Pregenerated sensors for LINC01122 (Homo sapiens)
Ensembl gene IDs: ENSG00000233723Ensembl transcript IDs: ENST00000422723.5, ENST00000422793.2, ENST00000427421.5, ENST00000429095.5, ENST00000429664.6, ENST00000449448.6, ENST00000452840.5, ENST00000455219.8, ENST00000650056.1, ENST00000655072.1, ENST00000656135.1, ENST00000656193.1, ENST00000656381.1, ENST00000657130.1, ENST00000657378.1, ENST00000662396.1, ENST00000663407.1, ENST00000664741.1, ENST00000665429.1, ENST00000665478.1, ENST00000665525.1, ENST00000668410.1, ENST00000669630.1, ENST00000671194.1
Found 153 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | ACTGGCCCCTCTCCAAGGAGCTGGGCAGCAATCTGTGCTTTATGCTaGTGTGTGGTGGTGGCAATACCACTGGTGGGAGAGCCAGGAGGC | + |
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Preference number: 5 (lower is better) Translates to: TGPSPRSWAAICALC*CVVVAIPLVGEPGG Trigger: GCCTCCTGGCTCTCCCACCAGTGGTATTGCCACCACCACACACCAGCATAAAGCACAGATTGCTGCCCAGCTCCTTGGAGAGGGGCCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 15 transcripts: ENST00000422793.2 ENST00000427421.5 ENST00000429664.6 ENST00000449448.6 ENST00000452840.5 ENST00000650056.1 ENST00000656135.1 ENST00000656381.1 ENST00000657130.1 ENST00000664741.1 ENST00000665429.1 ENST00000665478.1 ENST00000665525.1 ENST00000668410.1 ENST00000671194.1 |
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| CDS TCA 90 bp | GGGAGAGCCAGGAGGCGGAGGCGTTCTTCTCAAGTAAGAAAGATCTaGAGACCAGTGGCCTTGGGGACGCACCCAGGCACCAAGAACTCC | + |
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Preference number: 5 (lower is better) Translates to: GRARRRRRSSQVRKI*RPVALGTHPGTKNS Trigger: GGAGTTCTTGGTGCCTGGGTGCGTCCCCAAGGCCACTGGTCTTCAGATCTTTCTTACTTGAGAAGAACGCCTCCGCCTCCTGGCTCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 15 transcripts: ENST00000422793.2 ENST00000427421.5 ENST00000429664.6 ENST00000449448.6 ENST00000452840.5 ENST00000650056.1 ENST00000656135.1 ENST00000656381.1 ENST00000657130.1 ENST00000664741.1 ENST00000665429.1 ENST00000665478.1 ENST00000665525.1 ENST00000668410.1 ENST00000671194.1 |
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| CDS CCA 90 bp | GCCCGGGCGCTTTTCTTCCCGCCGAACTCTAGCACCCAAGTTCGCTaGCGGATTTTGGACTCTGCCAAAGTGCTGAGTTCGTCGTTTACT | + |
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Preference number: 5 (lower is better) Translates to: ARALFFPPNSSTQVR*RILDSAKVLSSSFT Trigger: AGTAAACGACGAACTCAGCACTTTGGCAGAGTCCAAAATCCGCCAGCGAACTTGGGTGCTAGAGTTCGGCGGGAAGAAAAGCGCCCGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000422723.5 ENST00000656381.1 |
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| CDS TCA 90 bp | ACATACAGCTCCACAGAAGGGCTAACCCCGCCACACATGCATCCTTaGACACACAGGGCCCACCTTAGAGATTGTCTTGTTACCTTGGCT | + |
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Preference number: 5 (lower is better) Translates to: TYSSTEGLTPPHMHP*THRAHLRDCLVTLA Trigger: AGCCAAGGTAACAAGACAATCTCTAAGGTGGGCCCTGTGTGTTCAAGGATGCATGTGTGGCGGGGTTAGCCCTTCTGTGGAGCTGTATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655072.1 |
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| CDS CCA 90 bp | CAATCTGTGCTTTATGCTGGTGTGTGGTGGTGGCAATACCACTGGTaGGAGAGCCAGGAGGCGGAGGCGTTCTTCTCAAGTAAGAAAGAT | + |
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Preference number: 5 (lower is better) Translates to: QSVLYAGVWWWQYHW*ESQEAEAFFSSKKD Trigger: ATCTTTCTTACTTGAGAAGAACGCCTCCGCCTCCTGGCTCTCCCACCAGTGGTATTGCCACCACCACACACCAGCATAAAGCACAGATTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000422793.2 ENST00000427421.5 ENST00000429664.6 ENST00000449448.6 ENST00000452840.5 ENST00000650056.1 ENST00000656135.1 ENST00000656381.1 ENST00000657130.1 ENST00000664741.1 ENST00000665429.1 ENST00000665478.1 ENST00000665525.1 ENST00000668410.1 ENST00000671194.1 |
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| CDS GCA 90 bp | AGATTTGAGGGTAACATTCTGGATCTCGGTCCAAGCACTGCTTCTTaGCCTATAGCCAGAATCTTCTCATCCAGTGACAAGGGCAGGGCC | + |
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Preference number: 5 (lower is better) Translates to: RFEGNILDLGPSTAS*PIARIFSSSDKGRA Trigger: GGCCCTGCCCTTGTCACTGGATGAGAAGATTCTGGCTATAGGGCAAGAAGCAGTGCTTGGACCGAGATCCAGAATGTTACCCTCAAATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452840.5 |
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| CDS TCA 90 bp | CAAAGTGCTGAGTTCGTCGTTTACTTTGAAAGCCTGAAATATAACTaGTGTCCAACTGCAGGAAGGCGCACGGAATCGCCGCCACCATCC | + |
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Preference number: 5 (lower is better) Translates to: QSAEFVVYFESLKYN*CPTAGRRTESPPPS Trigger: GGATGGTGGCGGCGATTCCGTGCGCCTTCCTGCAGTTGGACATCAGTTATATTTCAGGCTTTCAAAGTAAACGACGAACTCAGCACTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000422723.5 |
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| CDS TCA 90 bp | TCTTGGAGAAGGGATTGTGCTCTGTACAGATGCATTCAGTCTTCTTaGAGCCTAAACTCTGCTTGGTGGGGCCAGGAAAGAGGAGGCATG | + |
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Preference number: 5 (lower is better) Translates to: SWRRDCALYRCIQSS*SLNSAWWGQERGGM Trigger: CATGCCTCCTCTTTCCTGGCCCCACCAAGCAGAGTTTAGGCTTCAAGAAGACTGAATGCATCTGTACAGAGCACAATCCCTTCTCCAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427421.5 |
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| CDS TCA 90 bp | TCCAAGCACTGCTTCTTGCCCTATAGCCAGAATCTTCTCATCCAGTaGCAAGGGCAGGGCCAGATAATCCATGGTACACAGACCCTGATT | + |
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Preference number: 5 (lower is better) Translates to: SKHCFLPYSQNLLIQ*QGQGQIIHGTQTLI Trigger: AATCAGGGTCTGTGTACCATGGATTATCTGGCCCTGCCCTTGTCACTGGATGAGAAGATTCTGGCTATAGGGCAAGAAGCAGTGCTTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452840.5 |
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| CDS TCA 90 bp | GCACAGACAACACAAACTGAGGTGTCTTTAGGCAGTCCGTTCAGATaGGTAACTCAGATCCTCTGCACAAGCCCCTCCCAGGGTAAAAGT | + |
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Preference number: 5 (lower is better) Translates to: AQTTQTEVSLGSPFR*VTQILCTSPSQGKS Trigger: ACTTTTACCCTGGGAGGGGCTTGTGCAGAGGATCTGAGTTACTCATCTGAACGGACTGCCTAAAGACACCTCAGTTTGTGTTGTCTGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000656381.1 ENST00000665478.1 |
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| CDS CCA 90 bp | AACTTTTCAATTCCTGACAAATGCACTGGCCCCTCTCCAAGGAGCTaGGCAGCAATCTGTGCTTTATGCTGGTGTGTGGTGGTGGCAATA | + |
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Preference number: 5 (lower is better) Translates to: NFSIPDKCTGPSPRS*AAICALCWCVVVAI Trigger: TATTGCCACCACCACACACCAGCATAAAGCACAGATTGCTGCCCAGCTCCTTGGAGAGGGGCCAGTGCATTTGTCAGGAATTGAAAAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 15 transcripts: ENST00000422793.2 ENST00000427421.5 ENST00000429664.6 ENST00000449448.6 ENST00000452840.5 ENST00000650056.1 ENST00000656135.1 ENST00000656381.1 ENST00000657130.1 ENST00000664741.1 ENST00000665429.1 ENST00000665478.1 ENST00000665525.1 ENST00000668410.1 ENST00000671194.1 |
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| CDS CCA 90 bp | AGAAATAGGCCTGCCTCAACAAAGATGCCAGGCTTATTCACAGGCTaGGAGCAGCCCGTGGGAAGCATAGACTTGCACTGTGATGAATTT | + |
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Preference number: 5 (lower is better) Translates to: RNRPASTKMPGLFTG*EQPVGSIDLHCDEF Trigger: AAATTCATCACAGTGCAAGTCTATGCTTCCCACGGGCTGCTCCCAGCCTGTGAATAAGCCTGGCATCTTTGTTGAGGCAGGCCTATTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000422793.2 ENST00000429664.6 ENST00000656381.1 ENST00000657130.1 ENST00000664741.1 ENST00000665429.1 ENST00000665478.1 ENST00000665525.1 ENST00000668410.1 |
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| CDS CCA 90 bp | CCTGTAGTGAAATCTGTTTCATATTTGCAATCAGTTTTCAGCTCCTaGAAGAATCCCAAATTGGTAAGTCCCCGGCCAGGGCGCGGGAGC | + |
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Preference number: 5 (lower is better) Translates to: PVVKSVSYLQSVFSS*KNPKLVSPRPGRGS Trigger: GCTCCCGCGCCCTGGCCGGGGACTTACCAATTTGGGATTCTTCCAGGAGCTGAAAACTGATTGCAAATATGAAACAGATTTCACTACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000449448.6 ENST00000656135.1 |
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| CDS GCA 90 bp | GAATTTCCAAGGCAGCAGCTGAAACCCTGGGTCACTCTTGTTCCTTaGAGTCAGAGAGGCATGTTCTTGTGGTCACCACCAGTATTATTC | + |
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Preference number: 5 (lower is better) Translates to: EFPRQQLKPWVTLVP*SQRGMFLWSPPVLF Trigger: GAATAATACTGGTGGTGACCACAAGAACATGCCTCTCTGACTGCAAGGAACAAGAGTGACCCAGGGTTTCAGCTGCTGCCTTGGAAATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000422793.2 ENST00000429664.6 ENST00000656381.1 ENST00000657130.1 ENST00000664741.1 ENST00000665429.1 ENST00000665478.1 ENST00000665525.1 ENST00000668410.1 ENST00000671194.1 |
