Pregenerated sensors for LINC01124 (Homo sapiens)
Ensembl gene IDs: ENSG00000222033Ensembl transcript IDs: ENST00000409786.1
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGCCGGCGGCCTGGAGAGTGGAGACTGTGTCCGACGGGAGGTGGGTaGGGGAGAGGAGTAGGCCGAGCTCCGGCGGCCACTCCGCAGTGC | + |
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Preference number: 5 (lower is better) Translates to: GRRPGEWRLCPTGGG*GRGVGRAPAATPQC Trigger: GCACTGCGGAGTGGCCGCCGGAGCTCGGCCTACTCCTCTCCCCCACCCACCTCCCGTCGGACACAGTCTCCACTCTCCAGGCCGCCGGCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS CCA 90 bp | CCACGGCCGGCGGCCTGGAGAGTGGAGACTGTGTCCGACGGGAGGTaGGTGGGGGAGAGGAGTAGGCCGAGCTCCGGCGGCCACTCCGCA | + |
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Preference number: 5 (lower is better) Translates to: PRPAAWRVETVSDGR*VGERSRPSSGGHSA Trigger: TGCGGAGTGGCCGCCGGAGCTCGGCCTACTCCTCTCCCCCACCCACCTCCCGTCGGACACAGTCTCCACTCTCCAGGCCGCCGGCCGTGG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS GCA 90 bp | GACGCTGCATCGGGAGATAGGTCACCCCGTCCGTCCCGGTCGCAGTaGGGTTCCCGTGAGGAAGACGGGCAGAGAGGCCGGGCGCGAACT | + |
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Preference number: 5 (lower is better) Translates to: DAASGDRSPRPSRSQ*GSREEDGQRGRART Trigger: AGTTCGCGCCCGGCCTCTCTGCCCGTCTTCCTCACGGGAACCGCACTGCGACCGGGACGGACGGGGTGACCTATCTCCCGATGCAGCGTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS CCA 90 bp | CCAGTAGCTCCTGGTCTGCCAGGCTTGCGAGAGGGCGCGCTGGCTTaGCGGGGCTCCGGGCGAGAAATCACCAGCAGCGCTGGGGCTTTC | + |
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Preference number: 5 (lower is better) Translates to: PVAPGLPGLREGALA*RGSGREITSSAGAF Trigger: GAAAGCCCCAGCGCTGCTGGTGATTTCTCGCCCGGAGCCCCGCCAAGCCAGCGCGCCCTCTCGCAAGCCTGGCAGACCAGGAGCTACTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS TCA 90 bp | GGTGGGCATGACGGGTCGCCTTGGGTGTCCTGCCGAGCTCAGCTTTaGGGGTATGCGCGGCGCGGGTGTTTTTCCCAGGTCCACTCTGCA | + |
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Preference number: 5 (lower is better) Translates to: GGHDGSPWVSCRAQL*GYARRGCFSQVHSA Trigger: TGCAGAGTGGACCTGGGAAAAACACCCGCGCCGCGCATACCCTCAAAGCTGAGCTCGGCAGGACACCCAAGGCGACCCGTCATGCCCACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS CCA 90 bp | AGGGTGCAAGCATGTGCAGGCGCGAGTGTGTGCCAAGGGGCTCCCTaGCCTCCGACTTGCATCCAGGGAAGAGCTCCCTCGAGTCTCACG | + |
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Preference number: 5 (lower is better) Translates to: RVQACAGASVCQGAP*PPTCIQGRAPSSLT Trigger: CGTGAGACTCGAGGGAGCTCTTCCCTGGATGCAAGTCGGAGGCCAGGGAGCCCCTTGGCACACACTCGCGCCTGCACATGCTTGCACCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS TCA 90 bp | GGGCGTGGGAGAAGGTGGGCCCGGAGGCATCGCATCCCCGACCCCTaGTGGAAGTGCGGAGGGCATCCTTATACAGTCCAGATTCCGAGT | + |
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Preference number: 5 (lower is better) Translates to: GRGRRWARRHRIPDP*WKCGGHPYTVQIPS Trigger: ACTCGGAATCTGGACTGTATAAGGATGCCCTCCGCACTTCCATCAGGGGTCGGGGATGCGATGCCTCCGGGCCCACCTTCTCCCACGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS GCA 90 bp | TGTGCAGGCGCGAGTGTGTGCCAAGGGGCTCCCTGGCCTCCGACTTaGATCCAGGGAAGAGCTCCCTCGAGTCTCACGCTTCTCCAAGAC | + |
