Pregenerated sensors for LINC01121 (Homo sapiens)
Ensembl gene IDs: ENSG00000205054Ensembl transcript IDs: ENST00000378479.5, ENST00000413669.2, ENST00000427020.6, ENST00000430650.2, ENST00000454673.1, ENST00000658738.1
Found 83 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CGCACACGCATTGCTGCCTCCTCTCGGGCTTGGTTAATGAGTCTGTaGGCCAAGCCAGGTCGCTCCGGGCAGTTCGCGCTTCCGCGCCTC | + |
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Preference number: 5 (lower is better) Translates to: RTRIAASSRAWLMSL*AKPGRSGQFALPRL Trigger: GAGGCGCGGAAGCGCGAACTGCCCGGAGCGACCTGGCTTGGCGCACAGACTCATTAACCAAGCCCGAGAGGAGGCAGCAATGCGTGTGCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000427020.6 ENST00000658738.1 |
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| CDS TCA 90 bp | CAGGTCGCTCCGGGCAGTTCGCGCTTCCGCGCCTCGGCACTCGGATaGCCGTGTCCTATTCGTCTCTCTCGTGAATGTCGCTCTTCCATG | + |
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Preference number: 5 (lower is better) Translates to: QVAPGSSRFRASALG*PCPIRLSRECRSSM Trigger: CATGGAAGAGCGACATTCACGAGAGAGACGAATAGGACACGGTCATCCGAGTGCCGAGGCGCGGAAGCGCGAACTGCCCGGAGCGACCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000427020.6 ENST00000658738.1 |
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| CDS CCA 90 bp | AACCGCTCCCTTTCCCGCACACGCATTGCTGCCTCCTCTCGGGCTTaGTTAATGAGTCTGTGCGCCAAGCCAGGTCGCTCCGGGCAGTTC | + |
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Preference number: 5 (lower is better) Translates to: NRSLSRTRIAASSRA*LMSLCAKPGRSGQF Trigger: GAACTGCCCGGAGCGACCTGGCTTGGCGCACAGACTCATTAACCAAGCCCGAGAGGAGGCAGCAATGCGTGTGCGGGAAAGGGAGCGGTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000427020.6 ENST00000658738.1 |
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| CDS TCA 90 bp | TCTCAGAAGAGATGGCCTGATGATGAAGGGCTCGTCCAGAGCCTCTaGGCTGCAGCAGCTGAGTCCAAGCATCCAGGTACAGCTGAGCTC | + |
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Preference number: 5 (lower is better) Translates to: SQKRWPDDEGLVQSL*AAAAESKHPGTAEL Trigger: GAGCTCAGCTGTACCTGGATGCTTGGACTCAGCTGCTGCAGCTCAGAGGCTCTGGACGAGCCCTTCATCATCAGGCCATCTCTTCTGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000427020.6 ENST00000430650.2 ENST00000658738.1 |
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| CDS GCA 90 bp | GTCTTTACCTTAACTGTTCTCTGGTCTATCGCACCTTCTTCCTGCTaGTTTGCAAGCCCACCTGCTCCACCCCTTCCTGCCCCTCCCATG | + |
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Preference number: 5 (lower is better) Translates to: VFTLTVLWSIAPSSC*FASPPAPPLPAPPM Trigger: CATGGGAGGGGCAGGAAGGGGTGGAGCAGGTGGGCTTGCAAAGCAGCAGGAAGAAGGTGCGATAGACCAGAGAACAGTTAAGGTAAAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454673.1 |
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| CDS CCA 90 bp | CTGAGTCCAAGCATCCAGGTACAGCTGAGCTCAAGGCATCGTTCATaGCCACAACAGGAAGGTGACAGGAACATGGTGTCAGGGCCTCAG | + |
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Preference number: 5 (lower is better) Translates to: LSPSIQVQLSSRHRS*PQQEGDRNMVSGPQ Trigger: CTGAGGCCCTGACACCATGTTCCTGTCACCTTCCTGTTGTGGCCATGAACGATGCCTTGAGCTCAGCTGTACCTGGATGCTTGGACTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000427020.6 ENST00000430650.2 ENST00000658738.1 |
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| CDS CCA 90 bp | CTGCCTGCACCCTCGCTCCCCCTTGTCTTTACCTTAACTGTTCTCTaGTCTATCGCACCTTCTTCCTGCTGCTTTGCAAGCCCACCTGCT | + |
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Preference number: 5 (lower is better) Translates to: LPAPSLPLVFTLTVL*SIAPSSCCFASPPA Trigger: AGCAGGTGGGCTTGCAAAGCAGCAGGAAGAAGGTGCGATAGACCAGAGAACAGTTAAGGTAAAGACAAGGGGGAGCGAGGGTGCAGGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000454673.1 |
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| CDS TCA 90 bp | CTGCTTCTGCTTCCAGACTGCCCAGAAAGGCTGGAGCAAATGTCATaGCTGTGCAGACGAGGATGTTGCAGAGCCGGGCTTCCATCTTCA | + |
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Preference number: 5 (lower is better) Translates to: LLLLPDCPERLEQMS*LCRRGCCRAGLPSS Trigger: TGAAGATGGAAGCCCGGCTCTGCAACATCCTCGTCTGCACAGTCATGACATTTGCTCCAGCCTTTCTGGGCAGTCTGGAAGCAGAAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454673.1 |
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| CDS GCA 90 bp | ACTCTCAGCATAGGATCTCATTGTTTCCTTCCCCGGCAGGCTGCCTaGACCCTCGCTCCCCCTTGTCTTTACCTTAACTGTTCTCTGGTC | + |
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Preference number: 5 (lower is better) Translates to: TLSIGSHCFLPRQAA*TLAPPCLYLNCSLV Trigger: GACCAGAGAACAGTTAAGGTAAAGACAAGGGGGAGCGAGGGTGCAGGCAGCCTGCCGGGGAAGGAAACAATGAGATCCTATGCTGAGAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000454673.1 |