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| CDS GCA 90 bp | ACAGCTGCCTTGATGCTGCTCTCCATGCTTCCAGCCAACACTTTGTaGAGGAGAAAGTCCTCGAACTGGCTCCAAAACTTTTCAATTCCT | + |
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Preference number: 5 (lower is better) Translates to: TAALMLLSMLPANTL*RRKSSNWLQNFSIP Trigger: AGGAATTGAAAAGTTTTGGAGCCAGTTCGAGGACTTTCTCCTGCACAAAGTGTTGGCTGGAAGCATGGAGAGCAGCATCAAGGCAGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656135.1 |
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| CDS CCA 90 bp | ATAGACTTGCACTGTGATGAATTTCCAAGGCAGCAGCTGAAACCCTaGGTCACTCTTGTTCCTTGCAGTCAGAGAGGCATGTTCTTGTGG | + |
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Preference number: 5 (lower is better) Translates to: IDLHCDEFPRQQLKP*VTLVPCSQRGMFLW Trigger: CCACAAGAACATGCCTCTCTGACTGCAAGGAACAAGAGTGACCCAGGGTTTCAGCTGCTGCCTTGGAAATTCATCACAGTGCAAGTCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000422793.2 ENST00000429664.6 ENST00000656381.1 ENST00000657130.1 ENST00000664741.1 ENST00000665429.1 ENST00000665478.1 ENST00000665525.1 ENST00000668410.1 |
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| CDS CCA 90 bp | TGCTGCACAGCTCAGCTCAGAGATTTGGACCAGCACACTACATCCTaGGAGACGCTGTACCCACAAATAAAATGTGGAAGAAAGAACTGG | + |
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Preference number: 5 (lower is better) Translates to: CCTAQLRDLDQHTTS*ETLYPQIKCGRKNW Trigger: CCAGTTCTTTCTTCCACATTTTATTTGTGGGTACAGCGTCTCCCAGGATGTAGTGTGCTGGTCCAAATCTCTGAGCTGAGCTGTGCAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669630.1 |
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| CDS TCA 90 bp | TTGGACTCTGCCAAAGTGCTGAGTTCGTCGTTTACTTTGAAAGCCTaGAATATAACTGATGTCCAACTGCAGGAAGGCGCACGGAATCGC | + |
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Preference number: 5 (lower is better) Translates to: LDSAKVLSSSFTLKA*NITDVQLQEGARNR Trigger: GCGATTCCGTGCGCCTTCCTGCAGTTGGACATCAGTTATATTTCAGGCTTTCAAAGTAAACGACGAACTCAGCACTTTGGCAGAGTCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000422723.5 |
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| CDS GCA 90 bp | CCACTGGGTGGCTCAGGGACTCAGGGACTTAGGATACTTCCATTTTaGAATTCTCCCTCTAAGGATCTTCACTTCTTAAGTGTCACATCC | + |
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Preference number: 5 (lower is better) Translates to: PLGGSGTQGLRILPF*NSPSKDLHFLSVTS Trigger: GGATGTGACACTTAAGAAGTGAAGATCCTTAGAGGGAGAATTGCAAAATGGAAGTATCCTAAGTCCCTGAGTCCCTGAGCCACCCAGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665525.1 |
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| CDS CCA 90 bp | CATCATTTGTCAACCCCTGCTCAGGACAATTCAACCAACGGACTGTaGAAAGAAAGTAATGTATGCCCAGCCACAGCAGAGAGTAAGTGC | + |
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Preference number: 5 (lower is better) Translates to: HHLSTPAQDNSTNGL*KESNVCPATAESKC Trigger: GCACTTACTCTCTGCTGTGGCTGGGCATACATTACTTTCTTTCCACAGTCCGTTGGTTGAATTGTCCTGAGCAGGGGTTGACAAATGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000452840.5 |
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| CDS CCA 90 bp | CTGAGGAGGAAACAGTTCAAGAGATGGCCAAAACTTTACACCAAGTaGGGACCCAAGAACCTTTCAGATGAAGAGGTCTCTAAAGGCGGA | + |
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Preference number: 5 (lower is better) Translates to: LRRKQFKRWPKLYTK*GPKNLSDEEVSKGG Trigger: TCCGCCTTTAGAGACCTCTTCATCTGAAAGGTTCTTGGGTCCCCACTTGGTGTAAAGTTTTGGCCATCTCTTGAACTGTTTCCTCCTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655072.1 |
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| CDS TCA 90 bp | CTGCTTGCCTTGCAGCTCCCACACACCTTCACAAAGGCTTTATACTaGGGAGGAAACAGTTCAAGAGATGGCCAAAACTTTACACCAAGT | + |
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Preference number: 5 (lower is better) Translates to: LLALQLPHTFTKALY*GGNSSRDGQNFTPS Trigger: ACTTGGTGTAAAGTTTTGGCCATCTCTTGAACTGTTTCCTCCTCAGTATAAAGCCTTTGTGAAGGTGTGTGGGAGCTGCAAGGCAAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655072.1 |
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| CDS TCA 90 bp | ATGATTCTGCTCAGTGCAGAGTGCCAGTCGACCTCTCCTGTGCAGTaGACACGTGACGAAGTGTGTAGAACAAATCAAAAAGTGACTTTC | + |
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Preference number: 5 (lower is better) Translates to: MILLSAECQSTSPVQ*TRDEVCRTNQKVTF Trigger: GAAAGTCACTTTTTGATTTGTTCTACACACTTCGTCACGTGTTCACTGCACAGGAGAGGTCGACTGGCACTCTGCACTGAGCAGAATCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000656135.1 ENST00000657130.1 ENST00000665478.1 |
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| CDS CCA 90 bp | CCCTGGGTCACTCTTGTTCCTTGCAGTCAGAGAGGCATGTTCTTGTaGTCACCACCAGTATTATTCAATGCAGATTCTTTGGCAAACCAT | + |
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Preference number: 5 (lower is better) Translates to: PWVTLVPCSQRGMFL*SPPVLFNADSLANH Trigger: ATGGTTTGCCAAAGAATCTGCATTGAATAATACTGGTGGTGACCACAAGAACATGCCTCTCTGACTGCAAGGAACAAGAGTGACCCAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000422793.2 ENST00000429664.6 ENST00000656381.1 ENST00000657130.1 ENST00000664741.1 ENST00000665429.1 ENST00000665478.1 ENST00000665525.1 ENST00000668410.1 ENST00000671194.1 |
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| CDS CCA 90 bp | TATACCTATGCACACACAGGCTTTGTGTTTTGGATAATCCTCCACTaGGTGGCTCAGGGACTCAGGGACTTAGGATACTTCCATTTTGCA | + |
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Preference number: 5 (lower is better) Translates to: YTYAHTGFVFWIILH*VAQGLRDLGYFHFA Trigger: TGCAAAATGGAAGTATCCTAAGTCCCTGAGTCCCTGAGCCACCCAGTGGAGGATTATCCAAAACACAAAGCCTGTGTGTGCATAGGTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665525.1 |
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| CDS TCA 90 bp | GGTGGTAGGAGGAATATAGAAGCTAGAAGCAAGGCTTCTACTCCTTaGACAGTCTCTCATTCCCAGCATCTTAGTTTAGCTATGGAGGCT | + |
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Preference number: 5 (lower is better) Translates to: GGRRNIEARSKASTP*TVSHSQHLSLAMEA Trigger: AGCCTCCATAGCTAAACTAAGATGCTGGGAATGAGAGACTGTTCAAGGAGTAGAAGCCTTGCTTCTAGCTTCTATATTCCTCCTACCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656381.1 ENST00000665478.1 |
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| CDS GCA 90 bp | TCCAACGCTCTGTGTGAGATAATCATGCTTCCAGCCAACACTTTGTaGAGGAGAAAGTCCTCGAACTGGCTCCAAAACTTTTCAATTCCT | + |
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Preference number: 5 (lower is better) Translates to: SNALCEIIMLPANTL*RRKSSNWLQNFSIP Trigger: AGGAATTGAAAAGTTTTGGAGCCAGTTCGAGGACTTTCTCCTGCACAAAGTGTTGGCTGGAAGCATGATTATCTCACACAGAGCGTTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000427421.5 ENST00000449448.6 ENST00000452840.5 ENST00000650056.1 |
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| CDS GCA 90 bp | CCTTTCTTGATAAGCCCCATGGTTTCCTTCTTGGAGAAGGGATTGTaGTCTGTACAGATGCATTCAGTCTTCTTGAAGCCTAAACTCTGC | + |
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Preference number: 5 (lower is better) Translates to: PFLISPMVSFLEKGL*SVQMHSVFLKPKLC Trigger: GCAGAGTTTAGGCTTCAAGAAGACTGAATGCATCTGTACAGAGCACAATCCCTTCTCCAAGAAGGAAACCATGGGGCTTATCAAGAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427421.5 |
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| CDS CCA 90 bp | ATCACTGCAGGTGTACACATCACTAATGCCATCCTTTCTTATCACTaGGTGCTGGAAACTCAGGTAAACCAGGGAGGAGAAAGTATCTTC | + |
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Preference number: 5 (lower is better) Translates to: ITAGVHITNAILSYH*VLETQVNQGGESIF Trigger: GAAGATACTTTCTCCTCCCTGGTTTACCTGAGTTTCCAGCACCCAGTGATAAGAAAGGATGGCATTAGTGATGTGTACACCTGCAGTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000427421.5 ENST00000452840.5 ENST00000650056.1 |
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| CDS CCA 90 bp | CTCCAAAGGTGCTGTGGTTTAGTGGTGGAGTTTTGTGGTGGGCTTTaGAGTACAACCGAACATTCTTCAAATGCTAACTCTGCAATCTAC | + |
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Preference number: 5 (lower is better) Translates to: LQRCCGLVVEFCGGL*STTEHSSNANSAIY Trigger: GTAGATTGCAGAGTTAGCATTTGAAGAATGTTCGGTTGTACTCCAAAGCCCACCACAAAACTCCACCACTAAACCACAGCACCTTTGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656381.1 ENST00000665478.1 |
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| CDS TCA 90 bp | AAACAAGTCTGGAAGGGCTTCATGGGGAAAGGTGGAACTCTGCCTTaGACTTATCGGCTGATCTTTGATAATCACTATGGTTCCTTCATG | + |
