Pregenerated sensors for LINC01108 (Homo sapiens)
Ensembl gene IDs: ENSG00000226673Ensembl transcript IDs: ENST00000427276.1, ENST00000635227.1
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGGGTCTGGGGTAGAGGTGGTGGACCTCATCGGTCATCACAGACGTaGCCTGGGGATGCTGGCGCCACTCCAGCCGCGTGGTGGGCAGGC | + |
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Preference number: 5 (lower is better) Translates to: RVWGRGGGPHRSSQT*PGDAGATPAAWWAG Trigger: GCCTGCCCACCACGCGGCTGGAGTGGCGCCAGCATCCCCAGGGCACGTCTGTGATGACCGATGAGGTCCACCACCTCTACCCCAGACCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS TCA 90 bp | CTGAGGACCGCCCGCTCTCTCCTGGTGACATATCAGACTGGTGTCTaGGGAGGGTGCACTCTCCTGCCACCTGCAGGACACGGGGCCACC | + |
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Preference number: 5 (lower is better) Translates to: LRTARSLLVTYQTGV*GGCTLLPPAGHGAT Trigger: GGTGGCCCCGTGTCCTGCAGGTGGCAGGAGAGTGCACCCTCCTCAGACACCAGTCTGATATGTCACCAGGAGAGAGCGGGCGGTCCTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS CCA 90 bp | AGGTGGTGGACCTCATCGGTCATCACAGACGTGCCCTGGGGATGCTaGCGCCACTCCAGCCGCGTGGTGGGCAGGCATCAGAGATCCATT | + |
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Preference number: 5 (lower is better) Translates to: RWWTSSVITDVPWGC*RHSSRVVGRHQRSI Trigger: AATGGATCTCTGATGCCTGCCCACCACGCGGCTGGAGTGGCGCCAGCATCCCCAGGGCACGTCTGTGATGACCGATGAGGTCCACCACCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS TCA 90 bp | GAGGCAGGAAGGCCGCGTCCCGAGCCATCAAATGCAACGGCGCCTTaGTGTGAAGTAGGGGAGACTGAAGGCAGAAGTGTCCCCTCTGCC | + |
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Preference number: 5 (lower is better) Translates to: EAGRPRPEPSNATAP*CEVGETEGRSVPSA Trigger: GGCAGAGGGGACACTTCTGCCTTCAGTCTCCCCTACTTCACATCAAGGCGCCGTTGCATTTGATGGCTCGGGACGCGGCCTTCCTGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS GCA 90 bp | GACATATCAGACTGGTGTCTGAGGAGGGTGCACTCTCCTGCCACCTaGAGGACACGGGGCCACCCTTGGGATGTGCCTGGTGCAGGAATG | + |
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Preference number: 5 (lower is better) Translates to: DISDWCLRRVHSPAT*RTRGHPWDVPGAGM Trigger: CATTCCTGCACCAGGCACATCCCAAGGGTGGCCCCGTGTCCTGCAGGTGGCAGGAGAGTGCACCCTCCTCAGACACCAGTCTGATATGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS CCA 90 bp | TCTGGGTGTTGGGTGAAGCCTGTCCCCAAACTTGGGCGAAGCTGTTaGAGCTGGGCGTGCAGACTCGAGCAGGACAAACCGTCCCACCTG | + |
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Preference number: 5 (lower is better) Translates to: SGCWVKPVPKLGRSC*SWACRLEQDKPSHL Trigger: CAGGTGGGACGGTTTGTCCTGCTCGAGTCTGCACGCCCAGCTCCAACAGCTTCGCCCAAGTTTGGGGACAGGCTTCACCCAACACCCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS CCA 90 bp | AGGGGACTTCACTGGGCAGAGGGAGCCTTTGGGTATGGGAGGGTCTaGGGTAGAGGTGGTGGACCTCATCGGTCATCACAGACGTGCCCT | + |
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Preference number: 5 (lower is better) Translates to: RGLHWAEGAFGYGRV*GRGGGPHRSSQTCP Trigger: AGGGCACGTCTGTGATGACCGATGAGGTCCACCACCTCTACCCCAGACCCTCCCATACCCAAAGGCTCCCTCTGCCCAGTGAAGTCCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS CCA 90 bp | GCATACACTGAGGACCGCCCGCTCTCTCCTGGTGACATATCAGACTaGTGTCTGAGGAGGGTGCACTCTCCTGCCACCTGCAGGACACGG | + |
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Preference number: 5 (lower is better) Translates to: AYTEDRPLSPGDISD*CLRRVHSPATCRTR Trigger: CCGTGTCCTGCAGGTGGCAGGAGAGTGCACCCTCCTCAGACACCAGTCTGATATGTCACCAGGAGAGAGCGGGCGGTCCTCAGTGTATGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS CCA 90 bp | TGTTGGGTGAAGCCTGTCCCCAAACTTGGGCGAAGCTGTTGGAGCTaGGCGTGCAGACTCGAGCAGGACAAACCGTCCCACCTGGTGAGA | + |
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Preference number: 5 (lower is better) Translates to: CWVKPVPKLGRSCWS*ACRLEQDKPSHLVR Trigger: TCTCACCAGGTGGGACGGTTTGTCCTGCTCGAGTCTGCACGCCCAGCTCCAACAGCTTCGCCCAAGTTTGGGGACAGGCTTCACCCAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS GCA 90 bp | AGCGATAAAACGCTGAGTGACGATTGGGTGGCAGCCACCTCTGAGTaGGGTCCAGCCCTGTGCCATTGGAGGCGAATCTTCAGGTTGCTG | + |
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Preference number: 5 (lower is better) Translates to: SDKTLSDDWVAATSE*GPALCHWRRIFRLL Trigger: CAGCAACCTGAAGATTCGCCTCCAATGGCACAGGGCTGGACCGCACTCAGAGGTGGCTGCCACCCAATCGTCACTCAGCGTTTTATCGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635227.1 |
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| CDS CCA 90 bp | GCTCCGATTATGATTGTCACGCCTGGCCTCACTAACCAGTTGTCTTaGGACATGGTTCTGCCCGGCGAATGCCGCCTCTACAACCTGTGC | + |