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| CDS CCA 90 bp | ACAGGCTCAAGGCTGGAAGGCCGCCTCCTTTGCTGTGGCTTGAAGTaGTTTGCGCAGACCGAGTCCAGATATGTAATAGCTGTTCGCTAT | + |
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Preference number: 5 (lower is better) Translates to: TGSRLEGRLLCCGLK*FAQTESRYVIAVRY Trigger: ATAGCGAACAGCTATTACATATCTGGACTCGGTCTGCGCAAACCACTTCAAGCCACAGCAAAGGAGGCGGCCTTCCAGCCTTGAGCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378479.5 |
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| CDS CCA 90 bp | TGGGTTCTTTGCTTCTGCTTCTGCTTCCAGACTGCCCAGAAAGGCTaGAGCAAATGTCATGACTGTGCAGACGAGGATGTTGCAGAGCCG | + |
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Preference number: 5 (lower is better) Translates to: WVLCFCFCFQTAQKG*SKCHDCADEDVAEP Trigger: CGGCTCTGCAACATCCTCGTCTGCACAGTCATGACATTTGCTCCAGCCTTTCTGGGCAGTCTGGAAGCAGAAGCAGAAGCAAAGAACCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454673.1 |
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| CDS GCA 90 bp | ATTCATGAACCTTCTACAGGCTCAAGGCTGGAAGGCCGCCTCCTTTaGTGTGGCTTGAAGTGGTTTGCGCAGACCGAGTCCAGATATGTA | + |
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Preference number: 5 (lower is better) Translates to: IHEPSTGSRLEGRLL*CGLKWFAQTESRYV Trigger: TACATATCTGGACTCGGTCTGCGCAAACCACTTCAAGCCACAGCAAAGGAGGCGGCCTTCCAGCCTTGAGCCTGTAGAAGGTTCATGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378479.5 |
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| CDS GCA 90 bp | AGACGAGGATGTTGCAGAGCCGGGCTTCCATCTTCAGCTTCTCAATaGCCTATTATTCATTCCTGCCTGACTTTCTGTTCCGTGTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: RRGCCRAGLPSSASQ*PIIHSCLTFCSVSS Trigger: GGAGGACACGGAACAGAAAGTCAGGCAGGAATGAATAATAGGGCATTGAGAAGCTGAAGATGGAAGCCCGGCTCTGCAACATCCTCGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454673.1 |
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| CDS CCA 90 bp | TTTGTTCCTGGCTTTCCATTTTTCTGTAATTCCTTTGGAATCAGGTaGGGGGACGATTGGTTTCCTGAAGGCGGCCTCCCAGAGAGGGAG | + |
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Preference number: 5 (lower is better) Translates to: FVPGFPFFCNSFGIR*GDDWFPEGGLPERE Trigger: CTCCCTCTCTGGGAGGCCGCCTTCAGGAAACCAATCGTCCCCCCACCTGATTCCAAAGGAATTACAGAAAAATGGAAAGCCAGGAACAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000427020.6 ENST00000430650.2 ENST00000658738.1 |
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| CDS TCA 90 bp | TTAGCCATCACTGAGTGTTCAGTTCCACTCAAAACAGAGCTGAGTTaGCAGAACGTGCCATCAGAGCTGGAAGCTCAACATCCGGGACAC | + |
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Preference number: 5 (lower is better) Translates to: LAITECSVPLKTELS*QNVPSELEAQHPGH Trigger: GTGTCCCGGATGTTGAGCTTCCAGCTCTGATGGCACGTTCTGTCAACTCAGCTCTGTTTTGAGTGGAACTGAACACTCAGTGATGGCTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378479.5 |
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| CDS GCA 90 bp | GCCGGGCTTCCATCTTCAGCTTCTCAATGCCCTATTATTCATTCCTaGCTGACTTTCTGTTCCGTGTCCTCCCTGCCTCAAATTTCCAAG | + |
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Preference number: 5 (lower is better) Translates to: AGLPSSASQCPIIHS*LTFCSVSSLPQISK Trigger: CTTGGAAATTTGAGGCAGGGAGGACACGGAACAGAAAGTCAGGCAGGAATGAATAATAGGGCATTGAGAAGCTGAAGATGGAAGCCCGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454673.1 |
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| CDS TCA 90 bp | GGCTTCCATCTTCAGCTTCTCAATGCCCTATTATTCATTCCTGCCTaGCTTTCTGTTCCGTGTCCTCCCTGCCTCAAATTTCCAAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: GFHLQLLNALLFIPA*LSVPCPPCLKFPSH Trigger: GTGGCTTGGAAATTTGAGGCAGGGAGGACACGGAACAGAAAGTCAGGCAGGAATGAATAATAGGGCATTGAGAAGCTGAAGATGGAAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454673.1 |
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| CDS GCA 90 bp | ACACACTCACACAAACACATACACACCCCACACACACCCCACAGGTaGTTAACTTTCTCCTCCATTCATTTGGGACCACTCATCATTCCC | + |
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Preference number: 5 (lower is better) Translates to: THSHKHIHTPHTPHR*LTFSSIHLGPLIIP Trigger: GGGAATGATGAGTGGTCCCAAATGAATGGAGGAGAAAGTTAAGCACCTGTGGGGTGTGTGTGGGGTGTGTATGTGTTTGTGTGAGTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454673.1 |
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| CDS GCA 90 bp | TTTAAAGCCAGGTGCAAAATCTTTCTGCCTCTACTTCCCACACCCTaGTCAACTTCTTTATTGCCCAACCCAACTGCCTCACCATCTCCC | + |
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Preference number: 5 (lower is better) Translates to: FKARCKIFLPLLPTP*STSLLPNPTASPSP Trigger: GGGAGATGGTGAGGCAGTTGGGTTGGGCAATAAAGAAGTTGAGCAGGGTGTGGGAAGTAGAGGCAGAAAGATTTTGCACCTGGCTTTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454673.1 |