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Preference number: 5 (lower is better) Translates to: KQVWKGFMGKGGTLP*TYRLIFDNHYGSFM Trigger: CATGAAGGAACCATAGTGATTATCAAAGATCAGCCGATAAGTTCAAGGCAGAGTTCCACCTTTCCCCATGAAGCCCTTCCAGACTTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000452840.5 |
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| CDS TCA 90 bp | AATCTCTTGCATGTGGCCTGCACTTTTGCCTTATCCCCTGCATCCTaGATGAAAGATAAGAGGAAGTATTTCCAAAGTGGGCACAGAGAA | + |
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Preference number: 5 (lower is better) Translates to: NLLHVACTFALSPAS*MKDKRKYFQSGHRE Trigger: TTCTCTGTGCCCACTTTGGAAATACTTCCTCTTATCTTTCATTCAGGATGCAGGGGATAAGGCAAAAGTGCAGGCCACATGCAAGAGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655072.1 |
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| CDS GCA 90 bp | TGGCAAACCATGTGTTATTGCTTCATGCTTCCAGCCAACACTTTGTaGAGGAGAAAGTCCTCGAACTGGCTCCAAAACTTTTCAATTCCT | + |
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Preference number: 5 (lower is better) Translates to: WQTMCYCFMLPANTL*RRKSSNWLQNFSIP Trigger: AGGAATTGAAAAGTTTTGGAGCCAGTTCGAGGACTTTCTCCTGCACAAAGTGTTGGCTGGAAGCATGAAGCAATAACACATGGTTTGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENST00000422793.2 ENST00000429664.6 ENST00000656381.1 ENST00000657130.1 ENST00000664741.1 ENST00000665429.1 ENST00000665478.1 ENST00000665525.1 ENST00000668410.1 |
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| CDS CCA 90 bp | AGATTTCATCGCAGTAATGCAAGACCACAGTATGTAAATGATCCCTaGTCCCTTAAGTGTCACATCCTAGCCTGGCAGTCAGATGTTTTC | + |
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Preference number: 5 (lower is better) Translates to: RFHRSNARPQYVNDP*SLKCHILAWQSDVF Trigger: GAAAACATCTGACTGCCAGGCTAGGATGTGACACTTAAGGGACCAGGGATCATTTACATACTGTGGTCTTGCATTACTGCGATGAAATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000455219.8 ENST00000657378.1 ENST00000662396.1 ENST00000663407.1 ENST00000669630.1 |
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| CDS CCA 90 bp | CCAGCACACTACATCCTGGGAGACGCTGTACCCACAAATAAAATGTaGAAGAAAGAACTGGAAGAGTATTGCTCCAAATGTCTCTTGAAG | + |
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Preference number: 5 (lower is better) Translates to: PAHYILGDAVPTNKM*KKELEEYCSKCLLK Trigger: CTTCAAGAGACATTTGGAGCAATACTCTTCCAGTTCTTTCTTCCACATTTTATTTGTGGGTACAGCGTCTCCCAGGATGTAGTGTGCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669630.1 |
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| CDS TCA 90 bp | ATATGGTTCAGTGTCGGCGTTGAACAGATTCCATATAAATTGCAGTaGCTTCTAAGACATCTTCATTTGTTTCCCTTCCCCAACCCACCC | + |
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Preference number: 5 (lower is better) Translates to: IWFSVGVEQIPYKLQ*LLRHLHLFPFPNPP Trigger: GGGTGGGTTGGGGAAGGGAAACAAATGAAGATGTCTTAGAAGTCACTGCAATTTATATGGAATCTGTTCAACGCCGACACTGAACCATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427421.5 |
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| CDS TCA 90 bp | TCTGTCGTGGATCACATAGCTGACATTGCCAATAAGTATAAGATATaGTTTCAGGCTCCATCATTGTCACTCTGGGAAGAGAGCACAGTC | + |
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Preference number: 5 (lower is better) Translates to: SVVDHIADIANKYKI*FQAPSLSLWEESTV Trigger: GACTGTGCTCTCTTCCCAGAGTGACAATGATGGAGCCTGAAATCATATCTTATACTTATTGGCAATGTCAGCTATGTGATCCACGACAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657130.1 |
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| CDS GCA 90 bp | CAGTCAGAGAGGCATGTTCTTGTGGTCACCACCAGTATTATTCAATaGAGATTCTTTGGCAAACCATGTGTTATTGCTTCATGCTTCCAG | + |
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Preference number: 5 (lower is better) Translates to: QSERHVLVVTTSIIQ*RFFGKPCVIASCFQ Trigger: CTGGAAGCATGAAGCAATAACACATGGTTTGCCAAAGAATCTGCATTGAATAATACTGGTGGTGACCACAAGAACATGCCTCTCTGACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000422793.2 ENST00000429664.6 ENST00000656381.1 ENST00000657130.1 ENST00000664741.1 ENST00000665429.1 ENST00000665478.1 ENST00000665525.1 ENST00000668410.1 |
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| CDS CCA 90 bp | ACAGCACACTACATCCTGGGAGACGCTGTACCCACAAATAAAATGTaGAAGAAAGAACTGGAAGAGTATTGCTCCAAATGTCTCTTGAAG | + |
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Preference number: 5 (lower is better) Translates to: TAHYILGDAVPTNKM*KKELEEYCSKCLLK Trigger: CTTCAAGAGACATTTGGAGCAATACTCTTCCAGTTCTTTCTTCCACATTTTATTTGTGGGTACAGCGTCTCCCAGGATGTAGTGTGCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000455219.8 ENST00000657378.1 ENST00000662396.1 ENST00000663407.1 |
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| CDS GCA 90 bp | TGTTTGACTTCATTTCCCCATCTCACTTGCCTAGATAATTTTAACTaGTCTAGTATCAGATCTTCCTGCCATCCATCATTCCCAGCACCT | + |
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Preference number: 5 (lower is better) Translates to: CLTSFPHLTCLDNFN*SSIRSSCHPSFPAP Trigger: AGGTGCTGGGAATGATGGATGGCAGGAAGATCTGATACTAGAGCAGTTAAAATTATCTAGGCAAGTGAGATGGGGAAATGAAGTCAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000657378.1 ENST00000662396.1 ENST00000663407.1 |
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| CDS GCA 90 bp | CAGTCAGAGAGGCATGTTCTTGTGGTCACCACCAGTATTATTCAATaGAGATTCTTTGGCAAACCATGTGTTATTGCTTCTCACATTTGG | + |
|
Preference number: 5 (lower is better) Translates to: QSERHVLVVTTSIIQ*RFFGKPCVIASHIW Trigger: CCAAATGTGAGAAGCAATAACACATGGTTTGCCAAAGAATCTGCATTGAATAATACTGGTGGTGACCACAAGAACATGCCTCTCTGACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671194.1 |
||
| CDS CCA 90 bp | GCATGTTCTTGTGGTCACCACCAGTATTATTCAATGCAGATTCTTTaGCAAACCATGTGTTATTGCTTCATGCTTCCAGCCAACACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: ACSCGHHQYYSMQIL*QTMCYCFMLPANTL Trigger: CAAAGTGTTGGCTGGAAGCATGAAGCAATAACACATGGTTTGCCAAAGAATCTGCATTGAATAATACTGGTGGTGACCACAAGAACATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000422793.2 ENST00000429664.6 ENST00000656381.1 ENST00000657130.1 ENST00000664741.1 ENST00000665429.1 ENST00000665478.1 ENST00000665525.1 ENST00000668410.1 |
||
| CDS TCA 90 bp | CATAAACCTCTTCAGCTTAATTGCCTACAACCTATCATGACTTCCTaGTCTCATGATGCACTCTCATGTCACTATGCTTTTCTTTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: HKPLQLNCLQPIMTS*SHDALSCHYAFLSA Trigger: GGCAGAAAGAAAAGCATAGTGACATGAGAGTGCATCATGAGATCAGGAAGTCATGATAGGTTGTAGGCAATTAAGCTGAAGAGGTTTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000657378.1 ENST00000662396.1 ENST00000663407.1 |
||
| CDS TCA 90 bp | AAAGGGACAGCTCTCATAAAAATGTGGTCACATGCTGAATTCACTTaGGCCTGTATTCTCAGGCAGAAGCTATGTGAAATACAACGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KGTALIKMWSHAEFT*ACILRQKLCEIQRS Trigger: TGAACGTTGTATTTCACATAGCTTCTGCCTGAGAATACAGGCTCAAGTGAATTCAGCATGTGACCACATTTTTATGAGAGCTGTCCCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000656135.1 |
||
| CDS GCA 90 bp | AACTCACGGCACCAAGAACTCCACGGTAGGGGGCAGGTTCTTAACTaGTTTCAATTTTCCTGTAAAGAAGTATTTAGAGTTGATAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: NSRHQELHGRGQVLN*FQFSCKEVFRVDNF Trigger: GAAATTATCAACTCTAAATACTTCTTTACAGGAAAATTGAAAGCAGTTAAGAACCTGCCCCCTACCGTGGAGTTCTTGGTGCCGTGAGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 16 transcripts: ENST00000422723.5 ENST00000422793.2 ENST00000427421.5 ENST00000429095.5 ENST00000429664.6 ENST00000449448.6 ENST00000452840.5 ENST00000650056.1 ENST00000656135.1 ENST00000656381.1 ENST00000657130.1 ENST00000664741.1 ENST00000665429.1 ENST00000665478.1 ENST00000665525.1 ENST00000668410.1 |
||
| CDS GCA 90 bp | TTTTTAAACATCGTGTGTGTGTGTGTGCAGGTATATGCTGGCGTGTaGACCACTGTTCATTTCTCACAGAAGATAGTCACGTTTATTGAT | + |
|
Preference number: 5 (lower is better) Translates to: FLNIVCVCVQVYAGV*TTVHFSQKIVTFID Trigger: ATCAATAAACGTGACTATCTTCTGTGAGAAATGAACAGTGGTGCACACGCCAGCATATACCTGCACACACACACACACGATGTTTAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000655072.1 |
||
| CDS CCA 90 bp | ACAACTGACATAGCAGTCTCAGAAACTCACATATACAAGGCATGTTaGTTGTTGCTATTTGATGGTAATCCTGGACCTCCTGCACTTTAT | + |
|
Preference number: 5 (lower is better) Translates to: TTDIAVSETHIYKAC*LLLFDGNPGPPALY Trigger: ATAAAGTGCAGGAGGTCCAGGATTACCATCAAATAGCAACAACCAACATGCCTTGTATATGTGAGTTTCTGAGACTGCTATGTCAGTTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656193.1 |
||
| CDS CCA 90 bp | CTTAGTGAATGTGTATGTTTTAGGCTCTCTTCTCCTCTTAGTAGATaGGCATGTTCCCTCTTGCTTTTCGTAGCTCATCAATGTATCAAC | + |
|
Preference number: 5 (lower is better) Translates to: LSECVCFRLSSPLSR*ACSLLLFVAHQCIN Trigger: GTTGATACATTGATGAGCTACGAAAAGCAAGAGGGAACATGCCCATCTACTAAGAGGAGAAGAGAGCCTAAAACATACACATTCACTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000656135.1 ENST00000671194.1 |
||
