RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for LINC01103 (Homo sapiens)

Ensembl gene IDs: ENSG00000234781

Ensembl transcript IDs: ENST00000430551.2

Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp TGGGCTCTGGGAAGTGGTGGTCTGGCCAGTGGCCCCGGTGGTGGCTaGAGTTGCATGAATGGTGTTTACACTGTAGTGATGGTGTCTGCG +
Preference number: 5 (lower is better)
Translates to: WALGSGGLASGPGGG*SCMNGVYTVVMVSA
Trigger: CGCAGACACCATCACTACAGTGTAAACACCATTCATGCAACTGCAGCCACCACCGGGGCCACTGGCCAGACCACCACTTCCCAGAGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430551.2
CDS CCA 90 bp TGGTGGTCTGGCCAGTGGCCCCGGTGGTGGCTGCAGTTGCATGAATaGTGTTTACACTGTAGTGATGGTGTCTGCGTCACCTCCAGCGGA +
Preference number: 5 (lower is better)
Translates to: WWSGQWPRWWLQLHE*CLHCSDGVCVTSSG
Trigger: TCCGCTGGAGGTGACGCAGACACCATCACTACAGTGTAAACACCATTCATGCAACTGCAGCCACCACCGGGGCCACTGGCCAGACCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430551.2
CDS GCA 90 bp CTGGGAAGTGGTGGTCTGGCCAGTGGCCCCGGTGGTGGCTGCAGTTaGATGAATGGTGTTTACACTGTAGTGATGGTGTCTGCGTCACCT +
Preference number: 5 (lower is better)
Translates to: LGSGGLASGPGGGCS*MNGVYTVVMVSASP
Trigger: AGGTGACGCAGACACCATCACTACAGTGTAAACACCATTCATGCAACTGCAGCCACCACCGGGGCCACTGGCCAGACCACCACTTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430551.2
CDS CCA 90 bp CAGTATCTGGGCTCTGGGAAGTGGTGGTCTGGCCAGTGGCCCCGGTaGTGGCTGCAGTTGCATGAATGGTGTTTACACTGTAGTGATGGT +
Preference number: 5 (lower is better)
Translates to: QYLGSGKWWSGQWPR*WLQLHEWCLHCSDG
Trigger: ACCATCACTACAGTGTAAACACCATTCATGCAACTGCAGCCACCACCGGGGCCACTGGCCAGACCACCACTTCCCAGAGCCCAGATACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430551.2
CDS GCA 90 bp TGGCTGCAGTTGCATGAATGGTGTTTACACTGTAGTGATGGTGTCTaGGTCACCTCCAGCGGACAAGCTCTACCCACACCCAGATTCATC +
Preference number: 5 (lower is better)
Translates to: WLQLHEWCLHCSDGV*VTSSGQALPTPRFI
Trigger: GATGAATCTGGGTGTGGGTAGAGCTTGTCCGCTGGAGGTGACGCAGACACCATCACTACAGTGTAAACACCATTCATGCAACTGCAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430551.2
CDS GCA 90 bp ACGTTGAGTAGGCTGCTTGGGAGGAGGAAGAAGAGGAGTGGGTCTTaGTATCTCACGGGTGGCAGAGATGGAAGAAAATCCATCTATAAG +
Preference number: 5 (lower is better)
Translates to: TLSRLLGRRKKRSGS*YLTGGRDGRKSIYK
Trigger: CTTATAGATGGATTTTCTTCCATCTCTGCCACCCGTGAGATAGCAAGACCCACTCCTCTTCTTCCTCCTCCCAAGCAGCCTACTCAACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430551.2
CDS CCA 72 bp GGCTCTGGGAAGTGGTGGTCTGGCCAGTGGCCCCGGTaGTGGCTGCAGTTGCATGAATGGTGTTTACACTGT +
Preference number: 6 (lower is better)
Translates to: GSGKWWSGQWPR*WLQLHEWCLHC
Trigger: ACAGTGTAAACACCATTCATGCAACTGCAGCCACCACCGGGGCCACTGGCCAGACCACCACTTCCCAGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430551.2
CDS CAA 90 bp TCTGGGAAGTGGTGGTCTGGCCAGTGGCCCCGGTGGTGGCTGCAGTaGCATGAATGGTGTTTACACTGTAGTGATGGTGTCTGCGTCACC +
Preference number: 6 (lower is better)
Translates to: SGKWWSGQWPRWWLQ*HEWCLHCSDGVCVT
Trigger: GGTGACGCAGACACCATCACTACAGTGTAAACACCATTCATGCAACTGCAGCCACCACCGGGGCCACTGGCCAGACCACCACTTCCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430551.2
CDS CCA 72 bp GGCCAGTGGCCCCGGTGGTGGCTGCAGTTGCATGAATaGTGTTTACACTGTAGTGATGGTGTCTGCGTCACC +
Preference number: 6 (lower is better)
Translates to: GQWPRWWLQLHE*CLHCSDGVCVT
Trigger: GGTGACGCAGACACCATCACTACAGTGTAAACACCATTCATGCAACTGCAGCCACCACCGGGGCCACTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430551.2
CDS GCA 72 bp GGTGGTCTGGCCAGTGGCCCCGGTGGTGGCTGCAGTTaGATGAATGGTGTTTACACTGTAGTGATGGTGTCT +
