAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS CCA 90 bp | CCTTTGGCTAGCAGGAAGAATAGACAGGCCCTGGCACCACATCAGTaGCCCCGACACCTCAGGGAAGTCCATTCAGTGAGGCCTTCATTT | + |
|
Preference number: 5 (lower is better) Translates to: PLASRKNRQALAPHQ*PRHLREVHSVRPSF Trigger: AAATGAAGGCCTCACTGAATGGACTTCCCTGAGGTGTCGGGGCCACTGATGTGGTGCCAGGGCCTGTCTATTCTTCCTGCTAGCCAAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS CCA 90 bp | TTGTCCAGAAGTAGCCTCCAAGATGTCCTGAAATGTAGCTTGAGCTaGCTCTGTAGGAGCTGGTGCAGCATGGAGGTCCCTCCTCCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LSRSSLQDVLKCSLS*LCRSWCSMEVPPPL Trigger: GAGGGGAGGAGGGACCTCCATGCTGCACCAGCTCCTACAGAGCCAGCTCAAGCTACATTTCAGGACATCTTGGAGGCTACTTCTGGACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS CCA 90 bp | TGGGCGAGGAGGACCAGCAGTTTCCAGGAGGCATTCGGAATAGGGTaGGAGGGAAGAGAATCGACCAGACTGCTTATTTGGCTCTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: WARRTSSFQEAFGIG*EGRESTRLLIWLSL Trigger: CAGTGAGAGCCAAATAAGCAGTCTGGTCGATTCTCTTCCCTCCCACCCTATTCCGAATGCCTCCTGGAAACTGCTGGTCCTCCTCGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641214.1 |
||
| CDS CCA 90 bp | TCAGTGCCTGGCTTGCGGTCACAGGAGATACTTCTACTGCCATTCTaGCTTGGGCTTCTTTGGAGAAGGAGCCAAGGCCTGCAAGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SVPGLRSQEILLLPF*LGLLWRRSQGLQGF Trigger: AAACCCTTGCAGGCCTTGGCTCCTTCTCCAAAGAAGCCCAAGCCAGAATGGCAGTAGAAGTATCTCCTGTGACCGCAAGCCAGGCACTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS CCA 90 bp | ACTGAATGGGGCATTTTCTGGTCTGCTTGCAGGCCCTTTCTTCGCTaGGATGGTGGATGGCTCGGTGAGACATCAGAGAGCAACTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: TEWGIFWSACRPFLR*DGGWLGETSESNCS Trigger: TGAGCAGTTGCTCTCTGATGTCTCACCGAGCCATCCACCATCCCAGCGAAGAAAGGGCCTGCAAGCAGACCAGAAAATGCCCCATTCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS GCA 90 bp | TTAGGTGGAGCAGAGTCTGTCCTGGGCCAGGCAGAACACAGTTGCTaGAACCTGATGTGCAGGTGTTGCAATAAATGTCTCTGGGGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LGGAESVLGQAEHSC*NLMCRCCNKCLWGH Trigger: GTGACCCCAGAGACATTTATTGCAACACCTGCACATCAGGTTGCAGCAACTGTGTTCTGCCTGGCCCAGGACAGACTCTGCTCCACCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS GCA 90 bp | CTCTTAGGTGGAGCAGAGTCTGTCCTGGGCCAGGCAGAACACAGTTaGTGCAACCTGATGTGCAGGTGTTGCAATAAATGTCTCTGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LLGGAESVLGQAEHS*CNLMCRCCNKCLWG Trigger: ACCCCAGAGACATTTATTGCAACACCTGCACATCAGGTTGCAGCAACTGTGTTCTGCCTGGCCCAGGACAGACTCTGCTCCACCTAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS CCA 90 bp | GCCTGGCTTGCGGTCACAGGAGATACTTCTACTGCCATTCTGGCTTaGGCTTCTTTGGAGAAGGAGCCAAGGCCTGCAAGGGTTTTAAGT | + |
|
Preference number: 5 (lower is better) Translates to: AWLAVTGDTSTAILA*ASLEKEPRPARVLS Trigger: ACTTAAAACCCTTGCAGGCCTTGGCTCCTTCTCCAAAGAAGCCCAAGCCAGAATGGCAGTAGAAGTATCTCCTGTGACCGCAAGCCAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS TCA 90 bp | GGTGAGACATCAGAGAGCAACTGCTCAGGTGGGTCTGCGTGGCCCTaGGACTGTTCACATTTTCAGCCATCTTTAAGGCTCAGCTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GETSESNCSGGSAWP*DCSHFQPSLRLSLL Trigger: AAGCAAGCTGAGCCTTAAAGATGGCTGAAAATGTGAACAGTCTCAGGGCCACGCAGACCCACCTGAGCAGTTGCTCTCTGATGTCTCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS GCA 90 bp | GGGCTGTTCAGAGGGCCAGCTGTGGTCCATCTGAAGGTGACAATTTaGCAATTTGTTTTACAGGAAGGCTGCCATGGGCCTCACAATAGC | + |
|
Preference number: 5 (lower is better) Translates to: GLFRGPAVVHLKVTI*QFVLQEGCHGPHNS Trigger: GCTATTGTGAGGCCCATGGCAGCCTTCCTGTAAAACAAATTGGCAAATTGTCACCTTCAGATGGACCACAGCTGGCCCTCTGAACAGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000437601.2 ENST00000641214.1 ENST00000642107.1 ENST00000662158.1 |