| CDS CCA 90 bp | GCATGTTCTTGTGGTCACCACCAGTATTATTCAATGCAGATTCTTTaGCAAACCATGTGTTATTGCTTCTCACATTTGGCTTTCTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ACSCGHHQYYSMQIL*QTMCYCFSHLAFSS Trigger: GGAAGAGAAAGCCAAATGTGAGAAGCAATAACACATGGTTTGCCAAAGAATCTGCATTGAATAATACTGGTGGTGACCACAAGAACATGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671194.1 |
||
| CDS TCA 90 bp | TCCCTCTTGCTTTTCGTAGCTCATCAATGTATCAACCTTTCCAAGTaGAACGATAAATTAGAGAGACAAACATGCTTCCAGCCAACACTT | + |
|
Preference number: 5 (lower is better) Translates to: SLLLFVAHQCINLSK*NDKLERQTCFQPTL Trigger: AAGTGTTGGCTGGAAGCATGTTTGTCTCTCTAATTTATCGTTTCACTTGGAAAGGTTGATACATTGATGAGCTACGAAAAGCAAGAGGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671194.1 |
||
| CDS CCA 90 bp | CCTGTAGTGAAATCTGTTTCATATTTGCAATCAGTTTTCAGCTCCTaGAAGAATCCCAAATTGGTAAGTCCCTGTATACCTATGCACACA | + |
|
Preference number: 5 (lower is better) Translates to: PVVKSVSYLQSVFSS*KNPKLVSPCIPMHT Trigger: TGTGTGCATAGGTATACAGGGACTTACCAATTTGGGATTCTTCCAGGAGCTGAAAACTGATTGCAAATATGAAACAGATTTCACTACAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665525.1 |
||
| CDS GCA 90 bp | TATTCCTTCTCTTCTGCATATGATATGTCCAGTTTGGGACAGAGGTaGACATGCTTAAGTCAATCTGATTATGCATTAGGTCCTTACTTT | + |
|
Preference number: 5 (lower is better) Translates to: YSFSSAYDMSSLGQR*TCLSQSDYALGPYF Trigger: AAAGTAAGGACCTAATGCATAATCAGATTGACTTAAGCATGTGCACCTCTGTCCCAAACTGGACATATCATATGCAGAAGAGAAGGAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656135.1 |
||
| CDS GCA 90 bp | GCCTCATTCATCCAAGCTAACCTGAATGGGGAGAGTCTATGTGGCTaGACATTTAAATACATAAATAAAATGCGTATTTGTGTGAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: ASFIQANLNGESLCG*TFKYINKMRICVRS Trigger: ACTTCTCACACAAATACGCATTTTATTTATGTATTTAAATGTGCAGCCACATAGACTCTCCCCATTCAGGTTAGCTTGGATGAATGAGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656135.1 |
||
| CDS TCA 90 bp | GTTTCTCAACCATCAGAGGCAATGTTAGTTGGTGTATACATTTTATaGAATGGTCTCCTTGCATTCTGCAGTTCTTCCTGTTCTTTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: VSQPSEAMLVGVYIL*NGLLAFCSSSCSLK Trigger: TTTTAAAGAACAGGAAGAACTGCAGAATGCAAGGAGACCATTTCATAAAATGTATACACCAACTAACATTGCCTCTGATGGTTGAGAAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000669630.1 |
||
| CDS CCA 90 bp | CCTGTAGTGAAATCTGTTTCATATTTGCAATCAGTTTTCAGCTCCTaGAAGAATCCCAAATTGGTAAGTCCCTGTTTTCTGATGATAATA | + |
|
Preference number: 5 (lower is better) Translates to: PVVKSVSYLQSVFSS*KNPKLVSPCFLMII Trigger: TATTATCATCAGAAAACAGGGACTTACCAATTTGGGATTCTTCCAGGAGCTGAAAACTGATTGCAAATATGAAACAGATTTCACTACAGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665429.1 |
||
| CDS TCA 90 bp | TGGCCGCAAAGGATGCCACTATATTATACAATACCATATAAAAACTaGGATTTACAGTTATGCCCTTCTGCCATCAAAATAAGAGAATGT | + |
|
Preference number: 5 (lower is better) Translates to: WPQRMPLYYTIPYKN*DLQLCPSAIKIREC Trigger: ACATTCTCTTATTTTGATGGCAGAAGGGCATAACTGTAAATCTCAGTTTTTATATGGTATTGTATAATATAGTGGCATCCTTTGCGGCCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000452840.5 |
||
| CDS CCA 72 bp | CAGGAACAGGGTGCACAGTCAAGGCAACCCCAAAAATaGCCTCTCTCCCGGCCGCGCCTGCAAAGTCGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: QEQGAQSRQPQK*PLSRPRLQSRP Trigger: AGGACGACTTTGCAGGCGCGGCCGGGAGAGAGGCCATTTTTGGGGTTGCCTTGACTGTGCACCCTGTTCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000452840.5 |
||
| CDS CCA 72 bp | GGGCAGCAATCTGTGCTTTATGCTGGTGTGTGGTGGTaGCAATACCACTGGTGGGAGAGCCAGGAGGCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GQQSVLYAGVWW*QYHWWESQEAE Trigger: CTCCGCCTCCTGGCTCTCCCACCAGTGGTATTGCCACCACCACACACCAGCATAAAGCACAGATTGCTGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000422793.2 ENST00000427421.5 ENST00000429664.6 ENST00000449448.6 ENST00000452840.5 ENST00000650056.1 ENST00000656135.1 ENST00000656381.1 ENST00000657130.1 ENST00000664741.1 ENST00000665429.1 ENST00000665478.1 ENST00000665525.1 ENST00000668410.1 ENST00000671194.1 |
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| CDS CCA 72 bp | GCTGGGCAGCAATCTGTGCTTTATGCTGGTGTGTGGTaGTGGCAATACCACTGGTGGGAGAGCCAGGAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: AGQQSVLYAGVW*WQYHWWESQEA Trigger: CGCCTCCTGGCTCTCCCACCAGTGGTATTGCCACCACCACACACCAGCATAAAGCACAGATTGCTGCCCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000422793.2 ENST00000427421.5 ENST00000429664.6 ENST00000449448.6 ENST00000452840.5 ENST00000650056.1 ENST00000656135.1 ENST00000656381.1 ENST00000657130.1 ENST00000664741.1 ENST00000665429.1 ENST00000665478.1 ENST00000665525.1 ENST00000668410.1 ENST00000671194.1 |
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| CDS CCA 72 bp | GGAGCTGGGCAGCAATCTGTGCTTTATGCTGGTGTGTaGTGGTGGCAATACCACTGGTGGGAGAGCCAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GAGQQSVLYAGV*WWQYHWWESQE Trigger: CTCCTGGCTCTCCCACCAGTGGTATTGCCACCACCACACACCAGCATAAAGCACAGATTGCTGCCCAGCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000422793.2 ENST00000427421.5 ENST00000429664.6 ENST00000449448.6 ENST00000452840.5 ENST00000650056.1 ENST00000656135.1 ENST00000656381.1 ENST00000657130.1 ENST00000664741.1 ENST00000665429.1 ENST00000665478.1 ENST00000665525.1 ENST00000668410.1 ENST00000671194.1 |
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| CDS GCA 72 bp | CCTGCATCTCCAGAAATAGGCCTGCCTCAACAAAGATaGCAGGCTTATTCACAGGCTGGGAGCAGCCCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PASPEIGLPQQR*QAYSQAGSSPW Trigger: CCACGGGCTGCTCCCAGCCTGTGAATAAGCCTGGCATCTTTGTTGAGGCAGGCCTATTTCTGGAGATGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000422793.2 ENST00000429664.6 ENST00000656381.1 ENST00000657130.1 ENST00000664741.1 ENST00000665429.1 ENST00000665478.1 ENST00000665525.1 ENST00000668410.1 |
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| CDS CCA 72 bp | CTTTATGCTGGTGTGTGGTGGTGGCAATACCACTGGTaGGAGAGCCAGGAGGCGGAGGCGTTCTTCTCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: LYAGVWWWQYHW*ESQEAEAFFSS Trigger: ACTTGAGAAGAACGCCTCCGCCTCCTGGCTCTCCCACCAGTGGTATTGCCACCACCACACACCAGCATAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000422793.2 ENST00000427421.5 ENST00000429664.6 ENST00000449448.6 ENST00000452840.5 ENST00000650056.1 ENST00000656135.1 ENST00000656381.1 ENST00000657130.1 ENST00000664741.1 ENST00000665429.1 ENST00000665478.1 ENST00000665525.1 ENST00000668410.1 ENST00000671194.1 |
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| CDS CAA 90 bp | CCAGGCTTATTCACAGGCTGGGAGCAGCCCGTGGGAAGCATAGACTaGCACTGTGATGAATTTCCAAGGCAGCAGCTGAAACCCTGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: PGLFTGWEQPVGSID*HCDEFPRQQLKPWV Trigger: GACCCAGGGTTTCAGCTGCTGCCTTGGAAATTCATCACAGTGCAAGTCTATGCTTCCCACGGGCTGCTCCCAGCCTGTGAATAAGCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000422793.2 ENST00000429664.6 ENST00000656381.1 ENST00000657130.1 ENST00000664741.1 ENST00000665429.1 ENST00000665478.1 ENST00000665525.1 ENST00000668410.1 |
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| CDS CCA 72 bp | CCTGCCTCAACAAAGATGCCAGGCTTATTCACAGGCTaGGAGCAGCCCGTGGGAAGCATAGACTTGCACTGT | + |
|
Preference number: 6 (lower is better) Translates to: PASTKMPGLFTG*EQPVGSIDLHC Trigger: ACAGTGCAAGTCTATGCTTCCCACGGGCTGCTCCCAGCCTGTGAATAAGCCTGGCATCTTTGTTGAGGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000422793.2 ENST00000429664.6 ENST00000656381.1 ENST00000657130.1 ENST00000664741.1 ENST00000665429.1 ENST00000665478.1 ENST00000665525.1 ENST00000668410.1 |
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| CDS GCA 72 bp | AGGCAGCAGCTGAAACCCTGGGTCACTCTTGTTCCTTaGAGTCAGAGAGGCATGTTCTTGTGGTCACCACCA | + |
|
Preference number: 6 (lower is better) Translates to: RQQLKPWVTLVP*SQRGMFLWSPP Trigger: TGGTGGTGACCACAAGAACATGCCTCTCTGACTGCAAGGAACAAGAGTGACCCAGGGTTTCAGCTGCTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000422793.2 ENST00000429664.6 ENST00000656381.1 ENST00000657130.1 ENST00000664741.1 ENST00000665429.1 ENST00000665478.1 ENST00000665525.1 ENST00000668410.1 ENST00000671194.1 |
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| CDS GCA 72 bp | AATGGCAGGGCGAGGGTAACATATGATTCTGCTCAGTaGAGAGTGCCAGTCGACCTCTCCTGTGCAGTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: NGRARVTYDSAQ*RVPVDLSCAVN Trigger: GTTCACTGCACAGGAGAGGTCGACTGGCACTCTGCACTGAGCAGAATCATATGTTACCCTCGCCCTGCCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000656135.1 ENST00000657130.1 ENST00000665478.1 |
