Pregenerated sensors for LINC01119 (Homo sapiens)
Ensembl gene IDs: ENSG00000239332Ensembl transcript IDs: ENST00000422294.4, ENST00000468141.2, ENST00000490950.5, ENST00000495449.1, ENST00000653090.1
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GGCCAGCCCATGGAGAGGGTGCTCCACTCCCCAGCATGCACATCCTaGGCAGGCCCCAGAGCCCGAGAGGTGGATGACCTATGTCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: GQPMERVLHSPACTS*AGPRAREVDDLCLG Trigger: CCCCAGACATAGGTCATCCACCTCTCGGGCTCTGGGGCCTGCTCAGGATGTGCATGCTGGGGAGTGGAGCACCCTCTCCATGGGCTGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653090.1 |
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| CDS TCA 90 bp | GTCATCCTGCTGTCCCGGCTCAGGACCACTGTCTGTTGTGGGGCCTaGGGACAGGCCAGCCCATGGAGAGGGTGCTCCACTCCCCAGCAT | + |
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Preference number: 5 (lower is better) Translates to: VILLSRLRTTVCCGA*GQASPWRGCSTPQH Trigger: ATGCTGGGGAGTGGAGCACCCTCTCCATGGGCTGGCCTGTCCTCAGGCCCCACAACAGACAGTGGTCCTGAGCCGGGACAGCAGGATGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653090.1 |
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| CDS CCA 90 bp | AGCCTTTGTCATCCTGCTGTCCCGGCTCAGGACCACTGTCTGTTGTaGGGCCTGAGGACAGGCCAGCCCATGGAGAGGGTGCTCCACTCC | + |
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Preference number: 5 (lower is better) Translates to: SLCHPAVPAQDHCLL*GLRTGQPMERVLHS Trigger: GGAGTGGAGCACCCTCTCCATGGGCTGGCCTGTCCTCAGGCCCCACAACAGACAGTGGTCCTGAGCCGGGACAGCAGGATGACAAAGGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653090.1 |
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| CDS CCA 90 bp | AGGGAGAGGCCGAAGATTATCCAAGACAGCCTTCACCAGCTACCCTaGGGTGCAAGGGCAAACCTGATTCCCATTCCCCCTGAGCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: RERPKIIQDSLHQLP*GARANLIPIPPEPR Trigger: CCTGGGCTCAGGGGGAATGGGAATCAGGTTTGCCCTTGCACCCCAGGGTAGCTGGTGAAGGCTGTCTTGGATAATCTTCGGCCTCTCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000468141.2 |
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| CDS CCA 90 bp | AAAGAGCCAGTCCTAGGCACACGGCCACACCCATCCCACACTGCCTaGGGAAAGGGATTCCAGTGTCCCCACTGGCAATGGCATGTCTCT | + |
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Preference number: 5 (lower is better) Translates to: KEPVLGTRPHPSHTA*GKGFQCPHWQWHVS Trigger: AGAGACATGCCATTGCCAGTGGGGACACTGGAATCCCTTTCCCCAGGCAGTGTGGGATGGGTGTGGCCGTGTGCCTAGGACTGGCTCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653090.1 |
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| CDS GCA 90 bp | TCTCACAGGACACAGAGCGGAGGGGCACTCCAAGTCAGCAGGAACTaGAACTATCACTGTCCCAGGAAGGCAAGCACGGGAGTAGCAGAG | + |
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Preference number: 5 (lower is better) Translates to: SHRTQSGGALQVSRN*NYHCPRKASTGVAE Trigger: CTCTGCTACTCCCGTGCTTGCCTTCCTGGGACAGTGATAGTTGCAGTTCCTGCTGACTTGGAGTGCCCCTCCGCTCTGTGTCCTGTGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468141.2 |
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| CDS GCA 90 bp | TATGGTCCCTCAAGGCTAGAGGGTGGCACTGGTGTTTGTGGGCGATaGTTCCAAGTTCAAAGGCTAGCAGGGTGGGGCCCTGTCGAAGAG | + |
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Preference number: 5 (lower is better) Translates to: YGPSRLEGGTGVCGR*FQVQRLAGWGPVEE Trigger: CTCTTCGACAGGGCCCCACCCTGCTAGCCTTTGAACTTGGAAGCATCGCCCACAAACACCAGTGCCACCCTCTAGCCTTGAGGGACCATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000468141.2 ENST00000490950.5 ENST00000653090.1 |
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| CDS TCA 90 bp | CCTGCAGCACCAGAGCAGAAAGCAGACAGCGTGCAGGAGCTTGTTTaGAAGCCACCGTCTACCACGCATCTGCCCAGGCCAATTCAGAGA | + |
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Preference number: 5 (lower is better) Translates to: PAAPEQKADSVQELV*KPPSTTHLPRPIQR Trigger: TCTCTGAATTGGCCTGGGCAGATGCGTGGTAGACGGTGGCTTTCAAACAAGCTCCTGCACGCTGTCTGCTTTCTGCTCTGGTGCTGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468141.2 |
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| CDS CCA 90 bp | ACTGGTGTTTGTGGGCGATGCTTCCAAGTTCAAAGGCTAGCAGGGTaGGGCCCTGTCGAAGAGAGGCTGACAGAGTGTAGCTTGCCACAG | + |
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Preference number: 5 (lower is better) Translates to: TGVCGRCFQVQRLAG*GPVEERLTECSLPQ Trigger: CTGTGGCAAGCTACACTCTGTCAGCCTCTCTTCGACAGGGCCCCACCCTGCTAGCCTTTGAACTTGGAAGCATCGCCCACAAACACCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000468141.2 ENST00000490950.5 ENST00000653090.1 |
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| CDS TCA 90 bp | GGGTTTCCCCTCTCCTCTTGTACTTTCAGCGGCAGAAAGGTGCACTaGGCGGACATGGGATTCCACACTGGAGTCCAAGCTCACATGTCT | + |
