Pregenerated sensors for LINC01118 (Homo sapiens)
Ensembl gene IDs: ENSG00000222005Ensembl transcript IDs: ENST00000409518.1, ENST00000409912.5, ENST00000479311.1, ENST00000650611.1
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCTCTCAGGAAGACAGCACCCATCCCACACTTGCTTGCCAGGCCTTaGCCAGAGGAAGGCAGCCCTGTTCCCGGGTCCCCTATCCCACAT | + |
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Preference number: 5 (lower is better) Translates to: PLRKTAPIPHLLARP*PEEGSPVPGSPIPH Trigger: ATGTGGGATAGGGGACCCGGGAACAGGGCTGCCTTCCTCTGGCCAAGGCCTGGCAAGCAAGTGTGGGATGGGTGCTGTCTTCCTGAGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000409518.1 ENST00000409912.5 ENST00000650611.1 |
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| CDS GCA 90 bp | TTCTATTGTCCCTCTCAGGAAGACAGCACCCATCCCACACTTGCTTaGCAGGCCTTGGCCAGAGGAAGGCAGCCCTGTTCCCGGGTCCCC | + |
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Preference number: 5 (lower is better) Translates to: FYCPSQEDSTHPTLA*QALARGRQPCSRVP Trigger: GGGGACCCGGGAACAGGGCTGCCTTCCTCTGGCCAAGGCCTGGCAAGCAAGTGTGGGATGGGTGCTGTCTTCCTGAGAGGGACAATAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000409518.1 ENST00000409912.5 ENST00000650611.1 |
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| CDS CCA 90 bp | GGCAGAGACAGTGATGGCTGGAACAGACCCTGCACACTACATACATaGGGATCCAGGCCACAGCGGGTGGGGCTTTGCTCTTGGCAGGAC | + |
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Preference number: 5 (lower is better) Translates to: GRDSDGWNRPCTLHT*GSRPQRVGLCSWQD Trigger: GTCCTGCCAAGAGCAAAGCCCCACCCGCTGTGGCCTGGATCCCCATGTATGTAGTGTGCAGGGTCTGTTCCAGCCATCACTGTCTCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479311.1 |
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| CDS CCA 90 bp | GGGACACCAGGCAACCCAATAATGACCACAGGCTGGAATCTGCCATaGTGCCCCACAGCACCAGGCCCCATACAAGCTCAGGCCTGCTCT | + |
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Preference number: 5 (lower is better) Translates to: GTPGNPIMTTGWNLP*CPTAPGPIQAQACS Trigger: AGAGCAGGCCTGAGCTTGTATGGGGCCTGGTGCTGTGGGGCACCATGGCAGATTCCAGCCTGTGGTCATTATTGGGTTGCCTGGTGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479311.1 |
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| CDS TCA 90 bp | TCCCAGAACCCTCCCACAGCCCTACAGGGAGCCAGGCAGAGACAGTaGTGGCTGGAACAGACCCTGCACACTACATACATGGGGATCCAG | + |
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Preference number: 5 (lower is better) Translates to: SQNPPTALQGARQRQ*WLEQTLHTTYMGIQ Trigger: CTGGATCCCCATGTATGTAGTGTGCAGGGTCTGTTCCAGCCATCACTGTCTCTGCCTGGCTCCCTGTAGGGCTGTGGGAGGGTTCTGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479311.1 |
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| CDS GCA 90 bp | TCACTTCTATTGTCCCTCTCAGGAAGACAGCACCCATCCCACACTTaGTTGCCAGGCCTTGGCCAGAGGAAGGCAGCCCTGTTCCCGGGT | + |
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Preference number: 5 (lower is better) Translates to: SLLLSLSGRQHPSHT*LPGLGQRKAALFPG Trigger: ACCCGGGAACAGGGCTGCCTTCCTCTGGCCAAGGCCTGGCAAGCAAGTGTGGGATGGGTGCTGTCTTCCTGAGAGGGACAATAGAAGTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000409518.1 ENST00000409912.5 ENST00000650611.1 |
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| CDS GCA 90 bp | ACACCAGGCAACCCAATAATGACCACAGGCTGGAATCTGCCATGGTaGCCCACAGCACCAGGCCCCATACAAGCTCAGGCCTGCTCTGCT | + |
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Preference number: 5 (lower is better) Translates to: TPGNPIMTTGWNLPW*PTAPGPIQAQACSA Trigger: AGCAGAGCAGGCCTGAGCTTGTATGGGGCCTGGTGCTGTGGGGCACCATGGCAGATTCCAGCCTGTGGTCATTATTGGGTTGCCTGGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479311.1 |
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| CDS CCA 90 bp | GGGTCCATCGCTGTGCCTGGCGCTGCAGAGCCTCCCCAGCAAAGGTaGGCTCAGAACTTGCCCACTGCACAACTCCAGGAACACTATTTA | + |
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Preference number: 5 (lower is better) Translates to: GSIAVPGAAEPPQQR*AQNLPTAQLQEHYL Trigger: TAAATAGTGTTCCTGGAGTTGTGCAGTGGGCAAGTTCTGAGCCCACCTTTGCTGGGGAGGCTCTGCAGCGCCAGGCACAGCGATGGACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650611.1 |
