Pregenerated sensors for LINC01107 (Homo sapiens)
Ensembl gene IDs: ENSG00000225493Ensembl transcript IDs: ENST00000446979.1
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TCTCTTGCGTTCGAGCAAGACCCCAGGCAGCGGCATGGAGGTCGGTaGAGCTGGACAGGCGCTTCCGTCAGGAGCTGGGAGGCGTGGGGG | + |
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Preference number: 5 (lower is better) Translates to: SLAFEQDPRQRHGGR*SWTGASVRSWEAWG Trigger: CCCCCACGCCTCCCAGCTCCTGACGGAAGCGCCTGTCCAGCTTCACCGACCTCCATGCCGCTGCCTGGGGTCTTGCTCGAACGCAAGAGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS CCA 90 bp | GGGACAGTCCCCTCAACCAGGTTGGTGGCCACCCTGTCTGGGTGTTaGGTGCCAGGCACTCGACTCCACTGGGCAGCAGAGGGGACAGAG | + |
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Preference number: 5 (lower is better) Translates to: GTVPSTRLVATLSGC*VPGTRLHWAAEGTE Trigger: CTCTGTCCCCTCTGCTGCCCAGTGGAGTCGAGTGCCTGGCACCCAACACCCAGACAGGGTGGCCACCAACCTGGTTGAGGGGACTGTCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS GCA 90 bp | CAGCCCCCGATCCCTGGCACTTCTGGGCATAGAGGACGCCTTGGCTaGTTCAGGGGTTGGCCTCAGCTACTCTTCCGGCCGTACTGGGAG | + |
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Preference number: 5 (lower is better) Translates to: QPPIPGTSGHRGRLG*FRGWPQLLFRPYWE Trigger: CTCCCAGTACGGCCGGAAGAGTAGCTGAGGCCAACCCCTGAAGCAGCCAAGGCGTCCTCTATGCCCAGAAGTGCCAGGGATCGGGGGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS GCA 90 bp | GTGCGAGCTGCTCCCGGAGCTCCTGGGATCAGATTCCAGGGGATGTaGTCCAGCCCAGTGGGGGCAAGTCTGCAGGGCCACATTCAGACG | + |
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Preference number: 5 (lower is better) Translates to: VRAAPGAPGIRFQGM*SSPVGASLQGHIQT Trigger: CGTCTGAATGTGGCCCTGCAGACTTGCCCCCACTGGGCTGGAGCACATCCCCTGGAATCTGATCCCAGGAGCTCCGGGAGCAGCTCGCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS CCA 90 bp | CATCTTGGGGACAGTCCCCTCAACCAGGTTGGTGGCCACCCTGTCTaGGTGTTGGGTGCCAGGCACTCGACTCCACTGGGCAGCAGAGGG | + |
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Preference number: 5 (lower is better) Translates to: HLGDSPLNQVGGHPV*VLGARHSTPLGSRG Trigger: CCCTCTGCTGCCCAGTGGAGTCGAGTGCCTGGCACCCAACACCCAGACAGGGTGGCCACCAACCTGGTTGAGGGGACTGTCCCCAAGATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS CCA 90 bp | CCGGAGCTCCTGGGATCAGATTCCAGGGGATGTGCTCCAGCCCAGTaGGGGCAAGTCTGCAGGGCCACATTCAGACGTGACAGCACCGGG | + |
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Preference number: 5 (lower is better) Translates to: PELLGSDSRGCAPAQ*GQVCRATFRRDSTG Trigger: CCCGGTGCTGTCACGTCTGAATGTGGCCCTGCAGACTTGCCCCCACTGGGCTGGAGCACATCCCCTGGAATCTGATCCCAGGAGCTCCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS TCA 90 bp | GTGAGGTGTGAGACTCGGAGCTGGCCTTTCCTGTCTCTCCCACTGTaGGGGGCATCCATGGAGCTGTGTGCGAGCTGCTCCCGGAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: VRCETRSWPFLSLPL*GASMELCASCSRSS Trigger: GGAGCTCCGGGAGCAGCTCGCACACAGCTCCATGGATGCCCCTCACAGTGGGAGAGACAGGAAAGGCCAGCTCCGAGTCTCACACCTCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS CCA 90 bp | CCTGGCACTTCTGGGCATAGAGGACGCCTTGGCTGCTTCAGGGGTTaGCCTCAGCTACTCTTCCGGCCGTACTGGGAGCGAGGCAGGCTT | + |
