Pregenerated sensors for LINC01127 (Homo sapiens)
Ensembl gene IDs: ENSG00000281162Ensembl transcript IDs: ENST00000625702.1, ENST00000627215.1, ENST00000627273.1, ENST00000627337.1, ENST00000628502.2
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AGCTTGGCTGGTGGGGTCCAGGTTCCCCGGCCTCCTGTTGGGCTGTaGCCACTGTCTTCCCAGATGGATCACCGAGCGCCTAAGTGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SLAGGVQVPRPPVGL*PLSSQMDHRAPKWN Trigger: GTTCCACTTAGGCGCTCGGTGATCCATCTGGGAAGACAGTGGCCACAGCCCAACAGGAGGCCGGGGAACCTGGACCCCACCAGCCAAGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS GCA 90 bp | AATAAGCGGCATGACCCAAGGCCTCTCAACTGCCCAAGCAGACCCTaGCTTCTGGAATTGCTCCCAGCCGGGTGGCGAAGAGTGGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: NKRHDPRPLNCPSRP*LLELLPAGWRRVVW Trigger: CCACACCACTCTTCGCCACCCGGCTGGGAGCAATTCCAGAAGGCAGGGTCTGCTTGGGCAGTTGAGAGGCCTTGGGTCATGCCGCTTATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS CCA 90 bp | AGGTTCCCCGGCCTCCTGTTGGGCTGTGGCCACTGTCTTCCCAGATaGATCACCGAGCGCCTAAGTGGAACTTCAGCTTTATCCAAACTC | + |
|
Preference number: 5 (lower is better) Translates to: RFPGLLLGCGHCLPR*ITERLSGTSALSKL Trigger: GAGTTTGGATAAAGCTGAAGTTCCACTTAGGCGCTCGGTGATCCATCTGGGAAGACAGTGGCCACAGCCCAACAGGAGGCCGGGGAACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS GCA 90 bp | GTGCTGCTCGCCAGGGTGGAGGGCTGTACCACCCACGTTCTCCATTaGTATGTCTTTGGCTCCTGCAGAGAGAAAAAGCAAGTAAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: VLLARVEGCTTHVLH*YVFGSCREKKQVSE Trigger: CTCACTTACTTGCTTTTTCTCTCTGCAGGAGCCAAAGACATAGCAATGGAGAACGTGGGTGGTACAGCCCTCCACCCTGGCGAGCAGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS CCA 90 bp | TGTGGCCAGAAGTGTGACAAGCGCTACTCAGATGGTTCTCAACTCTaGCTGTACGAGAGGATAACCCCAGGAAGCCTGCATCCCACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CGQKCDKRYSDGSQL*LYERITPGSLHPTF Trigger: GAAGGTGGGATGCAGGCTTCCTGGGGTTATCCTCTCGTACAGCCAGAGTTGAGAACCATCTGAGTAGCGCTTGTCACACTTCTGGCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000625702.1 ENST00000627215.1 ENST00000628502.2 |
||
| CDS TCA 90 bp | AGGCTACTGGATCAGAGGCTAGAGATGGGACCCAGCAACCTGCAGTaGACAAGTCCCTCAGACGATTCTGATGTGGCCAGAAGTGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: RLLDQRLEMGPSNLQ*TSPSDDSDVARSVT Trigger: TGTCACACTTCTGGCCACATCAGAATCGTCTGAGGGACTTGTTCACTGCAGGTTGCTGGGTCCCATCTCTAGCCTCTGATCCAGTAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000625702.1 ENST00000627215.1 ENST00000628502.2 |
||
| CDS GCA 90 bp | CAGGCCAGTCAGTACTTTTTAAGCTCCTACGTGATTCTAATGTGCTaGTCGCCAGGGTGGAGGGCTGTACCACCCACGTTCTCCATTGCT | + |
|
Preference number: 5 (lower is better) Translates to: QASQYFLSSYVILMC*SPGWRAVPPTFSIA Trigger: AGCAATGGAGAACGTGGGTGGTACAGCCCTCCACCCTGGCGAGCAGCACATTAGAATCACGTAGGAGCTTAAAAAGTACTGACTGGCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000625702.1 ENST00000627215.1 ENST00000627273.1 ENST00000628502.2 |
||
| CDS GCA 90 bp | GACCAGGCCAGTCAGTACTTTTTAAGCTCCTACGTGATTCTAATGTaGTGCTCGCCAGGGTGGAGGGCTGTACCACCCACGTTCTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: DQASQYFLSSYVILM*CSPGWRAVPPTFSI Trigger: AATGGAGAACGTGGGTGGTACAGCCCTCCACCCTGGCGAGCAGCACATTAGAATCACGTAGGAGCTTAAAAAGTACTGACTGGCCTGGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000625702.1 ENST00000627215.1 ENST00000627273.1 ENST00000628502.2 |
||
| CDS TCA 90 bp | GATGGGACCCAGCAACCTGCAGTGAACAAGTCCCTCAGACGATTCTaGTGTGGCCAGAAGTGTGACAAGCGCTACTCAGATGGTTCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: DGTQQPAVNKSLRRF*CGQKCDKRYSDGSQ Trigger: TTGAGAACCATCTGAGTAGCGCTTGTCACACTTCTGGCCACATCAGAATCGTCTGAGGGACTTGTTCACTGCAGGTTGCTGGGTCCCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000625702.1 ENST00000627215.1 ENST00000628502.2 |
||