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| CDS CCA 90 bp | CCTCTCACCCTCACCTGTGACAGTCCTCATGGTCAGCTCCACCTGTaGGTTTCCCCTCTCCTCTTGTACTTTCAGCGGCAGAAAGGTGCA | + |
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Preference number: 5 (lower is better) Translates to: PLTLTCDSPHGQLHL*VSPLLLYFQRQKGA Trigger: TGCACCTTTCTGCCGCTGAAAGTACAAGAGGAGAGGGGAAACCCACAGGTGGAGCTGACCATGAGGACTGTCACAGGTGAGGGTGAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479311.1 |
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| CDS GCA 90 bp | CCTGTGGGTTTCCCCTCTCCTCTTGTACTTTCAGCGGCAGAAAGGTaGACTGAGCGGACATGGGATTCCACACTGGAGTCCAAGCTCACA | + |
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Preference number: 5 (lower is better) Translates to: PVGFPSPLVLSAAER*TERTWDSTLESKLT Trigger: TGTGAGCTTGGACTCCAGTGTGGAATCCCATGTCCGCTCAGTGCACCTTTCTGCCGCTGAAAGTACAAGAGGAGAGGGGAAACCCACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000409518.1 ENST00000409912.5 ENST00000479311.1 ENST00000650611.1 |
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| CDS CCA 90 bp | TTTGCCTCTCAAAGCTGTGACAGTCCTCATGGTCAGCTCCACCTGTaGGTTTCCCCTCTCCTCTTGTACTTTCAGCGGCAGAAAGGTGCA | + |
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Preference number: 5 (lower is better) Translates to: FASQSCDSPHGQLHL*VSPLLLYFQRQKGA Trigger: TGCACCTTTCTGCCGCTGAAAGTACAAGAGGAGAGGGGAAACCCACAGGTGGAGCTGACCATGAGGACTGTCACAGCTTTGAGAGGCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409912.5 |
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| CDS CCA 90 bp | AAGGTCACGGAACTGGTTTATGGATTGCAGAGTCAGGACTTGACCTaGGTTCTGATGCTCCCAATACACCCCAGGCTGCCACATTTGCCC | + |
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Preference number: 5 (lower is better) Translates to: KVTELVYGLQSQDLT*VLMLPIHPRLPHLP Trigger: GGGCAAATGTGGCAGCCTGGGGTGTATTGGGAGCATCAGAACCCAGGTCAAGTCCTGACTCTGCAATCCATAAACCAGTTCCGTGACCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479311.1 |
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| CDS CCA 90 bp | AGCTCAGGAGGGGCGTGTTCAATTTCCTTCCTCACCTTGCAGGCTTaGTGGGATTGTTCCAGGAAAGAATCTCACATCCTGGGTCCATCG | + |
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Preference number: 5 (lower is better) Translates to: SSGGACSISFLTLQA*WDCSRKESHILGPS Trigger: CGATGGACCCAGGATGTGAGATTCTTTCCTGGAACAATCCCACCAAGCCTGCAAGGTGAGGAAGGAAATTGAACACGCCCCTCCTGAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650611.1 |
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| CDS TCA 90 bp | CGTTTTAGAATCACCCCTCCTCATCAGGGAGCTTTCTCTTGTGTCTaGTCTCAGTCCTCGCTGCTGGAACTGAAGTCCTGCTCCATGCTG | + |
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Preference number: 5 (lower is better) Translates to: RFRITPPHQGAFSCV*SQSSLLELKSCSML Trigger: CAGCATGGAGCAGGACTTCAGTTCCAGCAGCGAGGACTGAGATCAGACACAAGAGAAAGCTCCCTGATGAGGAGGGGTGATTCTAAAACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000409518.1 ENST00000409912.5 ENST00000650611.1 |
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| CDS TCA 90 bp | GAGAGAAGCAATTACGCACAGATGGGTAAGAGAGCCCAGGGATGCTaGGTGACATGCTTTTGGTCACCCAGGAAGTTGAAAGGCAGAGCC | + |
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Preference number: 5 (lower is better) Translates to: ERSNYAQMGKRAQGC*VTCFWSPRKLKGRA Trigger: GGCTCTGCCTTTCAACTTCCTGGGTGACCAAAAGCATGTCACTCAGCATCCCTGGGCTCTCTTACCCATCTGTGCGTAATTGCTTCTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650611.1 |
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| CDS GCA 90 bp | ACCAGGCCCCATACAAGCTCAGGCCTGCTCTGCTCAGAACTTCTCTaGTTTAGGACTTGGTGGTTTTCCATGTGCTTTACCTGGGATCAC | + |
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Preference number: 5 (lower is better) Translates to: TRPHTSSGLLCSELL*FRTWWFSMCFTWDH Trigger: GTGATCCCAGGTAAAGCACATGGAAAACCACCAAGTCCTAAAGCAGAGAAGTTCTGAGCAGAGCAGGCCTGAGCTTGTATGGGGCCTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479311.1 |