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Preference number: 5 (lower is better) Translates to: CAGASVCQGAPWPPT*IQGRAPSSLTLLQD Trigger: GTCTTGGAGAAGCGTGAGACTCGAGGGAGCTCTTCCCTGGATGCAAGTCGGAGGCCAGGGAGCCCCTTGGCACACACTCGCGCCTGCACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS GCA 90 bp | AACCAGATCGCTTCGAGGGTGCAAGCATGTGCAGGCGCGAGTGTGTaGCAAGGGGCTCCCTGGCCTCCGACTTGCATCCAGGGAAGAGCT | + |
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Preference number: 5 (lower is better) Translates to: NQIASRVQACAGASV*QGAPWPPTCIQGRA Trigger: AGCTCTTCCCTGGATGCAAGTCGGAGGCCAGGGAGCCCCTTGGCACACACTCGCGCCTGCACATGCTTGCACCCTCGAAGCGATCTGGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS GCA 90 bp | GAAACCAGCGCTAAGGAACCAGATCGCTTCGAGGGTGCAAGCATGTaGAGGCGCGAGTGTGTGCCAAGGGGCTCCCTGGCCTCCGACTTG | + |
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Preference number: 5 (lower is better) Translates to: ETSAKEPDRFEGASM*RRECVPRGSLASDL Trigger: CAAGTCGGAGGCCAGGGAGCCCCTTGGCACACACTCGCGCCTGCACATGCTTGCACCCTCGAAGCGATCTGGTTCCTTAGCGCTGGTTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS TCA 90 bp | TGCGAGGGACCCATTGTATTTGGGTCGCAAGCAGCCCACCCGTCTTaGGTACGATATTCTCATTCCGCAGGCGCGCCCTGGGCGTGGGAG | + |
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Preference number: 5 (lower is better) Translates to: CEGPIVFGSQAAHPS*VRYSHSAGAPWAWE Trigger: CTCCCACGCCCAGGGCGCGCCTGCGGAATGAGAATATCGTACTCAAGACGGGTGGGCTGCTTGCGACCCAAATACAATGGGTCCCTCGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS TCA 90 bp | GGGCCTGGGAGGACCGGAATCTGGACGGGTTTTCACAAACGGAGATaGGGCCGAGAGCAGCCAACTGCGACCACTCAAGAGAGGGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: GPGRTGIWTGFHKRR*GREQPTATTQERAF Trigger: GAAGGCCCTCTCTTGAGTGGTCGCAGTTGGCTGCTCTCGGCCTCATCTCCGTTTGTGAAAACCCGTCCAGATTCCGGTCCTCCCAGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS GCA 90 bp | CTGGACGGGTTTTCACAAACGGAGATGAGGCCGAGAGCAGCCAACTaGGACCACTCAAGAGAGGGCCTTCTGTACGCTCAGCACCGTCCT | + |
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Preference number: 5 (lower is better) Translates to: LDGFSQTEMRPRAAN*DHSREGLLYAQHRP Trigger: AGGACGGTGCTGAGCGTACAGAAGGCCCTCTCTTGAGTGGTCGCAGTTGGCTGCTCTCGGCCTCATCTCCGTTTGTGAAAACCCGTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS CCA 90 bp | GAAGGGGGCGTGCGAGTGCAGGATGTGCGAGGGACCCATTGTATTTaGGTCGCAAGCAGCCCACCCGTCTTGAGTACGATATTCTCATTC | + |
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Preference number: 5 (lower is better) Translates to: EGGVRVQDVRGTHCI*VASSPPVLSTIFSF Trigger: GAATGAGAATATCGTACTCAAGACGGGTGGGCTGCTTGCGACCCAAATACAATGGGTCCCTCGCACATCCTGCACTCGCACGCCCCCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS GCA 90 bp | AGATTCAATAAAAAGGGCTGCCTTCCATCCTGCTTAGCCCGGCCCTaGCCGCCTCCCTGGGAAAGGGGACTTCGAAGATCTCAAAGAAGC | + |
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Preference number: 5 (lower is better) Translates to: RFNKKGCLPSCLARP*PPPWERGLRRSQRS Trigger: GCTTCTTTGAGATCTTCGAAGTCCCCTTTCCCAGGGAGGCGGGCAGGGCCGGGCTAAGCAGGATGGAAGGCAGCCCTTTTTATTGAATCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS CCA 90 bp | AAACAGCTATTCAGCAAAGCCTCTCTCCAAACTTCAGCTGGGGCCTaGGAGGACCGGAATCTGGACGGGTTTTCACAAACGGAGATGAGG | + |