Preference number: 6 (lower is better)
Translates to: GGLASGPGGGCS*MNGVYTVVMVS
Trigger: AGACACCATCACTACAGTGTAAACACCATTCATGCAACTGCAGCCACCACCGGGGCCACTGGCCAGACCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430551.2
CDS GCA 72 bp GGAAGTGGTGGTCTGGCCAGTGGCCCCGGTGGTGGCTaGAGTTGCATGAATGGTGTTTACACTGTAGTGATG +
Preference number: 6 (lower is better)
Translates to: GSGGLASGPGGG*SCMNGVYTVVM
Trigger: CATCACTACAGTGTAAACACCATTCATGCAACTGCAGCCACCACCGGGGCCACTGGCCAGACCACCACTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430551.2
CDS CAA 72 bp TGGTGGTCTGGCCAGTGGCCCCGGTGGTGGCTGCAGTaGCATGAATGGTGTTTACACTGTAGTGATGGTGTC +
Preference number: 6 (lower is better)
Translates to: WWSGQWPRWWLQ*HEWCLHCSDGV
Trigger: GACACCATCACTACAGTGTAAACACCATTCATGCAACTGCAGCCACCACCGGGGCCACTGGCCAGACCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430551.2
CDS GCA 72 bp TTGCATGAATGGTGTTTACACTGTAGTGATGGTGTCTaGGTCACCTCCAGCGGACAAGCTCTACCCACACCC +
Preference number: 6 (lower is better)
Translates to: LHEWCLHCSDGV*VTSSGQALPTP
Trigger: GGGTGTGGGTAGAGCTTGTCCGCTGGAGGTGACGCAGACACCATCACTACAGTGTAAACACCATTCATGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430551.2
CDS CAA 90 bp TGGAAGAGGATCATCATAAAGGTCTTCATCTTTGTAGTCTTCACGTaGAGTAGGCTGCTTGGGAGGAGGAAGAAGAGGAGTGGGTCTTGC +
Preference number: 6 (lower is better)
Translates to: WKRIIIKVFIFVVFT*SRLLGRRKKRSGSC
Trigger: GCAAGACCCACTCCTCTTCTTCCTCCTCCCAAGCAGCCTACTCAACGTGAAGACTACAAAGATGAAGACCTTTATGATGATCCTCTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430551.2
CDS CAA 90 bp AGAAGTCTGCAGTTCCAGAGTACAGCCTTCCAGAAAGTTCCTTCTTaGTTGTGTGTGAAGGATCTATTTTCACAAAATCCAGCGAGGTGG +
Preference number: 6 (lower is better)
Translates to: RSLQFQSTAFQKVPS*LCVKDLFSQNPARW
Trigger: CCACCTCGCTGGATTTTGTGAAAATAGATCCTTCACACACAACAAAGAAGGAACTTTCTGGAAGGCTGTACTCTGGAACTGCAGACTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430551.2
CDS CAA 72 bp ATCATCATAAAGGTCTTCATCTTTGTAGTCTTCACGTaGAGTAGGCTGCTTGGGAGGAGGAAGAAGAGGAGT +
Preference number: 6 (lower is better)
Translates to: IIIKVFIFVVFT*SRLLGRRKKRS
Trigger: ACTCCTCTTCTTCCTCCTCCCAAGCAGCCTACTCAACGTGAAGACTACAAAGATGAAGACCTTTATGATGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430551.2
CDS TCA 72 bp GTACAGCCTTCCAGAAAGTTCCTTCTTTGTTGTGTGTaGAGGATCTATTTTCACAAAATCCAGCGAGGTGGA +
Preference number: 6 (lower is better)
Translates to: VQPSRKFLLCCV*RIYFHKIQRGG
Trigger: TCCACCTCGCTGGATTTTGTGAAAATAGATCCTTCACACACAACAAAGAAGGAACTTTCTGGAAGGCTGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430551.2
CDS CAA 72 bp AAATTGGGATCGTTTCTCTTCCACATCCCTTTTCTGTaGAAGTCATCTAGTAAGATGATTTTGCCACAGGAG +
Preference number: 6 (lower is better)
Translates to: KLGSFLFHIPFL*KSSSKMILPQE
Trigger: CTCCTGTGGCAAAATCATCTTACTAGATGACTTCAACAGAAAAGGGATGTGGAAGAGAAACGATCCCAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000430551.2
CDS TCA 72 bp GTGCCTGCAGCTGCGTGGTCATTGATAAATTGGCTATaGATTGCTGAAATACTTCATATGAATATAAACATT +
Preference number: 6 (lower is better)
Translates to: VPAAAWSLINWL*IAEILHMNINI
Trigger: AATGTTTATATTCATATGAAGTATTTCAGCAATTCATAGCCAATTTATCAATGACCACGCAGCTGCAGGCAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430551.2
CDS CCA 72 bp TATTCAAAATTCCACATTGCTCATGCAATGGGATATTaGGCTGTCTCACCTAATGTAATTCTACAAAGCTAT +
Preference number: 6 (lower is better)
Translates to: YSKFHIAHAMGY*AVSPNVILQSY
Trigger: ATAGCTTTGTAGAATTACATTAGGTGAGACAGCCCAATATCCCATTGCATGAGCAATGTGGAATTTTGAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430551.2