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| CDS CCA 90 bp | ATTCAAAGAGTTCCCTGTGACAGTCCTCATGGTCAGCTCCACCTGTaGGTTTCCCCTCTCCTCTTGTACTTTCAGCGGCAGAAAGGTGCA | + |
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Preference number: 5 (lower is better) Translates to: IQRVPCDSPHGQLHL*VSPLLLYFQRQKGA Trigger: TGCACCTTTCTGCCGCTGAAAGTACAAGAGGAGAGGGGAAACCCACAGGTGGAGCTGACCATGAGGACTGTCACAGGGAACTCTTTGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000409518.1 ENST00000650611.1 |
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| CDS GCA 90 bp | AGTGCTAGGATTATAGGTGTGAGCCTGGCCGACTTACTCAATTATTaGAGCCTCCAAAGCTTGGCTCAAGTCCACTGCCTCCAGGAAGAT | + |
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Preference number: 5 (lower is better) Translates to: SARIIGVSLADLLNY*SLQSLAQVHCLQED Trigger: ATCTTCCTGGAGGCAGTGGACTTGAGCCAAGCTTTGGAGGCTGCAATAATTGAGTAAGTCGGCCAGGCTCACACCTATAATCCTAGCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479311.1 |
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| CDS CCA 90 bp | GAACTTCTCTGCTTTAGGACTTGGTGGTTTTCCATGTGCTTTACCTaGGATCACCAGATATGGGGGAATCTCTTAACTCCCAGGGAGACG | + |
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Preference number: 5 (lower is better) Translates to: ELLCFRTWWFSMCFT*DHQIWGNLLTPRET Trigger: CGTCTCCCTGGGAGTTAAGAGATTCCCCCATATCTGGTGATCCCAGGTAAAGCACATGGAAAACCACCAAGTCCTAAAGCAGAGAAGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000479311.1 |
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| CDS TCA 90 bp | TGGTCACCCAGGAAGTTGAAAGGCAGAGCCAGGTGTCTCATCTGTTaGCCTCTCCTTGTTATTCCTCTCATGGTTGAAAGTGAGCATTTC | + |
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Preference number: 5 (lower is better) Translates to: WSPRKLKGRARCLIC*PLLVIPLMVESEHF Trigger: GAAATGCTCACTTTCAACCATGAGAGGAATAACAAGGAGAGGTCAACAGATGAGACACCTGGCTCTGCCTTTCAACTTCCTGGGTGACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650611.1 |
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| CDS GCA 90 bp | CTCTGCTCAGAACTTCTCTGCTTTAGGACTTGGTGGTTTTCCATGTaGTTTACCTGGGATCACCAGATATGGGGGAATCTCTTAACTCCC | + |
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Preference number: 5 (lower is better) Translates to: LCSELLCFRTWWFSM*FTWDHQIWGNLLTP Trigger: GGGAGTTAAGAGATTCCCCCATATCTGGTGATCCCAGGTAAAGCACATGGAAAACCACCAAGTCCTAAAGCAGAGAAGTTCTGAGCAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000479311.1 |
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| CDS GCA 90 bp | GACTTACTCAATTATTGCAGCCTCCAAAGCTTGGCTCAAGTCCACTaGCTCCAGGAAGATGTCTCTGACTACACAAGTCTGAACCAAGTT | + |
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Preference number: 5 (lower is better) Translates to: DLLNYCSLQSLAQVH*LQEDVSDYTSLNQV Trigger: AACTTGGTTCAGACTTGTGTAGTCAGAGACATCTTCCTGGAGGCAGTGGACTTGAGCCAAGCTTTGGAGGCTGCAATAATTGAGTAAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479311.1 |
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| CDS CCA 90 bp | GTGGCTTTAAATAGGAAGCATAAGTGTTTCAACCTCACCCTGGGCTaGAACTGCAGGCATGATCTGGTGTCCTCTTATTCAAAGAGTTCC | + |
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Preference number: 5 (lower is better) Translates to: VALNRKHKCFNLTLG*NCRHDLVSSYSKSS Trigger: GGAACTCTTTGAATAAGAGGACACCAGATCATGCCTGCAGTTCCAGCCCAGGGTGAGGTTGAAACACTTATGCTTCCTATTTAAAGCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479311.1 |
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| CDS TCA 90 bp | TTAGAGACTGATATTATAAGATCTCACACCACCTCTGCAGGGTCTTaGATTAGGGGGCTCTGTCACTTCTATTGTCCCTCTCAGGAAGAC | + |
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Preference number: 5 (lower is better) Translates to: LETDIIRSHTTSAGS*IRGLCHFYCPSQED Trigger: GTCTTCCTGAGAGGGACAATAGAAGTGACAGAGCCCCCTAATTCAAGACCCTGCAGAGGTGGTGTGAGATCTTATAATATCAGTCTCTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000409518.1 ENST00000409912.5 ENST00000650611.1 |