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| CDS CCA 72 bp | ATTCCTGACAAATGCACTGGCCCCTCTCCAAGGAGCTaGGCAGCAATCTGTGCTTTATGCTGGTGTGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: IPDKCTGPSPRS*AAICALCWCVV Trigger: CACCACACACCAGCATAAAGCACAGATTGCTGCCCAGCTCCTTGGAGAGGGGCCAGTGCATTTGTCAGGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 15 transcripts: ENST00000422793.2 ENST00000427421.5 ENST00000429664.6 ENST00000449448.6 ENST00000452840.5 ENST00000650056.1 ENST00000656135.1 ENST00000656381.1 ENST00000657130.1 ENST00000664741.1 ENST00000665429.1 ENST00000665478.1 ENST00000665525.1 ENST00000668410.1 ENST00000671194.1 |
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| CDS CCA 72 bp | CTTTTCTTCCCGCCGAACTCTAGCACCCAAGTTCGCTaGCGGATTTTGGACTCTGCCAAAGTGCTGAGTTCG | + |
|
Preference number: 6 (lower is better) Translates to: LFFPPNSSTQVR*RILDSAKVLSS Trigger: CGAACTCAGCACTTTGGCAGAGTCCAAAATCCGCCAGCGAACTTGGGTGCTAGAGTTCGGCGGGAAGAAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000422723.5 ENST00000656381.1 |
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| CDS CAA 72 bp | AAGGCAGCAGCTGAAACCCTGGGTCACTCTTGTTCCTaGCAGTCAGAGAGGCATGTTCTTGTGGTCACCACC | + |
|
Preference number: 6 (lower is better) Translates to: KAAAETLGHSCS*QSERHVLVVTT Trigger: GGTGGTGACCACAAGAACATGCCTCTCTGACTGCAAGGAACAAGAGTGACCCAGGGTTTCAGCTGCTGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000422793.2 ENST00000429664.6 ENST00000656381.1 ENST00000657130.1 ENST00000664741.1 ENST00000665429.1 ENST00000665478.1 ENST00000665525.1 ENST00000668410.1 ENST00000671194.1 |
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| CDS CAA 72 bp | CCGCCGAACTCTAGCACCCAAGTTCGCTGGCGGATTTaGGACTCTGCCAAAGTGCTGAGTTCGTCGTTTACT | + |
|
Preference number: 6 (lower is better) Translates to: PPNSSTQVRWRI*DSAKVLSSSFT Trigger: AGTAAACGACGAACTCAGCACTTTGGCAGAGTCCAAAATCCGCCAGCGAACTTGGGTGCTAGAGTTCGGCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000422723.5 ENST00000656381.1 |
||
| CDS TCA 72 bp | TCCACAGAAGGGCTAACCCCGCCACACATGCATCCTTaGACACACAGGGCCCACCTTAGAGATTGTCTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: STEGLTPPHMHP*THRAHLRDCLV Trigger: AACAAGACAATCTCTAAGGTGGGCCCTGTGTGTTCAAGGATGCATGTGTGGCGGGGTTAGCCCTTCTGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655072.1 |
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| CDS GCA 72 bp | ACATATCTTCTGGACTCTCCGGTAGCCTTCCACTCTTaGATAGTAGACAGAGGCTGCGTGTTCCTCTGCACC | + |
|
Preference number: 6 (lower is better) Translates to: TYLLDSPVAFHS*IVDRGCVFLCT Trigger: GGTGCAGAGGAACACGCAGCCTCTGTCTACTATGCAAGAGTGGAAGGCTACCGGAGAGTCCAGAAGATATGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656193.1 |
||
| CDS CCA 72 bp | TTCCTCAGCTGGAGGGGCTTTTCCCTACTCAGTGTCTaGACCATTGCCAAGAAGATCTGTCCAGCTGTAAGC | + |
|
Preference number: 6 (lower is better) Translates to: FLSWRGFSLLSV*TIAKKICPAVS Trigger: GCTTACAGCTGGACAGATCTTCTTGGCAATGGTCCAGACACTGAGTAGGGAAAAGCCCCTCCAGCTGAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000452840.5 |
||
| CDS CCA 72 bp | CTCCTATTATCTGCTGCACAGCTCAGCTCAGAGATTTaGACCAGCACACTACATCCTGGGAGACGCTGTACC | + |
|
Preference number: 6 (lower is better) Translates to: LLLSAAQLSSEI*TSTLHPGRRCT Trigger: GGTACAGCGTCTCCCAGGATGTAGTGTGCTGGTCCAAATCTCTGAGCTGAGCTGTGCAGCAGATAATAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669630.1 |
||
| CDS CAA 90 bp | CTTTTCTTCCCGCCGAACTCTAGCACCCAAGTTCGCTGGCGGATTTaGGACTCTGCCAAAGTGCTGAGTTCGTCGTTTACTTTGAAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LFFPPNSSTQVRWRI*DSAKVLSSSFTLKA Trigger: GGCTTTCAAAGTAAACGACGAACTCAGCACTTTGGCAGAGTCCAAAATCCGCCAGCGAACTTGGGTGCTAGAGTTCGGCGGGAAGAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000422723.5 ENST00000656381.1 |
||
| CDS CAA 90 bp | GCTCCATCATTGTCACTCTGGGAAGAGAGCACAGTCCTGCAGGTCTaGCAGTTACACAAAGAGGGTCCTCTAGAATGTAGCTGGTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: APSLSLWEESTVLQV*QLHKEGPLECSWFR Trigger: CCTGAACCAGCTACATTCTAGAGGACCCTCTTTGTGTAACTGCAAGACCTGCAGGACTGTGCTCTCTTCCCAGAGTGACAATGATGGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657130.1 |
||
| CDS TCA 72 bp | TTCTCTCCCTATGTGGTACCCTCCGCACTGGTAAGGTaGCTGCCTTCCTCCTGCCAGCCTAGTTATTTATTG | + |
|
Preference number: 6 (lower is better) Translates to: FSPYVVPSALVR*LPSSCQPSYLL Trigger: CAATAAATAACTAGGCTGGCAGGAGGAAGGCAGTCACCTTACCAGTGCGGAGGGTACCACATAGGGAGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000655072.1 |
||
| CDS TCA 72 bp | ACACAAACTGAGGTGTCTTTAGGCAGTCCGTTCAGATaGGTAACTCAGATCCTCTGCACAAGCCCCTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: TQTEVSLGSPFR*VTQILCTSPSQ Trigger: CTGGGAGGGGCTTGTGCAGAGGATCTGAGTTACTCATCTGAACGGACTGCCTAAAGACACCTCAGTTTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656381.1 ENST00000665478.1 |
||
| CDS GCA 72 bp | TTCTGCTCAGTGCAGAGTGCCAGTCGACCTCTCCTGTaGAGTGAACACGTGACGAAGTGTGTAGAACAAATC | + |
|
Preference number: 6 (lower is better) Translates to: FCSVQSASRPLL*SEHVTKCVEQI Trigger: GATTTGTTCTACACACTTCGTCACGTGTTCACTGCACAGGAGAGGTCGACTGGCACTCTGCACTGAGCAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000656135.1 ENST00000657130.1 ENST00000665478.1 |
||
| CDS CCA 72 bp | CACTGTGATGAATTTCCAAGGCAGCAGCTGAAACCCTaGGTCACTCTTGTTCCTTGCAGTCAGAGAGGCATG | + |
|
Preference number: 6 (lower is better) Translates to: HCDEFPRQQLKP*VTLVPCSQRGM Trigger: CATGCCTCTCTGACTGCAAGGAACAAGAGTGACCCAGGGTTTCAGCTGCTGCCTTGGAAATTCATCACAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000422793.2 ENST00000429664.6 ENST00000656381.1 ENST00000657130.1 ENST00000664741.1 ENST00000665429.1 ENST00000665478.1 ENST00000665525.1 ENST00000668410.1 |
||
| CDS CCA 72 bp | GCACACACAGGCTTTGTGTTTTGGATAATCCTCCACTaGGTGGCTCAGGGACTCAGGGACTTAGGATACTTC | + |
|
Preference number: 6 (lower is better) Translates to: AHTGFVFWIILH*VAQGLRDLGYF Trigger: GAAGTATCCTAAGTCCCTGAGTCCCTGAGCCACCCAGTGGAGGATTATCCAAAACACAAAGCCTGTGTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665525.1 |
||
| CDS CAA 72 bp | AACATATCTTCTGGACTCTCCGGTAGCCTTCCACTCTaGCATAGTAGACAGAGGCTGCGTGTTCCTCTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: NISSGLSGSLPL*HSRQRLRVPLH Trigger: GTGCAGAGGAACACGCAGCCTCTGTCTACTATGCAAGAGTGGAAGGCTACCGGAGAGTCCAGAAGATATGTT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656193.1 |
||
| CDS CAA 72 bp | TCTCCTATTATCTGCTGCACAGCTCAGCTCAGAGATTaGGACCAGCACACTACATCCTGGGAGACGCTGTAC | + |
|
Preference number: 6 (lower is better) Translates to: SPIICCTAQLRD*DQHTTSWETLY Trigger: GTACAGCGTCTCCCAGGATGTAGTGTGCTGGTCCAAATCTCTGAGCTGAGCTGTGCAGCAGATAATAGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000669630.1 |
||
| CDS TCA 72 bp | TGCTTCTTGCCCTATAGCCAGAATCTTCTCATCCAGTaGCAAGGGCAGGGCCAGATAATCCATGGTACACAG | + |
|
Preference number: 6 (lower is better) Translates to: CFLPYSQNLLIQ*QGQGQIIHGTQ Trigger: CTGTGTACCATGGATTATCTGGCCCTGCCCTTGTCACTGGATGAGAAGATTCTGGCTATAGGGCAAGAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452840.5 |
||
| CDS GCA 72 bp | CTGGAGGGGCTTTTCCCTACTCAGTGTCTGGACCATTaGCAAGAAGATCTGTCCAGCTGTAAGCCTGATTTT | + |
|
Preference number: 6 (lower is better) Translates to: LEGLFPTQCLDH*QEDLSSCKPDF Trigger: AAAATCAGGCTTACAGCTGGACAGATCTTCTTGGCAATGGTCCAGACACTGAGTAGGGAAAAGCCCCTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000452840.5 |
||
| CDS GCA 72 bp | CCACCAGGGGGCTGCACTCTTACTTGCTTCATATCCTaGCATTCACATTGCAGCTACTCTTTGGTGAAGATC | + |
|
Preference number: 6 (lower is better) Translates to: PPGGCTLTCFIS*HSHCSYSLVKI Trigger: GATCTTCACCAAAGAGTAGCTGCAATGTGAATGGCAGGATATGAAGCAAGTAAGAGTGCAGCCCCCTGGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000656381.1 |
||
| CDS CCA 72 bp | TCAACCCCTGCTCAGGACAATTCAACCAACGGACTGTaGAAAGAAAGTAATGTATGCCCAGCCACAGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: STPAQDNSTNGL*KESNVCPATAE Trigger: CTCTGCTGTGGCTGGGCATACATTACTTTCTTTCCACAGTCCGTTGGTTGAATTGTCCTGAGCAGGGGTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000452840.5 |
||
| CDS CAA 72 bp | TTGTCACTCTGGGAAGAGAGCACAGTCCTGCAGGTCTaGCAGTTACACAAAGAGGGTCCTCTAGAATGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: LSLWEESTVLQV*QLHKEGPLECS Trigger: GCTACATTCTAGAGGACCCTCTTTGTGTAACTGCAAGACCTGCAGGACTGTGCTCTCTTCCCAGAGTGACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657130.1 |
||
| CDS TCA 72 bp | GAGTTCGTCGTTTACTTTGAAAGCCTGAAATATAACTaGTGTCCAACTGCAGGAAGGCGCACGGAATCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: EFVVYFESLKYN*CPTAGRRTESP Trigger: CGGCGATTCCGTGCGCCTTCCTGCAGTTGGACATCAGTTATATTTCAGGCTTTCAAAGTAAACGACGAACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000422723.5 |
||
| CDS TCA 72 bp | AGGGATTGTGCTCTGTACAGATGCATTCAGTCTTCTTaGAGCCTAAACTCTGCTTGGTGGGGCCAGGAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: RDCALYRCIQSS*SLNSAWWGQER Trigger: TCTTTCCTGGCCCCACCAAGCAGAGTTTAGGCTTCAAGAAGACTGAATGCATCTGTACAGAGCACAATCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427421.5 |