||
| CDS CCA 90 bp | CATGCTCTGGTAGAGTTCCTGAGTGCTTCCTGTTTTGGAATGCGGTaGCGTCTGGCCTCCTCACTGTTTGTTCAGCATGCATTACCATGC | + |
|
Preference number: 5 (lower is better) Translates to: HALVEFLSASCFGMR*RLASSLFVQHALPC Trigger: GCATGGTAATGCATGCTGAACAAACAGTGAGGAGGCCAGACGCCACCGCATTCCAAAACAGGAAGCACTCAGGAACTCTACCAGAGCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS CCA 90 bp | CACAGTTGCTGCAACCTGATGTGCAGGTGTTGCAATAAATGTCTCTaGGGTCACTGCAGACAAGGACCGACTGTATACCTGGTGGGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: HSCCNLMCRCCNKCL*GHCRQGPTVYLVGL Trigger: GAGACCCACCAGGTATACAGTCGGTCCTTGTCTGCAGTGACCCCAGAGACATTTATTGCAACACCTGCACATCAGGTTGCAGCAACTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS TCA 90 bp | GTCTTGTCCCAGGATTATCACGAACAGGCAGGTGAAAGCACTGGGTaGCATGAGCACAGATTTATGCACCAGGACTCACTCTGTGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: VLSQDYHEQAGESTG*HEHRFMHQDSLCGK Trigger: CTTGCCACAGAGTGAGTCCTGGTGCATAAATCTGTGCTCATGTCACCCAGTGCTTTCACCTGCCTGTTCGTGATAATCCTGGGACAAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS GCA 90 bp | ACATACAGAAGGACCAGGAAGCAACCTAAGAATCAGTGCCTGGCTTaGGGTCACAGGAGATACTTCTACTGCCATTCTGGCTTGGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TYRRTRKQPKNQCLA*GHRRYFYCHSGLGF Trigger: GAAGCCCAAGCCAGAATGGCAGTAGAAGTATCTCCTGTGACCGCAAGCCAGGCACTGATTCTTAGGTTGCTTCCTGGTCCTTCTGTATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS TCA 90 bp | GGCCTGGTTCCTGCTCTATTCCATCTTCTCTGCATTATAAGATCCTaGGCTTTAGACCATCCACCCCAGGGTCTGTGCATCTGTAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GLVPALFHLLCIIRS*ALDHPPQGLCICRR Trigger: TCTCCTACAGATGCACAGACCCTGGGGTGGATGGTCTAAAGCTCAGGATCTTATAATGCAGAGAAGATGGAATAGAGCAGGAACCAGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS CCA 90 bp | GCAATACATACAGAAGGACCAGGAAGCAACCTAAGAATCAGTGCCTaGCTTGCGGTCACAGGAGATACTTCTACTGCCATTCTGGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: AIHTEGPGSNLRISA*LAVTGDTSTAILAW Trigger: CCAAGCCAGAATGGCAGTAGAAGTATCTCCTGTGACCGCAAGCCAGGCACTGATTCTTAGGTTGCTTCCTGGTCCTTCTGTATGTATTGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS TCA 90 bp | CTTTGCTTCGGAAACCTGCCAACTCTCTGCCTGGAGACTTGCCTTTaGTCACGACTTGTCACCTTTCAGGAGATGTTCCACTTTTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LCFGNLPTLCLETCL*SRLVTFQEMFHFFL Trigger: CAGGAAAAAGTGGAACATCTCCTGAAAGGTGACAAGTCGTGATCAAAGGCAAGTCTCCAGGCAGAGAGTTGGCAGGTTTCCGAAGCAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS TCA 90 bp | CTTTGCTTCGGAAACCTGCCAACTCTCTGCCTGGAGACTTGCCTTTaGTCACGACTTGTCACCTTTCAGGAGATGTTCCACTTTCTAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LCFGNLPTLCLETCL*SRLVTFQEMFHFLS Trigger: GCTTAGAAAGTGGAACATCTCCTGAAAGGTGACAAGTCGTGATCAAAGGCAAGTCTCCAGGCAGAGAGTTGGCAGGTTTCCGAAGCAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000642107.1 ENST00000662158.1 |
||
| CDS GCA 90 bp | CTTAGCAATACATACAGAAGGACCAGGAAGCAACCTAAGAATCAGTaGCTGGCTTGCGGTCACAGGAGATACTTCTACTGCCATTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LSNTYRRTRKQPKNQ*LACGHRRYFYCHSG Trigger: GCCAGAATGGCAGTAGAAGTATCTCCTGTGACCGCAAGCCAGGCACTGATTCTTAGGTTGCTTCCTGGTCCTTCTGTATGTATTGCTAAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS TCA 90 bp | ACATGCATGAAGTGGACACAAATCTCTGCAGCAGAAACCAGCCTGTaGCTTTCTTTGGAGCCACGTCACCTGCCTAAACTAAATTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TCMKWTQISAAETSL*LSLEPRHLPKLNSS Trigger: GCTGGAATTTAGTTTAGGCAGGTGACGTGGCTCCAAAGAAAGTCACAGGCTGGTTTCTGCTGCAGAGATTTGTGTCCACTTCATGCATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS CCA 90 bp | AAGGACCGACTGTATACCTGGTGGGTCTCAGCAGGAAATCCCTCCTaGAGACTAGGCACTCTTCCCCTTCATCAATTGTCATATTTACAA | + |