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| CDS TCA 90 bp | GATCACCAGATATGGGGGAATCTCTTAACTCCCAGGGAGACGGTTTaGGAAGAGATCTTTGTTATTCTCACCACACTGGTGAGGAAACTA | + |
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Preference number: 5 (lower is better) Translates to: DHQIWGNLLTPRETV*EEIFVILTTLVRKL Trigger: TAGTTTCCTCACCAGTGTGGTGAGAATAACAAAGATCTCTTCTCAAACCGTCTCCCTGGGAGTTAAGAGATTCCCCCATATCTGGTGATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000479311.1 |
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| CDS GCA 90 bp | TTAAATAGGAAGCATAAGTGTTTCAACCTCACCCTGGGCTGGAACTaGAGGCATGATCTGGTGTCCTCTTATTCAAAGAGTTCCCTGAGA | + |
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Preference number: 5 (lower is better) Translates to: LNRKHKCFNLTLGWN*RHDLVSSYSKSSLR Trigger: TCTCAGGGAACTCTTTGAATAAGAGGACACCAGATCATGCCTGCAGTTCCAGCCCAGGGTGAGGTTGAAACACTTATGCTTCCTATTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479311.1 |
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| CDS CCA 72 bp | AAGACAGCACCCATCCCACACTTGCTTGCCAGGCCTTaGCCAGAGGAAGGCAGCCCTGTTCCCGGGTCCCCT | + |
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Preference number: 6 (lower is better) Translates to: KTAPIPHLLARP*PEEGSPVPGSP Trigger: AGGGGACCCGGGAACAGGGCTGCCTTCCTCTGGCCAAGGCCTGGCAAGCAAGTGTGGGATGGGTGCTGTCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000409518.1 ENST00000409912.5 ENST00000650611.1 |
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| CDS GCA 72 bp | CCCTCTCAGGAAGACAGCACCCATCCCACACTTGCTTaGCAGGCCTTGGCCAGAGGAAGGCAGCCCTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: PSQEDSTHPTLA*QALARGRQPCS Trigger: GGAACAGGGCTGCCTTCCTCTGGCCAAGGCCTGGCAAGCAAGTGTGGGATGGGTGCTGTCTTCCTGAGAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000409518.1 ENST00000409912.5 ENST00000650611.1 |
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| CDS CAA 90 bp | CTTCTATTGTCCCTCTCAGGAAGACAGCACCCATCCCACACTTGCTaGCCAGGCCTTGGCCAGAGGAAGGCAGCCCTGTTCCCGGGTCCC | + |
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Preference number: 6 (lower is better) Translates to: LLLSLSGRQHPSHTC*PGLGQRKAALFPGP Trigger: GGGACCCGGGAACAGGGCTGCCTTCCTCTGGCCAAGGCCTGGCAAGCAAGTGTGGGATGGGTGCTGTCTTCCTGAGAGGGACAATAGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000409518.1 ENST00000409912.5 ENST00000650611.1 |
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| CDS GCA 72 bp | GTCTCGCTCTGTCACAGGCTCGCCTTGTCTTGTCTCTaGTCCCTCACTAGCTGTCATCTGGCCCCAGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: VSLCHRLALSCL*SLTSCHLAPAS Trigger: GGAGGCTGGGGCCAGATGACAGCTAGTGAGGGAGCAGAGACAAGACAAGGCGAGCCTGTGACAGAGCGAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000409518.1 ENST00000409912.5 ENST00000479311.1 ENST00000650611.1 |
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| CDS GCA 72 bp | TTGTCCCTCTCAGGAAGACAGCACCCATCCCACACTTaGTTGCCAGGCCTTGGCCAGAGGAAGGCAGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: LSLSGRQHPSHT*LPGLGQRKAAL Trigger: CAGGGCTGCCTTCCTCTGGCCAAGGCCTGGCAAGCAAGTGTGGGATGGGTGCTGTCTTCCTGAGAGGGACAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000409518.1 ENST00000409912.5 ENST00000650611.1 |
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| CDS CAA 90 bp | GTCACTTCTATTGTCCCTCTCAGGAAGACAGCACCCATCCCACACTaGCTTGCCAGGCCTTGGCCAGAGGAAGGCAGCCCTGTTCCCGGG | + |
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Preference number: 6 (lower is better) Translates to: VTSIVPLRKTAPIPH*LARPWPEEGSPVPG Trigger: CCCGGGAACAGGGCTGCCTTCCTCTGGCCAAGGCCTGGCAAGCAAGTGTGGGATGGGTGCTGTCTTCCTGAGAGGGACAATAGAAGTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000409518.1 ENST00000409912.5 ENST00000650611.1 |
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| CDS CAA 72 bp | ATTGTCCCTCTCAGGAAGACAGCACCCATCCCACACTaGCTTGCCAGGCCTTGGCCAGAGGAAGGCAGCCCT | + |