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Preference number: 5 (lower is better) Translates to: PGTSGHRGRLGCFRG*PQLLFRPYWERGRL Trigger: AAGCCTGCCTCGCTCCCAGTACGGCCGGAAGAGTAGCTGAGGCCAACCCCTGAAGCAGCCAAGGCGTCCTCTATGCCCAGAAGTGCCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS CCA 90 bp | AGACCCGTGTTCTCTTGCGTTCGAGCAAGACCCCAGGCAGCGGCATaGAGGTCGGTGAAGCTGGACAGGCGCTTCCGTCAGGAGCTGGGA | + |
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Preference number: 5 (lower is better) Translates to: RPVFSCVRARPQAAA*RSVKLDRRFRQELG Trigger: TCCCAGCTCCTGACGGAAGCGCCTGTCCAGCTTCACCGACCTCCATGCCGCTGCCTGGGGTCTTGCTCGAACGCAAGAGAACACGGGTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS TCA 90 bp | GCCCTGGGAGAGGCTCTTGCAGGGAGGAGGGAGTCTGGCATACCGTaGAGGACAAACAGTGAAGTGGCTGCGCCTGCAACGTCAGACTGG | + |
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Preference number: 5 (lower is better) Translates to: ALGEALAGRRESGIP*RTNSEVAAPATSDW Trigger: CCAGTCTGACGTTGCAGGCGCAGCCACTTCACTGTTTGTCCTTCACGGTATGCCAGACTCCCTCCTCCCTGCAAGAGCCTCTCCCAGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS CCA 90 bp | CAGGGAGGAGGGAGTCTGGCATACCGTGAAGGACAAACAGTGAAGTaGCTGCGCCTGCAACGTCAGACTGGCCTTCCAGAAGAGTGGCCA | + |
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Preference number: 5 (lower is better) Translates to: QGGGSLAYREGQTVK*LRLQRQTGLPEEWP Trigger: TGGCCACTCTTCTGGAAGGCCAGTCTGACGTTGCAGGCGCAGCCACTTCACTGTTTGTCCTTCACGGTATGCCAGACTCCCTCCTCCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS TCA 90 bp | GCCTGGGAGGAGGGATCTGAAAGTCCAGACACCATACGCAGGGAATaGAATATTCCCCCGAATTCCGGGAACACACCAGCTCCCAGCGTC | + |
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Preference number: 5 (lower is better) Translates to: AWEEGSESPDTIRRE*NIPPNSGNTPAPSV Trigger: GACGCTGGGAGCTGGTGTGTTCCCGGAATTCGGGGGAATATTTCATTCCCTGCGTATGGTGTCTGGACTTTCAGATCCCTCCTCCCAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS CCA 90 bp | CCGAATTCCGGGAACACACCAGCTCCCAGCGTCGAGGTTCCCATCTaGAGGGTCTCACCTCCCAAGGTAACAGCATCATTTTCCCAGCTT | + |
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Preference number: 5 (lower is better) Translates to: PNSGNTPAPSVEVPI*RVSPPKVTASFSQL Trigger: AAGCTGGGAAAATGATGCTGTTACCTTGGGAGGTGAGACCCTCCAGATGGGAACCTCGACGCTGGGAGCTGGTGTGTTCCCGGAATTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS TCA 90 bp | CTGGAGGGTCTCACCTCCCAAGGTAACAGCATCATTTTCCCAGCTTaGAGAGTGAGGTGTGAGACTCGGAGCTGGCCTTTCCTGTCTCTC | + |
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Preference number: 5 (lower is better) Translates to: LEGLTSQGNSIIFPA*RVRCETRSWPFLSL Trigger: GAGAGACAGGAAAGGCCAGCTCCGAGTCTCACACCTCACTCTTCAAGCTGGGAAAATGATGCTGTTACCTTGGGAGGTGAGACCCTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS TCA 90 bp | GTCTCACCTCCCAAGGTAACAGCATCATTTTCCCAGCTTGAAGAGTaGGGTGTGAGACTCGGAGCTGGCCTTTCCTGTCTCTCCCACTGT | + |