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Preference number: 5 (lower is better) Translates to: KQLFSKASLQTSAGA*EDRNLDGFSQTEMR Trigger: CCTCATCTCCGTTTGTGAAAACCCGTCCAGATTCCGGTCCTCCCAGGCCCCAGCTGAAGTTTGGAGAGAGGCTTTGCTGAATAGCTGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS TCA 90 bp | AAGTCTGTACTGACTTTTCTCCCGCCTTCGGGATCCTCTCTCGTATaGTTTGTGGTTTGTGGGACCACAACAACCAGGCTTCCTCGACCG | + |
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Preference number: 5 (lower is better) Translates to: KSVLTFLPPSGSSLV*FVVCGTTTTRLPRP Trigger: CGGTCGAGGAAGCCTGGTTGTTGTGGTCCCACAAACCACAAATCATACGAGAGAGGATCCCGAAGGCGGGAGAAAAGTCAGTACAGACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS CCA 72 bp | GCGGCCTGGAGAGTGGAGACTGTGTCCGACGGGAGGTaGGTGGGGGAGAGGAGTAGGCCGAGCTCCGGCGGC | + |
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Preference number: 6 (lower is better) Translates to: AAWRVETVSDGR*VGERSRPSSGG Trigger: GCCGCCGGAGCTCGGCCTACTCCTCTCCCCCACCCACCTCCCGTCGGACACAGTCTCCACTCTCCAGGCCGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS CCA 72 bp | CCTGGTCTGCCAGGCTTGCGAGAGGGCGCGCTGGCTTaGCGGGGCTCCGGGCGAGAAATCACCAGCAGCGCT | + |
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Preference number: 6 (lower is better) Translates to: PGLPGLREGALA*RGSGREITSSA Trigger: AGCGCTGCTGGTGATTTCTCGCCCGGAGCCCCGCCAAGCCAGCGCGCCCTCTCGCAAGCCTGGCAGACCAGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS GCA 72 bp | TCGGGAGATAGGTCACCCCGTCCGTCCCGGTCGCAGTaGGGTTCCCGTGAGGAAGACGGGCAGAGAGGCCGG | + |
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Preference number: 6 (lower is better) Translates to: SGDRSPRPSRSQ*GSREEDGQRGR Trigger: CCGGCCTCTCTGCCCGTCTTCCTCACGGGAACCGCACTGCGACCGGGACGGACGGGGTGACCTATCTCCCGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS CAA 90 bp | TCCAGTAGCTCCTGGTCTGCCAGGCTTGCGAGAGGGCGCGCTGGCTaGGCGGGGCTCCGGGCGAGAAATCACCAGCAGCGCTGGGGCTTT | + |
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Preference number: 6 (lower is better) Translates to: SSSSWSARLARGRAG*AGLRARNHQQRWGF Trigger: AAAGCCCCAGCGCTGCTGGTGATTTCTCGCCCGGAGCCCCGCCAAGCCAGCGCGCCCTCTCGCAAGCCTGGCAGACCAGGAGCTACTGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS TCA 72 bp | GGCGGGACAGCACAGCTTCTTCCCCTCGGGTGGGCATaGCGGGTCGCCTTGGGTGTCCTGCCGAGCTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: GGTAQLLPLGWA*RVALGVLPSSA Trigger: AGCTGAGCTCGGCAGGACACCCAAGGCGACCCGTCATGCCCACCCGAGGGGAAGAAGCTGTGCTGTCCCGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS CCA 72 bp | GTACGATATTCTCATTCCGCAGGCGCGCCCTGGGCGTaGGAGAAGGTGGGCCCGGAGGCATCGCATCCCCGA | + |
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Preference number: 6 (lower is better) Translates to: VRYSHSAGAPWA*EKVGPEASHPR Trigger: TCGGGGATGCGATGCCTCCGGGCCCACCTTCTCCCACGCCCAGGGCGCGCCTGCGGAATGAGAATATCGTAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS CCA 72 bp | GCATGTGCAGGCGCGAGTGTGTGCCAAGGGGCTCCCTaGCCTCCGACTTGCATCCAGGGAAGAGCTCCCTCG | + |