|
Preference number: 5 (lower is better) Translates to: KDRLYTWWVSAGNPS*RLGTLPLHQLSYLQ Trigger: TTGTAAATATGACAATTGATGAAGGGGAAGAGTGCCTAGTCTCCAGGAGGGATTTCCTGCTGAGACCCACCAGGTATACAGTCGGTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS TCA 90 bp | CCTTTGCTGTGGCTTCATATAGAGTTAACGGGCAATAAACATGCATaGAGTGGACACAAATCTCTGCAGCAGAAACCAGCCTGTGACTTT | + |
|
Preference number: 5 (lower is better) Translates to: PLLWLHIELTGNKHA*SGHKSLQQKPACDF Trigger: AAAGTCACAGGCTGGTTTCTGCTGCAGAGATTTGTGTCCACTTCATGCATGTTTATTGCCCGTTAACTCTATATGAAGCCACAGCAAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS GCA 90 bp | TTGTTGTTGTTATTGGTTCCTTCCTCCAGACAGGGGCCTGGTTCCTaGTCTATTCCATCTTCTCTGCATTATAAGATCCTGAGCTTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: LLLLLVPSSRQGPGS*SIPSSLHYKILSFR Trigger: TCTAAAGCTCAGGATCTTATAATGCAGAGAAGATGGAATAGAGCAGGAACCAGGCCCCTGTCTGGAGGAAGGAACCAATAACAACAACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS TCA 90 bp | GAGGGGGAAAAACCAGCATTAGAAATGAAAGATCACAGGAGAAATTaGGCAGGTCACCTGTTTGCAAATAGTTTCTGCTTTAGGTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: EGEKPALEMKDHRRN*AGHLFANSFCFRSL Trigger: CAGAGACCTAAAGCAGAAACTATTTGCAAACAGGTGACCTGCTCAATTTCTCCTGTGATCTTTCATTTCTAATGCTGGTTTTTCCCCCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000642107.1 ENST00000662158.1 |
||
| CDS CCA 90 bp | TTCTTGCATTTATTCACAAGTGAATATGCGAGAAAGAATGATTGTTaGATTCTCATTATTTGTCATCAGTTGAGGCCGTGGGCCTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: FLHLFTSEYARKNDC*ILIICHQLRPWAWV Trigger: GACCCAGGCCCACGGCCTCAACTGATGACAAATAATGAGAATCCAACAATCATTCTTTCTCGCATATTCACTTGTGAATAAATGCAAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS TCA 90 bp | TGCAGTTATAAGGAGATGGAGATAATATGCATGTTTGCCTTCTTCTaGTTATGTACAGTGTCATTTCGCCAAAAATCTACACCAGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: CSYKEMEIICMFAFF*LCTVSFRQKSTPAT Trigger: TGTGGCTGGTGTAGATTTTTGGCGAAATGACACTGTACATAATCAGAAGAAGGCAAACATGCATATTATCTCCATCTCCTTATAACTGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS GCA 72 bp | CCAGGGCTCCGTGGGACCCAGGACCCCCGAACAGCCTaGAACCCTACGACGACGGCCTGGCCATGCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PGLRGTQDPRTA*NPTTTAWPCSS Trigger: GCTGGAGCATGGCCAGGCCGTCGTCGTAGGGTTGCAGGCTGTTCGGGGGTCCTGGGTCCCACGGAGCCCTGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000642107.1 ENST00000662158.1 |
||
| CDS GCA 72 bp | CGAACAGCCTGCAACCCTACGACGACGGCCTGGCCATaGTCCAGCAGCAGGCAGAGGCTTGGGCCACAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RTACNPTTTAWP*SSSRQRLGPQP Trigger: TGGCTGTGGCCCAAGCCTCTGCCTGCTGCTGGAGCATGGCCAGGCCGTCGTCGTAGGGTTGCAGGCTGTTCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000642107.1 ENST00000662158.1 |
||
| CDS TCA 72 bp | CCTGAGGTTGCAGGTGCTCTGGGGCCTGCAATTTGGTaGGCCTGTGCCATAAGCCGCCCCTGGAGGGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PEVAGALGPAIW*ACAISRPWREQ Trigger: CTGCTCCCTCCAGGGGCGGCTTATGGCACAGGCTCACCAAATTGCAGGCCCCAGAGCACCTGCAACCTCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS CCA 72 bp | ACGGCACTGGAGAGGAGATGGGCGCTTTGCAGACTCTaGGCCCCTAGTGAAGGAGAGAACCGTGGGCGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: TALERRWALCRL*APSEGENRGRG Trigger: TCCTCGCCCACGGTTCTCTCCTTCACTAGGGGCCCAGAGTCTGCAAAGCGCCCATCTCCTCTCCAGTGCCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641214.1 |
||