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Preference number: 5 (lower is better) Translates to: VSPPKVTASFSQLEE*GVRLGAGLSCLSHC Trigger: ACAGTGGGAGAGACAGGAAAGGCCAGCTCCGAGTCTCACACCTCACTCTTCAAGCTGGGAAAATGATGCTGTTACCTTGGGAGGTGAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS TCA 90 bp | GCATGGGGTTGTGAAATGATGCCTGGGTGCCTGGGAGGAGGGATCTaGAAGTCCAGACACCATACGCAGGGAATGAAATATTCCCCCGAA | + |
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Preference number: 5 (lower is better) Translates to: AWGCEMMPGCLGGGI*KSRHHTQGMKYSPE Trigger: TTCGGGGGAATATTTCATTCCCTGCGTATGGTGTCTGGACTTTCAGATCCCTCCTCCCAGGCACCCAGGCATCATTTCACAACCCCATGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS CCA 90 bp | GCCCTAATTTCTCCTCTTTCTTTCCTAGTGGGGCTGATGGCGCAGTaGGAAGAGTTTGACTGTCCAGATAGCCTAGTCCCAGACCCCAGA | + |
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Preference number: 5 (lower is better) Translates to: ALISPLSFLVGLMAQ*EEFDCPDSLVPDPR Trigger: TCTGGGGTCTGGGACTAGGCTATCTGGACAGTCAAACTCTTCCCACTGCGCCATCAGCCCCACTAGGAAAGAAAGAGGAGAAATTAGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS CCA 90 bp | ATCTTGGTCCATTTGGGCTACCGTAACAAAATACCGTACACGGCGTaGCTTAGGAGCATCAGGAATGTGTGGCTCACAGTTCTGGAAGAC | + |
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Preference number: 5 (lower is better) Translates to: ILVHLGYRNKIPYTA*LRSIRNVWLTVLED Trigger: GTCTTCCAGAACTGTGAGCCACACATTCCTGATGCTCCTAAGCCACGCCGTGTACGGTATTTTGTTACGGTAGCCCAAATGGACCAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS TCA 90 bp | TTGGGGATGAGGATTCCAGCATGTCCGTTTGCGGGGGACATATTCTaGCCGTTGAACTCTTTAAAGCAAAGCCCTAATTTCTCCTCTTTC | + |
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Preference number: 5 (lower is better) Translates to: LGMRIPACPFAGDIF*PLNSLKQSPNFSSF Trigger: GAAAGAGGAGAAATTAGGGCTTTGCTTTAAAGAGTTCAACGGTCAGAATATGTCCCCCGCAAACGGACATGCTGGAATCCTCATCCCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS TCA 72 bp | CCAGTGGGGGCAAGTCTGCAGGGCCACATTCAGACGTaGCAGCACCGGGGAGGGCCACACCGTGCATGGCCC | + |
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Preference number: 6 (lower is better) Translates to: PVGASLQGHIQT*QHRGGPHRAWP Trigger: GGGCCATGCACGGTGTGGCCCTCCCCGGTGCTGTCACGTCTGAATGTGGCCCTGCAGACTTGCCCCCACTGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS GCA 72 bp | CCTCTCGGGGGAGGACTGGGCCCTGGGAGAGGCTCTTaGAGGGAGGAGGGAGTCTGGCATACCGTGAAGGAC | + |
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Preference number: 6 (lower is better) Translates to: PLGGGLGPGRGS*REEGVWHTVKD Trigger: GTCCTTCACGGTATGCCAGACTCCCTCCTCCCTGCAAGAGCCTCTCCCAGGGCCCAGTCCTCCCCCGAGAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS GCA 72 bp | GGGGCAGAGGAGCCCTCAACGAGACCCGTGTTCTCTTaGGTTCGAGCAAGACCCCAGGCAGCGGCATGGAGG | + |
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Preference number: 6 (lower is better) Translates to: GAEEPSTRPVFS*VRARPQAAAWR Trigger: CCTCCATGCCGCTGCCTGGGGTCTTGCTCGAACGCAAGAGAACACGGGTCTCGTTGAGGGCTCCTCTGCCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS CCA 72 bp | CCCTCAACCAGGTTGGTGGCCACCCTGTCTGGGTGTTaGGTGCCAGGCACTCGACTCCACTGGGCAGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: PSTRLVATLSGC*VPGTRLHWAAE Trigger: CTCTGCTGCCCAGTGGAGTCGAGTGCCTGGCACCCAACACCCAGACAGGGTGGCCACCAACCTGGTTGAGGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS CCA 72 bp | GACAGTCCCCTCAACCAGGTTGGTGGCCACCCTGTCTaGGTGTTGGGTGCCAGGCACTCGACTCCACTGGGC | + |
