Pregenerated sensors for LINC01114 (Homo sapiens)
Ensembl gene IDs: ENSG00000234177Ensembl transcript IDs: ENST00000421071.1, ENST00000424321.5, ENST00000425879.1
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TGCGTTCTCCGGCACAGGCCCCTCCATGGAGCCGGCAGTCGGCTATaGAGCCAGGGGACGCAGATCCACAGCTCTCGGGCTGATTCAGGA | + |
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Preference number: 5 (lower is better) Translates to: CVLRHRPLHGAGSRL*SQGTQIHSSRADSG Trigger: TCCTGAATCAGCCCGAGAGCTGTGGATCTGCGTCCCCTGGCTGCATAGCCGACTGCCGGCTCCATGGAGGGGCCTGTGCCGGAGAACGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000424321.5 ENST00000425879.1 |
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| CDS GCA 90 bp | AGCCAGGGGACGCAGATCCACAGCTCTCGGGCTGATTCAGGACTGTaGAAGCACCGCAGAAGCCAGGGAGCTGGTGTCCTGGGCATCCTG | + |
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Preference number: 5 (lower is better) Translates to: SQGTQIHSSRADSGL*KHRRSQGAGVLGIL Trigger: CAGGATGCCCAGGACACCAGCTCCCTGGCTTCTGCGGTGCTTGCACAGTCCTGAATCAGCCCGAGAGCTGTGGATCTGCGTCCCCTGGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000424321.5 ENST00000425879.1 |
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| CDS GCA 90 bp | GGCCTCCAGGGGAGAGAAGTCGCCAGAGAGCCTCTGTTTGCTTCCTaGCACTGCCCACAGCCAGCCCTGCAGCAGCGTTTTTGGCTCCCT | + |
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Preference number: 5 (lower is better) Translates to: GLQGREVAREPLFAS*HCPQPALQQRFWLP Trigger: AGGGAGCCAAAAACGCTGCTGCAGGGCTGGCTGTGGGCAGTGGCAGGAAGCAAACAGAGGCTCTCTGGCGACTTCTCTCCCCTGGAGGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000424321.5 |
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| CDS TCA 90 bp | CAGTCGGCTATGCAGCCAGGGGACGCAGATCCACAGCTCTCGGGCTaGTTCAGGACTGTGCAAGCACCGCAGAAGCCAGGGAGCTGGTGT | + |
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Preference number: 5 (lower is better) Translates to: QSAMQPGDADPQLSG*FRTVQAPQKPGSWC Trigger: ACACCAGCTCCCTGGCTTCTGCGGTGCTTGCACAGTCCTGAATCAGCCCGAGAGCTGTGGATCTGCGTCCCCTGGCTGCATAGCCGACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000424321.5 ENST00000425879.1 |
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| CDS TCA 90 bp | AAGCCTCGCTCAGATCTGGGCACGTGGCACAGGAAAAAGCGCCGCTaGGCGGATCTAAAGAACAGCGGGTGTCGGGGAGCCGGAAAGCAG | + |
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Preference number: 5 (lower is better) Translates to: KPRSDLGTWHRKKRR*ADLKNSGCRGAGKQ Trigger: CTGCTTTCCGGCTCCCCGACACCCGCTGTTCTTTAGATCCGCTCAGCGGCGCTTTTTCCTGTGCCACGTGCCCAGATCTGAGCGAGGCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000424321.5 |
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| CDS GCA 90 bp | GCCACATTGCGGAACAGGCAGGCCCGGCTGTGGCACAGTCTGAAATaGCCAGGCACAGCACGACTGCTAAATTCTCGCACTCCCTGGACT | + |
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Preference number: 5 (lower is better) Translates to: ATLRNRQARLWHSLK*PGTARLLNSRTPWT Trigger: AGTCCAGGGAGTGCGAGAATTTAGCAGTCGTGCTGTGCCTGGGCATTTCAGACTGTGCCACAGCCGGGCCTGCCTGTTCCGCAATGTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000424321.5 |
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| CDS CCA 90 bp | GAAGAAATAAGTCAACATGTGCGTTCTCCGGCACAGGCCCCTCCATaGAGCCGGCAGTCGGCTATGCAGCCAGGGGACGCAGATCCACAG | + |
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Preference number: 5 (lower is better) Translates to: EEISQHVRSPAQAPP*SRQSAMQPGDADPQ Trigger: CTGTGGATCTGCGTCCCCTGGCTGCATAGCCGACTGCCGGCTCCATGGAGGGGCCTGTGCCGGAGAACGCACATGTTGACTTATTTCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000424321.5 ENST00000425879.1 |
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| CDS CCA 90 bp | TGGCTCCCTTCCTCAGCCACATTGCGGAACAGGCAGGCCCGGCTGTaGCACAGTCTGAAATGCCCAGGCACAGCACGACTGCTAAATTCT | + |