| CDS CCA 90 bp | GGGCTGTGGCCACTGTCTTCCCAGATGGATCACCGAGCGCCTAAGTaGAACTTCAGCTTTATCCAAACTCCTCCTGCTGATGGTTTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: GLWPLSSQMDHRAPK*NFSFIQTPPADGFN Trigger: ATTGAAACCATCAGCAGGAGGAGTTTGGATAAAGCTGAAGTTCCACTTAGGCGCTCGGTGATCCATCTGGGAAGACAGTGGCCACAGCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS TCA 90 bp | TGCAGTGAACAAGTCCCTCAGACGATTCTGATGTGGCCAGAAGTGTaGCAAGCGCTACTCAGATGGTTCTCAACTCTGGCTGTACGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: CSEQVPQTILMWPEV*QALLRWFSTLAVRE Trigger: CTCTCGTACAGCCAGAGTTGAGAACCATCTGAGTAGCGCTTGTCACACTTCTGGCCACATCAGAATCGTCTGAGGGACTTGTTCACTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000625702.1 ENST00000627215.1 ENST00000628502.2 |
||
| CDS TCA 90 bp | CCTCTGTGTCCTGTCACGGGCTGGCATGCCAGCTTTCATCAGAAATaGCATTCTGTGTGGTCACTGCATCATCCCACTTTATCCAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: PLCPVTGWHASFHQK*HSVWSLHHPTLSST Trigger: AGTGCTGGATAAAGTGGGATGATGCAGTGACCACACAGAATGTCATTTCTGATGAAAGCTGGCATGCCAGCCCGTGACAGGACACAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS GCA 90 bp | TCTCAGGTCCAGGAGCCTCTGGTGTCCGCTTCTATGCTTTTAGTTTaGCATTTGGGTGGTCCAATTGCCTTCACACCGAAAAAGACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SQVQEPLVSASMLLV*HLGGPIAFTPKKTR Trigger: CCTGGTCTTTTTCGGTGTGAAGGCAATTGGACCACCCAAATGGCAAACTAAAAGCATAGAAGCGGACACCAGAGGCTCCTGGACCTGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000627273.1 |
||
| CDS CCA 90 bp | GGAGCCTCTGGTGTCCGCTTCTATGCTTTTAGTTTGCCATTTGGGTaGTCCAATTGCCTTCACACCGAAAAAGACCAGGCCAGTCAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: GASGVRFYAFSLPFG*SNCLHTEKDQASQY Trigger: GTACTGACTGGCCTGGTCTTTTTCGGTGTGAAGGCAATTGGACCACCCAAATGGCAAACTAAAAGCATAGAAGCGGACACCAGAGGCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000627273.1 |
||
| CDS GCA 90 bp | TCTCAGGTCCAGGAGCCTCTGGTGTCCGCTTCTATGCTTTTAGTTTaGCATTTGGGTGGTCCAATTGCCTGTCAAGTAGAATCCCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SQVQEPLVSASMLLV*HLGGPIACQVESLV Trigger: CACAAGGGATTCTACTTGACAGGCAATTGGACCACCCAAATGGCAAACTAAAAGCATAGAAGCGGACACCAGAGGCTCCTGGACCTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS CCA 90 bp | ATACATTCCATGCTCATTCAAGCCTATCTGCTTCTCAAAGATTTCTaGAGGCCGGAAGTCGAGATCAGGTGCCAGCATGGGGTTCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: IHSMLIQAYLLLKDF*RPEVEIRCQHGVLV Trigger: CACCAGAACCCCATGCTGGCACCTGATCTCGACTTCCGGCCTCCAGAAATCTTTGAGAAGCAGATAGGCTTGAATGAGCATGGAATGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000625702.1 ENST00000627337.1 |
||
| CDS CCA 90 bp | TACTTTTTAAGCTCCTACGTGATTCTAATGTGCTGCTCGCCAGGGTaGAGGGCTGTACCACCCACGTTCTCCATTGCTATGTCTTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: YFLSSYVILMCCSPG*RAVPPTFSIAMSLA Trigger: AGCCAAAGACATAGCAATGGAGAACGTGGGTGGTACAGCCCTCCACCCTGGCGAGCAGCACATTAGAATCACGTAGGAGCTTAAAAAGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000625702.1 ENST00000627215.1 ENST00000627273.1 ENST00000628502.2 |
||
| CDS CCA 90 bp | GGAGCCTCTGGTGTCCGCTTCTATGCTTTTAGTTTGCCATTTGGGTaGTCCAATTGCCTGTCAAGTAGAATCCCTTGTGAAGCATTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GASGVRFYAFSLPFG*SNCLSSRIPCEAFQ Trigger: CTGGAATGCTTCACAAGGGATTCTACTTGACAGGCAATTGGACCACCCAAATGGCAAACTAAAAGCATAGAAGCGGACACCAGAGGCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS GCA 90 bp | GGTGTCCGCTTCTATGCTTTTAGTTTGCCATTTGGGTGGTCCAATTaGCTGTCAAGTAGAATCCCTTGTGAAGCATTCCAGTCTCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GVRFYAFSLPFGWSN*LSSRIPCEAFQSPL Trigger: CAAAGGAGACTGGAATGCTTCACAAGGGATTCTACTTGACAGGCAATTGGACCACCCAAATGGCAAACTAAAAGCATAGAAGCGGACACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS GCA 90 bp | CAGTTACACACCAACGCGTATTTACAGAGAGACTTTAAATGGATCTaGAGGGAACACCGTTTCAATCCCCACCCAGCTCAGAACCAACAA | + |
|