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Preference number: 5 (lower is better) Translates to: GFPLSSCTFSGRKVH*ADMGFHTGVQAHMS Trigger: AGACATGTGAGCTTGGACTCCAGTGTGGAATCCCATGTCCGCTCAGTGCACCTTTCTGCCGCTGAAAGTACAAGAGGAGAGGGGAAACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422294.4 |
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| CDS TCA 90 bp | CAGCCCAGCAGCTGCTCATCATTGGCTGTACATTGGAATCATCTGTaGCAGTCCTCATGGTCAGCTCCACCTGTGGGTTTCCCCTCTCCT | + |
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Preference number: 5 (lower is better) Translates to: QPSSCSSLAVHWNHL*QSSWSAPPVGFPSP Trigger: AGGAGAGGGGAAACCCACAGGTGGAGCTGACCATGAGGACTGTCACAGATGATTCCAATGTACAGCCAATGATGAGCAGCTGCTGGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422294.4 |
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| CDS GCA 90 bp | CAGGAAGTGCCAGGATTGCAGAGAAGGCATGGAGATCATTTCAATTaGCTGCAGCACCAGAGCAGAAAGCAGACAGCGTGCAGGAGCTTG | + |
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Preference number: 5 (lower is better) Translates to: QEVPGLQRRHGDHFN*LQHQSRKQTACRSL Trigger: CAAGCTCCTGCACGCTGTCTGCTTTCTGCTCTGGTGCTGCAGGCAATTGAAATGATCTCCATGCCTTCTCTGCAATCCTGGCACTTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468141.2 |
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| CDS CCA 90 bp | TTCAGCCCAGCAGCTGCTCATCATTGGCTGTACATTGGAATCATCTaGCTGCCTGTCTCTTCCAGCCCAACACCTCATCACCTCCGAGTT | + |
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Preference number: 5 (lower is better) Translates to: FSPAAAHHWLYIGII*LPVSSSPTPHHLRV Trigger: AACTCGGAGGTGATGAGGTGTTGGGCTGGAAGAGACAGGCAGCCAGATGATTCCAATGTACAGCCAATGATGAGCAGCTGCTGGGCTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490950.5 |
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| CDS CCA 90 bp | CATCCTGAGCAGGCCCCAGAGCCCGAGAGGTGGATGACCTATGTCTaGGGTCTAGCTTCCAGGTCTGGGTTCTGGTTATTTCTGATTTTT | + |
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Preference number: 5 (lower is better) Translates to: HPEQAPEPERWMTYV*GLASRSGFWLFLIF Trigger: AAAAATCAGAAATAACCAGAACCCAGACCTGGAAGCTAGACCCCAGACATAGGTCATCCACCTCTCGGGCTCTGGGGCCTGCTCAGGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653090.1 |
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| CDS CCA 90 bp | GATTCACAGAGACATATATGGTCCCTCAAGGCTAGAGGGTGGCACTaGTGTTTGTGGGCGATGCTTCCAAGTTCAAAGGCTAGCAGGGTG | + |
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Preference number: 5 (lower is better) Translates to: DSQRHIWSLKARGWH*CLWAMLPSSKASRV Trigger: CACCCTGCTAGCCTTTGAACTTGGAAGCATCGCCCACAAACACCAGTGCCACCCTCTAGCCTTGAGGGACCATATATGTCTCTGTGAATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000468141.2 ENST00000490950.5 ENST00000653090.1 |
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| CDS TCA 90 bp | AGCCTCCTGCCCCCTCCTCTTCATCATGACTATTCTTTCCTGCCCTaGCGTGGGATTCTCACTCCATTCTGCCTCCCCAACCATTTATTT | + |
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Preference number: 5 (lower is better) Translates to: SLLPPPLHHDYSFLP*RGILTPFCLPNHLF Trigger: AAATAAATGGTTGGGGAGGCAGAATGGAGTGAGAATCCCACGTCAGGGCAGGAAAGAATAGTCATGATGAAGAGGAGGGGGCAGGAGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000653090.1 |
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| CDS GCA 90 bp | AAGTGCCAGGATTGCAGAGAAGGCATGGAGATCATTTCAATTGCCTaGAGCACCAGAGCAGAAAGCAGACAGCGTGCAGGAGCTTGTTTG | + |
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Preference number: 5 (lower is better) Translates to: KCQDCREGMEIISIA*STRAESRQRAGACL Trigger: CAAACAAGCTCCTGCACGCTGTCTGCTTTCTGCTCTGGTGCTGCAGGCAATTGAAATGATCTCCATGCCTTCTCTGCAATCCTGGCACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468141.2 |
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| CDS GCA 90 bp | AGGGAAGTCACTGTCAGACCCCACAGAATCAGGAAGTGCCAGGATTaGAGAGAAGGCATGGAGATCATTTCAATTGCCTGCAGCACCAGA | + |
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Preference number: 5 (lower is better) Translates to: REVTVRPHRIRKCQD*REGMEIISIACSTR Trigger: TCTGGTGCTGCAGGCAATTGAAATGATCTCCATGCCTTCTCTGCAATCCTGGCACTTCCTGATTCTGTGGGGTCTGACAGTGACTTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468141.2 |
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| CDS GCA 90 bp | CCTACAACTGGTATAAAATGGCCCCAGTCCCTTCAGCCCAGCAGCTaGTCATCATTGGCTGTACATTGGAATCATCCGCTTTCTCACAGG | + |
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Preference number: 5 (lower is better) Translates to: PTTGIKWPQSLQPSS*SSLAVHWNHPLSHR Trigger: CCTGTGAGAAAGCGGATGATTCCAATGTACAGCCAATGATGAGCAGCTGCTGGGCTGAAGGGACTGGGGCCATTTTATACCAGTTGTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000468141.2 |