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Preference number: 5 (lower is better) Translates to: WLPSSATLRNRQARL*HSLKCPGTARLLNS Trigger: AGAATTTAGCAGTCGTGCTGTGCCTGGGCATTTCAGACTGTGCCACAGCCGGGCCTGCCTGTTCCGCAATGTGGCTGAGGAAGGGAGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000424321.5 |
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| CDS GCA 90 bp | CCTGGGCATCCTGGCAGTTCTTTTCACGTTGGCGCAAATGAGCAATaGGCACGAAGCTGCTCCATCTCCTCTGCTGCGATTTCGCTGCCG | + |
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Preference number: 5 (lower is better) Translates to: PGHPGSSFHVGANEQ*ARSCSISSAAISLP Trigger: CGGCAGCGAAATCGCAGCAGAGGAGATGGAGCAGCTTCGTGCGCATTGCTCATTTGCGCCAACGTGAAAAGAACTGCCAGGATGCCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000424321.5 ENST00000425879.1 |
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| CDS TCA 90 bp | CTTTGCCTGTGCCTGGAGCTTGCTCTCTGCGGGAGAACCTGGAGCTaGTCTCCAGAATACAGCTTCTCTCGGCCTTTTAAACCAGGGCCC | + |
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Preference number: 5 (lower is better) Translates to: LCLCLELALCGRTWS*SPEYSFSRPFKPGP Trigger: GGGCCCTGGTTTAAAAGGCCGAGAGAAGCTGTATTCTGGAGATCAGCTCCAGGTTCTCCCGCAGAGAGCAAGCTCCAGGCACAGGCAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000424321.5 |
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| CDS GCA 90 bp | GGCAGTTCTTTTCACGTTGGCGCAAATGAGCAATGCGCACGAAGCTaGTCCATCTCCTCTGCTGCGATTTCGCTGCCGAAGAGCCGAGGA | + |
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Preference number: 5 (lower is better) Translates to: GSSFHVGANEQCARS*SISSAAISLPKSRG Trigger: TCCTCGGCTCTTCGGCAGCGAAATCGCAGCAGAGGAGATGGAGCAGCTTCGTGCGCATTGCTCATTTGCGCCAACGTGAAAAGAACTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000424321.5 ENST00000425879.1 |
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| CDS GCA 90 bp | AGGACAGAGCTTGGCACTAGGAGGTGCTCACCAAGTACTGAAGAATaGCTGAATGCCCTAGGCAGAGGAGGTGTCGCATATGCCAGCCCC | + |
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Preference number: 5 (lower is better) Translates to: RTELGTRRCSPSTEE*LNALGRGGVAYASP Trigger: GGGGCTGGCATATGCGACACCTCCTCTGCCTAGGGCATTCAGGCATTCTTCAGTACTTGGTGAGCACCTCCTAGTGCCAAGCTCTGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000424321.5 |
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| CDS CCA 90 bp | TGGACTCAGCTCAGCCCCACACCGCTCATTCTTACTCTCCAGTTCTaGGGACAGATTTTACAGCCCGTTCGCGTCTTCCCAAGCCTCGCT | + |
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Preference number: 5 (lower is better) Translates to: WTQLSPTPLILTLQF*GQILQPVRVFPSLA Trigger: AGCGAGGCTTGGGAAGACGCGAACGGGCTGTAAAATCTGTCCCCAGAACTGGAGAGTAAGAATGAGCGGTGTGGGGCTGAGCTGAGTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000424321.5 |
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| CDS CCA 90 bp | GCAAGATCCTCGCTCTTCTCTGAAGCCACACCCTTTGCCTGTGCCTaGAGCTTGCTCTCTGCGGGAGAACCTGGAGCTGATCTCCAGAAT | + |
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Preference number: 5 (lower is better) Translates to: ARSSLFSEATPFACA*SLLSAGEPGADLQN Trigger: ATTCTGGAGATCAGCTCCAGGTTCTCCCGCAGAGAGCAAGCTCCAGGCACAGGCAAAGGGTGTGGCTTCAGAGAAGAGCGAGGATCTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000424321.5 |
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| CDS TCA 90 bp | CTGGTGTCCTGGGCATCCTGGCAGTTCTTTTCACGTTGGCGCAAATaGGCAATGCGCACGAAGCTGCTCCATCTCCTCTGCTGCGATTTC | + |
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Preference number: 5 (lower is better) Translates to: LVSWASWQFFSRWRK*AMRTKLLHLLCCDF Trigger: GAAATCGCAGCAGAGGAGATGGAGCAGCTTCGTGCGCATTGCTCATTTGCGCCAACGTGAAAAGAACTGCCAGGATGCCCAGGACACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000424321.5 ENST00000425879.1 |
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| CDS TCA 90 bp | TCTGCACCAACCTGTAAAAGAGATGGCAAGATCCTCGCTCTTCTCTaGAGCCACACCCTTTGCCTGTGCCTGGAGCTTGCTCTCTGCGGG | + |