Preference number: 5 (lower is better) Translates to: QLHTNAYLQRDFKWI*REHRFNPHPAQNQQ Trigger: TTGTTGGTTCTGAGCTGGGTGGGGATTGAAACGGTGTTCCCTGCAGATCCATTTAAAGTCTCTCTGTAAATACGCGTTGGTGTGTAACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS GCA 90 bp | GTAGTGATGGTGCTTGAATTGGCCTGCAGGGTCCAAGGTACCCATTaGCTTCTCAGTGTGTATTGTGTTACAGAAAATAACAGGCTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: VVMVLELACRVQGTH*LLSVYCVTENNRLA Trigger: TGCAAGCCTGTTATTTTCTGTAACACAATACACACTGAGAAGGCAATGGGTACCTTGGACCCTGCAGGCCAATTCAAGCACCATCACTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS CCA 90 bp | AAGGAACAGTTACACACCAACGCGTATTTACAGAGAGACTTTAAATaGATCTGCAGGGAACACCGTTTCAATCCCCACCCAGCTCAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: KEQLHTNAYLQRDFK*ICREHRFNPHPAQN Trigger: GTTCTGAGCTGGGTGGGGATTGAAACGGTGTTCCCTGCAGATCCATTTAAAGTCTCTCTGTAAATACGCGTTGGTGTGTAACTGTTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS CCA 90 bp | CACAAGGTAGAGCCATTCCAATGTCATTTCTTGCTGGATTCAATCTaGGCAATTGGCATTATCTGTTGTCACTCATTCTGCAGCATCGCC | + |
|
Preference number: 5 (lower is better) Translates to: HKVEPFQCHFLLDSI*AIGIICCHSFCSIA Trigger: GGCGATGCTGCAGAATGAGTGACAACAGATAATGCCAATTGCCCAGATTGAATCCAGCAAGAAATGACATTGGAATGGCTCTACCTTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000627215.1 ENST00000627337.1 |
||
| CDS TCA 90 bp | TTGGCTCTTGTTTTAGGCGTCTCTATTCAGAACACTCTGTTAGCCTaGATCCATTTCCAGAATGCACTTGACAGACTTCCAGCTGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LALVLGVSIQNTLLA*IHFQNALDRLPAAF Trigger: AAAAGCAGCTGGAAGTCTGTCAAGTGCATTCTGGAAATGGATTCAGGCTAACAGAGTGTTCTGAATAGAGACGCCTAAAACAAGAGCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000625702.1 |
||
| CDS TCA 90 bp | CCATTGCTATGTCTTTGGCTCCTGCAGAGAGAAAAAGCAAGTAAGTaGGAACCTTTCAAGGTGGACTCACAGAGGACAGTTAATAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: PLLCLWLLQREKASK*EPFKVDSQRTVNKD Trigger: GTCTTTATTAACTGTCCTCTGTGAGTCCACCTTGAAAGGTTCTCACTTACTTGCTTTTTCTCTCTGCAGGAGCCAAAGACATAGCAATGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS TCA 90 bp | TACTTACTTGTTTTAGGCGTCTCTATTCAGAACACTCTGTTAGCCTaGATCCATTTCCAGAATGCACTTGACAGACTTCCAGCTGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: YLLVLGVSIQNTLLA*IHFQNALDRLPAAF Trigger: AAAAGCAGCTGGAAGTCTGTCAAGTGCATTCTGGAAATGGATTCAGGCTAACAGAGTGTTCTGAATAGAGACGCCTAAAACAAGTAAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000627215.1 ENST00000627337.1 |
||
| CDS CAA 90 bp | GGGCCTCCCCGGATGGCGGCATTCCTAGCCCTGGGCCCCCATCTCTaGAGACCACATCTGGTCACTTCCAGGGCCACATCTCAGGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GPPRMAAFLALGPHL*RPHLVTSRATSQVQ Trigger: CTGGACCTGAGATGTGGCCCTGGAAGTGACCAGATGTGGTCTCAAGAGATGGGGGCCCAGGGCTAGGAATGCCGCCATCCGGGGAGGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000627215.1 ENST00000627273.1 ENST00000628502.2 |
||
| CDS GCA 72 bp | CATGACCCAAGGCCTCTCAACTGCCCAAGCAGACCCTaGCTTCTGGAATTGCTCCCAGCCGGGTGGCGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: HDPRPLNCPSRP*LLELLPAGWRR Trigger: TCTTCGCCACCCGGCTGGGAGCAATTCCAGAAGGCAGGGTCTGCTTGGGCAGTTGAGAGGCCTTGGGTCATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS CAA 72 bp | CGGATGGCGGCATTCCTAGCCCTGGGCCCCCATCTCTaGAGACCACATCTGGTCACTTCCAGGGCCACATCT | + |
|
Preference number: 6 (lower is better) Translates to: RMAAFLALGPHL*RPHLVTSRATS Trigger: AGATGTGGCCCTGGAAGTGACCAGATGTGGTCTCAAGAGATGGGGGCCCAGGGCTAGGAATGCCGCCATCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000627215.1 ENST00000627273.1 ENST00000628502.2 |
||