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Preference number: 6 (lower is better) Translates to: DSPLNQVGGHPV*VLGARHSTPLG Trigger: GCCCAGTGGAGTCGAGTGCCTGGCACCCAACACCCAGACAGGGTGGCCACCAACCTGGTTGAGGGGACTGTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS CCA 72 bp | GGGCAGGGCACCCCCGAGAGGCCACCTGGGGTTGGCTaGCAGATGGTTCCATACTCCACTCTCATCAGCACC | + |
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Preference number: 6 (lower is better) Translates to: GQGTPERPPGVG*QMVPYSTLIST Trigger: GGTGCTGATGAGAGTGGAGTATGGAACCATCTGCCAGCCAACCCCAGGTGGCCTCTCGGGGGTGCCCTGCCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS CAA 72 bp | CCCCTCAACCAGGTTGGTGGCCACCCTGTCTGGGTGTaGGGTGCCAGGCACTCGACTCCACTGGGCAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: PLNQVGGHPVWV*GARHSTPLGSR Trigger: TCTGCTGCCCAGTGGAGTCGAGTGCCTGGCACCCAACACCCAGACAGGGTGGCCACCAACCTGGTTGAGGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS CAA 72 bp | CGGGGCAGAGGAGCCCTCAACGAGACCCGTGTTCTCTaGCGTTCGAGCAAGACCCCAGGCAGCGGCATGGAG | + |
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Preference number: 6 (lower is better) Translates to: RGRGALNETRVL*RSSKTPGSGME Trigger: CTCCATGCCGCTGCCTGGGGTCTTGCTCGAACGCAAGAGAACACGGGTCTCGTTGAGGGCTCCTCTGCCCCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS CAA 90 bp | CTGGGCAGCCCCCGATCCCTGGCACTTCTGGGCATAGAGGACGCCTaGGCTGCTTCAGGGGTTGGCCTCAGCTACTCTTCCGGCCGTACT | + |
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Preference number: 6 (lower is better) Translates to: LGSPRSLALLGIEDA*AASGVGLSYSSGRT Trigger: AGTACGGCCGGAAGAGTAGCTGAGGCCAACCCCTGAAGCAGCCAAGGCGTCCTCTATGCCCAGAAGTGCCAGGGATCGGGGGCTGCCCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS GCA 72 bp | TGGGCAGCAGAGGGGACAGAGCTTCTAGGTCCAGACTaGCGCGCACAGATGAGGCAGGTAGAATGGCGGCCC | + |
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Preference number: 6 (lower is better) Translates to: WAAEGTELLGPD*RAQMRQVEWRP Trigger: GGGCCGCCATTCTACCTGCCTCATCTGTGCGCGGCAGTCTGGACCTAGAAGCTCTGTCCCCTCTGCTGCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS CCA 72 bp | GCACCCCCGAGAGGCCACCTGGGGTTGGCTGGCAGATaGTTCCATACTCCACTCTCATCAGCACCTCTCGGG | + |
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Preference number: 6 (lower is better) Translates to: APPRGHLGLAGR*FHTPLSSAPLG Trigger: CCCGAGAGGTGCTGATGAGAGTGGAGTATGGAACCATCTGCCAGCCAACCCCAGGTGGCCTCTCGGGGGTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS GCA 72 bp | ATCCCTGGCACTTCTGGGCATAGAGGACGCCTTGGCTaGTTCAGGGGTTGGCCTCAGCTACTCTTCCGGCCG | + |
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Preference number: 6 (lower is better) Translates to: IPGTSGHRGRLG*FRGWPQLLFRP Trigger: CGGCCGGAAGAGTAGCTGAGGCCAACCCCTGAAGCAGCCAAGGCGTCCTCTATGCCCAGAAGTGCCAGGGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS GCA 72 bp | GTCTCTCCCACTGTGAGGGGCATCCATGGAGCTGTGTaGGAGCTGCTCCCGGAGCTCCTGGGATCAGATTCC | + |