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Preference number: 5 (lower is better) Translates to: SAPTCKRDGKILALL*SHTLCLCLELALCG Trigger: CCCGCAGAGAGCAAGCTCCAGGCACAGGCAAAGGGTGTGGCTTCAGAGAAGAGCGAGGATCTTGCCATCTCTTTTACAGGTTGGTGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000424321.5 |
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| CDS CCA 90 bp | CCGGTGATCTGTCCACGAGCTGTGCAGTTTGTCCCACTGATGATGTaGGTGAAGGATGAAGCCAGGGCTCACCCTTCTAAGGGGGACATT | + |
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Preference number: 5 (lower is better) Translates to: PVICPRAVQFVPLMM*VKDEARAHPSKGDI Trigger: AATGTCCCCCTTAGAAGGGTGAGCCCTGGCTTCATCCTTCACCCACATCATCAGTGGGACAAACTGCACAGCTCGTGGACAGATCACCGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000425879.1 |
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| CDS CCA 90 bp | CTGAAATGCCCAGGCACAGCACGACTGCTAAATTCTCGCACTCCCTaGACTCAGCTCAGCCCCACACCGCTCATTCTTACTCTCCAGTTC | + |
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Preference number: 5 (lower is better) Translates to: LKCPGTARLLNSRTP*TQLSPTPLILTLQF Trigger: GAACTGGAGAGTAAGAATGAGCGGTGTGGGGCTGAGCTGAGTCCAGGGAGTGCGAGAATTTAGCAGTCGTGCTGTGCCTGGGCATTTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000424321.5 |
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| CDS TCA 90 bp | ACTGCCAGAGCCCAACAGCAGCCTTGGTCTCAGCACAGGTGGATGTaGTTTTCTTTACCGGTGATCTGTCCACGAGCTGTGCAGTTTGTC | + |
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Preference number: 5 (lower is better) Translates to: TARAQQQPWSQHRWM*FSLPVICPRAVQFV Trigger: GACAAACTGCACAGCTCGTGGACAGATCACCGGTAAAGAAAATCACATCCACCTGTGCTGAGACCAAGGCTGCTGTTGGGCTCTGGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425879.1 |
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| CDS GCA 90 bp | AAAGCACTTGACAGTCCCCAGACCAGGTCCTGCCCCCGCACAAAGTaGTCAGTGCAGGTTGATTGTAAAGTACTGAGGGAGCATCTGGTA | + |
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Preference number: 5 (lower is better) Translates to: KALDSPQTRSCPRTK*SVQVDCKVLREHLV Trigger: TACCAGATGCTCCCTCAGTACTTTACAATCAACCTGCACTGAGCACTTTGTGCGGGGGCAGGACCTGGTCTGGGGACTGTCAAGTGCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000424321.5 |
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| CDS CCA 90 bp | CATTTAGAAAGAGCCCGTGAACTCAGCCCTGGCCCTCTCTCTACCTaGTACCTCTTCCTTGAGCTTCCCCAAAACTCACACTCCTTTGCC | + |
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Preference number: 5 (lower is better) Translates to: HLERARELSPGPLST*YLFLELPQNSHSFA Trigger: GGCAAAGGAGTGTGAGTTTTGGGGAAGCTCAAGGAAGAGGTACCAGGTAGAGAGAGGGCCAGGGCTGAGTTCACGGGCTCTTTCTAAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000421071.1 ENST00000424321.5 ENST00000425879.1 |
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| CDS GCA 90 bp | TCCTTTTGTTCTTTTACTACAACCGGAGTGGTAAATACTACCTACTaGCAACAAACACGGGCATCCACTCTGTCTTCAATGCCTCTTCCG | + |
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Preference number: 5 (lower is better) Translates to: SFCSFTTTGVVNTTY*QQTRASTLSSMPLP Trigger: CGGAAGAGGCATTGAAGACAGAGTGGATGCCCGTGTTTGTTGGCAGTAGGTAGTATTTACCACTCCGGTTGTAGTAAAAGAACAAAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000424321.5 ENST00000425879.1 |
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| CDS TCA 90 bp | TCAGCATTGTCGCTGTTGTTGTTTACTATGGAATGTCACCATGCTTaGATCTTAAGCAGACGGGCTTGGGCTCCATTCATAATTTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: SALSLLLFTMECHHA*ILSRRAWAPFIIFL Trigger: CAGGAAAATTATGAATGGAGCCCAAGCCCGTCTGCTTAAGATTCAAGCATGGTGACATTCCATAGTAAACAACAACAGCGACAATGCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425879.1 |
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| CDS GCA 90 bp | TTTGTCAGCATTGTCGCTGTTGTTGTTTACTATGGAATGTCACCATaGTTGAATCTTAAGCAGACGGGCTTGGGCTCCATTCATAATTTT | + |
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Preference number: 5 (lower is better) Translates to: FVSIVAVVVYYGMSP*LNLKQTGLGSIHNF Trigger: AAAATTATGAATGGAGCCCAAGCCCGTCTGCTTAAGATTCAAGCATGGTGACATTCCATAGTAAACAACAACAGCGACAATGCTGACAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425879.1 |