| CDS CAA 90 bp | CAGGGCAGGCAATCAGGGCAGGCTTTGGCAGCGGGGATGATGGCCTaGGCTGAAGTCAACCATGAAGGGGAATCCACGCTCCTCTGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: QGRQSGQALAAGMMA*AEVNHEGESTLLCV Trigger: GACACAGAGGAGCGTGGATTCCCCTTCATGGTTGACTTCAGCCAAGGCCATCATCCCCGCTGCCAAAGCCTGCCCTGATTGCCTGCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS CCA 72 bp | GCCGAAGAAATTGCATTTGCCAACCGCCCTAGGCCATaGAGGCACACTGCTACAGCCAGCCTTGGTCCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: AEEIAFANRPRP*RHTATASLGPQ Trigger: CTGGGGACCAAGGCTGGCTGTAGCAGTGTGCCTCCATGGCCTAGGGCGGTTGGCAAATGCAATTTCTTCGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS TCA 72 bp | AGGGCAGGCAATCAGGGCAGGCTTTGGCAGCGGGGATaGTGGCCTTGGCTGAAGTCAACCATGAAGGGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: RAGNQGRLWQRG*WPWLKSTMKGN Trigger: ATTCCCCTTCATGGTTGACTTCAGCCAAGGCCATCATCCCCGCTGCCAAAGCCTGCCCTGATTGCCTGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS CCA 72 bp | GGCCTCCTGTTGGGCTGTGGCCACTGTCTTCCCAGATaGATCACCGAGCGCCTAAGTGGAACTTCAGCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: GLLLGCGHCLPR*ITERLSGTSAL Trigger: TAAAGCTGAAGTTCCACTTAGGCGCTCGGTGATCCATCTGGGAAGACAGTGGCCACAGCCCAACAGGAGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS CAA 90 bp | CACTGCATCATCCCACTTTATCCAGCACTGCCGAAGAAATTGCATTaGCCAACCGCCCTAGGCCATGGAGGCACACTGCTACAGCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: HCIIPLYPALPKKLH*PTALGHGGTLLQPA Trigger: GGCTGGCTGTAGCAGTGTGCCTCCATGGCCTAGGGCGGTTGGCAAATGCAATTTCTTCGGCAGTGCTGGATAAAGTGGGATGATGCAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS CCA 72 bp | AGCTCCTACGTGATTCTAATGTGCTGCTCGCCAGGGTaGAGGGCTGTACCACCCACGTTCTCCATTGCTATG | + |
|
Preference number: 6 (lower is better) Translates to: SSYVILMCCSPG*RAVPPTFSIAM Trigger: CATAGCAATGGAGAACGTGGGTGGTACAGCCCTCCACCCTGGCGAGCAGCACATTAGAATCACGTAGGAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000625702.1 ENST00000627215.1 ENST00000627273.1 ENST00000628502.2 |
||
| CDS TCA 72 bp | GATCAGAGGCTAGAGATGGGACCCAGCAACCTGCAGTaGACAAGTCCCTCAGACGATTCTGATGTGGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: DQRLEMGPSNLQ*TSPSDDSDVAR Trigger: TCTGGCCACATCAGAATCGTCTGAGGGACTTGTTCACTGCAGGTTGCTGGGTCCCATCTCTAGCCTCTGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000625702.1 ENST00000627215.1 ENST00000628502.2 |
||
| CDS GCA 72 bp | GCCAGGGTGGAGGGCTGTACCACCCACGTTCTCCATTaGTATGTCTTTGGCTCCTGCAGAGAGAAAAAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: ARVEGCTTHVLH*YVFGSCREKKQ Trigger: TTGCTTTTTCTCTCTGCAGGAGCCAAAGACATAGCAATGGAGAACGTGGGTGGTACAGCCCTCCACCCTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS CAA 90 bp | TGTGGTCACTGCATCATCCCACTTTATCCAGCACTGCCGAAGAAATaGCATTTGCCAACCGCCCTAGGCCATGGAGGCACACTGCTACAG | + |
|
Preference number: 6 (lower is better) Translates to: CGHCIIPLYPALPKK*HLPTALGHGGTLLQ Trigger: CTGTAGCAGTGTGCCTCCATGGCCTAGGGCGGTTGGCAAATGCAATTTCTTCGGCAGTGCTGGATAAAGTGGGATGATGCAGTGACCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS CAA 90 bp | GCTAGCCAGGCTGTCAGGCACGCAAACTCCATGCAGGACCTGACTTaGATTTGTCATCTTCAAAACACTTCTCTCCCCCAGGGCAGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: ASQAVRHANSMQDLT*ICHLQNTSLPQGRQ Trigger: TTGCCTGCCCTGGGGGAGAGAAGTGTTTTGAAGATGACAAATCAAAGTCAGGTCCTGCATGGAGTTTGCGTGCCTGACAGCCTGGCTAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS GCA 72 bp | GCCAGGGTGGAGGGCTGTACCACCCACGTTCTCCATTaGTATGTCTTTGGCTCTTGTTTTAGGCGTCTCTAT | + |
|
Preference number: 6 (lower is better) Translates to: ARVEGCTTHVLH*YVFGSCFRRLY Trigger: ATAGAGACGCCTAAAACAAGAGCCAAAGACATAGCAATGGAGAACGTGGGTGGTACAGCCCTCCACCCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000625702.1 ENST00000627273.1 ENST00000628502.2 |
||
| CDS GCA 72 bp | AGTCAGTACTTTTTAAGCTCCTACGTGATTCTAATGTaGTGCTCGCCAGGGTGGAGGGCTGTACCACCCACG | + |
|
Preference number: 6 (lower is better) Translates to: SQYFLSSYVILM*CSPGWRAVPPT Trigger: CGTGGGTGGTACAGCCCTCCACCCTGGCGAGCAGCACATTAGAATCACGTAGGAGCTTAAAAAGTACTGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000625702.1 ENST00000627215.1 ENST00000627273.1 ENST00000628502.2 |