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| CDS GCA 90 bp | CCGGTCTTGGAGGTGAAGGTCACCCATATCAACAAAAAGGCTTCCTaGTGTAAAATTCTCTCCGATCATCCGCTAAGGTCCTGTGTCTCT | + |
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Preference number: 5 (lower is better) Translates to: PVLEVKVTHINKKAS*CKILSDHPLRSCVS Trigger: AGAGACACAGGACCTTAGCGGATGATCGGAGAGAATTTTACAGCAGGAAGCCTTTTTGTTGATATGGGTGACCTTCACCTCCAAGACCGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000454673.1 |
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| CDS CCA 90 bp | ATTTATGCCTTCTTCCCTCTCCCCCACTTACGTCTTCCACACAGTTaGAAAGCCAGCAGCGTTAGGCTCTCTGGTGAAATACTAGATTTG | + |
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Preference number: 5 (lower is better) Translates to: IYAFFPLPHLRLPHS*KASSVRLSGEILDL Trigger: CAAATCTAGTATTTCACCAGAGAGCCTAACGCTGCTGGCTTTCCAACTGTGTGGAAGACGTAAGTGGGGGAGAGGGAAGAAGGCATAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000430650.2 |
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| CDS CCA 90 bp | AACTTCTTTATTGCCCAACCCAACTGCCTCACCATCTCCCCTTCTTaGGTCTCCTTGAAGCATCAGAAATACCTTCCAGCCTTTCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: NFFIAQPNCLTISPS*VSLKHQKYLPAFLL Trigger: AAGAAGAAAGGCTGGAAGGTATTTCTGATGCTTCAAGGAGACCCAAGAAGGGGAGATGGTGAGGCAGTTGGGTTGGGCAATAAAGAAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454673.1 |
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| CDS GCA 90 bp | TCATGTGCACGTCAAACGCTTAAACAAGAACCCAGAGTGTGGTCCTaGTCTCTGAATGGAGACTGTTTGCTTCTTGCAGTTTGTCTCATA | + |
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Preference number: 5 (lower is better) Translates to: SCARQTLKQEPRVWS*SLNGDCLLLAVCLI Trigger: TATGAGACAAACTGCAAGAAGCAAACAGTCTCCATTCAGAGAGCAGGACCACACTCTGGGTTCTTGTTTAAGCGTTTGACGTGCACATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000427020.6 ENST00000658738.1 |
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| CDS GCA 90 bp | AGTCATCATGGTGAAACTTCTTTAAAGCCAGGTGCAAAATCTTTCTaGCTCTACTTCCCACACCCTGCTCAACTTCTTTATTGCCCAACC | + |
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Preference number: 5 (lower is better) Translates to: SHHGETSLKPGAKSF*LYFPHPAQLLYCPT Trigger: GGTTGGGCAATAAAGAAGTTGAGCAGGGTGTGGGAAGTAGAGGCAGAAAGATTTTGCACCTGGCTTTAAAGAAGTTTCACCATGATGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454673.1 |
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| CDS TCA 90 bp | CATCCCTTCTCAGCTTGTCCTTTTTATGGCTTACAGGGTCAATTATaGATATATAGGTTGGGTTGCATCACCACTCACTCCATCCACAAG | + |
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Preference number: 5 (lower is better) Translates to: HPFSACPFYGLQGQL*IYRLGCITTHSIHK Trigger: CTTGTGGATGGAGTGAGTGGTGATGCAACCCAACCTATATATTCATAATTGACCCTGTAAGCCATAAAAAGGACAAGCTGAGAAGGGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000454673.1 |
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| CDS CCA 90 bp | CTTGTCCTTTTTATGGCTTACAGGGTCAATTATGAATATATAGGTTaGGTTGCATCACCACTCACTCCATCCACAAGTCTCCAACACCTT | + |
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Preference number: 5 (lower is better) Translates to: LVLFMAYRVNYEYIG*VASPLTPSTSLQHL Trigger: AAGGTGTTGGAGACTTGTGGATGGAGTGAGTGGTGATGCAACCCAACCTATATATTCATAATTGACCCTGTAAGCCATAAAAAGGACAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000454673.1 |
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| CDS GCA 90 bp | CCATCCCATCTCAGGCTTGTCTTTTGTTCTCCTAATGGGAGATTATaGAAGGCCTATCGTATTAAAGGAAATCACAAAAATGTGCTAAAC | + |
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Preference number: 5 (lower is better) Translates to: PSHLRLVFCSPNGRL*KAYRIKGNHKNVLN Trigger: GTTTAGCACATTTTTGTGATTTCCTTTAATACGATAGGCCTTGCATAATCTCCCATTAGGAGAACAAAAGACAAGCCTGAGATGGGATGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000430650.2 |
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| CDS TCA 72 bp | CCGGGCAGTTCGCGCTTCCGCGCCTCGGCACTCGGATaGCCGTGTCCTATTCGTCTCTCTCGTGAATGTCGC | + |
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Preference number: 6 (lower is better) Translates to: PGSSRFRASALG*PCPIRLSRECR Trigger: GCGACATTCACGAGAGAGACGAATAGGACACGGTCATCCGAGTGCCGAGGCGCGGAAGCGCGAACTGCCCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000427020.6 ENST00000658738.1 |
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| CDS CAA 90 bp | GAACCGCTCCCTTTCCCGCACACGCATTGCTGCCTCCTCTCGGGCTaGGTTAATGAGTCTGTGCGCCAAGCCAGGTCGCTCCGGGCAGTT | + |
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Preference number: 6 (lower is better) Translates to: EPLPFPHTHCCLLSG*VNESVRQARSLRAV Trigger: AACTGCCCGGAGCGACCTGGCTTGGCGCACAGACTCATTAACCAAGCCCGAGAGGAGGCAGCAATGCGTGTGCGGGAAAGGGAGCGGTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000427020.6 ENST00000658738.1 |