||
| CDS TCA 72 bp | CTCAGTGCAGAGTGCCAGTCGACCTCTCCTGTGCAGTaGACACGTGACGAAGTGTGTAGAACAAATCAAAAA | + |
|
Preference number: 6 (lower is better) Translates to: LSAECQSTSPVQ*TRDEVCRTNQK Trigger: TTTTTGATTTGTTCTACACACTTCGTCACGTGTTCACTGCACAGGAGAGGTCGACTGGCACTCTGCACTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000656135.1 ENST00000657130.1 ENST00000665478.1 |
||
| CDS GCA 72 bp | GGTAACATTCTGGATCTCGGTCCAAGCACTGCTTCTTaGCCTATAGCCAGAATCTTCTCATCCAGTGACAAG | + |
|
Preference number: 6 (lower is better) Translates to: GNILDLGPSTAS*PIARIFSSSDK Trigger: CTTGTCACTGGATGAGAAGATTCTGGCTATAGGGCAAGAAGCAGTGCTTGGACCGAGATCCAGAATGTTACC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452840.5 |
||
| CDS CCA 72 bp | AGTCTTGCCTTCAAGGGTGTTACATGTAAACAAGTCTaGAAGGGCTTCATGGGGAAAGGTGGAACTCTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SLAFKGVTCKQV*KGFMGKGGTLP Trigger: AGGCAGAGTTCCACCTTTCCCCATGAAGCCCTTCCAGACTTGTTTACATGTAACACCCTTGAAGGCAAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000452840.5 |
||
| CDS CCA 72 bp | CGCAGTAATGCAAGACCACAGTATGTAAATGATCCCTaGTCCCTTAAGTGTCACATCCTAGCCTGGCAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: RSNARPQYVNDP*SLKCHILAWQS Trigger: TGACTGCCAGGCTAGGATGTGACACTTAAGGGACCAGGGATCATTTACATACTGTGGTCTTGCATTACTGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000455219.8 ENST00000657378.1 ENST00000662396.1 ENST00000663407.1 ENST00000669630.1 |
||
| CDS CCA 72 bp | ACTTCTGGTACAAAATGGCATCTGGCTACCATCCCCTaGGCACTGCCTCTCCCAGTTGTCAATATCATACAT | + |
|
Preference number: 6 (lower is better) Translates to: TSGTKWHLATIP*ALPLPVVNIIH Trigger: ATGTATGATATTGACAACTGGGAGAGGCAGTGCCCAGGGGATGGTAGCCAGATGCCATTTTGTACCAGAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000455219.8 ENST00000657378.1 ENST00000662396.1 ENST00000663407.1 ENST00000669630.1 |
||
| CDS CAA 72 bp | GCTCTGTGTGAGATAATCATGCTTCCAGCCAACACTTaGTGCAGGAGAAAGTCCTCGAACTGGCTCCAAAAC | + |
|
Preference number: 6 (lower is better) Translates to: ALCEIIMLPANT*CRRKSSNWLQN Trigger: GTTTTGGAGCCAGTTCGAGGACTTTCTCCTGCACAAAGTGTTGGCTGGAAGCATGATTATCTCACACAGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000427421.5 ENST00000449448.6 ENST00000452840.5 ENST00000650056.1 |
||
| CDS GCA 72 bp | AGAAAGAGGGAAGGGTGGAGGAACCCTAAATTGCCATaGATTTCTAAGGAAAGTCTGTCAAGGCCATCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: RKREGWRNPKLP*ISKESLSRPSS Trigger: GCTTGATGGCCTTGACAGACTTTCCTTAGAAATGCATGGCAATTTAGGGTTCCTCCACCCTTCCCTCTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000422793.2 ENST00000429664.6 ENST00000656381.1 ENST00000657130.1 ENST00000664741.1 ENST00000665429.1 ENST00000665478.1 ENST00000665525.1 ENST00000668410.1 |
||
| CDS CCA 72 bp | GGTGTACACATCACTAATGCCATCCTTTCTTATCACTaGGTGCTGGAAACTCAGGTAAACCAGGGAGGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: GVHITNAILSYH*VLETQVNQGGE Trigger: TTCTCCTCCCTGGTTTACCTGAGTTTCCAGCACCCAGTGATAAGAAAGGATGGCATTAGTGATGTGTACACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000427421.5 ENST00000452840.5 ENST00000650056.1 |
||
| CDS CCA 72 bp | CCAAAGGTGCTGTGGTTTAGTGGTGGAGTTTTGTGGTaGGCTTTGGAGTACAACCGAACATTCTTCAAATGC | + |
|
Preference number: 6 (lower is better) Translates to: PKVLWFSGGVLW*ALEYNRTFFKC Trigger: GCATTTGAAGAATGTTCGGTTGTACTCCAAAGCCCACCACAAAACTCCACCACTAAACCACAGCACCTTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656381.1 ENST00000665478.1 |
||
| CDS CCA 72 bp | GCTCCAAAGGTGCTGTGGTTTAGTGGTGGAGTTTTGTaGTGGGCTTTGGAGTACAACCGAACATTCTTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: APKVLWFSGGVL*WALEYNRTFFK Trigger: TTTGAAGAATGTTCGGTTGTACTCCAAAGCCCACCACAAAACTCCACCACTAAACCACAGCACCTTTGGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656381.1 ENST00000665478.1 |
||
| CDS CAA 72 bp | ACCATGTGTTATTGCTTCATGCTTCCAGCCAACACTTaGTGCAGGAGAAAGTCCTCGAACTGGCTCCAAAAC | + |
|
Preference number: 6 (lower is better) Translates to: TMCYCFMLPANT*CRRKSSNWLQN Trigger: GTTTTGGAGCCAGTTCGAGGACTTTCTCCTGCACAAAGTGTTGGCTGGAAGCATGAAGCAATAACACATGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000422793.2 ENST00000429664.6 ENST00000656381.1 ENST00000657130.1 ENST00000664741.1 ENST00000665429.1 ENST00000665478.1 ENST00000665525.1 ENST00000668410.1 |
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| CDS CAA 72 bp | ATTGCTCCAAAGGTGCTGTGGTTTAGTGGTGGAGTTTaGTGGTGGGCTTTGGAGTACAACCGAACATTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: IAPKVLWFSGGV*WWALEYNRTFF Trigger: GAAGAATGTTCGGTTGTACTCCAAAGCCCACCACAAAACTCCACCACTAAACCACAGCACCTTTGGAGCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656381.1 ENST00000665478.1 |
||
| CDS CAA 90 bp | AAACCCTGGGTCACTCTTGTTCCTTGCAGTCAGAGAGGCATGTTCTaGTGGTCACCACCAGTATTATTCAATGCAGATTCTTTGGCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: KPWVTLVPCSQRGMF*WSPPVLFNADSLAN Trigger: GTTTGCCAAAGAATCTGCATTGAATAATACTGGTGGTGACCACAAGAACATGCCTCTCTGACTGCAAGGAACAAGAGTGACCCAGGGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000422793.2 ENST00000429664.6 ENST00000656381.1 ENST00000657130.1 ENST00000664741.1 ENST00000665429.1 ENST00000665478.1 ENST00000665525.1 ENST00000668410.1 ENST00000671194.1 |
||
| CDS CAA 90 bp | TCTCTTCAGTGTACGCCTTTCTTGATAAGCCCCATGGTTTCCTTCTaGGAGAAGGGATTGTGCTCTGTACAGATGCATTCAGTCTTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SLQCTPFLISPMVSF*EKGLCSVQMHSVFL Trigger: CAAGAAGACTGAATGCATCTGTACAGAGCACAATCCCTTCTCCAAGAAGGAAACCATGGGGCTTATCAAGAAAGGCGTACACTGAAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427421.5 |
||
| CDS CAA 90 bp | GGTTGTTGCTATTTGATGGTAATCCTGGACCTCCTGCACTTTATCTaGGTCTACCAGGGACAGATTTGGCAAGAGGAATATAGGGTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: GCCYLMVILDLLHFI*VYQGQIWQEEYRVS Trigger: ACTGACCCTATATTCCTCTTGCCAAATCTGTCCCTGGTAGACCAAGATAAAGTGCAGGAGGTCCAGGATTACCATCAAATAGCAACAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656193.1 |
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| CDS TCA 72 bp | GCCAAAGTGCTGAGTTCGTCGTTTACTTTGAAAGCCTaGAATATAACTGATGTCCAACTGCAGGAAGGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: AKVLSSSFTLKA*NITDVQLQEGA Trigger: TGCGCCTTCCTGCAGTTGGACATCAGTTATATTTCAGGCTTTCAAAGTAAACGACGAACTCAGCACTTTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000422723.5 |
||
| CDS TCA 72 bp | TGGAAGGGCTTCATGGGGAAAGGTGGAACTCTGCCTTaGACTTATCGGCTGATCTTTGATAATCACTATGGT | + |
|
Preference number: 6 (lower is better) Translates to: WKGFMGKGGTLP*TYRLIFDNHYG Trigger: ACCATAGTGATTATCAAAGATCAGCCGATAAGTTCAAGGCAGAGTTCCACCTTTCCCCATGAAGCCCTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000452840.5 |
||
| CDS TCA 72 bp | CAGTGCACACTAAGGCCTCATTCATCCAAGCTAACCTaGATGGGGAGAGTCTATGTGGCTGCACATTTAAAT | + |
|
Preference number: 6 (lower is better) Translates to: QCTLRPHSSKLT*MGRVYVAAHLN Trigger: ATTTAAATGTGCAGCCACATAGACTCTCCCCATTCAGGTTAGCTTGGATGAATGAGGCCTTAGTGTGCACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656135.1 |
||
| CDS GCA 72 bp | TGTATTTCCTCCAAAGCTGGTGACCAATTAGTTGCTTaGCATGGACTGTCATTTCACTGCTCTGAGTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: CISSKAGDQLVA*HGLSFHCSECC Trigger: ACAGCACTCAGAGCAGTGAAATGACAGTCCATGGCAAGCAACTAATTGGTCACCAGCTTTGGAGGAAATACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656135.1 |
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| CDS CCA 72 bp | CCAGCCAACACTTTGTGCAGGAGAAAGTCCTCGAACTaGCTCCAAAACTTTTCAATTCCTGACAAATGCACT | + |
|
Preference number: 6 (lower is better) Translates to: PANTLCRRKSSN*LQNFSIPDKCT Trigger: AGTGCATTTGTCAGGAATTGAAAAGTTTTGGAGCCAGTTCGAGGACTTTCTCCTGCACAAAGTGTTGGCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 15 transcripts: ENST00000422793.2 ENST00000427421.5 ENST00000429664.6 ENST00000449448.6 ENST00000452840.5 ENST00000650056.1 ENST00000656135.1 ENST00000656381.1 ENST00000657130.1 ENST00000664741.1 ENST00000665429.1 ENST00000665478.1 ENST00000665525.1 ENST00000668410.1 ENST00000671194.1 |
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| CDS CCA 72 bp | ATAATCTTTTCACCATCTGGTTCAGGGAGAGCACAGTaGAATGATGGAAATGGCAGGGCGAGGGTAACATAT | + |
|
Preference number: 6 (lower is better) Translates to: IIFSPSGSGRAQ*NDGNGRARVTY Trigger: ATATGTTACCCTCGCCCTGCCATTTCCATCATTCCACTGTGCTCTCCCTGAACCAGATGGTGAAAAGATTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656135.1 ENST00000665478.1 |
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| CDS CAA 72 bp | TGTACGCCTTTCTTGATAAGCCCCATGGTTTCCTTCTaGGAGAAGGGATTGTGCTCTGTACAGATGCATTCA | + |
|