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| CDS CCA 90 bp | CGTTCAGACGGACTCACGCAGACTAGAGATGCTCTCTTAAGACCTTaGAGCTCATCCGAAAGGGAACACCTCATGGATCTGCTGAATGTG | + |
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Preference number: 5 (lower is better) Translates to: RSDGLTQTRDALLRP*SSSEREHLMDLLNV Trigger: CACATTCAGCAGATCCATGAGGTGTTCCCTTTCGGATGAGCTCCAAGGTCTTAAGAGAGCATCTCTAGTCTGCGTGAGTCCGTCTGAACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000468141.2 ENST00000490950.5 ENST00000495449.1 ENST00000653090.1 |
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| CDS CCA 90 bp | AACGGAGATTCACAGAGACATATATGGTCCCTCAAGGCTAGAGGGTaGCACTGGTGTTTGTGGGCGATGCTTCCAAGTTCAAAGGCTAGC | + |
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Preference number: 5 (lower is better) Translates to: NGDSQRHIWSLKARG*HWCLWAMLPSSKAS Trigger: GCTAGCCTTTGAACTTGGAAGCATCGCCCACAAACACCAGTGCCACCCTCTAGCCTTGAGGGACCATATATGTCTCTGTGAATCTCCGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000468141.2 ENST00000490950.5 ENST00000653090.1 |
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| CDS CCA 90 bp | TCTCCTCTTGTACTTTCAGCGGCAGAAAGGTGCACTGAGCGGACATaGGATTCCACACTGGAGTCCAAGCTCACATGTCTTGTTTTTGTT | + |
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Preference number: 5 (lower is better) Translates to: SPLVLSAAERCTERT*DSTLESKLTCLVFV Trigger: AACAAAAACAAGACATGTGAGCTTGGACTCCAGTGTGGAATCCCATGTCCGCTCAGTGCACCTTTCTGCCGCTGAAAGTACAAGAGGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000422294.4 |
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| CDS TCA 90 bp | GGGTTCAGGAGAATAAAGAATCGCAGGTATTTCAAGGGAGCAAACTaGGGGAGCCCATTCCCTAGAGGAATGAGGTTGCTTTTTGGGAGT | + |
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Preference number: 5 (lower is better) Translates to: GFRRIKNRRYFKGAN*GSPFPRGMRLLFGS Trigger: ACTCCCAAAAAGCAACCTCATTCCTCTAGGGAATGGGCTCCCTCAGTTTGCTCCCTTGAAATACCTGCGATTCTTTATTCTCCTGAACCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000653090.1 |
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| CDS GCA 90 bp | AGGAACCACGACAGGAGGAGCTGTGTCACCAAACATTCTGATAGCTaGTCCTTGCTTTTCAGGCATTTCTGTGTAACATCCTACAACTGG | + |
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Preference number: 5 (lower is better) Translates to: RNHDRRSCVTKHSDS*SLLFRHFCVTSYNW Trigger: CCAGTTGTAGGATGTTACACAGAAATGCCTGAAAAGCAAGGAGCAGCTATCAGAATGTTTGGTGACACAGCTCCTCCTGTCGTGGTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000468141.2 ENST00000495449.1 ENST00000653090.1 |
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| CDS GCA 90 bp | CAGAGAATTCTTCACTCCGTGGGTTGTTGTGTCTTCTGTTCACACTaGAGTCTCAAAAGCCTGAGAATAAAGAACAGGCAAAGGGCTGTG | + |
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Preference number: 5 (lower is better) Translates to: QRILHSVGCCVFCSH*SLKSLRIKNRQRAV Trigger: CACAGCCCTTTGCCTGTTCTTTATTCTCAGGCTTTTGAGACTGCAGTGTGAACAGAAGACACAACAACCCACGGAGTGAAGAATTCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468141.2 |
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| CDS GCA 90 bp | AGGAACCACGACAGGAGGAGCTGTGTCACCAAACATTCTGATAGCTaGTCCTTGCTTTTCAGGCATTTCTGTGTAACATCCTGGTATAAA | + |
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Preference number: 5 (lower is better) Translates to: RNHDRRSCVTKHSDS*SLLFRHFCVTSWYK Trigger: TTTATACCAGGATGTTACACAGAAATGCCTGAAAAGCAAGGAGCAGCTATCAGAATGTTTGGTGACACAGCTCCTCCTGTCGTGGTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000422294.4 ENST00000490950.5 |
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| CDS GCA 90 bp | TGTGTCTCTTTTATAAGAGCAGCTCTTGGGAGAGAAGCTGTCCAATaGAACGGAGATTCACAGAGACATATATGGTCCCTCAAGGCTAGA | + |
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Preference number: 5 (lower is better) Translates to: CVSFIRAALGREAVQ*NGDSQRHIWSLKAR Trigger: TCTAGCCTTGAGGGACCATATATGTCTCTGTGAATCTCCGTTGCATTGGACAGCTTCTCTCCCAAGAGCTGCTCTTATAAAAGAGACACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000468141.2 ENST00000490950.5 ENST00000653090.1 |
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| CDS CCA 90 bp | TGTGTATCCCACTGGAAATTTCAAGGCAATGAGTCATCACACTCCTaGTCCCCCTCAAATTCCCGTCTCTTATGTAAGGCTGAGTCATTT | + |
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Preference number: 5 (lower is better) Translates to: CVSHWKFQGNESSHS*SPSNSRLLCKAESF Trigger: AAATGACTCAGCCTTACATAAGAGACGGGAATTTGAGGGGGACCAGGAGTGTGATGACTCATTGCCTTGAAATTTCCAGTGGGATACACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653090.1 |