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Preference number: 6 (lower is better) Translates to: VSPTVRGIHGAV*ELLPELLGSDS Trigger: GGAATCTGATCCCAGGAGCTCCGGGAGCAGCTCGCACACAGCTCCATGGATGCCCCTCACAGTGGGAGAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS CCA 72 bp | TCTGGGCATAGAGGACGCCTTGGCTGCTTCAGGGGTTaGCCTCAGCTACTCTTCCGGCCGTACTGGGAGCGA | + |
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Preference number: 6 (lower is better) Translates to: SGHRGRLGCFRG*PQLLFRPYWER Trigger: TCGCTCCCAGTACGGCCGGAAGAGTAGCTGAGGCCAACCCCTGAAGCAGCCAAGGCGTCCTCTATGCCCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS CCA 72 bp | TTCTCTTGCGTTCGAGCAAGACCCCAGGCAGCGGCATaGAGGTCGGTGAAGCTGGACAGGCGCTTCCGTCAG | + |
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Preference number: 6 (lower is better) Translates to: FSCVRARPQAAA*RSVKLDRRFRQ Trigger: CTGACGGAAGCGCCTGTCCAGCTTCACCGACCTCCATGCCGCTGCCTGGGGTCTTGCTCGAACGCAAGAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS CCA 72 bp | TCCATGGAGCTGTGTGCGAGCTGCTCCCGGAGCTCCTaGGATCAGATTCCAGGGGATGTGCTCCAGCCCAGT | + |
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Preference number: 6 (lower is better) Translates to: SMELCASCSRSS*DQIPGDVLQPS Trigger: ACTGGGCTGGAGCACATCCCCTGGAATCTGATCCCAGGAGCTCCGGGAGCAGCTCGCACACAGCTCCATGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS CAA 72 bp | CCCCGATCCCTGGCACTTCTGGGCATAGAGGACGCCTaGGCTGCTTCAGGGGTTGGCCTCAGCTACTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: PRSLALLGIEDA*AASGVGLSYSS Trigger: GGAAGAGTAGCTGAGGCCAACCCCTGAAGCAGCCAAGGCGTCCTCTATGCCCAGAAGTGCCAGGGATCGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS CCA 72 bp | CTGGGATCAGATTCCAGGGGATGTGCTCCAGCCCAGTaGGGGCAAGTCTGCAGGGCCACATTCAGACGTGAC | + |
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Preference number: 6 (lower is better) Translates to: LGSDSRGCAPAQ*GQVCRATFRRD Trigger: GTCACGTCTGAATGTGGCCCTGCAGACTTGCCCCCACTGGGCTGGAGCACATCCCCTGGAATCTGATCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS CCA 72 bp | CCGTACACGGCGTGGCTTAGGAGCATCAGGAATGTGTaGCTCACAGTTCTGGAAGACGGAGGTCCGAGGTCG | + |
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Preference number: 6 (lower is better) Translates to: PYTAWLRSIRNV*LTVLEDGGPRS Trigger: CGACCTCGGACCTCCGTCTTCCAGAACTGTGAGCCACACATTCCTGATGCTCCTAAGCCACGCCGTGTACGG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS CAA 72 bp | ACCTCATCACCTCCTAATGTGAGGCCCCGCCCTCACTaGGGGATGAGGATTCCAGCATGTCCGTTTGCGGGG | + |