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Preference number: 5 (lower is better) Translates to: APIMIVTPGLTNQLS*DMVLPGECRLYNLC Trigger: GCACAGGTTGTAGAGGCGGCATTCGCCGGGCAGAACCATGTCCCAAGACAACTGGTTAGTGAGGCCAGGCGTGACAATCATAATCGGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS GCA 90 bp | CATTTAGGAAACGGTGCCCAGTCTGACTATAATGGTGGTGGCTGCTaGGCCTTCGGCCCCCTTTGCCTATGCCATTGCACAGTTGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: HLGNGAQSDYNGGGC*AFGPLCLCHCTVAA Trigger: AGCAGCAACTGTGCAATGGCATAGGCAAAGGGGGCCGAAGGCGCAGCAGCCACCACCATTATAGTCAGACTGGGCACCGTTTCCTAAATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS CCA 90 bp | GTTATTTACAGCGGCCCCAGTGAGGGGCCGGACGAAGGTTCGGACTaGAAATGTGCTTGGCTCTCCCTGAGGACAATTTCTCTGAGGAAC | + |
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Preference number: 5 (lower is better) Translates to: VIYSGPSEGPDEGSD*KCAWLSLRTISLRN Trigger: GTTCCTCAGAGAAATTGTCCTCAGGGAGAGCCAAGCACATTTCCAGTCCGAACCTTCGTCCGGCCCCTCACTGGGGCCGCTGTAAATAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS TCA 90 bp | GGTACAGCCCGGGAGAGACGGCAGCTTTGCCTCGGTGCAGTTATTTaGTTTGTTAGCCTTGTGCCAGCCTCAGTCTTCTCCAAGAAGAGG | + |
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Preference number: 5 (lower is better) Translates to: GTARERRQLCLGAVI*FVSLVPASVFSKKR Trigger: CCTCTTCTTGGAGAAGACTGAGGCTGGCACAAGGCTAACAAATCAAATAACTGCACCGAGGCAAAGCTGCCGTCTCTCCCGGGCTGTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS TCA 90 bp | TCGGCCCCCTTTGCCTATGCCATTGCACAGTTGCTGCTCCGATTATaGTTGTCACGCCTGGCCTCACTAACCAGTTGTCTTGGGACATGG | + |
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Preference number: 5 (lower is better) Translates to: SAPFAYAIAQLLLRL*LSRLASLTSCLGTW Trigger: CCATGTCCCAAGACAACTGGTTAGTGAGGCCAGGCGTGACAATCATAATCGGAGCAGCAACTGTGCAATGGCATAGGCAAAGGGGGCCGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS GCA 90 bp | CAGTCTGACTATAATGGTGGTGGCTGCTGCGCCTTCGGCCCCCTTTaGCTATGCCATTGCACAGTTGCTGCTCCGATTATGATTGTCACG | + |
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Preference number: 5 (lower is better) Translates to: QSDYNGGGCCAFGPL*LCHCTVAAPIMIVT Trigger: CGTGACAATCATAATCGGAGCAGCAACTGTGCAATGGCATAGGCAAAGGGGGCCGAAGGCGCAGCAGCCACCACCATTATAGTCAGACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS TCA 90 bp | TGGGCGTGCAGACTCGAGCAGGACAAACCGTCCCACCTGGTGAGATaGCATCAGGAGTCCTTAGGAATAGGGATGGATTTCTGCACATTC | + |
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Preference number: 5 (lower is better) Translates to: WACRLEQDKPSHLVR*HQESLGIGMDFCTF Trigger: GAATGTGCAGAAATCCATCCCTATTCCTAAGGACTCCTGATGTCATCTCACCAGGTGGGACGGTTTGTCCTGCTCGAGTCTGCACGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS GCA 90 bp | GGACTCACCAGTTCTGACCTCCAAATTAGCCAGGGTGAACGCAGATaGAGGAGATGCCGTGTGAATGCTGGGGAAGGCCATGGAAAAACA | + |
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Preference number: 5 (lower is better) Translates to: GLTSSDLQISQGERR*RRCRVNAGEGHGKT Trigger: TGTTTTTCCATGGCCTTCCCCAGCATTCACACGGCATCTCCTGCATCTGCGTTCACCCTGGCTAATTTGGAGGTCAGAACTGGTGAGTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000635227.1 |
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| CDS CCA 90 bp | CTCACAGTTCTGGAGGCTGAGAAGCTAGAGATCAGGGTGCCAGCATaGCTGGGTTCTGGGAAGGGATGGCTTCTATTATGTCCTCACTTG | + |
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Preference number: 5 (lower is better) Translates to: LTVLEAEKLEIRVPA*LGSGKGWLLLCPHL Trigger: CAAGTGAGGACATAATAGAAGCCATCCCTTCCCAGAACCCAGCCATGCTGGCACCCTGATCTCTAGCTTCTCAGCCTCCAGAACTGTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS GCA 90 bp | GCGTACACTCCCCAAACAGAGAGTCCAGAAGTATCCCTCCGGCGCTaGAGGGATGACCAAGTTAATTTTGTCTGTAACCGTGAGAGGCTT | + |
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Preference number: 5 (lower is better) Translates to: AYTPQTESPEVSLRR*RDDQVNFVCNRERL Trigger: AAGCCTCTCACGGTTACAGACAAAATTAACTTGGTCATCCCTGCAGCGCCGGAGGGATACTTCTGGACTCTCTGTTTGGGGAGTGTACGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS GCA 90 bp | ATCGAGGGAGGCAGAGCTCTTACGGCGCTCCAGCCAGTGTCTGCCTaGTTCTGGAAATACCTCATCTTCCAGAAAAGCATTCATTTGTCA | + |
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Preference number: 5 (lower is better) Translates to: IEGGRALTALQPVSA*FWKYLIFQKSIHLS Trigger: TGACAAATGAATGCTTTTCTGGAAGATGAGGTATTTCCAGAAGCAGGCAGACACTGGCTGGAGCGCCGTAAGAGCTCTGCCTCCCTCGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS GCA 90 bp | ACGAATCGAGGGAGGCAGAGCTCTTACGGCGCTCCAGCCAGTGTCTaGCTGCTTCTGGAAATACCTCATCTTCCAGAAAAGCATTCATTT | + |
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Preference number: 5 (lower is better) Translates to: TNRGRQSSYGAPASV*LLLEIPHLPEKHSF Trigger: AAATGAATGCTTTTCTGGAAGATGAGGTATTTCCAGAAGCAGGCAGACACTGGCTGGAGCGCCGTAAGAGCTCTGCCTCCCTCGATTCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS GCA 90 bp | CCTCTTGATAAGGTCACTAATCTCATTATGAGGGCCCCACCCTCATaGCCTCATCTAACCCTAATCACATCCCAAAGGCCCCACCTCCTA | + |