||
| CDS GCA 72 bp | AATCCACGCTCCTCTGTGTCCTGTCACGGGCTGGCATaGCAGCTTTCATCAGAAATGACATTCTGTGTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: NPRSSVSCHGLA*QLSSEMTFCVV Trigger: GACCACACAGAATGTCATTTCTGATGAAAGCTGGCATGCCAGCCCGTGACAGGACACAGAGGAGCGTGGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS CAA 72 bp | ATCCCACTTTATCCAGCACTGCCGAAGAAATTGCATTaGCCAACCGCCCTAGGCCATGGAGGCACACTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: IPLYPALPKKLH*PTALGHGGTLL Trigger: TAGCAGTGTGCCTCCATGGCCTAGGGCGGTTGGCAAATGCAATTTCTTCGGCAGTGCTGGATAAAGTGGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS CAA 72 bp | TGCATCATCCCACTTTATCCAGCACTGCCGAAGAAATaGCATTTGCCAACCGCCCTAGGCCATGGAGGCACA | + |
|
Preference number: 6 (lower is better) Translates to: CIIPLYPALPKK*HLPTALGHGGT Trigger: TGTGCCTCCATGGCCTAGGGCGGTTGGCAAATGCAATTTCTTCGGCAGTGCTGGATAAAGTGGGATGATGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS CAA 72 bp | CCAGGAGCCTCTGGTGTCCGCTTCTATGCTTTTAGTTaGCCATTTGGGTGGTCCAATTGCCTGATCGAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: PGASGVRFYAFS*PFGWSNCLIEL Trigger: GAGCTCGATCAGGCAATTGGACCACCCAAATGGCAAACTAAAAGCATAGAAGCGGACACCAGAGGCTCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628502.2 |
||
| CDS CAA 90 bp | GTCCAGGAGCCTCTGGTGTCCGCTTCTATGCTTTTAGTTTGCCATTaGGGTGGTCCAATTGCCTTCACACCGAAAAAGACCAGGCCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: VQEPLVSASMLLVCH*GGPIAFTPKKTRPV Trigger: GACTGGCCTGGTCTTTTTCGGTGTGAAGGCAATTGGACCACCCAAATGGCAAACTAAAAGCATAGAAGCGGACACCAGAGGCTCCTGGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000627273.1 |
||
| CDS CAA 90 bp | ATCTCAGGTCCAGGAGCCTCTGGTGTCCGCTTCTATGCTTTTAGTTaGCCATTTGGGTGGTCCAATTGCCTGATCGAGCTCCAACGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: ISGPGASGVRFYAFS*PFGWSNCLIELQRQ Trigger: CTGACGTTGGAGCTCGATCAGGCAATTGGACCACCCAAATGGCAAACTAAAAGCATAGAAGCGGACACCAGAGGCTCCTGGACCTGAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628502.2 |
||
| CDS TCA 72 bp | CAAGTCCCTCAGACGATTCTGATGTGGCCAGAAGTGTaGCAAGCGCTACTCAGATGGTTCTCAACTCTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: QVPQTILMWPEV*QALLRWFSTLA Trigger: AGCCAGAGTTGAGAACCATCTGAGTAGCGCTTGTCACACTTCTGGCCACATCAGAATCGTCTGAGGGACTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000625702.1 ENST00000627215.1 ENST00000628502.2 |
||
| CDS TCA 72 bp | CAGCAACCTGCAGTGAACAAGTCCCTCAGACGATTCTaGTGTGGCCAGAAGTGTGACAAGCGCTACTCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: QQPAVNKSLRRF*CGQKCDKRYSD Trigger: ATCTGAGTAGCGCTTGTCACACTTCTGGCCACATCAGAATCGTCTGAGGGACTTGTTCACTGCAGGTTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000625702.1 ENST00000627215.1 ENST00000628502.2 |
||
| CDS CCA 72 bp | ATGCTCATTCAAGCCTATCTGCTTCTCAAAGATTTCTaGAGGCCGGAAGTCGAGATCAGGTGCCAGCATGGG | + |
|
Preference number: 6 (lower is better) Translates to: MLIQAYLLLKDF*RPEVEIRCQHG Trigger: CCCATGCTGGCACCTGATCTCGACTTCCGGCCTCCAGAAATCTTTGAGAAGCAGATAGGCTTGAATGAGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000625702.1 ENST00000627337.1 |
||
| CDS CCA 72 bp | AAGTGTGACAAGCGCTACTCAGATGGTTCTCAACTCTaGCTGTACGAGAGGATAACCCCAGGAAGCCTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: KCDKRYSDGSQL*LYERITPGSLH Trigger: ATGCAGGCTTCCTGGGGTTATCCTCTCGTACAGCCAGAGTTGAGAACCATCTGAGTAGCGCTTGTCACACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000625702.1 ENST00000627215.1 ENST00000628502.2 |
||
| CDS CCA 72 bp | CCACTGTCTTCCCAGATGGATCACCGAGCGCCTAAGTaGAACTTCAGCTTTATCCAAACTCCTCCTGCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: PLSSQMDHRAPK*NFSFIQTPPAD Trigger: ATCAGCAGGAGGAGTTTGGATAAAGCTGAAGTTCCACTTAGGCGCTCGGTGATCCATCTGGGAAGACAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS CAA 72 bp | CCAGGAGCCTCTGGTGTCCGCTTCTATGCTTTTAGTTaGCCATTTGGGTGGTCCAATTGCCTTCACACCGAA | + |