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Preference number: 6 (lower is better) Translates to: IVPLRKTAPIPH*LARPWPEEGSP Trigger: AGGGCTGCCTTCCTCTGGCCAAGGCCTGGCAAGCAAGTGTGGGATGGGTGCTGTCTTCCTGAGAGGGACAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000409518.1 ENST00000409912.5 ENST00000650611.1 |
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| CDS CCA 72 bp | GGCAACCCAATAATGACCACAGGCTGGAATCTGCCATaGTGCCCCACAGCACCAGGCCCCATACAAGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: GNPIMTTGWNLP*CPTAPGPIQAQ Trigger: CTGAGCTTGTATGGGGCCTGGTGCTGTGGGGCACCATGGCAGATTCCAGCCTGTGGTCATTATTGGGTTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479311.1 |
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| CDS CCA 72 bp | CTCACCTGTGACAGTCCTCATGGTCAGCTCCACCTGTaGGTTTCCCCTCTCCTCTTGTACTTTCAGCGGCAG | + |
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Preference number: 6 (lower is better) Translates to: LTCDSPHGQLHL*VSPLLLYFQRQ Trigger: CTGCCGCTGAAAGTACAAGAGGAGAGGGGAAACCCACAGGTGGAGCTGACCATGAGGACTGTCACAGGTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479311.1 |
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| CDS CAA 72 bp | ACATACATGGGGATCCAGGCCACAGCGGGTGGGGCTTaGCTCTTGGCAGGACAAACAGTCCTGGTTCCGAAA | + |
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Preference number: 6 (lower is better) Translates to: TYMGIQATAGGA*LLAGQTVLVPK Trigger: TTTCGGAACCAGGACTGTTTGTCCTGCCAAGAGCAAAGCCCCACCCGCTGTGGCCTGGATCCCCATGTATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479311.1 |
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| CDS CAA 90 bp | GACAGTCCTCATGGTCAGCTCCACCTGTGGGTTTCCCCTCTCCTCTaGTACTTTCAGCGGCAGAAAGGTGCACTGAGCGGACATGGGATT | + |
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Preference number: 6 (lower is better) Translates to: DSPHGQLHLWVSPLL*YFQRQKGALSGHGI Trigger: AATCCCATGTCCGCTCAGTGCACCTTTCTGCCGCTGAAAGTACAAGAGGAGAGGGGAAACCCACAGGTGGAGCTGACCATGAGGACTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000409518.1 ENST00000409912.5 ENST00000479311.1 ENST00000650611.1 |
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| CDS GCA 72 bp | TTCCCCTCTCCTCTTGTACTTTCAGCGGCAGAAAGGTaGACTGAGCGGACATGGGATTCCACACTGGAGTCC | + |
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Preference number: 6 (lower is better) Translates to: FPSPLVLSAAER*TERTWDSTLES Trigger: GGACTCCAGTGTGGAATCCCATGTCCGCTCAGTGCACCTTTCTGCCGCTGAAAGTACAAGAGGAGAGGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000409518.1 ENST00000409912.5 ENST00000479311.1 ENST00000650611.1 |
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| CDS CCA 72 bp | CAAAGCTGTGACAGTCCTCATGGTCAGCTCCACCTGTaGGTTTCCCCTCTCCTCTTGTACTTTCAGCGGCAG | + |
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Preference number: 6 (lower is better) Translates to: QSCDSPHGQLHL*VSPLLLYFQRQ Trigger: CTGCCGCTGAAAGTACAAGAGGAGAGGGGAAACCCACAGGTGGAGCTGACCATGAGGACTGTCACAGCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000409912.5 |
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| CDS TCA 72 bp | CTCTCCTCTTGTACTTTCAGCGGCAGAAAGGTGCACTaGGCGGACATGGGATTCCACACTGGAGTCCAAGCT | + |
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Preference number: 6 (lower is better) Translates to: LSSCTFSGRKVH*ADMGFHTGVQA Trigger: AGCTTGGACTCCAGTGTGGAATCCCATGTCCGCTCAGTGCACCTTTCTGCCGCTGAAAGTACAAGAGGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000409518.1 ENST00000409912.5 ENST00000479311.1 ENST00000650611.1 |
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| CDS GCA 72 bp | CACAGCACCAGGCCCCATACAAGCTCAGGCCTGCTCTaGTCAGAACTTCTCTGCTTTAGGACTTGGTGGTTT | + |
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Preference number: 6 (lower is better) Translates to: HSTRPHTSSGLL*SELLCFRTWWF Trigger: AAACCACCAAGTCCTAAAGCAGAGAAGTTCTGAGCAGAGCAGGCCTGAGCTTGTATGGGGCCTGGTGCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479311.1 |
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| CDS GCA 72 bp | GCCTCCCCAGCAAAGGTGGGCTCAGAACTTGCCCACTaGACAACTCCAGGAACACTATTTACCCTGCTGTTA | + |