| CDS GCA 72 bp | AAGGAGCCAAGGCCTGCAAGGGTTTTAAGTGGCCCCTaGAGGTTCACTCTGACCCACCTCAGAGACGCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: KEPRPARVLSGP*RFTLTHLRDAP Trigger: GGGGGCGTCTCTGAGGTGGGTCAGAGTGAACCTGCAGGGGCCACTTAAAACCCTTGCAGGCCTTGGCTCCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS GCA 72 bp | TGGGAGCCCGCTGCGAGGACTTCCCTGAGTTCAGACTaGGCAGCTCAACTCATGCCTTTCAGGGGCTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: WEPAARTSLSSD*AAQLMPFRGSS Trigger: GGATGAGCCCCTGAAAGGCATGAGTTGAGCTGCGCAGTCTGAACTCAGGGAAGTCCTCGCAGCGGGCTCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS CCA 72 bp | GCCAGCCTTTGGCTAGCAGGAAGAATAGACAGGCCCTaGCACCACATCAGTGGCCCCGACACCTCAGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: ASLWLAGRIDRP*HHISGPDTSGK Trigger: CTTCCCTGAGGTGTCGGGGCCACTGATGTGGTGCCAGGGCCTGTCTATTCTTCCTGCTAGCCAAAGGCTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS TCA 72 bp | ATGGCGGCCACAGCCCTGTGGCCTTCCAGGATGTCATaGGGTATCCACATGGCCTTACACACATGGGTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: MAATALWPSRMS*GIHMALHTWVA Trigger: TGCCACCCATGTGTGTAAGGCCATGTGGATACCTCATGACATCCTGGAAGGCCACAGGGCTGTGGCCGCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS TCA 72 bp | GAGGCAGGAATTGGGAGCCCGCTGCGAGGACTTCCCTaGGTTCAGACTGCGCAGCTCAACTCATGCCTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: EAGIGSPLRGLP*VQTAQLNSCLS Trigger: TGAAAGGCATGAGTTGAGCTGCGCAGTCTGAACTCAGGGAAGTCCTCGCAGCGGGCTCCCAATTCCTGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS CCA 72 bp | AGCAGGAAGAATAGACAGGCCCTGGCACCACATCAGTaGCCCCGACACCTCAGGGAAGTCCATTCAGTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SRKNRQALAPHQ*PRHLREVHSVR Trigger: CCTCACTGAATGGACTTCCCTGAGGTGTCGGGGCCACTGATGTGGTGCCAGGGCCTGTCTATTCTTCCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS CAA 72 bp | GCTCCCCATTCATCCAGCGGCTTGAGAAGCCAGCCTTaGGCTAGCAGGAAGAATAGACAGGCCCTGGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: APHSSSGLRSQP*ASRKNRQALAP Trigger: TGGTGCCAGGGCCTGTCTATTCTTCCTGCTAGCCAAAGGCTGGCTTCTCAAGCCGCTGGATGAATGGGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS CCA 72 bp | TCTGCTTGCAGGCCCTTTCTTCGCTGGGATGGTGGATaGCTCGGTGAGACATCAGAGAGCAACTGCTCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: SACRPFLRWDGG*LGETSESNCSG Trigger: ACCTGAGCAGTTGCTCTCTGATGTCTCACCGAGCCATCCACCATCCCAGCGAAGAAAGGGCCTGCAAGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS CAA 90 bp | GCGGTCACAGGAGATACTTCTACTGCCATTCTGGCTTGGGCTTCTTaGGAGAAGGAGCCAAGGCCTGCAAGGGTTTTAAGTGGCCCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: AVTGDTSTAILAWAS*EKEPRPARVLSGPC Trigger: GCAGGGGCCACTTAAAACCCTTGCAGGCCTTGGCTCCTTCTCCAAAGAAGCCCAAGCCAGAATGGCAGTAGAAGTATCTCCTGTGACCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS CAA 90 bp | TTTCAGCCATCTTTAAGGCTCAGCTTGCTTCTTGAGAGGCAGGAATaGGGAGCCCGCTGCGAGGACTTCCCTGAGTTCAGACTGCGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: FQPSLRLSLLLERQE*GARCEDFPEFRLRS Trigger: GCTGCGCAGTCTGAACTCAGGGAAGTCCTCGCAGCGGGCTCCCAATTCCTGCCTCTCAAGAAGCAAGCTGAGCCTTAAAGATGGCTGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS GCA 72 bp | AGCAGCATGACTGAATGGGGCATTTTCTGGTCTGCTTaGAGGCCCTTTCTTCGCTGGGATGGTGGATGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SSMTEWGIFWSA*RPFLRWDGGWL Trigger: GAGCCATCCACCATCCCAGCGAAGAAAGGGCCTGCAAGCAGACCAGAAAATGCCCCATTCAGTCATGCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS CAA 90 bp | CTGCTGCAGCACCTCCTAGAATCAGAAAAGGCCTTTCCGAGAATCTaGCTGAACCCTGAGGGTGAGGAGTGTCAGATTTTGCAGCGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LLQHLLESEKAFPRI*LNPEGEECQILQRG Trigger: CCCCCGCTGCAAAATCTGACACTCCTCACCCTCAGGGTTCAGCAAGATTCTCGGAAAGGCCTTTTCTGATTCTAGGAGGTGCTGCAGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000437601.2 ENST00000642107.1 ENST00000662158.1 |