|
Preference number: 6 (lower is better) Translates to: PGASGVRFYAFS*PFGWSNCLHTE Trigger: TTCGGTGTGAAGGCAATTGGACCACCCAAATGGCAAACTAAAAGCATAGAAGCGGACACCAGAGGCTCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627273.1 |
||
| CDS CAA 90 bp | ATCTCAGGTCCAGGAGCCTCTGGTGTCCGCTTCTATGCTTTTAGTTaGCCATTTGGGTGGTCCAATTGCCTTCACACCGAAAAAGACCAG | + |
|
Preference number: 6 (lower is better) Translates to: ISGPGASGVRFYAFS*PFGWSNCLHTEKDQ Trigger: CTGGTCTTTTTCGGTGTGAAGGCAATTGGACCACCCAAATGGCAAACTAAAAGCATAGAAGCGGACACCAGAGGCTCCTGGACCTGAGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000627273.1 |
||
| CDS TCA 72 bp | CCTGTCACGGGCTGGCATGCCAGCTTTCATCAGAAATaGCATTCTGTGTGGTCACTGCATCATCCCACTTTA | + |
|
Preference number: 6 (lower is better) Translates to: PVTGWHASFHQK*HSVWSLHHPTL Trigger: TAAAGTGGGATGATGCAGTGACCACACAGAATGTCATTTCTGATGAAAGCTGGCATGCCAGCCCGTGACAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS GCA 72 bp | CAGGAGCCTCTGGTGTCCGCTTCTATGCTTTTAGTTTaGCATTTGGGTGGTCCAATTGCCTTCACACCGAAA | + |
|
Preference number: 6 (lower is better) Translates to: QEPLVSASMLLV*HLGGPIAFTPK Trigger: TTTCGGTGTGAAGGCAATTGGACCACCCAAATGGCAAACTAAAAGCATAGAAGCGGACACCAGAGGCTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627273.1 |
||
| CDS CCA 72 bp | GGTGTCCGCTTCTATGCTTTTAGTTTGCCATTTGGGTaGTCCAATTGCCTTCACACCGAAAAAGACCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GVRFYAFSLPFG*SNCLHTEKDQA Trigger: GGCCTGGTCTTTTTCGGTGTGAAGGCAATTGGACCACCCAAATGGCAAACTAAAAGCATAGAAGCGGACACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000627273.1 |
||
| CDS CAA 72 bp | CCAGGAGCCTCTGGTGTCCGCTTCTATGCTTTTAGTTaGCCATTTGGGTGGTCCAATTGCCTGTCAAGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: PGASGVRFYAFS*PFGWSNCLSSR Trigger: TCTACTTGACAGGCAATTGGACCACCCAAATGGCAAACTAAAAGCATAGAAGCGGACACCAGAGGCTCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS CAA 90 bp | GTCCAGGAGCCTCTGGTGTCCGCTTCTATGCTTTTAGTTTGCCATTaGGGTGGTCCAATTGCCTGTCAAGTAGAATCCCTTGTGAAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: VQEPLVSASMLLVCH*GGPIACQVESLVKH Trigger: ATGCTTCACAAGGGATTCTACTTGACAGGCAATTGGACCACCCAAATGGCAAACTAAAAGCATAGAAGCGGACACCAGAGGCTCCTGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS CAA 90 bp | ATCTCAGGTCCAGGAGCCTCTGGTGTCCGCTTCTATGCTTTTAGTTaGCCATTTGGGTGGTCCAATTGCCTGTCAAGTAGAATCCCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: ISGPGASGVRFYAFS*PFGWSNCLSSRIPC Trigger: ACAAGGGATTCTACTTGACAGGCAATTGGACCACCCAAATGGCAAACTAAAAGCATAGAAGCGGACACCAGAGGCTCCTGGACCTGAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS CAA 90 bp | GCAGTCTTTTACTTTGTGTATTCTGGTGCTTTGATATTTGCTGCCTaGCTGATCCTAGAAGGACAGCCACACCCAGGCCTAGCCCATTCC | + |
|
Preference number: 6 (lower is better) Translates to: AVFYFVYSGALIFAA*LILEGQPHPGLAHS Trigger: GGAATGGGCTAGGCCTGGGTGTGGCTGTCCTTCTAGGATCAGCAAGGCAGCAAATATCAAAGCACCAGAATACACAAAGTAAAAGACTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS TCA 72 bp | TTGCTAGGCTCAGTTGACATCTATGCCCCACACTTCTaGAAAGTAGTGATGGTGCTTGAATTGGCCTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LLGSVDIYAPHF*KVVMVLELACR Trigger: CCTGCAGGCCAATTCAAGCACCATCACTACTTTTCAGAAGTGTGGGGCATAGATGTCAACTGAGCCTAGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS GCA 72 bp | CAGGAGCCTCTGGTGTCCGCTTCTATGCTTTTAGTTTaGCATTTGGGTGGTCCAATTGCCTGTCAAGTAGAA | + |
|
Preference number: 6 (lower is better) Translates to: QEPLVSASMLLV*HLGGPIACQVE Trigger: TTCTACTTGACAGGCAATTGGACCACCCAAATGGCAAACTAAAAGCATAGAAGCGGACACCAGAGGCTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS GCA 72 bp | ACCAACGCGTATTTACAGAGAGACTTTAAATGGATCTaGAGGGAACACCGTTTCAATCCCCACCCAGCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: TNAYLQRDFKWI*REHRFNPHPAQ Trigger: CTGAGCTGGGTGGGGATTGAAACGGTGTTCCCTGCAGATCCATTTAAAGTCTCTCTGTAAATACGCGTTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS CAA 72 bp | CCTCTGGTGTCCGCTTCTATGCTTTTAGTTTGCCATTaGGGTGGTCCAATTGCCTTCACACCGAAAAAGACC | + |