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| CDS TCA 90 bp | TGCAAAATATGCTGTGCGCTTTCACTCCAGATTTCTTTCTTAGGATaGATGGCTCTGCACATACACGGGAACAAGATCTTATTCTTTTCA | + |
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Preference number: 5 (lower is better) Translates to: CKICCALSLQISFLG*MALHIHGNKILFFS Trigger: TGAAAAGAATAAGATCTTGTTCCCGTGTATGTGCAGAGCCATTCATCCTAAGAAAGAAATCTGGAGTGAAAGCGCACAGCATATTTTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000425879.1 |
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| CDS CCA 72 bp | AGTCAACATGTGCGTTCTCCGGCACAGGCCCCTCCATaGAGCCGGCAGTCGGCTATGCAGCCAGGGGACGCA | + |
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Preference number: 6 (lower is better) Translates to: SQHVRSPAQAPP*SRQSAMQPGDA Trigger: TGCGTCCCCTGGCTGCATAGCCGACTGCCGGCTCCATGGAGGGGCCTGTGCCGGAGAACGCACATGTTGACT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000424321.5 ENST00000425879.1 |
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| CDS CCA 72 bp | CAGCCCGTTCGCGTCTTCCCAAGCCTCGCTCAGATCTaGGCACGTGGCACAGGAAAAAGCGCCGCTGAGCGG | + |
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Preference number: 6 (lower is better) Translates to: QPVRVFPSLAQI*ARGTGKSAAER Trigger: CCGCTCAGCGGCGCTTTTTCCTGTGCCACGTGCCCAGATCTGAGCGAGGCTTGGGAAGACGCGAACGGGCTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000424321.5 |
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| CDS CAA 90 bp | CAGCCAGCCCTGCAGCAGCGTTTTTGGCTCCCTTCCTCAGCCACATaGCGGAACAGGCAGGCCCGGCTGTGGCACAGTCTGAAATGCCCA | + |
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Preference number: 6 (lower is better) Translates to: QPALQQRFWLPSSAT*RNRQARLWHSLKCP Trigger: TGGGCATTTCAGACTGTGCCACAGCCGGGCCTGCCTGTTCCGCAATGTGGCTGAGGAAGGGAGCCAAAAACGCTGCTGCAGGGCTGGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000424321.5 |
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| CDS CCA 72 bp | TCCTCAGCCACATTGCGGAACAGGCAGGCCCGGCTGTaGCACAGTCTGAAATGCCCAGGCACAGCACGACTG | + |
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Preference number: 6 (lower is better) Translates to: SSATLRNRQARL*HSLKCPGTARL Trigger: CAGTCGTGCTGTGCCTGGGCATTTCAGACTGTGCCACAGCCGGGCCTGCCTGTTCCGCAATGTGGCTGAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000424321.5 |
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| CDS CAA 72 bp | CTGCAGCAGCGTTTTTGGCTCCCTTCCTCAGCCACATaGCGGAACAGGCAGGCCCGGCTGTGGCACAGTCTG | + |
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Preference number: 6 (lower is better) Translates to: LQQRFWLPSSAT*RNRQARLWHSL Trigger: CAGACTGTGCCACAGCCGGGCCTGCCTGTTCCGCAATGTGGCTGAGGAAGGGAGCCAAAAACGCTGCTGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000424321.5 |
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| CDS TCA 72 bp | TCAGATCTGGGCACGTGGCACAGGAAAAAGCGCCGCTaGGCGGATCTAAAGAACAGCGGGTGTCGGGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: SDLGTWHRKKRR*ADLKNSGCRGA Trigger: GGCTCCCCGACACCCGCTGTTCTTTAGATCCGCTCAGCGGCGCTTTTTCCTGTGCCACGTGCCCAGATCTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000424321.5 |
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| CDS GCA 72 bp | ACGCAGATCCACAGCTCTCGGGCTGATTCAGGACTGTaGAAGCACCGCAGAAGCCAGGGAGCTGGTGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: TQIHSSRADSGL*KHRRSQGAGVL Trigger: CAGGACACCAGCTCCCTGGCTTCTGCGGTGCTTGCACAGTCCTGAATCAGCCCGAGAGCTGTGGATCTGCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000424321.5 ENST00000425879.1 |
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| CDS GCA 72 bp | CGGAACAGGCAGGCCCGGCTGTGGCACAGTCTGAAATaGCCAGGCACAGCACGACTGCTAAATTCTCGCACT | + |
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Preference number: 6 (lower is better) Translates to: RNRQARLWHSLK*PGTARLLNSRT Trigger: AGTGCGAGAATTTAGCAGTCGTGCTGTGCCTGGGCATTTCAGACTGTGCCACAGCCGGGCCTGCCTGTTCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000424321.5 |