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| CDS TCA 90 bp | GTGGTCTGTGTATGTGGTTTCAGTCACCTTCCACATAGAAAGCTTTaGCTTCCCCTGAGTTATTTTGAGCAGATGGTTATAGGTGGTTCT | + |
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Preference number: 5 (lower is better) Translates to: VVCVCGFSHLPHRKL*LPLSYFEQMVIGGS Trigger: AGAACCACCTATAACCATCTGCTCAAAATAACTCAGGGGAAGTCAAAGCTTTCTATGTGGAAGGTGACTGAAACCACATACACAGACCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000468141.2 ENST00000490950.5 ENST00000495449.1 ENST00000653090.1 |
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| CDS TCA 90 bp | TCACAGCTCTTTCAAATCAAGGTACTTCCTGGAGACCTCAGGGGCTaGTTCTTGCTATACGAAGTGATTGTATTATTACAGTTCCTGAAA | + |
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Preference number: 5 (lower is better) Translates to: SQLFQIKVLPGDLRG*FLLYEVIVLLQFLK Trigger: TTTCAGGAACTGTAATAATACAATCACTTCGTATAGCAAGAATCAGCCCCTGAGGTCTCCAGGAAGTACCTTGATTTGAAAGAGCTGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653090.1 |
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| CDS CAA 90 bp | GTGAGCCTTTGTCATCCTGCTGTCCCGGCTCAGGACCACTGTCTGTaGTGGGGCCTGAGGACAGGCCAGCCCATGGAGAGGGTGCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: VSLCHPAVPAQDHCL*WGLRTGQPMERVLH Trigger: GTGGAGCACCCTCTCCATGGGCTGGCCTGTCCTCAGGCCCCACAACAGACAGTGGTCCTGAGCCGGGACAGCAGGATGACAAAGGCTCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653090.1 |
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| CDS CCA 72 bp | GTCCTAGGCACACGGCCACACCCATCCCACACTGCCTaGGGAAAGGGATTCCAGTGTCCCCACTGGCAATGG | + |
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Preference number: 6 (lower is better) Translates to: VLGTRPHPSHTA*GKGFQCPHWQW Trigger: CCATTGCCAGTGGGGACACTGGAATCCCTTTCCCCAGGCAGTGTGGGATGGGTGTGGCCGTGTGCCTAGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653090.1 |
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| CDS CAA 90 bp | CTTCCAGCCCAACACCTCATCACCTCCGAGTTAGAGGACCAGGGCTaGAGCGAGGAGGACTGTAGGACCCCGAGGTACCAGCTGACAGGG | + |
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Preference number: 6 (lower is better) Translates to: LPAQHLITSELEDQG*SEEDCRTPRYQLTG Trigger: CCCTGTCAGCTGGTACCTCGGGGTCCTACAGTCCTCCTCGCTCAAGCCCTGGTCCTCTAACTCGGAGGTGATGAGGTGTTGGGCTGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490950.5 |
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| CDS CCA 72 bp | GAGGACTGTAGGACCCCGAGGTACCAGCTGACAGGGTaGCTGATCTCATGGGTCCAGTATGGCCAGGCCTAC | + |
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Preference number: 6 (lower is better) Translates to: EDCRTPRYQLTG*LISWVQYGQAY Trigger: GTAGGCCTGGCCATACTGGACCCATGAGATCAGCCACCCTGTCAGCTGGTACCTCGGGGTCCTACAGTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490950.5 |
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| CDS CAA 72 bp | CAACACCTCATCACCTCCGAGTTAGAGGACCAGGGCTaGAGCGAGGAGGACTGTAGGACCCCGAGGTACCAG | + |
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Preference number: 6 (lower is better) Translates to: QHLITSELEDQG*SEEDCRTPRYQ Trigger: CTGGTACCTCGGGGTCCTACAGTCCTCCTCGCTCAAGCCCTGGTCCTCTAACTCGGAGGTGATGAGGTGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000490950.5 |
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| CDS CAA 90 bp | GCCTGCAGCACCAGAGCAGAAAGCAGACAGCGTGCAGGAGCTTGTTaGAAAGCCACCGTCTACCACGCATCTGCCCAGGCCAATTCAGAG | + |
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Preference number: 6 (lower is better) Translates to: ACSTRAESRQRAGAC*KATVYHASAQANSE Trigger: CTCTGAATTGGCCTGGGCAGATGCGTGGTAGACGGTGGCTTTCAAACAAGCTCCTGCACGCTGTCTGCTTTCTGCTCTGGTGCTGCAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468141.2 |
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| CDS TCA 72 bp | CCAGAGCAGAAAGCAGACAGCGTGCAGGAGCTTGTTTaGAAGCCACCGTCTACCACGCATCTGCCCAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: PEQKADSVQELV*KPPSTTHLPRP Trigger: TGGCCTGGGCAGATGCGTGGTAGACGGTGGCTTTCAAACAAGCTCCTGCACGCTGTCTGCTTTCTGCTCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468141.2 |
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| CDS GCA 72 bp | CCTCTGCCTGAGTTCATCCACCCTCCAGGGGAACACTaGTCTGCATTGCTGGGGCAGCCCAGAGAATTCTTC | + |
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Preference number: 6 (lower is better) Translates to: PLPEFIHPPGEH*SALLGQPREFF Trigger: GAAGAATTCTCTGGGCTGCCCCAGCAATGCAGAGCAGTGTTCCCCTGGAGGGTGGATGAACTCAGGCAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000468141.2 |
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| CDS GCA 72 bp | ACACAGAGCGGAGGGGCACTCCAAGTCAGCAGGAACTaGAACTATCACTGTCCCAGGAAGGCAAGCACGGGA | + |
