Pregenerated sensors for LINC01128 (Homo sapiens)
Ensembl gene IDs: ENSG00000228794Ensembl transcript IDs: ENST00000415295.1, ENST00000441765.6, ENST00000445118.7, ENST00000659124.1, ENST00000660797.1, ENST00000666741.1, ENST00000667414.1, ENST00000668541.1, ENST00000669922.1, ENST00000670780.1, ENST00000670824.1
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCATGGCTTAAACAACAGACATTTCTCTCTCACAACCCTGGAGGCTaGAAGTCCCAGATCAAGGTGTGGGCAGGGCTGGTTCCTCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: AWLKQQTFLSHNPGG*KSQIKVWAGLVPPE Trigger: CTCAGGAGGAACCAGCCCTGCCCACACCTTGATCTGGGACTTCCAGCCTCCAGGGTTGTGAGAGAGAAATGTCTGTTGTTTAAGCCATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000669922.1 ENST00000670780.1 |
||
| CDS GCA 90 bp | CCACAGGGTTTGGAATCAGATCTGTGTGAATTTGAGTCCCGGTTCTaGCGCTTAACAAGGAGTCACACAATCACTTACCCACACCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PQGLESDLCEFESRF*RLTRSHTITYPHLS Trigger: GCTCAGGTGTGGGTAAGTGATTGTGTGACTCCTTGTTAAGCGGCAGAACCGGGACTCAAATTCACACAGATCTGATTCCAAACCCTGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667414.1 |
||
| CDS CCA 90 bp | TACAAATCTAGTCCCATCAGGGGTAAGGACTTCAACATAAGAATTTaGGCAGGAGAAAATTCAACCCATAACAGATCCATACCGAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: YKSSPIRGKDFNIRI*AGENSTHNRSIPRC Trigger: ACATCTCGGTATGGATCTGTTATGGGTTGAATTTTCTCCTGCCCAAATTCTTATGTTGAAGTCCTTACCCCTGATGGGACTAGATTTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000669922.1 ENST00000670780.1 |
||
| CDS TCA 90 bp | TGCCCTGTGCTTCTAAGACATTATTTTTCAATACTCATGGCAAACTaGTGTTGTAGATATTCATGCCTCCTTTACAGAGTAGAAAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: CPVLLRHYFSILMAN*CCRYSCLLYRVENR Trigger: TCTGTTTTCTACTCTGTAAAGGAGGCATGAATATCTACAACATCAGTTTGCCATGAGTATTGAAAAATAATGTCTTAGAAGCACAGGGCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000415295.1 ENST00000441765.6 ENST00000660797.1 ENST00000668541.1 ENST00000669922.1 ENST00000670780.1 ENST00000670824.1 |
||
| CDS CCA 72 bp | AAACAACAGACATTTCTCTCTCACAACCCTGGAGGCTaGAAGTCCCAGATCAAGGTGTGGGCAGGGCTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: KQQTFLSHNPGG*KSQIKVWAGLV Trigger: AACCAGCCCTGCCCACACCTTGATCTGGGACTTCCAGCCTCCAGGGTTGTGAGAGAGAAATGTCTGTTGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000669922.1 ENST00000670780.1 |
||
| CDS CAA 72 bp | TTCTATTCTGGCTCACGCAGTGGATGGAAGATGGCATaGAAGGAGCTCTTAAGTCCTCTCCAAGCCTCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: FYSGSRSGWKMA*KELLSPLQASL Trigger: CAGCGAGGCTTGGAGAGGACTTAAGAGCTCCTTCAATGCCATCTTCCATCCACTGCGTGAGCCAGAATAGAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000445118.7 ENST00000659124.1 ENST00000666741.1 ENST00000670780.1 |
||
| CDS CAA 90 bp | CCTGTTCATCCTTCCCCACACCACCAGGCCTTATCTTTCACTGTGTaGGTAATTCTGCTTTTTCCAGGATGTCCTGTAGTTGGAAGCACA | + |
|
Preference number: 6 (lower is better) Translates to: PVHPSPHHQALSFTV*VILLFPGCPVVGST Trigger: TGTGCTTCCAACTACAGGACATCCTGGAAAAAGCAGAATTACCAACACAGTGAAAGATAAGGCCTGGTGGTGTGGGGAAGGATGAACAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000669922.1 |
||
| CDS CAA 90 bp | CAGAGGGCTTATTGTCTAATAACACTATGCTTAGGGCCACAGGGTTaGGAATCAGATCTGTGTGAATTTGAGTCCCGGTTCTGCCGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: QRAYCLITLCLGPQG*ESDLCEFESRFCRL Trigger: TAAGCGGCAGAACCGGGACTCAAATTCACACAGATCTGATTCCAAACCCTGTGGCCCTAAGCATAGTGTTATTAGACAATAAGCCCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667414.1 |
||
| CDS GCA 72 bp | CAGATACACCCGTACATCAACATGCATCAAAGCACATaGATACACAGAGACATGCGCAATGTGCACAGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: QIHPYINMHQST*IHRDMRNVHRY Trigger: GTACCTGTGCACATTGCGCATGTCTCTGTGTATGCATGTGCTTTGATGCATGTTGATGTACGGGTGTATCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445118.7 |
||
| CDS TCA 72 bp | CTGCCTGGACACACCACAGTTTATCCATTCATCTACTaGAGGACATCTTGGTTGATTCTGAGTTTGGGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: LPGHTTVYPFIY*RTSWLILSLGD Trigger: ATCACCCAAACTCAGAATCAACCAAGATGTCCTTCAGTAGATGAATGGATAAACTGTGGTGTGTCCAGGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669922.1 |
||
| CDS GCA 72 bp | AACATAAACCCACATATACACACTTGCACACACTGTTaGACACAGTACACAGACACACATGCATGTGAACAC | + |
|
Preference number: 6 (lower is better) Translates to: NINPHIHTCTHC*TQYTDTHACEH Trigger: GTGTTCACATGCATGTGTGTCTGTGTACTGTGTGCAACAGTGTGTGCAAGTGTGTATATGTGGGTTTATGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445118.7 |
||
| CDS CAA 72 bp | TATTGTCTAATAACACTATGCTTAGGGCCACAGGGTTaGGAATCAGATCTGTGTGAATTTGAGTCCCGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: YCLITLCLGPQG*ESDLCEFESRF Trigger: GAACCGGGACTCAAATTCACACAGATCTGATTCCAAACCCTGTGGCCCTAAGCATAGTGTTATTAGACAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667414.1 |
||