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| CDS GCA 72 bp | ATGCCTGAATGCCCTAGGCAGAGGAGGTGTCGCATATaGCAGCCCCAGGGCACTGATGGGAGAGCCACAGAA | + |
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Preference number: 6 (lower is better) Translates to: MPECPRQRRCRI*QPQGTDGRATE Trigger: TTCTGTGGCTCTCCCATCAGTGCCCTGGGGCTGGCATATGCGACACCTCCTCTGCCTAGGGCATTCAGGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000424321.5 |
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| CDS GCA 72 bp | GGAGGAGGAGCCCCTTGCTCACAAACCAGGACCTGCTaGCTGCCTAGAAGGGCTCTAGCAAGAGACGAAACC | + |
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Preference number: 6 (lower is better) Translates to: GGGAPCSQTRTC*LPRRALARDET Trigger: GGTTTCGTCTCTTGCTAGAGCCCTTCTAGGCAGGCAGCAGGTCCTGGTTTGTGAGCAAGGGGCTCCTCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000424321.5 |
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| CDS CAA 90 bp | AGCCAGGGAGCTGGTGTCCTGGGCATCCTGGCAGTTCTTTTCACGTaGGCGCAAATGAGCAATGCGCACGAAGCTGCTCCATCTCCTCTG | + |
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Preference number: 6 (lower is better) Translates to: SQGAGVLGILAVLFT*AQMSNAHEAAPSPL Trigger: CAGAGGAGATGGAGCAGCTTCGTGCGCATTGCTCATTTGCGCCAACGTGAAAAGAACTGCCAGGATGCCCAGGACACCAGCTCCCTGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000424321.5 ENST00000425879.1 |
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| CDS CAA 72 bp | TTCTCTGAAGCCACACCCTTTGCCTGTGCCTGGAGCTaGCTCTCTGCGGGAGAACCTGGAGCTGATCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: FSEATPFACAWS*LSAGEPGADLQ Trigger: CTGGAGATCAGCTCCAGGTTCTCCCGCAGAGAGCAAGCTCCAGGCACAGGCAAAGGGTGTGGCTTCAGAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000424321.5 |
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| CDS CAA 90 bp | TCCTCGCTCTTCTCTGAAGCCACACCCTTTGCCTGTGCCTGGAGCTaGCTCTCTGCGGGAGAACCTGGAGCTGATCTCCAGAATACAGCT | + |
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Preference number: 6 (lower is better) Translates to: SSLFSEATPFACAWS*LSAGEPGADLQNTA Trigger: AGCTGTATTCTGGAGATCAGCTCCAGGTTCTCCCGCAGAGAGCAAGCTCCAGGCACAGGCAAAGGGTGTGGCTTCAGAGAAGAGCGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000424321.5 |
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| CDS GCA 72 bp | GACAGTCCCCAGACCAGGTCCTGCCCCCGCACAAAGTaGTCAGTGCAGGTTGATTGTAAAGTACTGAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: DSPQTRSCPRTK*SVQVDCKVLRE Trigger: CTCCCTCAGTACTTTACAATCAACCTGCACTGAGCACTTTGTGCGGGGGCAGGACCTGGTCTGGGGACTGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000424321.5 |
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| CDS CCA 72 bp | CCAGGCACAGCACGACTGCTAAATTCTCGCACTCCCTaGACTCAGCTCAGCCCCACACCGCTCATTCTTACT | + |
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Preference number: 6 (lower is better) Translates to: PGTARLLNSRTP*TQLSPTPLILT Trigger: AGTAAGAATGAGCGGTGTGGGGCTGAGCTGAGTCCAGGGAGTGCGAGAATTTAGCAGTCGTGCTGTGCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000424321.5 |
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| CDS CAA 72 bp | GCTGGTGTCCTGGGCATCCTGGCAGTTCTTTTCACGTaGGCGCAAATGAGCAATGCGCACGAAGCTGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: AGVLGILAVLFT*AQMSNAHEAAP Trigger: TGGAGCAGCTTCGTGCGCATTGCTCATTTGCGCCAACGTGAAAAGAACTGCCAGGATGCCCAGGACACCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000424321.5 ENST00000425879.1 |
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| CDS TCA 72 bp | TGGGCATCCTGGCAGTTCTTTTCACGTTGGCGCAAATaGGCAATGCGCACGAAGCTGCTCCATCTCCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: WASWQFFSRWRK*AMRTKLLHLLC Trigger: GCAGAGGAGATGGAGCAGCTTCGTGCGCATTGCTCATTTGCGCCAACGTGAAAAGAACTGCCAGGATGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000424321.5 ENST00000425879.1 |