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Preference number: 6 (lower is better) Translates to: TQSGGALQVSRN*NYHCPRKASTG Trigger: TCCCGTGCTTGCCTTCCTGGGACAGTGATAGTTGCAGTTCCTGCTGACTTGGAGTGCCCCTCCGCTCTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468141.2 |
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| CDS GCA 72 bp | TCAAGGCTAGAGGGTGGCACTGGTGTTTGTGGGCGATaGTTCCAAGTTCAAAGGCTAGCAGGGTGGGGCCCT | + |
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Preference number: 6 (lower is better) Translates to: SRLEGGTGVCGR*FQVQRLAGWGP Trigger: AGGGCCCCACCCTGCTAGCCTTTGAACTTGGAAGCATCGCCCACAAACACCAGTGCCACCCTCTAGCCTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000468141.2 ENST00000490950.5 ENST00000653090.1 |
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| CDS CCA 72 bp | TCATCCACCCTCCAGGGGAACACTGCTCTGCATTGCTaGGGCAGCCCAGAGAATTCTTCACTCCGTGGGTTG | + |
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Preference number: 6 (lower is better) Translates to: SSTLQGNTALHC*GSPENSSLRGL Trigger: CAACCCACGGAGTGAAGAATTCTCTGGGCTGCCCCAGCAATGCAGAGCAGTGTTCCCCTGGAGGGTGGATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468141.2 |
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| CDS CCA 72 bp | TGTGGGCGATGCTTCCAAGTTCAAAGGCTAGCAGGGTaGGGCCCTGTCGAAGAGAGGCTGACAGAGTGTAGC | + |
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Preference number: 6 (lower is better) Translates to: CGRCFQVQRLAG*GPVEERLTECS Trigger: GCTACACTCTGTCAGCCTCTCTTCGACAGGGCCCCACCCTGCTAGCCTTTGAACTTGGAAGCATCGCCCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000468141.2 ENST00000490950.5 ENST00000653090.1 |
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| CDS CAA 72 bp | ACCAGAGCAGAAAGCAGACAGCGTGCAGGAGCTTGTTaGAAAGCCACCGTCTACCACGCATCTGCCCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: TRAESRQRAGAC*KATVYHASAQA Trigger: GGCCTGGGCAGATGCGTGGTAGACGGTGGCTTTCAAACAAGCTCCTGCACGCTGTCTGCTTTCTGCTCTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468141.2 |
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| CDS CAA 72 bp | GAGTTCATCCACCCTCCAGGGGAACACTGCTCTGCATaGCTGGGGCAGCCCAGAGAATTCTTCACTCCGTGG | + |
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Preference number: 6 (lower is better) Translates to: EFIHPPGEHCSA*LGQPREFFTPW Trigger: CCACGGAGTGAAGAATTCTCTGGGCTGCCCCAGCAATGCAGAGCAGTGTTCCCCTGGAGGGTGGATGAACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000468141.2 |
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| CDS CCA 72 bp | TGGTCCCTCAAGGCTAGAGGGTGGCACTGGTGTTTGTaGGCGATGCTTCCAAGTTCAAAGGCTAGCAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: WSLKARGWHWCL*AMLPSSKASRV Trigger: CACCCTGCTAGCCTTTGAACTTGGAAGCATCGCCCACAAACACCAGTGCCACCCTCTAGCCTTGAGGGACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000468141.2 ENST00000490950.5 ENST00000653090.1 |
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| CDS CAA 72 bp | CATGGTCAGCTCCACCTGTGGGTTTCCCCTCTCCTCTaGTACTTTCAGCGGCAGAAAGGTGCACTGAGCGGA | + |
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Preference number: 6 (lower is better) Translates to: HGQLHLWVSPLL*YFQRQKGALSG Trigger: TCCGCTCAGTGCACCTTTCTGCCGCTGAAAGTACAAGAGGAGAGGGGAAACCCACAGGTGGAGCTGACCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422294.4 |
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| CDS CAA 72 bp | CAGCACCAGAGCAGAAAGCAGACAGCGTGCAGGAGCTaGTTTGAAAGCCACCGTCTACCACGCATCTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: QHQSRKQTACRS*FESHRLPRICP Trigger: TGGGCAGATGCGTGGTAGACGGTGGCTTTCAAACAAGCTCCTGCACGCTGTCTGCTTTCTGCTCTGGTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468141.2 |
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| CDS CAA 90 bp | AATTGCCTGCAGCACCAGAGCAGAAAGCAGACAGCGTGCAGGAGCTaGTTTGAAAGCCACCGTCTACCACGCATCTGCCCAGGCCAATTC | + |
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Preference number: 6 (lower is better) Translates to: NCLQHQSRKQTACRS*FESHRLPRICPGQF Trigger: GAATTGGCCTGGGCAGATGCGTGGTAGACGGTGGCTTTCAAACAAGCTCCTGCACGCTGTCTGCTTTCTGCTCTGGTGCTGCAGGCAATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468141.2 |
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| CDS GCA 72 bp | TTTGCTCCAGAGTGCAAATGTGAGCCTTTGTCATCCTaGTGTCCCGGCTCAGGACCACTGTCTGTTGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: FAPECKCEPLSS*CPGSGPLSVVG Trigger: CCCCACAACAGACAGTGGTCCTGAGCCGGGACAGCAGGATGACAAAGGCTCACATTTGCACTCTGGAGCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000653090.1 |