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Preference number: 6 (lower is better) Translates to: ASPAKVGSELAH*TTPGTLFTLLL Trigger: TAACAGCAGGGTAAATAGTGTTCCTGGAGTTGTGCAGTGGGCAAGTTCTGAGCCCACCTTTGCTGGGGAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650611.1 |
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| CDS CAA 90 bp | GAGCTCAGGAGGGGCGTGTTCAATTTCCTTCCTCACCTTGCAGGCTaGGTGGGATTGTTCCAGGAAAGAATCTCACATCCTGGGTCCATC | + |
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Preference number: 6 (lower is better) Translates to: ELRRGVFNFLPHLAG*VGLFQERISHPGSI Trigger: GATGGACCCAGGATGTGAGATTCTTTCCTGGAACAATCCCACCAAGCCTGCAAGGTGAGGAAGGAAATTGAACACGCCCCTCCTGAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650611.1 |
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| CDS CAA 90 bp | CACCTGAGGAGCTCAGGAGGGGCGTGTTCAATTTCCTTCCTCACCTaGCAGGCTTGGTGGGATTGTTCCAGGAAAGAATCTCACATCCTG | + |
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Preference number: 6 (lower is better) Translates to: HLRSSGGACSISFLT*QAWWDCSRKESHIL Trigger: CAGGATGTGAGATTCTTTCCTGGAACAATCCCACCAAGCCTGCAAGGTGAGGAAGGAAATTGAACACGCCCCTCCTGAGCTCCTCAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650611.1 |
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| CDS CAA 72 bp | GTCACGGAACTGGTTTATGGATTGCAGAGTCAGGACTaGACCTGGGTTCTGATGCTCCCAATACACCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: VTELVYGLQSQD*TWVLMLPIHPR Trigger: CCTGGGGTGTATTGGGAGCATCAGAACCCAGGTCAAGTCCTGACTCTGCAATCCATAAACCAGTTCCGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479311.1 |
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| CDS CAA 72 bp | AAGGACCTGGGCAAGGTCACGGAACTGGTTTATGGATaGCAGAGTCAGGACTTGACCTGGGTTCTGATGCTC | + |
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Preference number: 6 (lower is better) Translates to: KDLGKVTELVYG*QSQDLTWVLML Trigger: GAGCATCAGAACCCAGGTCAAGTCCTGACTCTGCAATCCATAAACCAGTTCCGTGACCTTGCCCAGGTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479311.1 |
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| CDS TCA 72 bp | GTGTTTCAACCTCACCCTGGGCTGGAACTGCAGGCATaGTCTGGTGTCCTCTTATTCAAAGAGTTCCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: VFQPHPGLELQA*SGVLLFKEFPE Trigger: CTCAGGGAACTCTTTGAATAAGAGGACACCAGATCATGCCTGCAGTTCCAGCCCAGGGTGAGGTTGAAACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479311.1 |
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| CDS TCA 72 bp | GCCATTGTATGCTTGCAACACCGTAAGACTAGGTGCTaGCCTGCTGTAATCTCAGCTACTCAGGAGGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: AIVCLQHRKTRC*PAVISATQEAE Trigger: CTCAGCCTCCTGAGTAGCTGAGATTACAGCAGGTCAGCACCTAGTCTTACGGTGTTGCAAGCATACAATGGC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650611.1 |
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| CDS CCA 72 bp | AAGGAAGGACCTGGGCAAGGTCACGGAACTGGTTTATaGATTGCAGAGTCAGGACTTGACCTGGGTTCTGAT | + |
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Preference number: 6 (lower is better) Translates to: KEGPGQGHGTGL*IAESGLDLGSD Trigger: ATCAGAACCCAGGTCAAGTCCTGACTCTGCAATCCATAAACCAGTTCCGTGACCTTGCCCAGGTCCTTCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479311.1 |
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| CDS CCA 72 bp | GGCCTGCTCTGCTCAGAACTTCTCTGCTTTAGGACTTaGTGGTTTTCCATGTGCTTTACCTGGGATCACCAG | + |
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Preference number: 6 (lower is better) Translates to: GLLCSELLCFRT*WFSMCFTWDHQ Trigger: CTGGTGATCCCAGGTAAAGCACATGGAAAACCACCAAGTCCTAAAGCAGAGAAGTTCTGAGCAGAGCAGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479311.1 |
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| CDS CCA 72 bp | TGGCCGACTTACTCAATTATTGCAGCCTCCAAAGCTTaGCTCAAGTCCACTGCCTCCAGGAAGATGTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: WPTYSIIAASKA*LKSTASRKMSL Trigger: CAGAGACATCTTCCTGGAGGCAGTGGACTTGAGCCAAGCTTTGGAGGCTGCAATAATTGAGTAAGTCGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479311.1 |