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| CDS GCA 72 bp | TTTCACGTTGGCGCAAATGAGCAATGCGCACGAAGCTaGTCCATCTCCTCTGCTGCGATTTCGCTGCCGAAG | + |
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Preference number: 6 (lower is better) Translates to: FHVGANEQCARS*SISSAAISLPK Trigger: CTTCGGCAGCGAAATCGCAGCAGAGGAGATGGAGCAGCTTCGTGCGCATTGCTCATTTGCGCCAACGTGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000424321.5 ENST00000425879.1 |
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| CDS CCA 72 bp | CTCAGCCCCACACCGCTCATTCTTACTCTCCAGTTCTaGGGACAGATTTTACAGCCCGTTCGCGTCTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: LSPTPLILTLQF*GQILQPVRVFP Trigger: TGGGAAGACGCGAACGGGCTGTAAAATCTGTCCCCAGAACTGGAGAGTAAGAATGAGCGGTGTGGGGCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000424321.5 |
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| CDS CAA 90 bp | AAGGGGACCTTAGCGCTTGCCAACTGCCAGAGCCCAACAGCAGCCTaGGTCTCAGCACAGGTGGATGTGATTTTCTTTACCGGTGATCTG | + |
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Preference number: 6 (lower is better) Translates to: KGTLALANCQSPTAA*VSAQVDVIFFTGDL Trigger: CAGATCACCGGTAAAGAAAATCACATCCACCTGTGCTGAGACCAAGGCTGCTGTTGGGCTCTGGCAGTTGGCAAGCGCTAAGGTCCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000425879.1 |
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| CDS GCA 72 bp | CCTGGCAGTTCTTTTCACGTTGGCGCAAATGAGCAATaGGCACGAAGCTGCTCCATCTCCTCTGCTGCGATT | + |
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Preference number: 6 (lower is better) Translates to: PGSSFHVGANEQ*ARSCSISSAAI Trigger: AATCGCAGCAGAGGAGATGGAGCAGCTTCGTGCGCATTGCTCATTTGCGCCAACGTGAAAAGAACTGCCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000424321.5 ENST00000425879.1 |
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| CDS GCA 72 bp | CTTGGCACTAGGAGGTGCTCACCAAGTACTGAAGAATaGCTGAATGCCCTAGGCAGAGGAGGTGTCGCATAT | + |
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Preference number: 6 (lower is better) Translates to: LGTRRCSPSTEE*LNALGRGGVAY Trigger: ATATGCGACACCTCCTCTGCCTAGGGCATTCAGGCATTCTTCAGTACTTGGTGAGCACCTCCTAGTGCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000424321.5 |
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| CDS GCA 72 bp | TCTCCTGTGACCAGGACAGAGCTTGGCACTAGGAGGTaGTCACCAAGTACTGAAGAATGCCTGAATGCCCTA | + |
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Preference number: 6 (lower is better) Translates to: SPVTRTELGTRR*SPSTEECLNAL Trigger: TAGGGCATTCAGGCATTCTTCAGTACTTGGTGAGCACCTCCTAGTGCCAAGCTCTGTCCTGGTCACAGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000424321.5 |
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| CDS CAA 72 bp | TTAGCGCTTGCCAACTGCCAGAGCCCAACAGCAGCCTaGGTCTCAGCACAGGTGGATGTGATTTTCTTTACC | + |
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Preference number: 6 (lower is better) Translates to: LALANCQSPTAA*VSAQVDVIFFT Trigger: GGTAAAGAAAATCACATCCACCTGTGCTGAGACCAAGGCTGCTGTTGGGCTCTGGCAGTTGGCAAGCGCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425879.1 |
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| CDS GCA 72 bp | CAGAGTTCAAAAACCACACTCACCCATGACCAGCTGTaGGACCAGGAACCAGCCTTTTTACCTGAGTCCCAA | + |
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Preference number: 6 (lower is better) Translates to: QSSKTTLTHDQL*DQEPAFLPESQ Trigger: TTGGGACTCAGGTAAAAAGGCTGGTTCCTGGTCGCACAGCTGGTCATGGGTGAGTGTGGTTTTTGAACTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000421071.1 ENST00000424321.5 |
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| CDS TCA 72 bp | TTATATGGGGTGAAGTTCTGGCTCATATGCAGGAGCTaGTGGAAACAGAGTCCTAGTGGCCAAATACATCCT | + |
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Preference number: 6 (lower is better) Translates to: LYGVKFWLICRS*WKQSPSGQIHP Trigger: AGGATGTATTTGGCCACTAGGACTCTGTTTCCATCAGCTCCTGCATATGAGCCAGAACTTCACCCCATATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425879.1 |