Preference number: 6 (lower is better) Translates to: CTPFLISPMVSF*EKGLCSVQMHS Trigger: TGAATGCATCTGTACAGAGCACAATCCCTTCTCCAAGAAGGAAACCATGGGGCTTATCAAGAAAGGCGTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427421.5 |
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| CDS CAA 90 bp | TTCTTCTTCCCTCATCCTCTCTCTCTCCAGTTTAGACTCATAAACTaGTCACTTTCCCTCCATCCCTGCTGCTGCTGTTTGACTTCATTT | + |
|
Preference number: 6 (lower is better) Translates to: FFFPHPLSLQFRLIN*SLSLHPCCCCLTSF Trigger: AAATGAAGTCAAACAGCAGCAGCAGGGATGGAGGGAAAGTGACAAGTTTATGAGTCTAAACTGGAGAGAGAGAGGATGAGGGAAGAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000657378.1 ENST00000662396.1 ENST00000663407.1 |
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| CDS GCA 72 bp | GGCTCAGGGACTCAGGGACTTAGGATACTTCCATTTTaGAATTCTCCCTCTAAGGATCTTCACTTCTTAAGT | + |
|
Preference number: 6 (lower is better) Translates to: GSGTQGLRILPF*NSPSKDLHFLS Trigger: ACTTAAGAAGTGAAGATCCTTAGAGGGAGAATTGCAAAATGGAAGTATCCTAAGTCCCTGAGTCCCTGAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665525.1 |
||
| CDS GCA 72 bp | AGGATTCCCCACATTGCTCTTACTTGCTTCATATCCTaGCATTCACATTGCAGCTACTCTTTGGTGAAGATC | + |
|
Preference number: 6 (lower is better) Translates to: RIPHIALTCFIS*HSHCSYSLVKI Trigger: GATCTTCACCAAAGAGTAGCTGCAATGTGAATGGCAGGATATGAAGCAAGTAAGAGCAATGTGGGGAATCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657130.1 ENST00000665478.1 |
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| CDS CCA 72 bp | AAACAGTTCAAGAGATGGCCAAAACTTTACACCAAGTaGGGACCCAAGAACCTTTCAGATGAAGAGGTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: KQFKRWPKLYTK*GPKNLSDEEVS Trigger: AGAGACCTCTTCATCTGAAAGGTTCTTGGGTCCCCACTTGGTGTAAAGTTTTGGCCATCTCTTGAACTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000655072.1 |
||
| CDS CCA 72 bp | AAAGGCTTTATACTGAGGAGGAAACAGTTCAAGAGATaGCCAAAACTTTACACCAAGTGGGGACCCAAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: KGFILRRKQFKR*PKLYTKWGPKN Trigger: GTTCTTGGGTCCCCACTTGGTGTAAAGTTTTGGCCATCTCTTGAACTGTTTCCTCCTCAGTATAAAGCCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000655072.1 |
||
| CDS CCA 72 bp | TGCTGTGGTTTAGTGGTGGAGTTTTGTGGTGGGCTTTaGAGTACAACCGAACATTCTTCAAATGCTAACTCT | + |
|
Preference number: 6 (lower is better) Translates to: CCGLVVEFCGGL*STTEHSSNANS Trigger: AGAGTTAGCATTTGAAGAATGTTCGGTTGTACTCCAAAGCCCACCACAAAACTCCACCACTAAACCACAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656381.1 ENST00000665478.1 |
||
| CDS CAA 72 bp | GTCACTCTTGTTCCTTGCAGTCAGAGAGGCATGTTCTaGTGGTCACCACCAGTATTATTCAATGCAGATTCT | + |
|
Preference number: 6 (lower is better) Translates to: VTLVPCSQRGMF*WSPPVLFNADS Trigger: AGAATCTGCATTGAATAATACTGGTGGTGACCACAAGAACATGCCTCTCTGACTGCAAGGAACAAGAGTGAC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 10 transcripts: ENST00000422793.2 ENST00000429664.6 ENST00000656381.1 ENST00000657130.1 ENST00000664741.1 ENST00000665429.1 ENST00000665478.1 ENST00000665525.1 ENST00000668410.1 ENST00000671194.1 |
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| CDS CAA 72 bp | CTCTCTTCTCCTCTTAGTAGATGGGCATGTTCCCTCTaGCTTTTCGTAGCTCATCAATGTATCAACCTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LSSPLSRWACSL*LFVAHQCINLS Trigger: GGAAAGGTTGATACATTGATGAGCTACGAAAAGCAAGAGGGAACATGCCCATCTACTAAGAGGAGAAGAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656135.1 ENST00000671194.1 |
||
| CDS CAA 90 bp | CAGTCTCAGAAACTCACATATACAAGGCATGTTGGTTGTTGCTATTaGATGGTAATCCTGGACCTCCTGCACTTTATCTTGGTCTACCAG | + |
|
Preference number: 6 (lower is better) Translates to: QSQKLTYTRHVGCCY*MVILDLLHFILVYQ Trigger: CTGGTAGACCAAGATAAAGTGCAGGAGGTCCAGGATTACCATCAAATAGCAACAACCAACATGCCTTGTATATGTGAGTTTCTGAGACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656193.1 |
||
| CDS TCA 72 bp | CAGAGGTCTGGAATAATGTATTTCCTCCAAAGCTGGTaGCCAATTAGTTGCTTGCCATGGACTGTCATTTCA | + |
|
Preference number: 6 (lower is better) Translates to: QRSGIMYFLQSW*PISCLPWTVIS Trigger: TGAAATGACAGTCCATGGCAAGCAACTAATTGGTCACCAGCTTTGGAGGAAATACATTATTCCAGACCTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656135.1 |
||
| CDS TCA 72 bp | AAAAGGGACAGCTCTCATAAAAATGTGGTCACATGCTaGATTCACTTGAGCCTGTATTCTCAGGCAGAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: KRDSSHKNVVTC*IHLSLYSQAEA Trigger: AGCTTCTGCCTGAGAATACAGGCTCAAGTGAATTCAGCATGTGACCACATTTTTATGAGAGCTGTCCCTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000656135.1 |
||
| CDS GCA 72 bp | TTTGGCAGTGATAGCTCTCTTACTTGCTTCATATCCTaGCATTCACATTGCAGCTACTCTTTGGTGAAGATC | + |
|
Preference number: 6 (lower is better) Translates to: FGSDSSLTCFIS*HSHCSYSLVKI Trigger: GATCTTCACCAAAGAGTAGCTGCAATGTGAATGGCAGGATATGAAGCAAGTAAGAGAGCTATCACTGCCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000427421.5 ENST00000656135.1 |
||
| CDS GCA 72 bp | GATTCTAGAGGCTCATTGTCTTGCAAAATATTCAGGTaGCTCACAACAATCGGGACTCCAATTTGTTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: DSRGSLSCKIFR*LTTIGTPICSV Trigger: CACAGAACAAATTGGAGTCCCGATTGTTGTGAGGCACCTGAATATTTTGCAAGACAATGAGCCTCTAGAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656381.1 |
||
| CDS CCA 72 bp | TGTGTATGTTTTAGGCTCTCTTCTCCTCTTAGTAGATaGGCATGTTCCCTCTTGCTTTTCGTAGCTCATCAA | + |
|
Preference number: 6 (lower is better) Translates to: CVCFRLSSPLSR*ACSLLLFVAHQ Trigger: TTGATGAGCTACGAAAAGCAAGAGGGAACATGCCCATCTACTAAGAGGAGAAGAGAGCCTAAAACATACACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000656135.1 ENST00000671194.1 |
||
| CDS CAA 72 bp | AGTAGCCTTTCCAATTTCCCAAGGACAAACGTAGTCTaGACTCTGGTGTACTATAGACCTTTCAACCCAACT | + |
|
Preference number: 6 (lower is better) Translates to: SSLSNFPRTNVV*TLVYYRPFNPT Trigger: AGTTGGGTTGAAAGGTCTATAGTACACCAGAGTCAAGACTACGTTTGTCCTTGGGAAATTGGAAAGGCTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000657378.1 ENST00000662396.1 ENST00000663407.1 |
||
| CDS CAA 72 bp | TATTTGATGGTAATCCTGGACCTCCTGCACTTTATCTaGGTCTACCAGGGACAGATTTGGCAAGAGGAATAT | + |
|
Preference number: 6 (lower is better) Translates to: YLMVILDLLHFI*VYQGQIWQEEY Trigger: ATATTCCTCTTGCCAAATCTGTCCCTGGTAGACCAAGATAAAGTGCAGGAGGTCCAGGATTACCATCAAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656193.1 |
||
| CDS CAA 72 bp | AAAGTGACTTTCAAGCTGGAAAACAAAACAGGCTCCTaGCTAGTCAGTCAAGTTGTTTCACAGAAGGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: KVTFKLENKTGS*LVSQVVSQKGS Trigger: AGAGCCCTTCTGTGAAACAACTTGACTGACTAGCAAGGAGCCTGTTTTGTTTTCCAGCTTGAAAGTCACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000656135.1 ENST00000657130.1 ENST00000665478.1 |
||
| CDS CAA 90 bp | GGCATGTTCTTGTGGTCACCACCAGTATTATTCAATGCAGATTCTTaGGCAAACCATGTGTTATTGCTTCATGCTTCCAGCCAACACTTT | + |
|
Preference number: 6 (lower is better) Translates to: GMFLWSPPVLFNADS*ANHVLLLHASSQHF Trigger: AAAGTGTTGGCTGGAAGCATGAAGCAATAACACATGGTTTGCCAAAGAATCTGCATTGAATAATACTGGTGGTGACCACAAGAACATGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000422793.2 ENST00000429664.6 ENST00000656381.1 ENST00000657130.1 ENST00000664741.1 ENST00000665429.1 ENST00000665478.1 ENST00000665525.1 ENST00000668410.1 |
||
| CDS CAA 90 bp | GACATAGCAGTCTCAGAAACTCACATATACAAGGCATGTTGGTTGTaGCTATTTGATGGTAATCCTGGACCTCCTGCACTTTATCTTGGT | + |
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Preference number: 6 (lower is better) Translates to: DIAVSETHIYKACWL*LFDGNPGPPALYLG Trigger: ACCAAGATAAAGTGCAGGAGGTCCAGGATTACCATCAAATAGCAACAACCAACATGCCTTGTATATGTGAGTTTCTGAGACTGCTATGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656193.1 |
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| CDS TCA 72 bp | AGGAATATAGAAGCTAGAAGCAAGGCTTCTACTCCTTaGACAGTCTCTCATTCCCAGCATCTTAGTTTAGCT | + |
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Preference number: 6 (lower is better) Translates to: RNIEARSKASTP*TVSHSQHLSLA Trigger: AGCTAAACTAAGATGCTGGGAATGAGAGACTGTTCAAGGAGTAGAAGCCTTGCTTCTAGCTTCTATATTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656381.1 ENST00000665478.1 |
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| CDS GCA 72 bp | TCTCAGAAACTCACATATACAAGGCATGTTGGTTGTTaGTATTTGATGGTAATCCTGGACCTCCTGCACTTT | + |
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Preference number: 6 (lower is better) Translates to: SQKLTYTRHVGC*YLMVILDLLHF Trigger: AAAGTGCAGGAGGTCCAGGATTACCATCAAATAGCAACAACCAACATGCCTTGTATATGTGAGTTTCTGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656193.1 |
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| CDS GCA 72 bp | GCATATGATATGTCCAGTTTGGGACAGAGGTGCACATaGTTAAGTCAATCTGATTATGCATTAGGTCCTTAC | + |