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| CDS GCA 72 bp | ATTGCTGCCTCCTCTCGGGCTTGGTTAATGAGTCTGTaGGCCAAGCCAGGTCGCTCCGGGCAGTTCGCGCTT | + |
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Preference number: 6 (lower is better) Translates to: IAASSRAWLMSL*AKPGRSGQFAL Trigger: AAGCGCGAACTGCCCGGAGCGACCTGGCTTGGCGCACAGACTCATTAACCAAGCCCGAGAGGAGGCAGCAAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000427020.6 ENST00000658738.1 |
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| CDS CCA 72 bp | CTTTCCCGCACACGCATTGCTGCCTCCTCTCGGGCTTaGTTAATGAGTCTGTGCGCCAAGCCAGGTCGCTCC | + |
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Preference number: 6 (lower is better) Translates to: LSRTRIAASSRA*LMSLCAKPGRS Trigger: GGAGCGACCTGGCTTGGCGCACAGACTCATTAACCAAGCCCGAGAGGAGGCAGCAATGCGTGTGCGGGAAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000427020.6 ENST00000658738.1 |
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| CDS CAA 72 bp | CCTTTCCCGCACACGCATTGCTGCCTCCTCTCGGGCTaGGTTAATGAGTCTGTGCGCCAAGCCAGGTCGCTC | + |
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Preference number: 6 (lower is better) Translates to: PFPHTHCCLLSG*VNESVRQARSL Trigger: GAGCGACCTGGCTTGGCGCACAGACTCATTAACCAAGCCCGAGAGGAGGCAGCAATGCGTGTGCGGGAAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000427020.6 ENST00000658738.1 |
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| CDS GCA 72 bp | CCTTCTACAGGCTCAAGGCTGGAAGGCCGCCTCCTTTaGTGTGGCTTGAAGTGGTTTGCGCAGACCGAGTCC | + |
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Preference number: 6 (lower is better) Translates to: PSTGSRLEGRLL*CGLKWFAQTES Trigger: GGACTCGGTCTGCGCAAACCACTTCAAGCCACAGCAAAGGAGGCGGCCTTCCAGCCTTGAGCCTGTAGAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378479.5 |
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| CDS CCA 72 bp | ACTAGATTTGGGTCGAGCCGCCGGCTGATGTCATGCTaGAGACCGCCTCTCCTGAGCACTAATGGGCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: TRFGSSRRLMSC*RPPLLSTNGLP Trigger: TGGCAGCCCATTAGTGCTCAGGAGAGGCGGTCTCCAGCATGACATCAGCCGGCGGCTCGACCCAAATCTAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000378479.5 ENST00000427020.6 ENST00000430650.2 ENST00000454673.1 ENST00000658738.1 |
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| CDS CCA 72 bp | CTGGCTGTCCACTGTGGCTGCAGTGCTGGCCATAGCTaGAGGATTCCCGCCACTGGGTTCTTTGCTTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: LAVHCGCSAGHS*RIPATGFFASA Trigger: AGCAGAAGCAAAGAACCCAGTGGCGGGAATCCTCCAGCTATGGCCAGCACTGCAGCCACAGTGGACAGCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454673.1 |
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| CDS CAA 90 bp | GCTGCAGTGCTGGCCATAGCTGGAGGATTCCCGCCACTGGGTTCTTaGCTTCTGCTTCTGCTTCCAGACTGCCCAGAAAGGCTGGAGCAA | + |
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Preference number: 6 (lower is better) Translates to: AAVLAIAGGFPPLGS*LLLLLPDCPERLEQ Trigger: TTGCTCCAGCCTTTCTGGGCAGTCTGGAAGCAGAAGCAGAAGCAAAGAACCCAGTGGCGGGAATCCTCCAGCTATGGCCAGCACTGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454673.1 |
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| CDS CAA 72 bp | ACCTTCTACAGGCTCAAGGCTGGAAGGCCGCCTCCTTaGCTGTGGCTTGAAGTGGTTTGCGCAGACCGAGTC | + |
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Preference number: 6 (lower is better) Translates to: TFYRLKAGRPPP*LWLEVVCADRV Trigger: GACTCGGTCTGCGCAAACCACTTCAAGCCACAGCAAAGGAGGCGGCCTTCCAGCCTTGAGCCTGTAGAAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378479.5 |
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| CDS TCA 72 bp | AGATGGCCTGATGATGAAGGGCTCGTCCAGAGCCTCTaGGCTGCAGCAGCTGAGTCCAAGCATCCAGGTACA | + |
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Preference number: 6 (lower is better) Translates to: RWPDDEGLVQSL*AAAAESKHPGT Trigger: TGTACCTGGATGCTTGGACTCAGCTGCTGCAGCTCAGAGGCTCTGGACGAGCCCTTCATCATCAGGCCATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000427020.6 ENST00000430650.2 ENST00000658738.1 |
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| CDS GCA 72 bp | AATACTAGATTTGGGTCGAGCCGCCGGCTGATGTCATaGTGGAGACCGCCTCTCCTGAGCACTAATGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: NTRFGSSRRLMS*WRPPLLSTNGL Trigger: CAGCCCATTAGTGCTCAGGAGAGGCGGTCTCCAGCATGACATCAGCCGGCGGCTCGACCCAAATCTAGTATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000378479.5 ENST00000427020.6 ENST00000430650.2 ENST00000454673.1 ENST00000658738.1 |
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| CDS CCA 72 bp | TACAGGCTCAAGGCTGGAAGGCCGCCTCCTTTGCTGTaGCTTGAAGTGGTTTGCGCAGACCGAGTCCAGATA | + |