||
| CDS GCA 72 bp | CTCAGTCCAGTAGTGCAGATGTGGAGAGGGCAGCCATaGTCTGGTAGAGTTCCTGAGTGCTTCCTGTTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LSPVVQMWRGQP*SGRVPECFLFW Trigger: CCAAAACAGGAAGCACTCAGGAACTCTACCAGAGCATGGCTGCCCTCTCCACATCTGCACTACTGGACTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS GCA 72 bp | AATCAGGATGCCTCTAACAAGTTCAAGGTGCGGCGCTaGTCTGAGGATGCAAACGGCACTGGAGAGGAGATG | + |
|
Preference number: 6 (lower is better) Translates to: NQDASNKFKVRR*SEDANGTGEEM Trigger: CATCTCCTCTCCAGTGCCGTTTGCATCCTCAGAGCAGCGCCGCACCTTGAACTTGTTAGAGGCATCCTGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641214.1 |
||
| CDS CCA 72 bp | AGTAGCCTCCAAGATGTCCTGAAATGTAGCTTGAGCTaGCTCTGTAGGAGCTGGTGCAGCATGGAGGTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: SSLQDVLKCSLS*LCRSWCSMEVP Trigger: AGGGACCTCCATGCTGCACCAGCTCCTACAGAGCCAGCTCAAGCTACATTTCAGGACATCTTGGAGGCTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS CAA 72 bp | TGCGGTCACAGGAGATACTTCTACTGCCATTCTGGCTaGGGCTTCTTTGGAGAAGGAGCCAAGGCCTGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: CGHRRYFYCHSG*GFFGEGAKACK Trigger: CTTGCAGGCCTTGGCTCCTTCTCCAAAGAAGCCCAAGCCAGAATGGCAGTAGAAGTATCTCCTGTGACCGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS CAA 90 bp | CATTGCCACTCATTAGCTCTATGGTCTTGGCCATGTCAACCTAAGTaGAATGGCGGCCACAGCCCTGTGGCCTTCCAGGATGTCATGAGG | + |
|
Preference number: 6 (lower is better) Translates to: HCHSLALWSWPCQPK*NGGHSPVAFQDVMR Trigger: CCTCATGACATCCTGGAAGGCCACAGGGCTGTGGCCGCCATTCAACTTAGGTTGACATGGCCAAGACCATAGAGCTAATGAGTGGCAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS CAA 90 bp | TGCCTGGCTTGCGGTCACAGGAGATACTTCTACTGCCATTCTGGCTaGGGCTTCTTTGGAGAAGGAGCCAAGGCCTGCAAGGGTTTTAAG | + |
|
Preference number: 6 (lower is better) Translates to: CLACGHRRYFYCHSG*GFFGEGAKACKGFK Trigger: CTTAAAACCCTTGCAGGCCTTGGCTCCTTCTCCAAAGAAGCCCAAGCCAGAATGGCAGTAGAAGTATCTCCTGTGACCGCAAGCCAGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS CCA 72 bp | GTAGAGTTCCTGAGTGCTTCCTGTTTTGGAATGCGGTaGCGTCTGGCCTCCTCACTGTTTGTTCAGCATGCA | + |
|
Preference number: 6 (lower is better) Translates to: VEFLSASCFGMR*RLASSLFVQHA Trigger: TGCATGCTGAACAAACAGTGAGGAGGCCAGACGCCACCGCATTCCAAAACAGGAAGCACTCAGGAACTCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS CCA 72 bp | ATGCACAAAGTCCTTATCTCAGAAGCCACAACTCCCTaGCCAGGATGGGATCCAGGTTCCTGGACTGTCACT | + |
|
Preference number: 6 (lower is better) Translates to: MHKVLISEATTP*PGWDPGSWTVT Trigger: AGTGACAGTCCAGGAACCTGGATCCCATCCTGGCCAGGGAGTTGTGGCTTCTGAGATAAGGACTTTGTGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS CCA 72 bp | AGGACCAGCAGTTTCCAGGAGGCATTCGGAATAGGGTaGGAGGGAAGAGAATCGACCAGACTGCTTATTTGG | + |
|
Preference number: 6 (lower is better) Translates to: RTSSFQEAFGIG*EGRESTRLLIW Trigger: CCAAATAAGCAGTCTGGTCGATTCTCTTCCCTCCCACCCTATTCCGAATGCCTCCTGGAAACTGCTGGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641214.1 |
||
| CDS CAA 72 bp | TCATTAGCTCTATGGTCTTGGCCATGTCAACCTAAGTaGAATGGCGGCCACAGCCCTGTGGCCTTCCAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: SLALWSWPCQPK*NGGHSPVAFQD Trigger: ATCCTGGAAGGCCACAGGGCTGTGGCCGCCATTCAACTTAGGTTGACATGGCCAAGACCATAGAGCTAATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS CAA 90 bp | GAAACCTGCCAACTCTCTGCCTGGAGACTTGCCTTTGATCACGACTaGTCACCTTTCAGGAGATGTTCCACTTTTTCCTGTAGCCTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: ETCQLSAWRLAFDHD*SPFRRCSTFSCSLP Trigger: GGGGAGGCTACAGGAAAAAGTGGAACATCTCCTGAAAGGTGACAAGTCGTGATCAAAGGCAAGTCTCCAGGCAGAGAGTTGGCAGGTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS TCA 72 bp | GGAAACCTGCCAACTCTCTGCCTGGAGACTTGCCTTTaGTCACGACTTGTCACCTTTCAGGAGATGTTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: GNLPTLCLETCL*SRLVTFQEMFH Trigger: GTGGAACATCTCCTGAAAGGTGACAAGTCGTGATCAAAGGCAAGTCTCCAGGCAGAGAGTTGGCAGGTTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000437601.2 ENST00000642107.1 ENST00000662158.1 |