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Preference number: 6 (lower is better) Translates to: AYDMSSLGQRCT*LSQSDYALGPY Trigger: GTAAGGACCTAATGCATAATCAGATTGACTTAAGCATGTGCACCTCTGTCCCAAACTGGACATATCATATGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656135.1 |
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| CDS CAA 90 bp | ACTGACATAGCAGTCTCAGAAACTCACATATACAAGGCATGTTGGTaGTTGCTATTTGATGGTAATCCTGGACCTCCTGCACTTTATCTT | + |
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Preference number: 6 (lower is better) Translates to: TDIAVSETHIYKACW*LLFDGNPGPPALYL Trigger: AAGATAAAGTGCAGGAGGTCCAGGATTACCATCAAATAGCAACAACCAACATGCCTTGTATATGTGAGTTTCTGAGACTGCTATGTCAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656193.1 |
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| CDS CAA 90 bp | GGCATGTTCTTGTGGTCACCACCAGTATTATTCAATGCAGATTCTTaGGCAAACCATGTGTTATTGCTTCTCACATTTGGCTTTCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: GMFLWSPPVLFNADS*ANHVLLLLTFGFLF Trigger: GAAGAGAAAGCCAAATGTGAGAAGCAATAACACATGGTTTGCCAAAGAATCTGCATTGAATAATACTGGTGGTGACCACAAGAACATGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671194.1 |
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| CDS TCA 72 bp | CTTCAGCTTAATTGCCTACAACCTATCATGACTTCCTaGTCTCATGATGCACTCTCATGTCACTATGCTTTT | + |
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Preference number: 6 (lower is better) Translates to: LQLNCLQPIMTS*SHDALSCHYAF Trigger: AAAAGCATAGTGACATGAGAGTGCATCATGAGATCAGGAAGTCATGATAGGTTGTAGGCAATTAAGCTGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000657378.1 ENST00000662396.1 ENST00000663407.1 |
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| CDS TCA 72 bp | GCTCTCATAAAAATGTGGTCACATGCTGAATTCACTTaGGCCTGTATTCTCAGGCAGAAGCTATGTGAAATA | + |
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Preference number: 6 (lower is better) Translates to: ALIKMWSHAEFT*ACILRQKLCEI Trigger: TATTTCACATAGCTTCTGCCTGAGAATACAGGCTCAAGTGAATTCAGCATGTGACCACATTTTTATGAGAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000656135.1 |
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| CDS TCA 72 bp | GATCACATAGCTGACATTGCCAATAAGTATAAGATATaGTTTCAGGCTCCATCATTGTCACTCTGGGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: DHIADIANKYKI*FQAPSLSLWEE Trigger: CTCTTCCCAGAGTGACAATGATGGAGCCTGAAATCATATCTTATACTTATTGGCAATGTCAGCTATGTGATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657130.1 |
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| CDS GCA 72 bp | AGGCATGTTCTTGTGGTCACCACCAGTATTATTCAATaGAGATTCTTTGGCAAACCATGTGTTATTGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: RHVLVVTTSIIQ*RFFGKPCVIAS Trigger: TGAAGCAATAACACATGGTTTGCCAAAGAATCTGCATTGAATAATACTGGTGGTGACCACAAGAACATGCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000422793.2 ENST00000429664.6 ENST00000656381.1 ENST00000657130.1 ENST00000664741.1 ENST00000665429.1 ENST00000665478.1 ENST00000665525.1 ENST00000668410.1 |
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| CDS GCA 72 bp | AGGCATGTTCTTGTGGTCACCACCAGTATTATTCAATaGAGATTCTTTGGCAAACCATGTGTTATTGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: RHVLVVTTSIIQ*RFFGKPCVIAS Trigger: AGAAGCAATAACACATGGTTTGCCAAAGAATCTGCATTGAATAATACTGGTGGTGACCACAAGAACATGCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671194.1 |
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| CDS CCA 72 bp | AAGCTAAGTAAAGGCAAACTGCTCTTCACAATCAACTaGCCGCAAAGGATGCCACTATATTATACAATACCA | + |
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Preference number: 6 (lower is better) Translates to: KLSKGKLLFTIN*PQRMPLYYTIP Trigger: TGGTATTGTATAATATAGTGGCATCCTTTGCGGCCAGTTGATTGTGAAGAGCAGTTTGCCTTTACTTAGCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452840.5 |
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| CDS CAA 72 bp | AAACTCACATATACAAGGCATGTTGGTTGTTGCTATTaGATGGTAATCCTGGACCTCCTGCACTTTATCTTG | + |
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Preference number: 6 (lower is better) Translates to: KLTYTRHVGCCY*MVILDLLHFIL Trigger: CAAGATAAAGTGCAGGAGGTCCAGGATTACCATCAAATAGCAACAACCAACATGCCTTGTATATGTGAGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656193.1 |
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| CDS TCA 72 bp | GGTCTTGTACTTGTTAGAGAATCCGAGGAAAACCACTaGCCTTCTTCGTCTCTAAAATGTACATATATCCAT | + |
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Preference number: 6 (lower is better) Translates to: GLVLVRESEENH*PSSSLKCTYIH Trigger: ATGGATATATGTACATTTTAGAGACGAAGAAGGTCAGTGGTTTTCCTCGGATTCTCTAACAAGTACAAGACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000656135.1 |
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| CDS GCA 72 bp | ACCGAACATTCTTCAAATGCTAACTCTGCAATCTACTaGCATATACATTATTTTACCTCTCAGAGTGACTGC | + |
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Preference number: 6 (lower is better) Translates to: TEHSSNANSAIY*HIHYFTSQSDC Trigger: GCAGTCACTCTGAGAGGTAAAATAATGTATATGGCAGTAGATTGCAGAGTTAGCATTTGAAGAATGTTCGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000656381.1 ENST00000665478.1 |
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| CDS GCA 72 bp | TCACAAAGGACCTCAAATTTCAGCCAACATCATACATaGAGTCATAGAGAAACATTGGCAGGATTGAAAGAT | + |
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Preference number: 6 (lower is better) Translates to: SQRTSNFSQHHT*SHRETLAGLKD Trigger: ATCTTTCAATCCTGCCAATGTTTCTCTATGACTGCATGTATGATGTTGGCTGAAATTTGAGGTCCTTTGTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656193.1 |
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| CDS GCA 72 bp | GTTAGTTGGTGTATACATTTTATGAAATGGTCTCCTTaGATTCTGCAGTTCTTCCTGTTCTTTAAAAGCGGG | + |
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Preference number: 6 (lower is better) Translates to: VSWCIHFMKWSP*ILQFFLFFKSG Trigger: CCCGCTTTTAAAGAACAGGAAGAACTGCAGAATGCAAGGAGACCATTTCATAAAATGTATACACCAACTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000669630.1 |
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| CDS TCA 72 bp | CTTTTCGTAGCTCATCAATGTATCAACCTTTCCAAGTaGAACGATAAATTAGAGAGACAAACATGCTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: LFVAHQCINLSK*NDKLERQTCFQ Trigger: CTGGAAGCATGTTTGTCTCTCTAATTTATCGTTTCACTTGGAAAGGTTGATACATTGATGAGCTACGAAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000671194.1 |
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| CDS CAA 72 bp | TTCAGCCAACATCATACATGCAGTCATAGAGAAACATaGGCAGGATTGAAAGATGATATTCATTATGCCACT | + |
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Preference number: 6 (lower is better) Translates to: FSQHHTCSHRET*AGLKDDIHYAT Trigger: AGTGGCATAATGAATATCATCTTTCAATCCTGCCAATGTTTCTCTATGACTGCATGTATGATGTTGGCTGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000656193.1 |
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| CDS TCA 72 bp | GATCTCAAGGAAAATTGGTCTAAGAGTTTGTTGGAATaGGTAAATGAAAGTACTCCCAACAAAGGCATTCAT | + |
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Preference number: 6 (lower is better) Translates to: DLKENWSKSLLE*VNESTPNKGIH Trigger: ATGAATGCCTTTGTTGGGAGTACTTTCATTTACTCATTCCAACAAACTCTTAGACCAATTTTCCTTGAGATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000657378.1 ENST00000662396.1 ENST00000663407.1 ENST00000669630.1 |
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| CDS TCA 72 bp | TATTCAAAATTACATATTAAGTGTGTGCTTGACAACTaGCATAGCAGTCTCAGAAACTCACATATACAAGGC | + |
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Preference number: 6 (lower is better) Translates to: YSKLHIKCVLDN*HSSLRNSHIQG Trigger: GCCTTGTATATGTGAGTTTCTGAGACTGCTATGTCAGTTGTCAAGCACACACTTAATATGTAATTTTGAATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656193.1 |
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| CDS CAA 72 bp | ATTGGGCCCATTTCCAAAATATTCTATACATCTTCTTaGAGAGGCTCACAAAAACATCTACTTTATCCATTC | + |
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Preference number: 6 (lower is better) Translates to: IGPISKIFYTSS*RGSQKHLLYPF Trigger: GAATGGATAAAGTAGATGTTTTTGTGAGCCTCTCAAAGAAGATGTATAGAATATTTTGGAAATGGGCCCAAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000452840.5 |
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| CDS CAA 72 bp | GTACCTATTACTTTGACCATTGCATCTCACATATACTaGAACATAATTGGAAGACCAGAAGAACCAAACAAT | + |
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Preference number: 6 (lower is better) Translates to: VPITLTIASHIY*NIIGRPEEPNN Trigger: ATTGTTTGGTTCTTCTGGTCTTCCAATTATGTTCAAGTATATGTGAGATGCAATGGTCAAAGTAATAGGTAC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000657378.1 ENST00000662396.1 ENST00000663407.1 |
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