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| CDS TCA 72 bp | TGCTGTGCGCTTTCACTCCAGATTTCTTTCTTAGGATaGATGGCTCTGCACATACACGGGAACAAGATCTTA | + |
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Preference number: 6 (lower is better) Translates to: CCALSLQISFLG*MALHIHGNKIL Trigger: TAAGATCTTGTTCCCGTGTATGTGCAGAGCCATTCATCCTAAGAAAGAAATCTGGAGTGAAAGCGCACAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425879.1 |
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| CDS TCA 72 bp | TCGCTGTTGTTGTTTACTATGGAATGTCACCATGCTTaGATCTTAAGCAGACGGGCTTGGGCTCCATTCATA | + |
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Preference number: 6 (lower is better) Translates to: SLLLFTMECHHA*ILSRRAWAPFI Trigger: TATGAATGGAGCCCAAGCCCGTCTGCTTAAGATTCAAGCATGGTGACATTCCATAGTAAACAACAACAGCGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425879.1 |
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| CDS GCA 72 bp | ATTGTCGCTGTTGTTGTTTACTATGGAATGTCACCATaGTTGAATCTTAAGCAGACGGGCTTGGGCTCCATT | + |
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Preference number: 6 (lower is better) Translates to: IVAVVVYYGMSP*LNLKQTGLGSI Trigger: AATGGAGCCCAAGCCCGTCTGCTTAAGATTCAAGCATGGTGACATTCCATAGTAAACAACAACAGCGACAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425879.1 |
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| CDS GCA 72 bp | TCTTTTACTACAACCGGAGTGGTAAATACTACCTACTaGCAACAAACACGGGCATCCACTCTGTCTTCAATG | + |
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Preference number: 6 (lower is better) Translates to: SFTTTGVVNTTY*QQTRASTLSSM Trigger: CATTGAAGACAGAGTGGATGCCCGTGTTTGTTGGCAGTAGGTAGTATTTACCACTCCGGTTGTAGTAAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000424321.5 ENST00000425879.1 |
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| CDS CCA 72 bp | TTATTCCATAGGCTAATTCCCTGCGCATTAGTTATATaGGGTGAAGTTCTGGCTCATATGCAGGAGCTGATG | + |
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Preference number: 6 (lower is better) Translates to: LFHRLIPCALVI*GEVLAHMQELM Trigger: CATCAGCTCCTGCATATGAGCCAGAACTTCACCCCATATAACTAATGCGCAGGGAATTAGCCTATGGAATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425879.1 |
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| CDS CAA 90 bp | GTCAGCATTGTCGCTGTTGTTGTTTACTATGGAATGTCACCATGCTaGAATCTTAAGCAGACGGGCTTGGGCTCCATTCATAATTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: VSIVAVVVYYGMSPC*NLKQTGLGSIHNFP Trigger: AGGAAAATTATGAATGGAGCCCAAGCCCGTCTGCTTAAGATTCAAGCATGGTGACATTCCATAGTAAACAACAACAGCGACAATGCTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425879.1 |
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| CDS TCA 72 bp | AAATTCTCTAGAGTTCTTCCTGCAAGTGGTTCTGTGTaGCTCAAAGGCAGACAACAGCTGAATGTGAGACAT | + |
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Preference number: 6 (lower is better) Translates to: KFSRVLPASGSV*LKGRQQLNVRH Trigger: ATGTCTCACATTCAGCTGTTGTCTGCCTTTGAGTCACACAGAACCACTTGCAGGAAGAACTCTAGAGAATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000421071.1 ENST00000424321.5 ENST00000425879.1 |
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| CDS CAA 90 bp | TCCACATTTAAGGGTGGAATCACCCTCACAATAAACGTGTTGTTTTaGTCAGCATTGTCGCTGTTGTTGTTTACTATGGAATGTCACCAT | + |
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Preference number: 6 (lower is better) Translates to: STFKGGITLTINVLF*SALSLLLFTMECHH Trigger: ATGGTGACATTCCATAGTAAACAACAACAGCGACAATGCTGACAAAAACAACACGTTTATTGTGAGGGTGATTCCACCCTTAAATGTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425879.1 |
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| CDS GCA 72 bp | TTTGCCTGGATCCTTTTACAGAACCTATGCAAAATATaGTGTGCGCTTTCACTCCAGATTTCTTTCTTAGGA | + |