|
Preference number: 6 (lower is better) Translates to: PLVSASMLLVCH*GGPIAFTPKKT Trigger: GGTCTTTTTCGGTGTGAAGGCAATTGGACCACCCAAATGGCAAACTAAAAGCATAGAAGCGGACACCAGAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000627273.1 |
||
| CDS TCA 72 bp | GGAATTTGGTCCCAGAAGGAGATAAGTTGGCCTCTGTaGGGACCTACACATCTAAGGTGTAAACTCAAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: GIWSQKEISWPL*GPTHLRCKLKC Trigger: GCACTTGAGTTTACACCTTAGATGTGTAGGTCCTCACAGAGGCCAACTTATCTCCTTCTGGGACCAAATTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000627215.1 ENST00000627273.1 |
||
| CDS CAA 72 bp | CCTCTGGTGTCCGCTTCTATGCTTTTAGTTTGCCATTaGGGTGGTCCAATTGCCTGTCAAGTAGAATCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: PLVSASMLLVCH*GGPIACQVESL Trigger: AAGGGATTCTACTTGACAGGCAATTGGACCACCCAAATGGCAAACTAAAAGCATAGAAGCGGACACCAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS CAA 90 bp | CTGGACAGTTCCCTCCACAAGGTAGAGCCATTCCAATGTCATTTCTaGCTGGATTCAATCTGGGCAATTGGCATTATCTGTTGTCACTCA | + |
|
Preference number: 6 (lower is better) Translates to: LDSSLHKVEPFQCHF*LDSIWAIGIICCHS Trigger: TGAGTGACAACAGATAATGCCAATTGCCCAGATTGAATCCAGCAAGAAATGACATTGGAATGGCTCTACCTTGTGGAGGGAACTGTCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000627215.1 ENST00000627337.1 |
||
| CDS CAA 90 bp | TGTATGACAGTCTTTTCAATGGCAGGCACCCCTGACCTGCTAGTCTaGCCACACCTAAATCATAATGATACCTGTGTTACAGTCACCCTT | + |
|
Preference number: 6 (lower is better) Translates to: CMTVFSMAGTPDLLV*PHLNHNDTCVTVTL Trigger: AAGGGTGACTGTAACACAGGTATCATTATGATTTAGGTGTGGCAAGACTAGCAGGTCAGGGGTGCCTGCCATTGAAAAGACTGTCATACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS GCA 72 bp | TTCTATGCTTTTAGTTTGCCATTTGGGTGGTCCAATTaGCTTCACACCGAAAAAGACCAGGCCAGTCAGTAC | + |
|
Preference number: 6 (lower is better) Translates to: FYAFSLPFGWSN*LHTEKDQASQY Trigger: GTACTGACTGGCCTGGTCTTTTTCGGTGTGAAGGCAATTGGACCACCCAAATGGCAAACTAAAAGCATAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000627273.1 |
||
| CDS CCA 72 bp | GGTGTCCGCTTCTATGCTTTTAGTTTGCCATTTGGGTaGTCCAATTGCCTGTCAAGTAGAATCCCTTGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: GVRFYAFSLPFG*SNCLSSRIPCE Trigger: TTCACAAGGGATTCTACTTGACAGGCAATTGGACCACCCAAATGGCAAACTAAAAGCATAGAAGCGGACACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS CCA 72 bp | TTACACACCAACGCGTATTTACAGAGAGACTTTAAATaGATCTGCAGGGAACACCGTTTCAATCCCCACCCA | + |
|
Preference number: 6 (lower is better) Translates to: LHTNAYLQRDFK*ICREHRFNPHP Trigger: TGGGTGGGGATTGAAACGGTGTTCCCTGCAGATCCATTTAAAGTCTCTCTGTAAATACGCGTTGGTGTGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS CAA 72 bp | GTCTTTTCAATGGCAGGCACCCCTGACCTGCTAGTCTaGCCACACCTAAATCATAATGATACCTGTGTTACA | + |
|
Preference number: 6 (lower is better) Translates to: VFSMAGTPDLLV*PHLNHNDTCVT Trigger: TGTAACACAGGTATCATTATGATTTAGGTGTGGCAAGACTAGCAGGTCAGGGGTGCCTGCCATTGAAAAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS GCA 72 bp | AGTCTTTTACTTTGTGTATTCTGGTGCTTTGATATTTaGTGCCTTGCTGATCCTAGAAGGACAGCCACACCC | + |
|
Preference number: 6 (lower is better) Translates to: SLLLCVFWCFDI*CLADPRRTATP Trigger: GGGTGTGGCTGTCCTTCTAGGATCAGCAAGGCAGCAAATATCAAAGCACCAGAATACACAAAGTAAAAGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS CAA 90 bp | CTACCCTGTATTAATGCAGTCTTTTACTTTGTGTATTCTGGTGCTTaGATATTTGCTGCCTTGCTGATCCTAGAAGGACAGCCACACCCA | + |
|