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Preference number: 6 (lower is better) Translates to: YRLKAGRPPPLL*LEVVCADRVQI Trigger: TATCTGGACTCGGTCTGCGCAAACCACTTCAAGCCACAGCAAAGGAGGCGGCCTTCCAGCCTTGAGCCTGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378479.5 |
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| CDS CAA 72 bp | GGCTCAAGGCTGGAAGGCCGCCTCCTTTGCTGTGGCTaGAAGTGGTTTGCGCAGACCGAGTCCAGATATGTA | + |
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Preference number: 6 (lower is better) Translates to: GSRLEGRLLCCG*KWFAQTESRYV Trigger: TACATATCTGGACTCGGTCTGCGCAAACCACTTCAAGCCACAGCAAAGGAGGCGGCCTTCCAGCCTTGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378479.5 |
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| CDS CAA 72 bp | CTGGCCATAGCTGGAGGATTCCCGCCACTGGGTTCTTaGCTTCTGCTTCTGCTTCCAGACTGCCCAGAAAGG | + |
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Preference number: 6 (lower is better) Translates to: LAIAGGFPPLGS*LLLLLPDCPER Trigger: CCTTTCTGGGCAGTCTGGAAGCAGAAGCAGAAGCAAAGAACCCAGTGGCGGGAATCCTCCAGCTATGGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454673.1 |
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| CDS TCA 72 bp | CTTCCAGACTGCCCAGAAAGGCTGGAGCAAATGTCATaGCTGTGCAGACGAGGATGTTGCAGAGCCGGGCTT | + |
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Preference number: 6 (lower is better) Translates to: LPDCPERLEQMS*LCRRGCCRAGL Trigger: AAGCCCGGCTCTGCAACATCCTCGTCTGCACAGTCATGACATTTGCTCCAGCCTTTCTGGGCAGTCTGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454673.1 |
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| CDS GCA 72 bp | GACCTTGAACTTCTCAGCCTCCATAACCAAGAGTGCTaGTCTGATCCCAGGGACCACTACATAGGGAGTCCG | + |
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Preference number: 6 (lower is better) Translates to: DLELLSLHNQEC*SDPRDHYIGSP Trigger: CGGACTCCCTATGTAGTGGTCCCTGGGATCAGAGCAGCACTCTTGGTTATGGAGGCTGAGAAGTTCAAGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427020.6 |
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| CDS CCA 72 bp | AGGCTGGAAGGCCGCCTCCTTTGCTGTGGCTTGAAGTaGTTTGCGCAGACCGAGTCCAGATATGTAATAGCT | + |
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Preference number: 6 (lower is better) Translates to: RLEGRLLCCGLK*FAQTESRYVIA Trigger: AGCTATTACATATCTGGACTCGGTCTGCGCAAACCACTTCAAGCCACAGCAAAGGAGGCGGCCTTCCAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378479.5 |
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| CDS CAA 90 bp | CCTTCTACAGGCTCAAGGCTGGAAGGCCGCCTCCTTTGCTGTGGCTaGAAGTGGTTTGCGCAGACCGAGTCCAGATATGTAATAGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: PSTGSRLEGRLLCCG*KWFAQTESRYVIAV Trigger: AACAGCTATTACATATCTGGACTCGGTCTGCGCAAACCACTTCAAGCCACAGCAAAGGAGGCGGCCTTCCAGCCTTGAGCCTGTAGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378479.5 |
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| CDS CCA 72 bp | ATCGTTCATGGCCACAACAGGAAGGTGACAGGAACATaGTGTCAGGGCCTCAGCTTATCACGAAGTCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: IVHGHNRKVTGT*CQGLSLSRSLR Trigger: CCTCAGACTTCGTGATAAGCTGAGGCCCTGACACCATGTTCCTGTCACCTTCCTGTTGTGGCCATGAACGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000427020.6 ENST00000430650.2 ENST00000658738.1 |
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| CDS CCA 72 bp | ATTGCCCAACCCAACTGCCTCACCATCTCCCCTTCTTaGGTCTCCTTGAAGCATCAGAAATACCTTCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: IAQPNCLTISPS*VSLKHQKYLPA Trigger: GGCTGGAAGGTATTTCTGATGCTTCAAGGAGACCCAAGAAGGGGAGATGGTGAGGCAGTTGGGTTGGGCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454673.1 |
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| CDS CCA 72 bp | CCCTCGCTCCCCCTTGTCTTTACCTTAACTGTTCTCTaGTCTATCGCACCTTCTTCCTGCTGCTTTGCAAGC | + |
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Preference number: 6 (lower is better) Translates to: PSLPLVFTLTVL*SIAPSSCCFAS Trigger: GCTTGCAAAGCAGCAGGAAGAAGGTGCGATAGACCAGAGAACAGTTAAGGTAAAGACAAGGGGGAGCGAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000454673.1 |
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| CDS CAA 72 bp | GCTGGAGCAAATGTCATGACTGTGCAGACGAGGATGTaGCAGAGCCGGGCTTCCATCTTCAGCTTCTCAATG | + |
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Preference number: 6 (lower is better) Translates to: AGANVMTVQTRM*QSRASIFSFSM Trigger: CATTGAGAAGCTGAAGATGGAAGCCCGGCTCTGCAACATCCTCGTCTGCACAGTCATGACATTTGCTCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454673.1 |
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| CDS CAA 90 bp | CCCAGAAAGGCTGGAGCAAATGTCATGACTGTGCAGACGAGGATGTaGCAGAGCCGGGCTTCCATCTTCAGCTTCTCAATGCCCTATTAT | + |