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| CDS CCA 72 bp | CCGAAGATTATCCAAGACAGCCTTCACCAGCTACCCTaGGGTGCAAGGGCAAACCTGATTCCCATTCCCCCT | + |
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Preference number: 6 (lower is better) Translates to: PKIIQDSLHQLP*GARANLIPIPP Trigger: AGGGGGAATGGGAATCAGGTTTGCCCTTGCACCCCAGGGTAGCTGGTGAAGGCTGTCTTGGATAATCTTCGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000468141.2 |
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| CDS CCA 72 bp | ATCATCTGTGACAGTCCTCATGGTCAGCTCCACCTGTaGGTTTCCCCTCTCCTCTTGTACTTTCAGCGGCAG | + |
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Preference number: 6 (lower is better) Translates to: IICDSPHGQLHL*VSPLLLYFQRQ Trigger: CTGCCGCTGAAAGTACAAGAGGAGAGGGGAAACCCACAGGTGGAGCTGACCATGAGGACTGTCACAGATGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422294.4 |
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| CDS CAA 72 bp | ATATGGTCCCTCAAGGCTAGAGGGTGGCACTGGTGTTaGTGGGCGATGCTTCCAAGTTCAAAGGCTAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: IWSLKARGWHWC*WAMLPSSKASR Trigger: CCTGCTAGCCTTTGAACTTGGAAGCATCGCCCACAAACACCAGTGCCACCCTCTAGCCTTGAGGGACCATAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000468141.2 ENST00000490950.5 ENST00000653090.1 |
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| CDS CAA 90 bp | TTTCCATCCGGTGATGTTTTTGCTCCAGAGTGCAAATGTGAGCCTTaGTCATCCTGCTGTCCCGGCTCAGGACCACTGTCTGTTGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: FPSGDVFAPECKCEP*SSCCPGSGPLSVVG Trigger: CCCCACAACAGACAGTGGTCCTGAGCCGGGACAGCAGGATGACAAAGGCTCACATTTGCACTCTGGAGCAAAAACATCACCGGATGGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653090.1 |
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| CDS CCA 72 bp | GTACTTTCAGCGGCAGAAAGGTGCACTGAGCGGACATaGGATTCCACACTGGAGTCCAAGCTCACATGTCTT | + |
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Preference number: 6 (lower is better) Translates to: VLSAAERCTERT*DSTLESKLTCL Trigger: AAGACATGTGAGCTTGGACTCCAGTGTGGAATCCCATGTCCGCTCAGTGCACCTTTCTGCCGCTGAAAGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000422294.4 |
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| CDS CCA 72 bp | GCATTGCTGGGGCAGCCCAGAGAATTCTTCACTCCGTaGGTTGTTGTGTCTTCTGTTCACACTGCAGTCTCA | + |
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Preference number: 6 (lower is better) Translates to: ALLGQPREFFTP*VVVSSVHTAVS Trigger: TGAGACTGCAGTGTGAACAGAAGACACAACAACCCACGGAGTGAAGAATTCTCTGGGCTGCCCCAGCAATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468141.2 |
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| CDS CCA 72 bp | GCAGCTGCTCATCATTGGCTGTACATTGGAATCATCTaGCTGCCTGTCTCTTCCAGCCCAACACCTCATCAC | + |
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Preference number: 6 (lower is better) Translates to: AAAHHWLYIGII*LPVSSSPTPHH Trigger: GTGATGAGGTGTTGGGCTGGAAGAGACAGGCAGCCAGATGATTCCAATGTACAGCCAATGATGAGCAGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490950.5 |
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| CDS CAA 72 bp | GGTGATGTTTTTGCTCCAGAGTGCAAATGTGAGCCTTaGTCATCCTGCTGTCCCGGCTCAGGACCACTGTCT | + |
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Preference number: 6 (lower is better) Translates to: GDVFAPECKCEP*SSCCPGSGPLS Trigger: AGACAGTGGTCCTGAGCCGGGACAGCAGGATGACAAAGGCTCACATTTGCACTCTGGAGCAAAAACATCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000653090.1 |
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| CDS CCA 72 bp | GGACTCACGCAGACTAGAGATGCTCTCTTAAGACCTTaGAGCTCATCCGAAAGGGAACACCTCATGGATCTG | + |
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Preference number: 6 (lower is better) Translates to: GLTQTRDALLRP*SSSEREHLMDL Trigger: CAGATCCATGAGGTGTTCCCTTTCGGATGAGCTCCAAGGTCTTAAGAGAGCATCTCTAGTCTGCGTGAGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000468141.2 ENST00000490950.5 ENST00000495449.1 ENST00000653090.1 |
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| CDS CCA 72 bp | AGACATATATGGTCCCTCAAGGCTAGAGGGTGGCACTaGTGTTTGTGGGCGATGCTTCCAAGTTCAAAGGCT | + |
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Preference number: 6 (lower is better) Translates to: RHIWSLKARGWH*CLWAMLPSSKA Trigger: AGCCTTTGAACTTGGAAGCATCGCCCACAAACACCAGTGCCACCCTCTAGCCTTGAGGGACCATATATGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000468141.2 ENST00000490950.5 ENST00000653090.1 |
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| CDS CCA 72 bp | TCACAGAGACATATATGGTCCCTCAAGGCTAGAGGGTaGCACTGGTGTTTGTGGGCGATGCTTCCAAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: SQRHIWSLKARG*HWCLWAMLPSS Trigger: TGAACTTGGAAGCATCGCCCACAAACACCAGTGCCACCCTCTAGCCTTGAGGGACCATATATGTCTCTGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000468141.2 ENST00000490950.5 ENST00000653090.1 |