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Preference number: 5 (lower is better) Translates to: PLDKVTNLIMRAPPS*PHLTLITSQRPHLL Trigger: TAGGAGGTGGGGCCTTTGGGATGTGATTAGGGTTAGATGAGGGCATGAGGGTGGGGCCCTCATAATGAGATTAGTGACCTTATCAAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS CCA 90 bp | GGAGGCAGAGCTCTTACGGCGCTCCAGCCAGTGTCTGCCTGCTTCTaGAAATACCTCATCTTCCAGAAAAGCATTCATTTGTCAACAGAG | + |
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Preference number: 5 (lower is better) Translates to: GGRALTALQPVSACF*KYLIFQKSIHLSTE Trigger: CTCTGTTGACAAATGAATGCTTTTCTGGAAGATGAGGTATTTCCAGAAGCAGGCAGACACTGGCTGGAGCGCCGTAAGAGCTCTGCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS TCA 90 bp | GTCCAGCCCTGTGCCATTGGAGGCGAATCTTCAGGTTGCTGGATTTaGAACTTACACAAACACTCACTCCTGGAAGCAGCATCTTTGTTG | + |
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Preference number: 5 (lower is better) Translates to: VQPCAIGGESSGCWI*NLHKHSLLEAASLL Trigger: CAACAAAGATGCTGCTTCCAGGAGTGAGTGTTTGTGTAAGTTTCAAATCCAGCAACCTGAAGATTCGCCTCCAATGGCACAGGGCTGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635227.1 |
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| CDS CCA 90 bp | GATCTCCTGGAAGCAGCATCTTTGTTGAGGTGTGAAGAGCAAATATaGCTCATTGGTTCTTGGTGTCACCTGCTACAGGGACTCACCAGT | + |
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Preference number: 5 (lower is better) Translates to: DLLEAASLLRCEEQI*LIGSWCHLLQGLTS Trigger: ACTGGTGAGTCCCTGTAGCAGGTGACACCAAGAACCAATGAGCCATATTTGCTCTTCACACCTCAACAAAGATGCTGCTTCCAGGAGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS CCA 90 bp | ACAGGCCACAGAGAAGCAAGGATAATTGAGGACCACGAGGTCCTCTaGGACTCACGGTTCATAGAGAGACAGATAAAGAAGCAAGTACAG | + |
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Preference number: 5 (lower is better) Translates to: TGHREARIIEDHEVL*DSRFIERQIKKQVQ Trigger: CTGTACTTGCTTCTTTATCTGTCTCTCTATGAACCGTGAGTCCCAGAGGACCTCGTGGTCCTCAATTATCCTTGCTTCTCTGTGGCCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS CCA 90 bp | TCACTCCTGGAAGCAGCATCTTTGTTGAGGTGTGAAGAGCAAATATaGCTCATTGGTTCTTGGTGTCACCTGCTACAGGGACTCACCAGT | + |
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Preference number: 5 (lower is better) Translates to: SLLEAASLLRCEEQI*LIGSWCHLLQGLTS Trigger: ACTGGTGAGTCCCTGTAGCAGGTGACACCAAGAACCAATGAGCCATATTTGCTCTTCACACCTCAACAAAGATGCTGCTTCCAGGAGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635227.1 |
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| CDS TCA 90 bp | CAGAGTTCTTGCAGATCTCCTGGAAGCAGCATCTTTGTTGAGGTGTaGAGAGCAAATATGGCTCATTGGTTCTTGGTGTCACCTGCTACA | + |
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Preference number: 5 (lower is better) Translates to: QSSCRSPGSSIFVEV*RANMAHWFLVSPAT Trigger: TGTAGCAGGTGACACCAAGAACCAATGAGCCATATTTGCTCTTCACACCTCAACAAAGATGCTGCTTCCAGGAGATCTGCAAGAACTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS CCA 90 bp | TTTTGTGGCTTTCCCTCCATAACAAACCGTGGTCTAGACAGGATCTaGCTAGAAATTCCCTTATTACCACCCCGGCCAGACTCCATTTAT | + |
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Preference number: 5 (lower is better) Translates to: FCGFPSITNRGLDRI*LEIPLLPPRPDSIY Trigger: ATAAATGGAGTCTGGCCGGGGTGGTAATAAGGGAATTTCTAGCCAGATCCTGTCTAGACCACGGTTTGTTATGGAGGGAAAGCCACAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS CCA 90 bp | GCATCTTTGTTGAGGTGTGAAGAGCAAATATGGCTCATTGGTTCTTaGTGTCACCTGCTACAGGGACTCACCAGTTCTGACCTCCAAATT | + |
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Preference number: 5 (lower is better) Translates to: ASLLRCEEQIWLIGS*CHLLQGLTSSDLQI Trigger: AATTTGGAGGTCAGAACTGGTGAGTCCCTGTAGCAGGTGACACCAAGAACCAATGAGCCATATTTGCTCTTCACACCTCAACAAAGATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635227.1 |
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| CDS TCA 90 bp | CTTACACAAACACTCACTCCTGGAAGCAGCATCTTTGTTGAGGTGTaGAGAGCAAATATGGCTCATTGGTTCTTGGTGTCACCTGCTACA | + |
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Preference number: 5 (lower is better) Translates to: LTQTLTPGSSIFVEV*RANMAHWFLVSPAT Trigger: TGTAGCAGGTGACACCAAGAACCAATGAGCCATATTTGCTCTTCACACCTCAACAAAGATGCTGCTTCCAGGAGTGAGTGTTTGTGTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635227.1 |
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| CDS TCA 90 bp | GCCTTCCGGGTTACAGGCACAAGGGCCAGGACTTATTTTCATGGCTaGATAGCACATGTGAAATGTAGGCGATTTCTAATCCATATTATA | + |
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Preference number: 5 (lower is better) Translates to: AFRVTGTRARTYFHG*IAHVKCRRFLIHII Trigger: TATAATATGGATTAGAAATCGCCTACATTTCACATGTGCTATTCAGCCATGAAAATAAGTCCTGGCCCTTGTGCCTGTAACCCGGAAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS CCA 90 bp | CTGAAGTTTCCTGTCACCTTCTCTTCAAGTAGCTTTGCCATTAACTaGGTCCCTTTAAGCAGGTTGCTGAATCCCAGTTTTCACTTCTAT | + |