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Preference number: 6 (lower is better) Translates to: PRKAGANVMTVQTRM*QSRASIFSFSMPYY Trigger: ATAATAGGGCATTGAGAAGCTGAAGATGGAAGCCCGGCTCTGCAACATCCTCGTCTGCACAGTCATGACATTTGCTCCAGCCTTTCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454673.1 |
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| CDS TCA 72 bp | CAAGTCTGTTTTACTGTTCTTCCAAGAGTGCTGCTCTaGTCCCAGGGACCACTACATAGGGAGTCCGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: QVCFTVLPRVLL*SQGPLHRESEA Trigger: AGCCTCGGACTCCCTATGTAGTGGTCCCTGGGATCAGAGCAGCACTCTTGGAAGAACAGTAAAACAGACTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000430650.2 ENST00000658738.1 |
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| CDS TCA 72 bp | GCTGGTTCCTTGCCTCGGAACATTATCCTCCCCTTTTaGAATCCTACGTGGCTTGTAAGGCTCACCTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: AGSLPRNIILPF*NPTWLVRLTSS Trigger: GGAAGAGGTGAGCCTTACAAGCCACGTAGGATTTCAAAAGGGGAGGATAATGTTCCGAGGCAAGGAACCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454673.1 |
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| CDS GCA 72 bp | CTTGACCTTGAACTTCTCAGCCTCCATAACCAAGAGTaGTGCTCTGATCCCAGGGACCACTACATAGGGAGT | + |
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Preference number: 6 (lower is better) Translates to: LDLELLSLHNQE*CSDPRDHYIGS Trigger: ACTCCCTATGTAGTGGTCCCTGGGATCAGAGCAGCACTCTTGGTTATGGAGGCTGAGAAGTTCAAGGTCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427020.6 |
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| CDS CCA 72 bp | TTCTTCCCTCTCCCCCACTTACGTCTTCCACACAGTTaGAAAGCCAGCAGCGTTAGGCTCTCTGGTGAAATA | + |
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Preference number: 6 (lower is better) Translates to: FFPLPHLRLPHS*KASSVRLSGEI Trigger: TATTTCACCAGAGAGCCTAACGCTGCTGGCTTTCCAACTGTGTGGAAGACGTAAGTGGGGGAGAGGGAAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000430650.2 |
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| CDS CCA 72 bp | TGCTTCTGCTTCTGCTTCCAGACTGCCCAGAAAGGCTaGAGCAAATGTCATGACTGTGCAGACGAGGATGTT | + |
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Preference number: 6 (lower is better) Translates to: CFCFCFQTAQKG*SKCHDCADEDV Trigger: AACATCCTCGTCTGCACAGTCATGACATTTGCTCCAGCCTTTCTGGGCAGTCTGGAAGCAGAAGCAGAAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454673.1 |
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| CDS CAA 72 bp | TATTGCCCAACCCAACTGCCTCACCATCTCCCCTTCTaGGGTCTCCTTGAAGCATCAGAAATACCTTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: YCPTQLPHHLPF*GLLEASEIPSS Trigger: GCTGGAAGGTATTTCTGATGCTTCAAGGAGACCCAAGAAGGGGAGATGGTGAGGCAGTTGGGTTGGGCAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454673.1 |
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| CDS CAA 72 bp | GCCCCTCCCATGATCCTGCTCCATCAGAGTCCCCTCTaGGGTGCCTTTCAATCTCTCCCTCCTTATTATTTA | + |
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Preference number: 6 (lower is better) Translates to: APPMILLHQSPL*GAFQSLPPYYL Trigger: TAAATAATAAGGAGGGAGAGATTGAAAGGCACCCAAGAGGGGACTCTGATGGAGCAGGATCATGGGAGGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454673.1 |
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| CDS CAA 90 bp | ATTGCCCAACCCAACTGCCTCACCATCTCCCCTTCTTGGGTCTCCTaGAAGCATCAGAAATACCTTCCAGCCTTTCTTCTTGGAACTTCC | + |
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Preference number: 6 (lower is better) Translates to: IAQPNCLTISPSWVS*KHQKYLPAFLLGTS Trigger: GGAAGTTCCAAGAAGAAAGGCTGGAAGGTATTTCTGATGCTTCAAGGAGACCCAAGAAGGGGAGATGGTGAGGCAGTTGGGTTGGGCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454673.1 |
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| CDS GCA 72 bp | CACAAACACATACACACCCCACACACACCCCACAGGTaGTTAACTTTCTCCTCCATTCATTTGGGACCACTC | + |
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Preference number: 6 (lower is better) Translates to: HKHIHTPHTPHR*LTFSSIHLGPL Trigger: GAGTGGTCCCAAATGAATGGAGGAGAAAGTTAAGCACCTGTGGGGTGTGTGTGGGGTGTGTATGTGTTTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454673.1 |
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| CDS CAA 90 bp | TGGAATGGATCCCCCTCTCCACCCATTCTCCATCCCATCTCAGGCTaGTCTTTTGTTCTCCTAATGGGAGATTATGCAAGGCCTATCGTA | + |
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Preference number: 6 (lower is better) Translates to: WNGSPSPPILHPISG*SFVLLMGDYARPIV Trigger: TACGATAGGCCTTGCATAATCTCCCATTAGGAGAACAAAAGACAAGCCTGAGATGGGATGGAGAATGGGTGGAGAGGGGGATCCATTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000430650.2 |
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| CDS GCA 72 bp | AGGTGCAAAATCTTTCTGCCTCTACTTCCCACACCCTaGTCAACTTCTTTATTGCCCAACCCAACTGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: RCKIFLPLLPTP*STSLLPNPTAS Trigger: TGAGGCAGTTGGGTTGGGCAATAAAGAAGTTGAGCAGGGTGTGGGAAGTAGAGGCAGAAAGATTTTGCACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454673.1 |