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| CDS CAA 72 bp | AACTCCAGGAACACTATTTACCCTGCTGTTAGCTATTaGAGTCTCTCCCCGGCTTCCCAAGGGCAAGGTCTG | + |
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Preference number: 6 (lower is better) Translates to: NSRNTIYPAVSY*SLSPASQGQGL Trigger: CAGACCTTGCCCTTGGGAAGCCGGGGAGAGACTCAAATAGCTAACAGCAGGGTAAATAGTGTTCCTGGAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650611.1 |
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| CDS CAA 72 bp | AGCTCAGGAGGGGCGTGTTCAATTTCCTTCCTCACCTaGCAGGCTTGGTGGGATTGTTCCAGGAAAGAATCT | + |
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Preference number: 6 (lower is better) Translates to: SSGGACSISFLT*QAWWDCSRKES Trigger: AGATTCTTTCCTGGAACAATCCCACCAAGCCTGCAAGGTGAGGAAGGAAATTGAACACGCCCCTCCTGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650611.1 |
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| CDS TCA 72 bp | CTTGGCTCAAGTCCACTGCCTCCAGGAAGATGTCTCTaGCTACACAAGTCTGAACCAAGTTCTCAGCCTGAA | + |
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Preference number: 6 (lower is better) Translates to: LGSSPLPPGRCL*LHKSEPSSQPE Trigger: TTCAGGCTGAGAACTTGGTTCAGACTTGTGTAGTCAGAGACATCTTCCTGGAGGCAGTGGACTTGAGCCAAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479311.1 |
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| CDS CAA 72 bp | AGGGGCGTGTTCAATTTCCTTCCTCACCTTGCAGGCTaGGTGGGATTGTTCCAGGAAAGAATCTCACATCCT | + |
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Preference number: 6 (lower is better) Translates to: RGVFNFLPHLAG*VGLFQERISHP Trigger: AGGATGTGAGATTCTTTCCTGGAACAATCCCACCAAGCCTGCAAGGTGAGGAAGGAAATTGAACACGCCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650611.1 |
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| CDS CAA 90 bp | TCTCTCCCCGGCTTCCCAAGGGCAAGGTCTGAATCACTTTTATACTaGCAGTCCCAGGAGCTGATGCAGAGAGTAAATCATCAATACAGC | + |
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Preference number: 6 (lower is better) Translates to: SLPGFPRARSESLLY*QSQELMQRVNHQYS Trigger: GCTGTATTGATGATTTACTCTCTGCATCAGCTCCTGGGACTGCAAGTATAAAAGTGATTCAGACCTTGCCCTTGGGAAGCCGGGGAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000650611.1 |
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| CDS TCA 72 bp | CACCAAAGAGAGCTTGAGAGGCACTGGCTTAGAGACTaGTATTATAAGATCTCACACCACCTCTGCAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: HQRELERHWLRD*YYKISHHLCRV Trigger: GACCCTGCAGAGGTGGTGTGAGATCTTATAATATCAGTCTCTAAGCCAGTGCCTCTCAAGCTCTCTTTGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000409518.1 ENST00000409912.5 ENST00000650611.1 |
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| CDS TCA 72 bp | AATTACGCACAGATGGGTAAGAGAGCCCAGGGATGCTaGGTGACATGCTTTTGGTCACCCAGGAAGTTGAAA | + |
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Preference number: 6 (lower is better) Translates to: NYAQMGKRAQGC*VTCFWSPRKLK Trigger: TTTCAACTTCCTGGGTGACCAAAAGCATGTCACTCAGCATCCCTGGGCTCTCTTACCCATCTGTGCGTAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650611.1 |
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| CDS GCA 72 bp | CATACAAGCTCAGGCCTGCTCTGCTCAGAACTTCTCTaGTTTAGGACTTGGTGGTTTTCCATGTGCTTTACC | + |
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Preference number: 6 (lower is better) Translates to: HTSSGLLCSELL*FRTWWFSMCFT Trigger: GGTAAAGCACATGGAAAACCACCAAGTCCTAAAGCAGAGAAGTTCTGAGCAGAGCAGGCCTGAGCTTGTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479311.1 |
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| CDS GCA 72 bp | GAACTTCTCTGCTTTAGGACTTGGTGGTTTTCCATGTaGTTTACCTGGGATCACCAGATATGGGGGAATCTC | + |
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Preference number: 6 (lower is better) Translates to: ELLCFRTWWFSM*FTWDHQIWGNL Trigger: GAGATTCCCCCATATCTGGTGATCCCAGGTAAAGCACATGGAAAACCACCAAGTCCTAAAGCAGAGAAGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000479311.1 |