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| CDS CAA 72 bp | TGGGGCAGCCCAGAGAATTCTTCACTCCGTGGGTTGTaGTGTCTTCTGTTCACACTGCAGTCTCAAAAGCCT | + |
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Preference number: 6 (lower is better) Translates to: WGSPENSSLRGL*CLLFTLQSQKP Trigger: AGGCTTTTGAGACTGCAGTGTGAACAGAAGACACAACAACCCACGGAGTGAAGAATTCTCTGGGCTGCCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000468141.2 |
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| CDS TCA 72 bp | AGCTGCTCATCATTGGCTGTACATTGGAATCATCTGTaGCAGTCCTCATGGTCAGCTCCACCTGTGGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: SCSSLAVHWNHL*QSSWSAPPVGF Trigger: GAAACCCACAGGTGGAGCTGACCATGAGGACTGTCACAGATGATTCCAATGTACAGCCAATGATGAGCAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000422294.4 |
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| CDS GCA 72 bp | ACTGTCAGACCCCACAGAATCAGGAAGTGCCAGGATTaGAGAGAAGGCATGGAGATCATTTCAATTGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: TVRPHRIRKCQD*REGMEIISIAC Trigger: GCAGGCAATTGAAATGATCTCCATGCCTTCTCTGCAATCCTGGCACTTCCTGATTCTGTGGGGTCTGACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468141.2 |
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| CDS GCA 72 bp | CTGAGTTATTTTGAGCAGATGGTTATAGGTGGTTCTTaGTCAGGACCGTCGTTCAGACGGACTCACGCAGAC | + |
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Preference number: 6 (lower is better) Translates to: LSYFEQMVIGGS*SGPSFRRTHAD Trigger: GTCTGCGTGAGTCCGTCTGAACGACGGTCCTGAGCAAGAACCACCTATAACCATCTGCTCAAAATAACTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000468141.2 ENST00000490950.5 ENST00000495449.1 ENST00000653090.1 |
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| CDS CAA 72 bp | CACTGTCAGACCCCACAGAATCAGGAAGTGCCAGGATaGCAGAGAAGGCATGGAGATCATTTCAATTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: HCQTPQNQEVPG*QRRHGDHFNCL Trigger: CAGGCAATTGAAATGATCTCCATGCCTTCTCTGCAATCCTGGCACTTCCTGATTCTGTGGGGTCTGACAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468141.2 |
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| CDS GCA 72 bp | AAGGGATTTAGAGGCATTCATAATGGACGGAAGGGCTaGATTAGGGAAGATCAGGGAAGTCACTGTCAGACC | + |
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Preference number: 6 (lower is better) Translates to: KGFRGIHNGRKG*IREDQGSHCQT Trigger: GGTCTGACAGTGACTTCCCTGATCTTCCCTAATGCAGCCCTTCCGTCCATTATGAATGCCTCTAAATCCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468141.2 |
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| CDS CAA 90 bp | TGTGTGTGTGTGTGTGTGAGTGAGAGACAGAGAGAGAGAGAGGGATaGATTCACATTATTTGCAGCTTTAGGGGACTGATGGTACCCCTG | + |
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Preference number: 6 (lower is better) Translates to: CVCVCVSERQREREG*IHIICSFRGLMVPL Trigger: CAGGGGTACCATCAGTCCCCTAAAGCTGCAAATAATGTGAATCAATCCCTCTCTCTCTCTCTGTCTCTCACTCACACACACACACACACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000653090.1 |
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| CDS CAA 90 bp | CACGACAGGAGGAGCTGTGTCACCAAACATTCTGATAGCTGCTCCTaGCTTTTCAGGCATTTCTGTGTAACATCCTGGTATAAAATGGCC | + |
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Preference number: 6 (lower is better) Translates to: HDRRSCVTKHSDSCS*LFRHFCVTSWYKMA Trigger: GGCCATTTTATACCAGGATGTTACACAGAAATGCCTGAAAAGCAAGGAGCAGCTATCAGAATGTTTGGTGACACAGCTCCTCCTGTCGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000422294.4 ENST00000490950.5 |
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| CDS TCA 72 bp | GAAAACATGTGTATCCCACTGGAAATTTCAAGGCAATaGGTCATCACACTCCTGGTCCCCCTCAAATTCCCG | + |
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Preference number: 6 (lower is better) Translates to: ENMCIPLEISRQ*VITLLVPLKFP Trigger: CGGGAATTTGAGGGGGACCAGGAGTGTGATGACTCATTGCCTTGAAATTTCCAGTGGGATACACATGTTTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000653090.1 |
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| CDS GCA 72 bp | GACAGGAGGAGCTGTGTCACCAAACATTCTGATAGCTaGTCCTTGCTTTTCAGGCATTTCTGTGTAACATCC | + |
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Preference number: 6 (lower is better) Translates to: DRRSCVTKHSDS*SLLFRHFCVTS Trigger: GGATGTTACACAGAAATGCCTGAAAAGCAAGGAGCAGCTATCAGAATGTTTGGTGACACAGCTCCTCCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000422294.4 ENST00000468141.2 ENST00000490950.5 ENST00000495449.1 ENST00000653090.1 |