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Preference number: 6 (lower is better) Translates to: ACAGASVCQGAP*PPTCIQGRAPS Trigger: CGAGGGAGCTCTTCCCTGGATGCAAGTCGGAGGCCAGGGAGCCCCTTGGCACACACTCGCGCCTGCACATGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS TCA 72 bp | GACGGGTCGCCTTGGGTGTCCTGCCGAGCTCAGCTTTaGGGGTATGCGCGGCGCGGGTGTTTTTCCCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: DGSPWVSCRAQL*GYARRGCFSQV Trigger: GACCTGGGAAAAACACCCGCGCCGCGCATACCCTCAAAGCTGAGCTCGGCAGGACACCCAAGGCGACCCGTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS GCA 72 bp | GCTTCGAGGGTGCAAGCATGTGCAGGCGCGAGTGTGTaGCAAGGGGCTCCCTGGCCTCCGACTTGCATCCAG | + |
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Preference number: 6 (lower is better) Translates to: ASRVQACAGASV*QGAPWPPTCIQ Trigger: CTGGATGCAAGTCGGAGGCCAGGGAGCCCCTTGGCACACACTCGCGCCTGCACATGCTTGCACCCTCGAAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS GCA 72 bp | GCCTTGGGTGTCCTGCCGAGCTCAGCTTTGAGGGTATaGGCGGCGCGGGTGTTTTTCCCAGGTCCACTCTGC | + |
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Preference number: 6 (lower is better) Translates to: ALGVLPSSALRV*AARVFFPGPLC Trigger: GCAGAGTGGACCTGGGAAAAACACCCGCGCCGCGCATACCCTCAAAGCTGAGCTCGGCAGGACACCCAAGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS GCA 72 bp | GCTAAGGAACCAGATCGCTTCGAGGGTGCAAGCATGTaGAGGCGCGAGTGTGTGCCAAGGGGCTCCCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: AKEPDRFEGASM*RRECVPRGSLA Trigger: GGCCAGGGAGCCCCTTGGCACACACTCGCGCCTGCACATGCTTGCACCCTCGAAGCGATCTGGTTCCTTAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS CAA 90 bp | ATGTGCAGGCGCGAGTGTGTGCCAAGGGGCTCCCTGGCCTCCGACTaGCATCCAGGGAAGAGCTCCCTCGAGTCTCACGCTTCTCCAAGA | + |
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Preference number: 6 (lower is better) Translates to: MCRRECVPRGSLASD*HPGKSSLESHASPR Trigger: TCTTGGAGAAGCGTGAGACTCGAGGGAGCTCTTCCCTGGATGCAAGTCGGAGGCCAGGGAGCCCCTTGGCACACACTCGCGCCTGCACAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS TCA 72 bp | AGAAGGTGGGCCCGGAGGCATCGCATCCCCGACCCCTaGTGGAAGTGCGGAGGGCATCCTTATACAGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: RRWARRHRIPDP*WKCGGHPYTVQ Trigger: CTGGACTGTATAAGGATGCCCTCCGCACTTCCATCAGGGGTCGGGGATGCGATGCCTCCGGGCCCACCTTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS CAA 72 bp | AGGGGGCGTGCGAGTGCAGGATGTGCGAGGGACCCATaGTATTTGGGTCGCAAGCAGCCCACCCGTCTTGAG | + |
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Preference number: 6 (lower is better) Translates to: RGRASAGCARDP*YLGRKQPTRLE Trigger: CTCAAGACGGGTGGGCTGCTTGCGACCCAAATACAATGGGTCCCTCGCACATCCTGCACTCGCACGCCCCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS CAA 90 bp | GTGCGAGGGACCCATTGTATTTGGGTCGCAAGCAGCCCACCCGTCTaGAGTACGATATTCTCATTCCGCAGGCGCGCCCTGGGCGTGGGA | + |