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Preference number: 5 (lower is better) Translates to: LKFPVTFSSSSFAIN*VPLSRLLNPSFHFY Trigger: ATAGAAGTGAAAACTGGGATTCAGCAACCTGCTTAAAGGGACCCAGTTAATGGCAAAGCTACTTGAAGAGAAGGTGACAGGAAACTTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS TCA 90 bp | AGTACCCTCACCATCCTAATGTACCTAATGATTGTCTACACCTCCTaGAGTTTCCTGTCACCTTCTCTTCAAGTAGCTTTGCCATTAACT | + |
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Preference number: 5 (lower is better) Translates to: STLTILMYLMIVYTS*SFLSPSLQVALPLT Trigger: AGTTAATGGCAAAGCTACTTGAAGAGAAGGTGACAGGAAACTTCAGGAGGTGTAGACAATCATTAGGTACATTAGGATGGTGAGGGTACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS CCA 90 bp | CTCAAGGGAGAAATATGCAGTAAATCAGAGCTTTTGAAAGACAACTaGGGCCTGTGCCGGTTTTTGAATAACTCGTCGTTTAATAAATGT | + |
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Preference number: 5 (lower is better) Translates to: LKGEICSKSELLKDN*GLCRFLNNSSFNKC Trigger: ACATTTATTAAACGACGAGTTATTCAAAAACCGGCACAGGCCCCAGTTGTCTTTCAAAAGCTCTGATTTACTGCATATTTCTCCCTTGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000635227.1 |
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| CDS CCA 72 bp | AGGTGGTGGACCTCATCGGTCATCACAGACGTGCCCTaGGGATGCTGGCGCCACTCCAGCCGCGTGGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: RWWTSSVITDVP*GCWRHSSRVVG Trigger: GCCCACCACGCGGCTGGAGTGGCGCCAGCATCCCCAGGGCACGTCTGTGATGACCGATGAGGTCCACCACCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS GCA 72 bp | TGGACCTCATCGGTCATCACAGACGTGCCCTGGGGATaGTGGCGCCACTCCAGCCGCGTGGTGGGCAGGCAT | + |
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Preference number: 6 (lower is better) Translates to: WTSSVITDVPWG*WRHSSRVVGRH Trigger: ATGCCTGCCCACCACGCGGCTGGAGTGGCGCCAGCATCCCCAGGGCACGTCTGTGATGACCGATGAGGTCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS GCA 72 bp | GGTAGAGGTGGTGGACCTCATCGGTCATCACAGACGTaGCCTGGGGATGCTGGCGCCACTCCAGCCGCGTGG | + |
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Preference number: 6 (lower is better) Translates to: GRGGGPHRSSQT*PGDAGATPAAW Trigger: CCACGCGGCTGGAGTGGCGCCAGCATCCCCAGGGCACGTCTGTGATGACCGATGAGGTCCACCACCTCTACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS CCA 72 bp | ACCTCATCGGTCATCACAGACGTGCCCTGGGGATGCTaGCGCCACTCCAGCCGCGTGGTGGGCAGGCATCAG | + |
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Preference number: 6 (lower is better) Translates to: TSSVITDVPWGC*RHSSRVVGRHQ Trigger: CTGATGCCTGCCCACCACGCGGCTGGAGTGGCGCCAGCATCCCCAGGGCACGTCTGTGATGACCGATGAGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS CCA 72 bp | CACTCTCCTGCCACCTGCAGGACACGGGGCCACCCTTaGGATGTGCCTGGTGCAGGAATGCTGGGGCGAAGG | + |
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Preference number: 6 (lower is better) Translates to: HSPATCRTRGHP*DVPGAGMLGRR Trigger: CCTTCGCCCCAGCATTCCTGCACCAGGCACATCCCAAGGGTGGCCCCGTGTCCTGCAGGTGGCAGGAGAGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS CAA 72 bp | GCACTCTCCTGCCACCTGCAGGACACGGGGCCACCCTaGGGATGTGCCTGGTGCAGGAATGCTGGGGCGAAG | + |
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Preference number: 6 (lower is better) Translates to: ALSCHLQDTGPP*GCAWCRNAGAK Trigger: CTTCGCCCCAGCATTCCTGCACCAGGCACATCCCAAGGGTGGCCCCGTGTCCTGCAGGTGGCAGGAGAGTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS GCA 72 bp | GTCCCCAAACTTGGGCGAAGCTGTTGGAGCTGGGCGTaGAGACTCGAGCAGGACAAACCGTCCCACCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: VPKLGRSCWSWA*RLEQDKPSHLV Trigger: CACCAGGTGGGACGGTTTGTCCTGCTCGAGTCTGCACGCCCAGCTCCAACAGCTTCGCCCAAGTTTGGGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS CCA 72 bp | GAGGACCGCCCGCTCTCTCCTGGTGACATATCAGACTaGTGTCTGAGGAGGGTGCACTCTCCTGCCACCTGC | + |
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Preference number: 6 (lower is better) Translates to: EDRPLSPGDISD*CLRRVHSPATC Trigger: GCAGGTGGCAGGAGAGTGCACCCTCCTCAGACACCAGTCTGATATGTCACCAGGAGAGAGCGGGCGGTCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS TCA 72 bp | GCCCGCTCTCTCCTGGTGACATATCAGACTGGTGTCTaGGGAGGGTGCACTCTCCTGCCACCTGCAGGACAC | + |
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Preference number: 6 (lower is better) Translates to: ARSLLVTYQTGV*GGCTLLPPAGH Trigger: GTGTCCTGCAGGTGGCAGGAGAGTGCACCCTCCTCAGACACCAGTCTGATATGTCACCAGGAGAGAGCGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS GCA 72 bp | ACGCTGAGTGACGATTGGGTGGCAGCCACCTCTGAGTaGGGTCCAGCCCTGTGCCATTGGAGGCGAATCTTC | + |