||
| CDS TCA 72 bp | ACATTTTCAGCCATCTTTAAGGCTCAGCTTGCTTCTTaGGAGGCAGGAATTGGGAGCCCGCTGCGAGGACTT | + |
|
Preference number: 6 (lower is better) Translates to: TFSAIFKAQLAS*EAGIGSPLRGL Trigger: AAGTCCTCGCAGCGGGCTCCCAATTCCTGCCTCTCAAGAAGCAAGCTGAGCCTTAAAGATGGCTGAAAATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS GCA 72 bp | AGAGGGCCAGCTGTGGTCCATCTGAAGGTGACAATTTaGCAATTTGTTTTACAGGAAGGCTGCCATGGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: RGPAVVHLKVTI*QFVLQEGCHGP Trigger: AGGCCCATGGCAGCCTTCCTGTAAAACAAATTGGCAAATTGTCACCTTCAGATGGACCACAGCTGGCCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000437601.2 ENST00000641214.1 ENST00000642107.1 ENST00000662158.1 |
||
| CDS GCA 72 bp | ATAGATGTTTGGCACTTCCAACAAGGCCGTGTGTCTTaGCTGGTTCTACGAAGACACTGGGGGAGATGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: IDVWHFQQGRVS*LVLRRHWGRCP Trigger: AGGACATCTCCCCCAGTGTCTTCGTAGAACCAGGCAAGACACACGGCCTTGTTGGAAGTGCCAAACATCTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS CCA 72 bp | CTGTATACCTGGTGGGTCTCAGCAGGAAATCCCTCCTaGAGACTAGGCACTCTTCCCCTTCATCAATTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: LYTWWVSAGNPS*RLGTLPLHQLS Trigger: TGACAATTGATGAAGGGGAAGAGTGCCTAGTCTCCAGGAGGGATTTCCTGCTGAGACCCACCAGGTATACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS CAA 72 bp | CGGAAACCTGCCAACTCTCTGCCTGGAGACTTGCCTTaGATCACGACTTGTCACCTTTCAGGAGATGTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: RKPANSLPGDLP*ITTCHLSGDVP Trigger: TGGAACATCTCCTGAAAGGTGACAAGTCGTGATCAAAGGCAAGTCTCCAGGCAGAGAGTTGGCAGGTTTCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000437601.2 ENST00000642107.1 ENST00000662158.1 |
||
| CDS CAA 72 bp | AATGGGGAAATCGAGGCAATCAGAGACGTACGTGACTaGTTCAACATCTCCAGGCTCCCCATTCATCCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: NGEIEAIRDVRD*FNISRLPIHPA Trigger: CGCTGGATGAATGGGGAGCCTGGAGATGTTGAACAAGTCACGTACGTCTCTGATTGCCTCGATTTCCCCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS CAA 72 bp | GTTTTGGAATGCGGTGGCGTCTGGCCTCCTCACTGTTaGTTCAGCATGCATTACCATGCATTACCATGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: VLECGGVWPPHC*FSMHYHALPWV Trigger: CACCCATGGTAATGCATGGTAATGCATGCTGAACAAACAGTGAGGAGGCCAGACGCCACCGCATTCCAAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS TCA 72 bp | CAGGATTATCACGAACAGGCAGGTGAAAGCACTGGGTaGCATGAGCACAGATTTATGCACCAGGACTCACTC | + |
|
Preference number: 6 (lower is better) Translates to: QDYHEQAGESTG*HEHRFMHQDSL Trigger: GAGTGAGTCCTGGTGCATAAATCTGTGCTCATGTCACCCAGTGCTTTCACCTGCCTGTTCGTGATAATCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS TCA 72 bp | GCCAGAAATAAGGCATGTACGATTCAGTTCTTCCCCTaGGGAGCTGAGAATCCATGTTTCCCTCCACGACCT | + |
|
Preference number: 6 (lower is better) Translates to: ARNKACTIQFFP*GAENPCFPPRP Trigger: AGGTCGTGGAGGGAAACATGGATTCTCAGCTCCTCAGGGGAAGAACTGAATCGTACATGCCTTATTTCTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641214.1 |
||
| CDS GCA 72 bp | ACATACAGAAGGACCAGGAAGCAACCTAAGAATCAGTaGCTGGCTTGCGGTCACAGGAGATACTTCTACTGC | + |
|