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| CDS GCA 72 bp | TGTTGCAGAGCCGGGCTTCCATCTTCAGCTTCTCAATaGCCTATTATTCATTCCTGCCTGACTTTCTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: CCRAGLPSSASQ*PIIHSCLTFCS Trigger: GGAACAGAAAGTCAGGCAGGAATGAATAATAGGGCATTGAGAAGCTGAAGATGGAAGCCCGGCTCTGCAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454673.1 |
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| CDS CAA 72 bp | ACCCCTGACTCCTACACGAGTATTCTGCTCCAGGAATaGCAAGGAAGTTTAAGGATTAGGAGAGATGGGGGT | + |
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Preference number: 6 (lower is better) Translates to: TPDSYTSILLQE*QGSLRIRRDGG Trigger: ACCCCCATCTCTCCTAATCCTTAAACTTCCTTGCAATTCCTGGAGCAGAATACTCGTGTAGGAGTCAGGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000378479.5 ENST00000413669.2 |
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| CDS CAA 72 bp | TCAAGAATGTCTCTCGCCAGACGTGGTAACTTGACCTaGAACTTCTCAGCCTCCATAACCAAGAGTGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: SRMSLARRGNLT*NFSASITKSAA Trigger: AGCAGCACTCTTGGTTATGGAGGCTGAGAAGTTCAAGGTCAAGTTACCACGTCTGGCGAGAGACATTCTTGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427020.6 |
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| CDS CAA 90 bp | TGTTCTTCATCAAGAATGTCTCTCGCCAGACGTGGTAACTTGACCTaGAACTTCTCAGCCTCCATAACCAAGAGTGCTGCTCTGATCCCA | + |
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Preference number: 6 (lower is better) Translates to: CSSSRMSLARRGNLT*NFSASITKSAALIP Trigger: TGGGATCAGAGCAGCACTCTTGGTTATGGAGGCTGAGAAGTTCAAGGTCAAGTTACCACGTCTGGCGAGAGACATTCTTGATGAAGAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427020.6 |
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| CDS CAA 90 bp | TCAGTGTTTTGCTGGTTCCTTGCCTCGGAACATTATCCTCCCCTTTaGAAATCCTACGTGGCTTGTAAGGCTCACCTCTTCCATGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: SVFCWFLASEHYPPL*KSYVACKAHLFHEA Trigger: AGCTTCATGGAAGAGGTGAGCCTTACAAGCCACGTAGGATTTCAAAAGGGGAGGATAATGTTCCGAGGCAAGGAACCAGCAAAACACTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000454673.1 |
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| CDS CAA 90 bp | CAACTTCTTTATTGCCCAACCCAACTGCCTCACCATCTCCCCTTCTaGGGTCTCCTTGAAGCATCAGAAATACCTTCCAGCCTTTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: QLLYCPTQLPHHLPF*GLLEASEIPSSLSS Trigger: AGAAGAAAGGCTGGAAGGTATTTCTGATGCTTCAAGGAGACCCAAGAAGGGGAGATGGTGAGGCAGTTGGGTTGGGCAATAAAGAAGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000454673.1 |
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| CDS CAA 90 bp | CACATTTGGTCTCCAAATTTAACCCAAGACAAGGCTGTACCGGTCTaGGAGGTGAAGGTCACCCATATCAACAAAAAGGCTTCCTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: HIWSPNLTQDKAVPV*EVKVTHINKKASCC Trigger: ACAGCAGGAAGCCTTTTTGTTGATATGGGTGACCTTCACCTCCAAGACCGGTACAGCCTTGTCTTGGGTTAAATTTGGAGACCAAATGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000454673.1 |
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| CDS TCA 72 bp | ACTGAGTGTTCAGTTCCACTCAAAACAGAGCTGAGTTaGCAGAACGTGCCATCAGAGCTGGAAGCTCAACAT | + |
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Preference number: 6 (lower is better) Translates to: TECSVPLKTELS*QNVPSELEAQH Trigger: ATGTTGAGCTTCCAGCTCTGATGGCACGTTCTGTCAACTCAGCTCTGTTTTGAGTGGAACTGAACACTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378479.5 |
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| CDS TCA 72 bp | TTAAGGATTAGGAGAGATGGGGGTAGAAGGAATGGGTaGAGTCAGGACTCAGTATGGTTGGCCCTCTATATC | + |
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Preference number: 6 (lower is better) Translates to: LRIRRDGGRRNG*SQDSVWLALYI Trigger: GATATAGAGGGCCAACCATACTGAGTCCTGACTTCACCCATTCCTTCTACCCCCATCTCTCCTAATCCTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378479.5 ENST00000413669.2 |
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| CDS TCA 72 bp | ATAGAAGCATTGCTTCTAGGAAGGGAAGACAACCCCTaGCTCCTACACGAGTATTCTGCTCCAGGAATTGCA | + |
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Preference number: 6 (lower is better) Translates to: IEALLLGREDNP*LLHEYSAPGIA Trigger: TGCAATTCCTGGAGCAGAATACTCGTGTAGGAGTCAGGGGTTGTCTTCCCTTCCTAGAAGCAATGCTTCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378479.5 ENST00000413669.2 |
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| CDS TCA 72 bp | CGCTTAAACAAGAACCCAGAGTGTGGTCCTGCTCTCTaGATGGAGACTGTTTGCTTCTTGCAGTTTGTCTCA | + |