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Preference number: 6 (lower is better) Translates to: TLSDDWVAATSE*GPALCHWRRIF Trigger: GAAGATTCGCCTCCAATGGCACAGGGCTGGACCGCACTCAGAGGTGGCTGCCACCCAATCGTCACTCAGCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635227.1 |
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| CDS CCA 72 bp | AAGCCTGTCCCCAAACTTGGGCGAAGCTGTTGGAGCTaGGCGTGCAGACTCGAGCAGGACAAACCGTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: KPVPKLGRSCWS*ACRLEQDKPSH Trigger: GTGGGACGGTTTGTCCTGCTCGAGTCTGCACGCCCAGCTCCAACAGCTTCGCCCAAGTTTGGGGACAGGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS GCA 72 bp | GGAAACGGTGCCCAGTCTGACTATAATGGTGGTGGCTaGTGCGCCTTCGGCCCCCTTTGCCTATGCCATTGC | + |
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Preference number: 6 (lower is better) Translates to: GNGAQSDYNGGG*CAFGPLCLCHC Trigger: GCAATGGCATAGGCAAAGGGGGCCGAAGGCGCAGCAGCCACCACCATTATAGTCAGACTGGGCACCGTTTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS CCA 72 bp | AGCGGCCCCAGTGAGGGGCCGGACGAAGGTTCGGACTaGAAATGTGCTTGGCTCTCCCTGAGGACAATTTCT | + |
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Preference number: 6 (lower is better) Translates to: SGPSEGPDEGSD*KCAWLSLRTIS Trigger: AGAAATTGTCCTCAGGGAGAGCCAAGCACATTTCCAGTCCGAACCTTCGTCCGGCCCCTCACTGGGGCCGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427276.1 |
||
| CDS TCA 72 bp | AGGCCGCGTCCCGAGCCATCAAATGCAACGGCGCCTTaGTGTGAAGTAGGGGAGACTGAAGGCAGAAGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: RPRPEPSNATAP*CEVGETEGRSV Trigger: GACACTTCTGCCTTCAGTCTCCCCTACTTCACATCAAGGCGCCGTTGCATTTGATGGCTCGGGACGCGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS GCA 72 bp | CGCCTTCGGCCCCCTTTGCCTATGCCATTGCACAGTTaGTGCTCCGATTATGATTGTCACGCCTGGCCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: RLRPPLPMPLHS*CSDYDCHAWPH Trigger: GTGAGGCCAGGCGTGACAATCATAATCGGAGCAGCAACTGTGCAATGGCATAGGCAAAGGGGGCCGAAGGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS GCA 72 bp | AACGGTGCCCAGTCTGACTATAATGGTGGTGGCTGCTaGGCCTTCGGCCCCCTTTGCCTATGCCATTGCACA | + |
|
Preference number: 6 (lower is better) Translates to: NGAQSDYNGGGC*AFGPLCLCHCT Trigger: TGTGCAATGGCATAGGCAAAGGGGGCCGAAGGCGCAGCAGCCACCACCATTATAGTCAGACTGGGCACCGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS CCA 72 bp | TCACGCCTGGCCTCACTAACCAGTTGTCTTGGGACATaGTTCTGCCCGGCGAATGCCGCCTCTACAACCTGT | + |
|
Preference number: 6 (lower is better) Translates to: SRLASLTSCLGT*FCPANAASTTC Trigger: ACAGGTTGTAGAGGCGGCATTCGCCGGGCAGAACCATGTCCCAAGACAACTGGTTAGTGAGGCCAGGCGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS CAA 72 bp | TGGCTGCTGCGCCTTCGGCCCCCTTTGCCTATGCCATaGCACAGTTGCTGCTCCGATTATGATTGTCACGCC | + |
|
Preference number: 6 (lower is better) Translates to: WLLRLRPPLPMP*HSCCSDYDCHA Trigger: GGCGTGACAATCATAATCGGAGCAGCAACTGTGCAATGGCATAGGCAAAGGGGGCCGAAGGCGCAGCAGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS GCA 72 bp | CCTACCCCCATTTCTCCAGGAAGCCTTGAAATCCTTTaGCAAGCAGGGCACCAGAGTTCCTGGGGCTCGTCT | + |
|
Preference number: 6 (lower is better) Translates to: PTPISPGSLEIL*QAGHQSSWGSS Trigger: AGACGAGCCCCAGGAACTCTGGTGCCCTGCTTGGCAAAGGATTTCAAGGCTTCCTGGAGAAATGGGGGTAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS CCA 72 bp | ATGATTGTCACGCCTGGCCTCACTAACCAGTTGTCTTaGGACATGGTTCTGCCCGGCGAATGCCGCCTCTAC | + |
|
Preference number: 6 (lower is better) Translates to: MIVTPGLTNQLS*DMVLPGECRLY Trigger: GTAGAGGCGGCATTCGCCGGGCAGAACCATGTCCCAAGACAACTGGTTAGTGAGGCCAGGCGTGACAATCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS CAA 72 bp | CCGATTATGATTGTCACGCCTGGCCTCACTAACCAGTaGTCTTGGGACATGGTTCTGCCCGGCGAATGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: PIMIVTPGLTNQ*SWDMVLPGECR Trigger: GCGGCATTCGCCGGGCAGAACCATGTCCCAAGACAACTGGTTAGTGAGGCCAGGCGTGACAATCATAATCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS TCA 72 bp | TTAGCCAGGGTGAACGCAGATGCAGGAGATGCCGTGTaGATGCTGGGGAAGGCCATGGAAAAACACAGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: LARVNADAGDAV*MLGKAMEKHRP Trigger: AGGCCTGTGTTTTTCCATGGCCTTCCCCAGCATTCACACGGCATCTCCTGCATCTGCGTTCACCCTGGCTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000635227.1 |
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| CDS GCA 72 bp | CTGGCCTCACTAACCAGTTGTCTTGGGACATGGTTCTaGCCGGCGAATGCCGCCTCTACAACCTGTGCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: LASLTSCLGTWF*PANAASTTCAF Trigger: AAAAGCACAGGTTGTAGAGGCGGCATTCGCCGGGCAGAACCATGTCCCAAGACAACTGGTTAGTGAGGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS GCA 72 bp | TATAATGGTGGTGGCTGCTGCGCCTTCGGCCCCCTTTaGCTATGCCATTGCACAGTTGCTGCTCCGATTATG | + |
|