Preference number: 6 (lower is better) Translates to: LPCINAVFYFVYSGA*IFAALLILEGQPHP Trigger: TGGGTGTGGCTGTCCTTCTAGGATCAGCAAGGCAGCAAATATCAAAGCACCAGAATACACAAAGTAAAAGACTGCATTAATACAGGGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS TCA 72 bp | GTTTTAGGCGTCTCTATTCAGAACACTCTGTTAGCCTaGATCCATTTCCAGAATGCACTTGACAGACTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: VLGVSIQNTLLA*IHFQNALDRLP Trigger: TGGAAGTCTGTCAAGTGCATTCTGGAAATGGATTCAGGCTAACAGAGTGTTCTGAATAGAGACGCCTAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000625702.1 ENST00000627215.1 ENST00000627337.1 |
||
| CDS TCA 72 bp | TCTCTTGGTAACATAGGACATCTTGCTAGGCTCAGTTaGCATCTATGCCCCACACTTCTGAAAAGTAGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: SLGNIGHLARLS*HLCPTLLKSSD Trigger: ATCACTACTTTTCAGAAGTGTGGGGCATAGATGTCAACTGAGCCTAGCAAGATGTCCTATGTTACCAAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS GCA 72 bp | TTCTATGCTTTTAGTTTGCCATTTGGGTGGTCCAATTaGCTGTCAAGTAGAATCCCTTGTGAAGCATTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: FYAFSLPFGWSN*LSSRIPCEAFQ Trigger: CTGGAATGCTTCACAAGGGATTCTACTTGACAGGCAATTGGACCACCCAAATGGCAAACTAAAAGCATAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS CCA 72 bp | GAGCCATTCCAATGTCATTTCTTGCTGGATTCAATCTaGGCAATTGGCATTATCTGTTGTCACTCATTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: EPFQCHFLLDSI*AIGIICCHSFC Trigger: GCAGAATGAGTGACAACAGATAATGCCAATTGCCCAGATTGAATCCAGCAAGAAATGACATTGGAATGGCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000627215.1 ENST00000627337.1 |
||
| CDS CCA 72 bp | AGAGAGAAAAAGCAAGTAAGTGAGAACCTTTCAAGGTaGACTCACAGAGGACAGTTAATAAAGACAGGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: REKKQVSENLSR*THRGQLIKTGV Trigger: CACCCCTGTCTTTATTAACTGTCCTCTGTGAGTCCACCTTGAAAGGTTCTCACTTACTTGCTTTTTCTCTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS GCA 72 bp | TTAAATAGATACATTCCATGCTCATTCAAGCCTATCTaGTTCTCAAAGATTTCTGGAGGCCGGAAGTCGAGA | + |
|
Preference number: 6 (lower is better) Translates to: LNRYIPCSFKPI*FSKISGGRKSR Trigger: TCTCGACTTCCGGCCTCCAGAAATCTTTGAGAAGCAGATAGGCTTGAATGAGCATGGAATGTATCTATTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000625702.1 ENST00000627337.1 |
||
| CDS GCA 72 bp | TTATTCATTCATTTTGGTAATATGCTTTCAAGCACCTaGTCCAAGCCCAGCATTGTTCTAGGCTCTAAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: LFIHFGNMLSST*SKPSIVLGSKD Trigger: ATCCTTAGAGCCTAGAACAATGCTGGGCTTGGAGCAGGTGCTTGAAAGCATATTACCAAAATGAATGAATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS CAA 90 bp | CAGCATCTTCGCCTATTCTTTCATTCATTCATTTATTCATTCATTTaGGTAATATGCTTTCAAGCACCTGCTCCAAGCCCAGCATTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: QHLRLFFHSFIYSFI*VICFQAPAPSPALF Trigger: GAACAATGCTGGGCTTGGAGCAGGTGCTTGAAAGCATATTACCAAAATGAATGAATAAATGAATGAATGAAAGAATAGGCGAAGATGCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS TCA 72 bp | CACTCTGTTAGCCTGAATCCATTTCCAGAATGCACTTaGCAGACTTCCAGCTGCTTTTTAAATAGATACATT | + |
|
Preference number: 6 (lower is better) Translates to: HSVSLNPFPECT*QTSSCFLNRYI Trigger: AATGTATCTATTTAAAAAGCAGCTGGAAGTCTGTCAAGTGCATTCTGGAAATGGATTCAGGCTAACAGAGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000625702.1 ENST00000627215.1 ENST00000627337.1 |
||
| CDS CAA 72 bp | ATTAATGCAGTCTTTTACTTTGTGTATTCTGGTGCTTaGATATTTGCTGCCTTGCTGATCCTAGAAGGACAG | + |
|
Preference number: 6 (lower is better) Translates to: INAVFYFVYSGA*IFAALLILEGQ Trigger: CTGTCCTTCTAGGATCAGCAAGGCAGCAAATATCAAAGCACCAGAATACACAAAGTAAAAGACTGCATTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||
| CDS CAA 72 bp | CGCCTATTCTTTCATTCATTCATTTATTCATTCATTTaGGTAATATGCTTTCAAGCACCTGCTCCAAGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: RLFFHSFIYSFI*VICFQAPAPSP Trigger: TGGGCTTGGAGCAGGTGCTTGAAAGCATATTACCAAAATGAATGAATAAATGAATGAATGAAAGAATAGGCG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627215.1 |
||