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| CDS CCA 72 bp | AATAGGAAGCATAAGTGTTTCAACCTCACCCTGGGCTaGAACTGCAGGCATGATCTGGTGTCCTCTTATTCA | + |
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Preference number: 6 (lower is better) Translates to: NRKHKCFNLTLG*NCRHDLVSSYS Trigger: TGAATAAGAGGACACCAGATCATGCCTGCAGTTCCAGCCCAGGGTGAGGTTGAAACACTTATGCTTCCTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479311.1 |
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| CDS CCA 72 bp | TGCTTTAGGACTTGGTGGTTTTCCATGTGCTTTACCTaGGATCACCAGATATGGGGGAATCTCTTAACTCCC | + |
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Preference number: 6 (lower is better) Translates to: CFRTWWFSMCFT*DHQIWGNLLTP Trigger: GGGAGTTAAGAGATTCCCCCATATCTGGTGATCCCAGGTAAAGCACATGGAAAACCACCAAGTCCTAAAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000479311.1 |
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| CDS CCA 72 bp | CTGCTCTGCTCAGAACTTCTCTGCTTTAGGACTTGGTaGTTTTCCATGTGCTTTACCTGGGATCACCAGATA | + |
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Preference number: 6 (lower is better) Translates to: LLCSELLCFRTW*FSMCFTWDHQI Trigger: TATCTGGTGATCCCAGGTAAAGCACATGGAAAACCACCAAGTCCTAAAGCAGAGAAGTTCTGAGCAGAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479311.1 |
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| CDS CAA 72 bp | GGCTTCCCAAGGGCAAGGTCTGAATCACTTTTATACTaGCAGTCCCAGGAGCTGATGCAGAGAGTAAATCAT | + |
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Preference number: 6 (lower is better) Translates to: GFPRARSESLLY*QSQELMQRVNH Trigger: ATGATTTACTCTCTGCATCAGCTCCTGGGACTGCAAGTATAAAAGTGATTCAGACCTTGCCCTTGGGAAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650611.1 |
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| CDS TCA 72 bp | GATATTATAAGATCTCACACCACCTCTGCAGGGTCTTaGATTAGGGGGCTCTGTCACTTCTATTGTCCCTCT | + |
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Preference number: 6 (lower is better) Translates to: DIIRSHTTSAGS*IRGLCHFYCPS Trigger: AGAGGGACAATAGAAGTGACAGAGCCCCCTAATTCAAGACCCTGCAGAGGTGGTGTGAGATCTTATAATATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000409518.1 ENST00000409912.5 ENST00000650611.1 |
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| CDS TCA 72 bp | AGGAAGTTGAAAGGCAGAGCCAGGTGTCTCATCTGTTaGCCTCTCCTTGTTATTCCTCTCATGGTTGAAAGT | + |
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Preference number: 6 (lower is better) Translates to: RKLKGRARCLIC*PLLVIPLMVES Trigger: ACTTTCAACCATGAGAGGAATAACAAGGAGAGGTCAACAGATGAGACACCTGGCTCTGCCTTTCAACTTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000650611.1 |
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| CDS CAA 90 bp | TCTGACTACACAAGTCTGAACCAAGTTCTCAGCCTGAAGGGGTTATaGTCCACACTTAGTGATATAAGGCTGTTTTCCATCAGCGCTAGA | + |
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Preference number: 6 (lower is better) Translates to: SDYTSLNQVLSLKGL*STLSDIRLFSISAR Trigger: TCTAGCGCTGATGGAAAACAGCCTTATATCACTAAGTGTGGACAATAACCCCTTCAGGCTGAGAACTTGGTTCAGACTTGTGTAGTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479311.1 |
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| CDS CAA 72 bp | ACAAGTCTGAACCAAGTTCTCAGCCTGAAGGGGTTATaGTCCACACTTAGTGATATAAGGCTGTTTTCCATC | + |
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Preference number: 6 (lower is better) Translates to: TSLNQVLSLKGL*STLSDIRLFSI Trigger: GATGGAAAACAGCCTTATATCACTAAGTGTGGACAATAACCCCTTCAGGCTGAGAACTTGGTTCAGACTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479311.1 |
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| CDS CAA 72 bp | TCAGCATTTAACAAGCTCATCCAAAACTTTGTGCCATaGTATGCTTGCAACACCGTAAGACTAGGTGCTGAC | + |
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Preference number: 6 (lower is better) Translates to: SAFNKLIQNFVP*YACNTVRLGAD Trigger: GTCAGCACCTAGTCTTACGGTGTTGCAAGCATACAATGGCACAAAGTTTTGGATGAGCTTGTTAAATGCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000650611.1 |
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