Preference number: 6 (lower is better) Translates to: YNGGGCCAFGPL*LCHCTVAAPIM Trigger: CATAATCGGAGCAGCAACTGTGCAATGGCATAGGCAAAGGGGGCCGAAGGCGCAGCAGCCACCACCATTATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS TCA 72 bp | AGGGGCCAAATAACTGCACAGATTCTGGGTGTTGGGTaGAGCCTGTCCCCAAACTTGGGCGAAGCTGTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: RGQITAQILGVG*SLSPNLGEAVG Trigger: TCCAACAGCTTCGCCCAAGTTTGGGGACAGGCTTCACCCAACACCCAGAATCTGTGCAGTTATTTGGCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS TCA 72 bp | CGGGAGAGACGGCAGCTTTGCCTCGGTGCAGTTATTTaGTTTGTTAGCCTTGTGCCAGCCTCAGTCTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RERRQLCLGAVI*FVSLVPASVFS Trigger: GGAGAAGACTGAGGCTGGCACAAGGCTAACAAATCAAATAACTGCACCGAGGCAAAGCTGCCGTCTCTCCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427276.1 |
||
| CDS TCA 72 bp | GTCCCCTCTGCCTTGCTGAAAACTGGAGCTGCTGGGTaGAGACAGGGTGATTACCCACGTCTGACTTTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: VPSALLKTGAAG*RQGDYPRLTFL Trigger: AAGGAAAGTCAGACGTGGGTAATCACCCTGTCTTCACCCAGCAGCTCCAGTTTTCAGCAAGGCAGAGGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS TCA 72 bp | TTAGCACTCGAACAGAATAGCCCAGCGATAAAACGCTaGGTGACGATTGGGTGGCAGCCACCTCTGAGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: LALEQNSPAIKR*VTIGWQPPLSA Trigger: CGCACTCAGAGGTGGCTGCCACCCAATCGTCACTCAGCGTTTTATCGCTGGGCTATTCTGTTCGAGTGCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635227.1 |
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| CDS GCA 72 bp | TTGCCAAGCAGGGCACCAGAGTTCCTGGGGCTCGTCTaGAAATTAGGTCCTCACCAGCATCCTCCTTTCATT | + |
|
Preference number: 6 (lower is better) Translates to: LPSRAPEFLGLV*KLGPHQHPPFI Trigger: AATGAAAGGAGGATGCTGGTGAGGACCTAATTTGCAGACGAGCCCCAGGAACTCTGGTGCCCTGCTTGGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS CCA 72 bp | ATCAGGGTGCCAGCATGGCTGGGTTCTGGGAAGGGATaGCTTCTATTATGTCCTCACTTGGCCTTTCACTGG | + |
|
Preference number: 6 (lower is better) Translates to: IRVPAWLGSGKG*LLLCPHLAFHW Trigger: CCAGTGAAAGGCCAAGTGAGGACATAATAGAAGCCATCCCTTCCCAGAACCCAGCCATGCTGGCACCCTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS CCA 72 bp | GAAGCTAGAGATCAGGGTGCCAGCATGGCTGGGTTCTaGGAAGGGATGGCTTCTATTATGTCCTCACTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: EARDQGASMAGF*EGMASIMSSLG Trigger: GCCAAGTGAGGACATAATAGAAGCCATCCCTTCCCAGAACCCAGCCATGCTGGCACCCTGATCTCTAGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS CCA 72 bp | CTGGAGGCTGAGAAGCTAGAGATCAGGGTGCCAGCATaGCTGGGTTCTGGGAAGGGATGGCTTCTATTATGT | + |
|
Preference number: 6 (lower is better) Translates to: LEAEKLEIRVPA*LGSGKGWLLLC Trigger: ACATAATAGAAGCCATCCCTTCCCAGAACCCAGCCATGCTGGCACCCTGATCTCTAGCTTCTCAGCCTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS GCA 72 bp | AACCGTGAGAGGCTTTTCAATGAGGGGCCAAATAACTaGACAGATTCTGGGTGTTGGGTGAAGCCTGTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: NRERLFNEGPNN*TDSGCWVKPVP Trigger: GGGGACAGGCTTCACCCAACACCCAGAATCTGTGCAGTTATTTGGCCCCTCATTGAAAAGCCTCTCACGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS GCA 72 bp | CTCCAAATTAGCCAGGGTGAACGCAGATGCAGGAGATaGCGTGTGAATGCTGGGGAAGGCCATGGAAAAACA | + |
|
Preference number: 6 (lower is better) Translates to: LQISQGERRCRR*RVNAGEGHGKT Trigger: TGTTTTTCCATGGCCTTCCCCAGCATTCACACGGCATCTCCTGCATCTGCGTTCACCCTGGCTAATTTGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000635227.1 |
||
| CDS CAA 90 bp | CAGCCCGGGAGAGACGGCAGCTTTGCCTCGGTGCAGTTATTTGATTaGTTAGCCTTGTGCCAGCCTCAGTCTTCTCCAAGAAGAGGTTTA | + |
|
Preference number: 6 (lower is better) Translates to: QPGRDGSFASVQLFD*LALCQPQSSPRRGL Trigger: TAAACCTCTTCTTGGAGAAGACTGAGGCTGGCACAAGGCTAACAAATCAAATAACTGCACCGAGGCAAAGCTGCCGTCTCTCCCGGGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS CAA 90 bp | AAATTCCCTTATTACCACCCCGGCCAGACTCCATTTATCATCACCTaGAACGTAATGCTCGCGCAAAACCTCCAGGCCTCTCCCGTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: KFPYYHPGQTPFIIT*NVMLAQNLQASPVH Trigger: GTGAACGGGAGAGGCCTGGAGGTTTTGCGCGAGCATTACGTTCAAGGTGATGATAAATGGAGTCTGGCCGGGGTGGTAATAAGGGAATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS TCA 72 bp | AGACTCGAGCAGGACAAACCGTCCCACCTGGTGAGATaGCATCAGGAGTCCTTAGGAATAGGGATGGATTTC | + |
|
Preference number: 6 (lower is better) Translates to: RLEQDKPSHLVR*HQESLGIGMDF Trigger: GAAATCCATCCCTATTCCTAAGGACTCCTGATGTCATCTCACCAGGTGGGACGGTTTGTCCTGCTCGAGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS TCA 72 bp | GAGCTGCTGGGTGAAGACAGGGTGATTACCCACGTCTaGCTTTCCTTTTTATATCTGGGGTGCCAGGGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: ELLGEDRVITHV*LSFLYLGCQGL Trigger: TAAGCCCTGGCACCCCAGATATAAAAAGGAAAGTCAGACGTGGGTAATCACCCTGTCTTCACCCAGCAGCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS GCA 72 bp | ATGGTTCTGCCCGGCGAATGCCGCCTCTACAACCTGTaGTTTTTCCAAGGTCTTCTTGAGGAGCCAAAACAA | + |
|