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Preference number: 6 (lower is better) Translates to: RLNKNPECGPAL*METVCFLQFVS Trigger: TGAGACAAACTGCAAGAAGCAAACAGTCTCCATTCAGAGAGCAGGACCACACTCTGGGTTCTTGTTTAAGCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000427020.6 ENST00000658738.1 |
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| CDS GCA 72 bp | CGTCAAACGCTTAAACAAGAACCCAGAGTGTGGTCCTaGTCTCTGAATGGAGACTGTTTGCTTCTTGCAGTT | + |
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Preference number: 6 (lower is better) Translates to: RQTLKQEPRVWS*SLNGDCLLLAV Trigger: AACTGCAAGAAGCAAACAGTCTCCATTCAGAGAGCAGGACCACACTCTGGGTTCTTGTTTAAGCGTTTGACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000427020.6 ENST00000658738.1 |
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| CDS CCA 72 bp | TTGTCTTTGTTACGCCTGTATCGTCTTCCACACAGTTaGAAAGCCAGCAGCGTTAGGCTCTCTGGTGAAATA | + |
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Preference number: 6 (lower is better) Translates to: LSLLRLYRLPHS*KASSVRLSGEI Trigger: TATTTCACCAGAGAGCCTAACGCTGCTGGCTTTCCAACTGTGTGGAAGACGATACAGGCGTAACAAAGACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000427020.6 ENST00000454673.1 ENST00000658738.1 |
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| CDS CCA 72 bp | TGTGCACGTCAAACGCTTAAACAAGAACCCAGAGTGTaGTCCTGCTCTCTGAATGGAGACTGTTTGCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: CARQTLKQEPRV*SCSLNGDCLLL Trigger: AAGAAGCAAACAGTCTCCATTCAGAGAGCAGGACCACACTCTGGGTTCTTGTTTAAGCGTTTGACGTGCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000427020.6 ENST00000658738.1 |
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| CDS TCA 72 bp | CTTCAGCTTCTCAATGCCCTATTATTCATTCCTGCCTaGCTTTCTGTTCCGTGTCCTCCCTGCCTCAAATTT | + |
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Preference number: 6 (lower is better) Translates to: LQLLNALLFIPA*LSVPCPPCLKF Trigger: AAATTTGAGGCAGGGAGGACACGGAACAGAAAGTCAGGCAGGAATGAATAATAGGGCATTGAGAAGCTGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454673.1 |
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| CDS CAA 72 bp | TCTTCATCAAGAATGTCTCTCGCCAGACGTGGTAACTaGACCTTGAACTTCTCAGCCTCCATAACCAAGAGT | + |
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Preference number: 6 (lower is better) Translates to: SSSRMSLARRGN*TLNFSASITKS Trigger: ACTCTTGGTTATGGAGGCTGAGAAGTTCAAGGTCAAGTTACCACGTCTGGCGAGAGACATTCTTGATGAAGA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427020.6 |
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| CDS CCA 72 bp | TGTAATAGCTGTTCGCTATTTTGTCTTCCACACAGTTaGAAAGCCAGCAGCGTTAGGCTCTCTGGTGAAATA | + |
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Preference number: 6 (lower is better) Translates to: CNSCSLFCLPHS*KASSVRLSGEI Trigger: TATTTCACCAGAGAGCCTAACGCTGCTGGCTTTCCAACTGTGTGGAAGACAAAATAGCGAACAGCTATTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000378479.5 |
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| CDS CAA 72 bp | TGTCTCTCCATCACAGGACTTATTTCATCCTTGTCTTaGTTACGCCTGTATCGTCTTCCACACAGTTGGAAA | + |
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Preference number: 6 (lower is better) Translates to: CLSITGLISSLS*LRLYRLPHSWK Trigger: TTTCCAACTGTGTGGAAGACGATACAGGCGTAACAAAGACAAGGATGAAATAAGTCCTGTGATGGAGAGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000427020.6 ENST00000454673.1 ENST00000658738.1 |
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| CDS CAA 72 bp | TTTGCTTGTCTCTCCATCACAGGACTTATTTCATCCTaGTCTTTGTTACGCCTGTATCGTCTTCCACACAGT | + |
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Preference number: 6 (lower is better) Translates to: FACLSITGLISS*SLLRLYRLPHS Trigger: ACTGTGTGGAAGACGATACAGGCGTAACAAAGACAAGGATGAAATAAGTCCTGTGATGGAGAGACAAGCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000427020.6 ENST00000454673.1 ENST00000658738.1 |
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| CDS CCA 72 bp | TTTATGGCTTACAGGGTCAATTATGAATATATAGGTTaGGTTGCATCACCACTCACTCCATCCACAAGTCTC | + |
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Preference number: 6 (lower is better) Translates to: FMAYRVNYEYIG*VASPLTPSTSL Trigger: GAGACTTGTGGATGGAGTGAGTGGTGATGCAACCCAACCTATATATTCATAATTGACCCTGTAAGCCATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000454673.1 |
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| CDS CAA 90 bp | CTCGGATGGAAACTCTTTAATTTACTCTCCCAAACAGATCATCATTaGAGCTATTCCACTGAAGTCAAGCATGAAATCTATTTAGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: LGWKLFNLLSQTDHH*SYSTEVKHEIYLAG Trigger: TCCAGCTAAATAGATTTCATGCTTGACTTCAGTGGAATAGCTCAAATGATGATCTGTTTGGGAGAGTAAATTAAAGAGTTTCCATCCGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378479.5 ENST00000413669.2 |
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