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Preference number: 6 (lower is better) Translates to: TSSPPNVRPRPH*GMRIPACPFAG Trigger: CCCCGCAAACGGACATGCTGGAATCCTCATCCCCAAGTGAGGGCGGGGCCTCACATTAGGAGGTGATGAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS CCA 72 bp | GGGAGTCTGGCATACCGTGAAGGACAAACAGTGAAGTaGCTGCGCCTGCAACGTCAGACTGGCCTTCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: GSLAYREGQTVK*LRLQRQTGLPE Trigger: TTCTGGAAGGCCAGTCTGACGTTGCAGGCGCAGCCACTTCACTGTTTGTCCTTCACGGTATGCCAGACTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS TCA 72 bp | CTCACCTCCCAAGGTAACAGCATCATTTTCCCAGCTTaGAGAGTGAGGTGTGAGACTCGGAGCTGGCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: LTSQGNSIIFPA*RVRCETRSWPF Trigger: GAAAGGCCAGCTCCGAGTCTCACACCTCACTCTTCAAGCTGGGAAAATGATGCTGTTACCTTGGGAGGTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS CCA 72 bp | TCTCCTCTTTCTTTCCTAGTGGGGCTGATGGCGCAGTaGGAAGAGTTTGACTGTCCAGATAGCCTAGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: SPLSFLVGLMAQ*EEFDCPDSLVP Trigger: TGGGACTAGGCTATCTGGACAGTCAAACTCTTCCCACTGCGCCATCAGCCCCACTAGGAAAGAAAGAGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS TCA 72 bp | GAGGGATCTGAAAGTCCAGACACCATACGCAGGGAATaGAATATTCCCCCGAATTCCGGGAACACACCAGCT | + |
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Preference number: 6 (lower is better) Translates to: EGSESPDTIRRE*NIPPNSGNTPA Trigger: AGCTGGTGTGTTCCCGGAATTCGGGGGAATATTTCATTCCCTGCGTATGGTGTCTGGACTTTCAGATCCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS CAA 90 bp | ATGCGTGGAATCTCACAAGCACCTTTAGCTCCTATCTTGGTCCATTaGGGCTACCGTAACAAAATACCGTACACGGCGTGGCTTAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: MRGISQAPLAPILVH*GYRNKIPYTAWLRS Trigger: GCTCCTAAGCCACGCCGTGTACGGTATTTTGTTACGGTAGCCCAAATGGACCAAGATAGGAGCTAAAGGTGCTTGTGAGATTCCACGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS TCA 72 bp | TGTGAAATGATGCCTGGGTGCCTGGGAGGAGGGATCTaGAAGTCCAGACACCATACGCAGGGAATGAAATAT | + |
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Preference number: 6 (lower is better) Translates to: CEMMPGCLGGGI*KSRHHTQGMKY Trigger: ATATTTCATTCCCTGCGTATGGTGTCTGGACTTTCAGATCCCTCCTCCCAGGCACCCAGGCATCATTTCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS CCA 72 bp | CATTTGGGCTACCGTAACAAAATACCGTACACGGCGTaGCTTAGGAGCATCAGGAATGTGTGGCTCACAGTT | + |
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Preference number: 6 (lower is better) Translates to: HLGYRNKIPYTA*LRSIRNVWLTV Trigger: AACTGTGAGCCACACATTCCTGATGCTCCTAAGCCACGCCGTGTACGGTATTTTGTTACGGTAGCCCAAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS TCA 72 bp | AGGATTCCAGCATGTCCGTTTGCGGGGGACATATTCTaGCCGTTGAACTCTTTAAAGCAAAGCCCTAATTTC | + |
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Preference number: 6 (lower is better) Translates to: RIPACPFAGDIF*PLNSLKQSPNF Trigger: GAAATTAGGGCTTTGCTTTAAAGAGTTCAACGGTCAGAATATGTCCCCCGCAAACGGACATGCTGGAATCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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| CDS CAA 72 bp | ATGCGTGGAATCTCACAAGCACCTTTAGCTCCTATCTaGGTCCATTTGGGCTACCGTAACAAAATACCGTAC | + |
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Preference number: 6 (lower is better) Translates to: MRGISQAPLAPI*VHLGYRNKIPY Trigger: GTACGGTATTTTGTTACGGTAGCCCAAATGGACCAAGATAGGAGCTAAAGGTGCTTGTGAGATTCCACGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000446979.1 |
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