Preference number: 6 (lower is better) Translates to: MVLPGECRLYNL*FFQGLLEEPKQ Trigger: TTGTTTTGGCTCCTCAAGAAGACCTTGGAAAAAGCACAGGTTGTAGAGGCGGCATTCGCCGGGCAGAACCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS CCA 72 bp | ACGGCACGTATTGAATTTCTCATTAGCCCCACTGCCTaGTTCTCATTAGTGAGCCTTCCGGGTTACAGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: TARIEFLISPTA*FSLVSLPGYRH Trigger: GTGCCTGTAACCCGGAAGGCTCACTAATGAGAACCAGGCAGTGGGGCTAATGAGAAATTCAATACGTGCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS CAA 72 bp | TATCCCTCCGGCGCTGCAGGGATGACCAAGTTAATTTaGTCTGTAACCGTGAGAGGCTTTTCAATGAGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: YPSGAAGMTKLI*SVTVRGFSMRG Trigger: GCCCCTCATTGAAAAGCCTCTCACGGTTACAGACAAAATTAACTTGGTCATCCCTGCAGCGCCGGAGGGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS CAA 72 bp | TATTACCACCCCGGCCAGACTCCATTTATCATCACCTaGAACGTAATGCTCGCGCAAAACCTCCAGGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: YYHPGQTPFIIT*NVMLAQNLQAS Trigger: AGAGGCCTGGAGGTTTTGCGCGAGCATTACGTTCAAGGTGATGATAAATGGAGTCTGGCCGGGGTGGTAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS CCA 72 bp | TTTCCCTCCATAACAAACCGTGGTCTAGACAGGATCTaGCTAGAAATTCCCTTATTACCACCCCGGCCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: FPSITNRGLDRI*LEIPLLPPRPD Trigger: GTCTGGCCGGGGTGGTAATAAGGGAATTTCTAGCCAGATCCTGTCTAGACCACGGTTTGTTATGGAGGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS CAA 90 bp | GTCCAGAAGTATCCCTCCGGCGCTGCAGGGATGACCAAGTTAATTTaGTCTGTAACCGTGAGAGGCTTTTCAATGAGGGGCCAAATAACT | + |
|
Preference number: 6 (lower is better) Translates to: VQKYPSGAAGMTKLI*SVTVRGFSMRGQIT Trigger: AGTTATTTGGCCCCTCATTGAAAAGCCTCTCACGGTTACAGACAAAATTAACTTGGTCATCCCTGCAGCGCCGGAGGGATACTTCTGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS CAA 90 bp | GGTCCAGCCCTGTGCCATTGGAGGCGAATCTTCAGGTTGCTGGATTaGAAACTTACACAAACACTCACTCCTGGAAGCAGCATCTTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: GPALCHWRRIFRLLD*KLTQTLTPGSSIFV Trigger: AACAAAGATGCTGCTTCCAGGAGTGAGTGTTTGTGTAAGTTTCAAATCCAGCAACCTGAAGATTCGCCTCCAATGGCACAGGGCTGGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635227.1 |
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| CDS TCA 72 bp | TTTGCCTATGCCATTGCACAGTTGCTGCTCCGATTATaGTTGTCACGCCTGGCCTCACTAACCAGTTGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: FAYAIAQLLLRL*LSRLASLTSCL Trigger: AAGACAACTGGTTAGTGAGGCCAGGCGTGACAATCATAATCGGAGCAGCAACTGTGCAATGGCATAGGCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS CCA 72 bp | TTGAGGTGTGAAGAGCAAATATGGCTCATTGGTTCTTaGTGTCACCTGCTACAGGGACTCACCAGTTCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: LRCEEQIWLIGS*CHLLQGLTSSD Trigger: GTCAGAACTGGTGAGTCCCTGTAGCAGGTGACACCAAGAACCAATGAGCCATATTTGCTCTTCACACCTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635227.1 |
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| CDS CAA 90 bp | TTGTGCCAGCCTCAGTCTTCTCCAAGAAGAGGTTTAAATCTCTTCTaGAAACGGTTTGAGCGTACACTCCCCAAACAGAGAGTCCAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LCQPQSSPRRGLNLF*KRFERTLPKQRVQK Trigger: CTTCTGGACTCTCTGTTTGGGGAGTGTACGCTCAAACCGTTTCAAGAAGAGATTTAAACCTCTTCTTGGAGAAGACTGAGGCTGGCACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS TCA 72 bp | CTTGCTGAAAACTGGAGCTGCTGGGTGAAGACAGGGTaGTTACCCACGTCTGACTTTCCTTTTTATATCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LAENWSCWVKTG*LPTSDFPFYIW Trigger: CCAGATATAAAAAGGAAAGTCAGACGTGGGTAATCACCCTGTCTTCACCCAGCAGCTCCAGTTTTCAGCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS TCA 72 bp | TGTGCCATTGGAGGCGAATCTTCAGGTTGCTGGATTTaGAACTTACACAAACACTCACTCCTGGAAGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: CAIGGESSGCWI*NLHKHSLLEAA Trigger: TGCTGCTTCCAGGAGTGAGTGTTTGTGTAAGTTTCAAATCCAGCAACCTGAAGATTCGCCTCCAATGGCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635227.1 |
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| CDS CCA 72 bp | AGCCCCCTTTTGTGGCTTTCCCTCCATAACAAACCGTaGTCTAGACAGGATCTGGCTAGAAATTCCCTTATT | + |
|
Preference number: 6 (lower is better) Translates to: SPLLWLSLHNKP*SRQDLARNSLI Trigger: AATAAGGGAATTTCTAGCCAGATCCTGTCTAGACCACGGTTTGTTATGGAGGGAAAGCCACAAAAGGGGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS GCA 72 bp | AAGAGCAAATATGGCTCATTGGTTCTTGGTGTCACCTaGTACAGGGACTCACCAGTTCTGACCTCCAAATTA | + |
|
Preference number: 6 (lower is better) Translates to: KSKYGSLVLGVT*YRDSPVLTSKL Trigger: TAATTTGGAGGTCAGAACTGGTGAGTCCCTGTAGCAGGTGACACCAAGAACCAATGAGCCATATTTGCTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635227.1 |