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Preference number: 6 (lower is better) Translates to: VRGTHCIWVASSPPV*STIFSFRRRALGVG Trigger: TCCCACGCCCAGGGCGCGCCTGCGGAATGAGAATATCGTACTCAAGACGGGTGGGCTGCTTGCGACCCAAATACAATGGGTCCCTCGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS CAA 90 bp | AGAGCAGCCGACCTCATCTTCAGAAGCCAGATCGGGTCGGCCAAGTaGTGTGGTCGCCGCTCGCGTTTTAGAGGGGACAACTCGTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: RAADLIFRSQIGSAK*CGRRSRFRGDNSLG Trigger: CCCCAACGAGTTGTCCCCTCTAAAACGCGAGCGGCGACCACACAACTTGGCCGACCCGATCTGGCTTCTGAAGATGAGGTCGGCTGCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS TCA 72 bp | CCCATTGTATTTGGGTCGCAAGCAGCCCACCCGTCTTaGGTACGATATTCTCATTCCGCAGGCGCGCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: PIVFGSQAAHPS*VRYSHSAGAPW Trigger: CCAGGGCGCGCCTGCGGAATGAGAATATCGTACTCAAGACGGGTGGGCTGCTTGCGACCCAAATACAATGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS CAA 72 bp | CCCGCCTTCGGGATCCTCTCTCGTATGATTTGTGGTTaGTGGGACCACAACAACCAGGCTTCCTCGACCGCG | + |
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Preference number: 6 (lower is better) Translates to: PAFGILSRMICG*WDHNNQASSTA Trigger: CGCGGTCGAGGAAGCCTGGTTGTTGTGGTCCCACAAACCACAAATCATACGAGAGAGGATCCCGAAGGCGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS CAA 72 bp | CGTGCGAGTGCAGGATGTGCGAGGGACCCATTGTATTaGGGTCGCAAGCAGCCCACCCGTCTTGAGTACGAT | + |
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Preference number: 6 (lower is better) Translates to: RASAGCARDPLY*GRKQPTRLEYD Trigger: ATCGTACTCAAGACGGGTGGGCTGCTTGCGACCCAAATACAATGGGTCCCTCGCACATCCTGCACTCGCACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS CAA 72 bp | GACCTCATCTTCAGAAGCCAGATCGGGTCGGCCAAGTaGTGTGGTCGCCGCTCGCGTTTTAGAGGGGACAAC | + |
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Preference number: 6 (lower is better) Translates to: DLIFRSQIGSAK*CGRRSRFRGDN Trigger: GTTGTCCCCTCTAAAACGCGAGCGGCGACCACACAACTTGGCCGACCCGATCTGGCTTCTGAAGATGAGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS TCA 72 bp | AGGACCGGAATCTGGACGGGTTTTCACAAACGGAGATaGGGCCGAGAGCAGCCAACTGCGACCACTCAAGAG | + |
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Preference number: 6 (lower is better) Translates to: RTGIWTGFHKRR*GREQPTATTQE Trigger: CTCTTGAGTGGTCGCAGTTGGCTGCTCTCGGCCTCATCTCCGTTTGTGAAAACCCGTCCAGATTCCGGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS CCA 72 bp | GCCTTCGGGATCCTCTCTCGTATGATTTGTGGTTTGTaGGACCACAACAACCAGGCTTCCTCGACCGCGCCT | + |
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Preference number: 6 (lower is better) Translates to: AFGILSRMICGL*DHNNQASSTAP Trigger: AGGCGCGGTCGAGGAAGCCTGGTTGTTGTGGTCCCACAAACCACAAATCATACGAGAGAGGATCCCGAAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS CCA 72 bp | GTGCGAGTGCAGGATGTGCGAGGGACCCATTGTATTTaGGTCGCAAGCAGCCCACCCGTCTTGAGTACGATA | + |
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Preference number: 6 (lower is better) Translates to: VRVQDVRGTHCI*VASSPPVLSTI Trigger: TATCGTACTCAAGACGGGTGGGCTGCTTGCGACCCAAATACAATGGGTCCCTCGCACATCCTGCACTCGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS CAA 72 bp | ACCCATTGTATTTGGGTCGCAAGCAGCCCACCCGTCTaGAGTACGATATTCTCATTCCGCAGGCGCGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: THCIWVASSPPV*STIFSFRRRAL Trigger: CAGGGCGCGCCTGCGGAATGAGAATATCGTACTCAAGACGGGTGGGCTGCTTGCGACCCAAATACAATGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS CAA 90 bp | AGAAGGGGGCGTGCGAGTGCAGGATGTGCGAGGGACCCATTGTATTaGGGTCGCAAGCAGCCCACCCGTCTTGAGTACGATATTCTCATT | + |