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Preference number: 6 (lower is better) Translates to: FAWILLQNLCKI*CALSLQISFLG Trigger: TCCTAAGAAAGAAATCTGGAGTGAAAGCGCACAGCATATTTTGCATAGGTTCTGTAAAAGGATCCAGGCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000425879.1 |
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| CDS CAA 72 bp | AAGGGTGGAATCACCCTCACAATAAACGTGTTGTTTTaGTCAGCATTGTCGCTGTTGTTGTTTACTATGGAA | + |
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Preference number: 6 (lower is better) Translates to: KGGITLTINVLF*SALSLLLFTME Trigger: TTCCATAGTAAACAACAACAGCGACAATGCTGACAAAAACAACACGTTTATTGTGAGGGTGATTCCACCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000425879.1 |
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| CDS CAA 72 bp | TCCTGTCTCTTCCACAATAAGGCTCAATTGATTGGTTaGGCTATGTTAGGAATGTTGGACATAGGTATACTG | + |
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Preference number: 6 (lower is better) Translates to: SCLFHNKAQLIG*AMLGMLDIGIL Trigger: CAGTATACCTATGTCCAACATTCCTAACATAGCCAAACCAATCAATTGAGCCTTATTGTGGAAGAGACAGGA 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425879.1 |
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| CDS CAA 90 bp | GATCACATTTCCTGTCTCTTCCACAATAAGGCTCAATTGATTGGTTaGGCTATGTTAGGAATGTTGGACATAGGTATACTGGTTACAGAA | + |
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Preference number: 6 (lower is better) Translates to: DHISCLFHNKAQLIG*AMLGMLDIGILVTE Trigger: TTCTGTAACCAGTATACCTATGTCCAACATTCCTAACATAGCCAAACCAATCAATTGAGCCTTATTGTGGAAGAGACAGGAAATGTGATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425879.1 |
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| CDS CAA 90 bp | CATTCAAGTGATCACATTTCCTGTCTCTTCCACAATAAGGCTCAATaGATTGGTTTGGCTATGTTAGGAATGTTGGACATAGGTATACTG | + |
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Preference number: 6 (lower is better) Translates to: HSSDHISCLFHNKAQ*IGLAMLGMLDIGIL Trigger: CAGTATACCTATGTCCAACATTCCTAACATAGCCAAACCAATCAATTGAGCCTTATTGTGGAAGAGACAGGAAATGTGATCACTTGAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425879.1 |
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| CDS CAA 72 bp | ATCACCCTCACAATAAACGTGTTGTTTTTGTCAGCATaGTCGCTGTTGTTGTTTACTATGGAATGTCACCAT | + |
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Preference number: 6 (lower is better) Translates to: ITLTINVLFLSA*SLLLFTMECHH Trigger: ATGGTGACATTCCATAGTAAACAACAACAGCGACAATGCTGACAAAAACAACACGTTTATTGTGAGGGTGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000425879.1 |
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| CDS CAA 72 bp | ACATTTAAGGGTGGAATCACCCTCACAATAAACGTGTaGTTTTTGTCAGCATTGTCGCTGTTGTTGTTTACT | + |
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Preference number: 6 (lower is better) Translates to: TFKGGITLTINV*FLSALSLLLFT Trigger: AGTAAACAACAACAGCGACAATGCTGACAAAAACAACACGTTTATTGTGAGGGTGATTCCACCCTTAAATGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000425879.1 |
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| CDS CAA 72 bp | GATCACATTTCCTGTCTCTTCCACAATAAGGCTCAATaGATTGGTTTGGCTATGTTAGGAATGTTGGACATA | + |
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Preference number: 6 (lower is better) Translates to: DHISCLFHNKAQ*IGLAMLGMLDI Trigger: TATGTCCAACATTCCTAACATAGCCAAACCAATCAATTGAGCCTTATTGTGGAAGAGACAGGAAATGTGATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000425879.1 |
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| CDS CAA 90 bp | AAATTTTCCACATTTAAGGGTGGAATCACCCTCACAATAAACGTGTaGTTTTTGTCAGCATTGTCGCTGTTGTTGTTTACTATGGAATGT | + |
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Preference number: 6 (lower is better) Translates to: KFSTFKGGITLTINV*FLSALSLLLFTMEC Trigger: ACATTCCATAGTAAACAACAACAGCGACAATGCTGACAAAAACAACACGTTTATTGTGAGGGTGATTCCACCCTTAAATGTGGAAAATTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000425879.1 |
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