Preference number: 6 (lower is better) Translates to: TYRRTRKQPKNQ*LACGHRRYFYC Trigger: GCAGTAGAAGTATCTCCTGTGACCGCAAGCCAGGCACTGATTCTTAGGTTGCTTCCTGGTCCTTCTGTATGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS CCA 72 bp | GTAACCTTTGCTTCGGAAACCTGCCAACTCTCTGCCTaGAGACTTGCCTTTGATCACGACTTGTCACCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: VTFASETCQLSA*RLAFDHDLSPF Trigger: GAAAGGTGACAAGTCGTGATCAAAGGCAAGTCTCCAGGCAGAGAGTTGGCAGGTTTCCGAAGCAAAGGTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000437601.2 ENST00000642107.1 ENST00000662158.1 |
||
| CDS CCA 72 bp | ACAGAAGGACCAGGAAGCAACCTAAGAATCAGTGCCTaGCTTGCGGTCACAGGAGATACTTCTACTGCCATT | + |
|
Preference number: 6 (lower is better) Translates to: TEGPGSNLRISA*LAVTGDTSTAI Trigger: AATGGCAGTAGAAGTATCTCCTGTGACCGCAAGCCAGGCACTGATTCTTAGGTTGCTTCCTGGTCCTTCTGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS CCA 72 bp | TGCAACCTGATGTGCAGGTGTTGCAATAAATGTCTCTaGGGTCACTGCAGACAAGGACCGACTGTATACCTG | + |
|
Preference number: 6 (lower is better) Translates to: CNLMCRCCNKCL*GHCRQGPTVYL Trigger: CAGGTATACAGTCGGTCCTTGTCTGCAGTGACCCCAGAGACATTTATTGCAACACCTGCACATCAGGTTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS CAA 72 bp | AGGGGCTCATCCATTCTGCTGATGAAGAATAGATGTTaGGCACTTCCAACAAGGCCGTGTGTCTTGCCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: RGSSILLMKNRC*ALPTRPCVLPG Trigger: ACCAGGCAAGACACACGGCCTTGTTGGAAGTGCCAAACATCTATTCTTCATCAGCAGAATGGATGAGCCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS CAA 90 bp | CCTTTGCTTCGGAAACCTGCCAACTCTCTGCCTGGAGACTTGCCTTaGATCACGACTTGTCACCTTTCAGGAGATGTTCCACTTTTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PLLRKPANSLPGDLP*ITTCHLSGDVPLFP Trigger: AGGAAAAAGTGGAACATCTCCTGAAAGGTGACAAGTCGTGATCAAAGGCAAGTCTCCAGGCAGAGAGTTGGCAGGTTTCCGAAGCAAAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS CAA 90 bp | ATGCCTTTCAGGGGCTCATCCATTCTGCTGATGAAGAATAGATGTTaGGCACTTCCAACAAGGCCGTGTGTCTTGCCTGGTTCTACGAAG | + |
|
Preference number: 6 (lower is better) Translates to: MPFRGSSILLMKNRC*ALPTRPCVLPGSTK Trigger: CTTCGTAGAACCAGGCAAGACACACGGCCTTGTTGGAAGTGCCAAACATCTATTCTTCATCAGCAGAATGGATGAGCCCCTGAAAGGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS CAA 90 bp | CCTTTGCTTCGGAAACCTGCCAACTCTCTGCCTGGAGACTTGCCTTaGATCACGACTTGTCACCTTTCAGGAGATGTTCCACTTTCTAAG | + |
|
Preference number: 6 (lower is better) Translates to: PLLRKPANSLPGDLP*ITTCHLSGDVPLSK Trigger: CTTAGAAAGTGGAACATCTCCTGAAAGGTGACAAGTCGTGATCAAAGGCAAGTCTCCAGGCAGAGAGTTGGCAGGTTTCCGAAGCAAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000642107.1 ENST00000662158.1 |
||
| CDS TCA 72 bp | ACAGTGAGCAGAATTAAACGCTGCAGGTTTGGGCCATaGCTAAGCAGCATGACTGAATGGGGCATTTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: TVSRIKRCRFGP*LSSMTEWGIFW Trigger: CCAGAAAATGCCCCATTCAGTCATGCTGCTTAGTCATGGCCCAAACCTGCAGCGTTTAATTCTGCTCACTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS TCA 72 bp | CCTGCTCTATTCCATCTTCTCTGCATTATAAGATCCTaGGCTTTAGACCATCCACCCCAGGGTCTGTGCATC | + |
|
Preference number: 6 (lower is better) Translates to: PALFHLLCIIRS*ALDHPPQGLCI Trigger: GATGCACAGACCCTGGGGTGGATGGTCTAAAGCTCAGGATCTTATAATGCAGAGAAGATGGAATAGAGCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS GCA 72 bp | CCTGTAGCTCTCACACTTGACGGTGGAATCATCAAATaGTTTAGCGATGCCATCGGCCAAAATGGGGAAATC | + |
|
Preference number: 6 (lower is better) Translates to: PVALTLDGGIIK*FSDAIGQNGEI Trigger: GATTTCCCCATTTTGGCCGATGGCATCGCTAAAGCATTTGATGATTCCACCGTCAAGTGTGAGAGCTACAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS GCA 72 bp | CGGGCAATAAACATGCATGAAGTGGACACAAATCTCTaGAGCAGAAACCAGCCTGTGACTTTCTTTGGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: RAINMHEVDTNL*SRNQPVTFFGA Trigger: GGCTCCAAAGAAAGTCACAGGCTGGTTTCTGCTGCAGAGATTTGTGTCCACTTCATGCATGTTTATTGCCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS CAA 72 bp | CACCTCCTAGAATCAGAAAAGGCCTTTCCGAGAATCTaGCTGAACCCTGAGGGTGAGGAGTGTCAGATTTTG | + |