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Preference number: 6 (lower is better) Translates to: RRGRASAGCARDPLY*GRKQPTRLEYDILI Trigger: AATGAGAATATCGTACTCAAGACGGGTGGGCTGCTTGCGACCCAAATACAATGGGTCCCTCGCACATCCTGCACTCGCACGCCCCCTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS GCA 72 bp | TTTTCACAAACGGAGATGAGGCCGAGAGCAGCCAACTaGGACCACTCAAGAGAGGGCCTTCTGTACGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: FSQTEMRPRAAN*DHSREGLLYAQ Trigger: CTGAGCGTACAGAAGGCCCTCTCTTGAGTGGTCGCAGTTGGCTGCTCTCGGCCTCATCTCCGTTTGTGAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS CCA 72 bp | TTCAGCAAAGCCTCTCTCCAAACTTCAGCTGGGGCCTaGGAGGACCGGAATCTGGACGGGTTTTCACAAACG | + |
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Preference number: 6 (lower is better) Translates to: FSKASLQTSAGA*EDRNLDGFSQT Trigger: CGTTTGTGAAAACCCGTCCAGATTCCGGTCCTCCCAGGCCCCAGCTGAAGTTTGGAGAGAGGCTTTGCTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS CCA 72 bp | TTCTCCCGCCTTCGGGATCCTCTCTCGTATGATTTGTaGTTTGTGGGACCACAACAACCAGGCTTCCTCGAC | + |
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Preference number: 6 (lower is better) Translates to: FSRLRDPLSYDL*FVGPQQPGFLD Trigger: GTCGAGGAAGCCTGGTTGTTGTGGTCCCACAAACCACAAATCATACGAGAGAGGATCCCGAAGGCGGGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS CAA 72 bp | CTTTTCTCCCGCCTTCGGGATCCTCTCTCGTATGATTaGTGGTTTGTGGGACCACAACAACCAGGCTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: LFSRLRDPLSYD*WFVGPQQPGFL Trigger: GAGGAAGCCTGGTTGTTGTGGTCCCACAAACCACAAATCATACGAGAGAGGATCCCGAAGGCGGGAGAAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS TCA 72 bp | CTGACTTTTCTCCCGCCTTCGGGATCCTCTCTCGTATaGTTTGTGGTTTGTGGGACCACAACAACCAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: LTFLPPSGSSLV*FVVCGTTTTRL Trigger: AAGCCTGGTTGTTGTGGTCCCACAAACCACAAATCATACGAGAGAGGATCCCGAAGGCGGGAGAAAAGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS TCA 72 bp | ACCACCAAGCCACTAACTTTGACCCTGTTGGCCCACTaGTGGTTTAACTGGCTAATGGGGGCATCTTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: TTKPLTLTLLAH*WFNWLMGASWR Trigger: TCTCCAAGATGCCCCCATTAGCCAGTTAAACCATCAGTGGGCCAACAGGGTCAAAGTTAGTGGCTTGGTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS CAA 90 bp | ACTCAAGAGAGGGCCTTCTGTACGCTCAGCACCGTCCTAAAGACCTaGCGTATATTAACTCTTAAACCTATAGCCACTCTACAAGGGGTG | + |
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Preference number: 6 (lower is better) Translates to: TQERAFCTLSTVLKT*RILTLKPIATLQGV Trigger: CACCCCTTGTAGAGTGGCTATAGGTTTAAGAGTTAATATACGCAAGGTCTTTAGGACGGTGCTGAGCGTACAGAAGGCCCTCTCTTGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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| CDS CAA 72 bp | AGGGCCTTCTGTACGCTCAGCACCGTCCTAAAGACCTaGCGTATATTAACTCTTAAACCTATAGCCACTCTA | + |
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Preference number: 6 (lower is better) Translates to: RAFCTLSTVLKT*RILTLKPIATL Trigger: TAGAGTGGCTATAGGTTTAAGAGTTAATATACGCAAGGTCTTTAGGACGGTGCTGAGCGTACAGAAGGCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000409786.1 |
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