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| CDS TCA 72 bp | AGAATAAAGAATCGCAGGTATTTCAAGGGAGCAAACTaGGGGAGCCCATTCCCTAGAGGAATGAGGTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: RIKNRRYFKGAN*GSPFPRGMRLL Trigger: AAGCAACCTCATTCCTCTAGGGAATGGGCTCCCTCAGTTTGCTCCCTTGAAATACCTGCGATTCTTTATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653090.1 |
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| CDS GCA 72 bp | CTTCACTCCGTGGGTTGTTGTGTCTTCTGTTCACACTaGAGTCTCAAAAGCCTGAGAATAAAGAACAGGCAA | + |
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Preference number: 6 (lower is better) Translates to: LHSVGCCVFCSH*SLKSLRIKNRQ Trigger: TTGCCTGTTCTTTATTCTCAGGCTTTTGAGACTGCAGTGTGAACAGAAGACACAACAACCCACGGAGTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468141.2 |
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| CDS GCA 72 bp | TTTATAAGAGCAGCTCTTGGGAGAGAAGCTGTCCAATaGAACGGAGATTCACAGAGACATATATGGTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: FIRAALGREAVQ*NGDSQRHIWSL Trigger: GAGGGACCATATATGTCTCTGTGAATCTCCGTTGCATTGGACAGCTTCTCTCCCAAGAGCTGCTCTTATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000468141.2 ENST00000490950.5 ENST00000653090.1 |
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| CDS CAA 90 bp | CACGACAGGAGGAGCTGTGTCACCAAACATTCTGATAGCTGCTCCTaGCTTTTCAGGCATTTCTGTGTAACATCCTACAACTGGTATAAA | + |
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Preference number: 6 (lower is better) Translates to: HDRRSCVTKHSDSCS*LFRHFCVTSYNWYK Trigger: TTTATACCAGTTGTAGGATGTTACACAGAAATGCCTGAAAAGCAAGGAGCAGCTATCAGAATGTTTGGTGACACAGCTCCTCCTGTCGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000468141.2 ENST00000495449.1 ENST00000653090.1 |
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| CDS CAA 72 bp | AGGAGCTGTGTCACCAAACATTCTGATAGCTGCTCCTaGCTTTTCAGGCATTTCTGTGTAACATCCTGGTAT | + |
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Preference number: 6 (lower is better) Translates to: RSCVTKHSDSCS*LFRHFCVTSWY Trigger: ATACCAGGATGTTACACAGAAATGCCTGAAAAGCAAGGAGCAGCTATCAGAATGTTTGGTGACACAGCTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000422294.4 ENST00000490950.5 |
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| CDS CAA 72 bp | AGGAGCTGTGTCACCAAACATTCTGATAGCTGCTCCTaGCTTTTCAGGCATTTCTGTGTAACATCCTACAAC | + |
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Preference number: 6 (lower is better) Translates to: RSCVTKHSDSCS*LFRHFCVTSYN Trigger: GTTGTAGGATGTTACACAGAAATGCCTGAAAAGCAAGGAGCAGCTATCAGAATGTTTGGTGACACAGCTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000468141.2 ENST00000495449.1 ENST00000653090.1 |
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| CDS CCA 72 bp | TCATTTCCAAGTTCCATAATGTCAGGAATGCTGCAGTaGTCTGTGTATGTGGTTTCAGTCACCTTCCACATA | + |
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Preference number: 6 (lower is better) Translates to: SFPSSIMSGMLQ*SVYVVSVTFHI Trigger: TATGTGGAAGGTGACTGAAACCACATACACAGACCACTGCAGCATTCCTGACATTATGGAACTTGGAAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000468141.2 ENST00000490950.5 ENST00000495449.1 ENST00000653090.1 |
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| CDS CAA 90 bp | TTCCCTAGAGGAATGAGGTTGCTTTTTGGGAGTTTGACCATAAAATaGACACATAGAAATCAAAGCAGACAAAGGCCAAGCCATGCTAAA | + |
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Preference number: 6 (lower is better) Translates to: FPRGMRLLFGSLTIK*THRNQSRQRPSHAK Trigger: TTTAGCATGGCTTGGCCTTTGTCTGCTTTGATTTCTATGTGTCAATTTTATGGTCAAACTCCCAAAAAGCAACCTCATTCCTCTAGGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000653090.1 |
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| CDS TCA 72 bp | GTATGTGGTTTCAGTCACCTTCCACATAGAAAGCTTTaGCTTCCCCTGAGTTATTTTGAGCAGATGGTTATA | + |
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Preference number: 6 (lower is better) Translates to: VCGFSHLPHRKL*LPLSYFEQMVI Trigger: TATAACCATCTGCTCAAAATAACTCAGGGGAAGTCAAAGCTTTCTATGTGGAAGGTGACTGAAACCACATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000468141.2 ENST00000490950.5 ENST00000495449.1 ENST00000653090.1 |
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| CDS TCA 72 bp | TTTCAAATCAAGGTACTTCCTGGAGACCTCAGGGGCTaGTTCTTGCTATACGAAGTGATTGTATTATTACAG | + |
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Preference number: 6 (lower is better) Translates to: FQIKVLPGDLRG*FLLYEVIVLLQ Trigger: CTGTAATAATACAATCACTTCGTATAGCAAGAATCAGCCCCTGAGGTCTCCAGGAAGTACCTTGATTTGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653090.1 |
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