|
Preference number: 6 (lower is better) Translates to: HLLESEKAFPRI*LNPEGEECQIL Trigger: CAAAATCTGACACTCCTCACCCTCAGGGTTCAGCAAGATTCTCGGAAAGGCCTTTTCTGATTCTAGGAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000437601.2 ENST00000642107.1 ENST00000662158.1 |
||
| CDS CAA 90 bp | GTGCTTCCTGTTTTGGAATGCGGTGGCGTCTGGCCTCCTCACTGTTaGTTCAGCATGCATTACCATGCATTACCATGGGTGATTAGTAAT | + |
|
Preference number: 6 (lower is better) Translates to: VLPVLECGGVWPPHC*FSMHYHALPWVISN Trigger: ATTACTAATCACCCATGGTAATGCATGGTAATGCATGCTGAACAAACAGTGAGGAGGCCAGACGCCACCGCATTCCAAAACAGGAAGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS CAA 90 bp | AGGATGGGATCCAGGTTCCTGGACTGTCACTTAGCTAATCCACAATaGTCCAGAAGTAGCCTCCAAGATGTCCTGAAATGTAGCTTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: RMGSRFLDCHLANPQ*SRSSLQDVLKCSLS Trigger: GCTCAAGCTACATTTCAGGACATCTTGGAGGCTACTTCTGGACAATTGTGGATTAGCTAAGTGACAGTCCAGGAACCTGGATCCCATCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS GCA 72 bp | TTATTGGTTCCTTCCTCCAGACAGGGGCCTGGTTCCTaGTCTATTCCATCTTCTCTGCATTATAAGATCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LLVPSSRQGPGS*SIPSSLHYKIL Trigger: CAGGATCTTATAATGCAGAGAAGATGGAATAGAGCAGGAACCAGGCCCCTGTCTGGAGGAAGGAACCAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS CAA 90 bp | ATTCGGAATAGGGTGGGAGGGAAGAGAATCGACCAGACTGCTTATTaGGCTCTCACTGATTCTGTCCGCATTTTAGTTAAAGCTGCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: IRNRVGGKRIDQTAY*ALTDSVRILVKAAQ Trigger: TTGAGCAGCTTTAACTAAAATGCGGACAGAATCAGTGAGAGCCAAATAAGCAGTCTGGTCGATTCTCTTCCCTCCCACCCTATTCCGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641214.1 |
||
| CDS CAA 72 bp | TCCAGGTTCCTGGACTGTCACTTAGCTAATCCACAATaGTCCAGAAGTAGCCTCCAAGATGTCCTGAAATGT | + |
|
Preference number: 6 (lower is better) Translates to: SRFLDCHLANPQ*SRSSLQDVLKC Trigger: ACATTTCAGGACATCTTGGAGGCTACTTCTGGACAATTGTGGATTAGCTAAGTGACAGTCCAGGAACCTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS CAA 72 bp | AGGGTGGGAGGGAAGAGAATCGACCAGACTGCTTATTaGGCTCTCACTGATTCTGTCCGCATTTTAGTTAAA | + |
|
Preference number: 6 (lower is better) Translates to: RVGGKRIDQTAY*ALTDSVRILVK Trigger: TTTAACTAAAATGCGGACAGAATCAGTGAGAGCCAAATAAGCAGTCTGGTCGATTCTCTTCCCTCCCACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641214.1 |
||
| CDS CAA 90 bp | GCAGGAAATCCCTCCTGGAGACTAGGCACTCTTCCCCTTCATCAATaGTCATATTTACAAATCAGAATGATTCCAGAGTGTCAAGACCTG | + |
|
Preference number: 6 (lower is better) Translates to: AGNPSWRLGTLPLHQ*SYLQIRMIPECQDL Trigger: CAGGTCTTGACACTCTGGAATCATTCTGATTTGTAAATATGACAATTGATGAAGGGGAAGAGTGCCTAGTCTCCAGGAGGGATTTCCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS TCA 72 bp | TTCCCCTTCATCAATTGTCATATTTACAAATCAGAATaGTTCCAGAGTGTCAAGACCTGCTGTCTCCATCTC | + |
|
Preference number: 6 (lower is better) Translates to: FPFINCHIYKSE*FQSVKTCCLHL Trigger: GAGATGGAGACAGCAGGTCTTGACACTCTGGAATCATTCTGATTTGTAAATATGACAATTGATGAAGGGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||
| CDS TCA 72 bp | AAGGAGATGGAGATAATATGCATGTTTGCCTTCTTCTaGTTATGTACAGTGTCATTTCGCCAAAAATCTACA | + |
|
Preference number: 6 (lower is better) Translates to: KEMEIICMFAFF*LCTVSFRQKST Trigger: TGTAGATTTTTGGCGAAATGACACTGTACATAATCAGAAGAAGGCAAACATGCATATTATCTCCATCTCCTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000437601.2 |
||