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| CDS CCA 72 bp | CCTGTCACCTTCTCTTCAAGTAGCTTTGCCATTAACTaGGTCCCTTTAAGCAGGTTGCTGAATCCCAGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: PVTFSSSSFAIN*VPLSRLLNPSF Trigger: AAAACTGGGATTCAGCAACCTGCTTAAAGGGACCCAGTTAATGGCAAAGCTACTTGAAGAGAAGGTGACAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS TCA 72 bp | GAGTTCTTGCAGATCTCCTGGAAGCAGCATCTTTGTTaGGGTGTGAAGAGCAAATATGGCTCATTGGTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: EFLQISWKQHLC*GVKSKYGSLVL Trigger: AAGAACCAATGAGCCATATTTGCTCTTCACACCTCAACAAAGATGCTGCTTCCAGGAGATCTGCAAGAACTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS CAA 72 bp | AGAGTTCTTGCAGATCTCCTGGAAGCAGCATCTTTGTaGAGGTGTGAAGAGCAAATATGGCTCATTGGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: RVLADLLEAASL*RCEEQIWLIGS Trigger: AGAACCAATGAGCCATATTTGCTCTTCACACCTCAACAAAGATGCTGCTTCCAGGAGATCTGCAAGAACTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS CAA 72 bp | TTCAGAGTTCTTGCAGATCTCCTGGAAGCAGCATCTTaGTTGAGGTGTGAAGAGCAAATATGGCTCATTGGT | + |
|
Preference number: 6 (lower is better) Translates to: FRVLADLLEAAS*LRCEEQIWLIG Trigger: ACCAATGAGCCATATTTGCTCTTCACACCTCAACAAAGATGCTGCTTCCAGGAGATCTGCAAGAACTCTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS CAA 72 bp | GTCCTTAGGAATAGGGATGGATTTCTGCACATTCCATaGGTGCTGATTATCACAGGAGATATGAAAGTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: VLRNRDGFLHIP*VLIITGDMKVA Trigger: CGCCACTTTCATATCTCCTGTGATAATCAGCACCAATGGAATGTGCAGAAATCCATCCCTATTCCTAAGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS CAA 90 bp | ACATCAGGAGTCCTTAGGAATAGGGATGGATTTCTGCACATTCCATaGGTGCTGATTATCACAGGAGATATGAAAGTGGCGATCAAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: TSGVLRNRDGFLHIP*VLIITGDMKVAIKA Trigger: AGCTTTGATCGCCACTTTCATATCTCCTGTGATAATCAGCACCAATGGAATGTGCAGAAATCCATCCCTATTCCTAAGGACTCCTGATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS TCA 72 bp | GTTACAGGCACAAGGGCCAGGACTTATTTTCATGGCTaGATAGCACATGTGAAATGTAGGCGATTTCTAATC | + |
|
Preference number: 6 (lower is better) Translates to: VTGTRARTYFHG*IAHVKCRRFLI Trigger: GATTAGAAATCGCCTACATTTCACATGTGCTATTCAGCCATGAAAATAAGTCCTGGCCCTTGTGCCTGTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS TCA 72 bp | TACACAAACACTCACTCCTGGAAGCAGCATCTTTGTTaGGGTGTGAAGAGCAAATATGGCTCATTGGTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: YTNTHSWKQHLC*GVKSKYGSLVL Trigger: AAGAACCAATGAGCCATATTTGCTCTTCACACCTCAACAAAGATGCTGCTTCCAGGAGTGAGTGTTTGTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635227.1 |
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| CDS CAA 72 bp | TTACACAAACACTCACTCCTGGAAGCAGCATCTTTGTaGAGGTGTGAAGAGCAAATATGGCTCATTGGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LHKHSLLEAASL*RCEEQIWLIGS Trigger: AGAACCAATGAGCCATATTTGCTCTTCACACCTCAACAAAGATGCTGCTTCCAGGAGTGAGTGTTTGTGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635227.1 |
||
| CDS CAA 72 bp | AACTTACACAAACACTCACTCCTGGAAGCAGCATCTTaGTTGAGGTGTGAAGAGCAAATATGGCTCATTGGT | + |
|
Preference number: 6 (lower is better) Translates to: NLHKHSLLEAAS*LRCEEQIWLIG Trigger: ACCAATGAGCCATATTTGCTCTTCACACCTCAACAAAGATGCTGCTTCCAGGAGTGAGTGTTTGTGTAAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635227.1 |
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| CDS CAA 90 bp | CCACTCAGACTTTTCCTACACATATTGGCTCCTGTAGAAAGTAAATaGAAAGGAAACGGGAAGGAGAGACGGCACGTATTGAATTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: PLRLFLHILAPVESK*KGNGKERRHVLNFS Trigger: TGAGAAATTCAATACGTGCCGTCTCTCCTTCCCGTTTCCTTTCAATTTACTTTCTACAGGAGCCAATATGTGTAGGAAAAGTCTGAGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS TCA 72 bp | ACCATCCTAATGTACCTAATGATTGTCTACACCTCCTaGAGTTTCCTGTCACCTTCTCTTCAAGTAGCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: TILMYLMIVYTS*SFLSPSLQVAL Trigger: CAAAGCTACTTGAAGAGAAGGTGACAGGAAACTTCAGGAGGTGTAGACAATCATTAGGTACATTAGGATGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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| CDS CCA 72 bp | GAAATATGCAGTAAATCAGAGCTTTTGAAAGACAACTaGGGCCTGTGCCGGTTTTTGAATAACTCGTCGTTT | + |
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Preference number: 6 (lower is better) Translates to: EICSKSELLKDN*GLCRFLNNSSF Trigger: AAACGACGAGTTATTCAAAAACCGGCACAGGCCCCAGTTGTCTTTCAAAAGCTCTGATTTACTGCATATTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000635227.1 |
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| CDS CAA 72 bp | GAATACCAGCATCCACTCAGACTTTTCCTACACATATaGGCTCCTGTAGAAAGTAAATTGAAAGGAAACGGG | + |
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Preference number: 6 (lower is better) Translates to: EYQHPLRLFLHI*APVESKLKGNG Trigger: CCCGTTTCCTTTCAATTTACTTTCTACAGGAGCCAATATGTGTAGGAAAAGTCTGAGTGGATGCTGGTATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427276.1 |
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