Pregenerated sensors for LINC01101 (Homo sapiens)
Ensembl gene IDs: ENSG00000280409Ensembl transcript IDs: ENST00000622953.1
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCCCCGGCTGGTGATGGGGGCTTAGACACGTGTATGGTCCATTGCTaGCCTCCAGGGATGAGGCTCATCTCAGGACCGTGCCCTGGCTTC | + |
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Preference number: 5 (lower is better) Translates to: APAGDGGLDTCMVHC*PPGMRLISGPCPGF Trigger: GAAGCCAGGGCACGGTCCTGAGATGAGCCTCATCCCTGGAGGGCAGCAATGGACCATACACGTGTCTAAGCCCCCATCACCAGCCGGGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000622953.1 |
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| CDS GCA 90 bp | AGTCAGGGCCACCCAAACACAGGAGTCCTGACTCCCAGACACTCATaGACTGGCGGGGCAGGGCCTACACTGTCTTCCCTGCTTCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: SQGHPNTGVLTPRHS*TGGAGPTLSSLLPR Trigger: CCTGGGAAGCAGGGAAGACAGTGTAGGCCCTGCCCCGCCAGTGCATGAGTGTCTGGGAGTCAGGACTCCTGTGTTTGGGTGGCCCTGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622953.1 |
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| CDS TCA 90 bp | CACCAAGAGGCTGAGTCACTTGCCCAAGATTGGGCCTCTGGTGAGTaGCAGGCAATTGGACCGGTCAGGGTGACCCGGGGCATGCGGTCT | + |
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Preference number: 5 (lower is better) Translates to: HQEAESLAQDWASGE*QAIGPVRVTRGMRS Trigger: AGACCGCATGCCCCGGGTCACCCTGACCGGTCCAATTGCCTGTCACTCACCAGAGGCCCAATCTTGGGCAAGTGACTCAGCCTCTTGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622953.1 |
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| CDS CCA 90 bp | GGGCCACCCAAACACAGGAGTCCTGACTCCCAGACACTCATGCACTaGCGGGGCAGGGCCTACACTGTCTTCCCTGCTTCCCAGGAAGAT | + |
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Preference number: 5 (lower is better) Translates to: GPPKHRSPDSQTLMH*RGRAYTVFPASQED Trigger: ATCTTCCTGGGAAGCAGGGAAGACAGTGTAGGCCCTGCCCCGCCAGTGCATGAGTGTCTGGGAGTCAGGACTCCTGTGTTTGGGTGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622953.1 |
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| CDS CCA 90 bp | CCGTCACAGCTCAGTCAGGGCCCCAGGAAGGACAATCCCATGGCTTaGGGTGTTGGGAAGTTTGCCTTCATTCAGTCCTGCGAAGCCTCG | + |
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Preference number: 5 (lower is better) Translates to: PSQLSQGPRKDNPMA*GVGKFAFIQSCEAS Trigger: CGAGGCTTCGCAGGACTGAATGAAGGCAAACTTCCCAACACCCCAAGCCATGGGATTGTCCTTCCTGGGGCCCTGACTGAGCTGTGACGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622953.1 |
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| CDS CCA 90 bp | GGATGGTCGTGGCTCCTGTGTTCCCCACCAACCAGCAGGGGCACCTaGGGAAACCTCCAGTGCAGAAATCGTACTCTGCCATTTCCTGTA | + |
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Preference number: 5 (lower is better) Translates to: GWSWLLCSPPTSRGT*GNLQCRNRTLPFPV Trigger: TACAGGAAATGGCAGAGTACGATTTCTGCACTGGAGGTTTCCCCAGGTGCCCCTGCTGGTTGGTGGGGAACACAGGAGCCACGACCATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622953.1 |
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| CDS CCA 90 bp | ACAGCCCGTCACAGCTCAGTCAGGGCCCCAGGAAGGACAATCCCATaGCTTGGGGTGTTGGGAAGTTTGCCTTCATTCAGTCCTGCGAAG | + |
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Preference number: 5 (lower is better) Translates to: TARHSSVRAPGRTIP*LGVLGSLPSFSPAK Trigger: CTTCGCAGGACTGAATGAAGGCAAACTTCCCAACACCCCAAGCCATGGGATTGTCCTTCCTGGGGCCCTGACTGAGCTGTGACGGGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622953.1 |
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| CDS CCA 90 bp | GCCCTCCCTAGATTTTTCTCACGGTCCGAAGGAAGGGCTAGCCCCTaGAGAGCATCTTATCTCTTGTTTGATGGATGGCCCAGAGAGGGT | + |
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Preference number: 5 (lower is better) Translates to: ALPRFFSRSEGRASP*RASYLLFDGWPREG Trigger: ACCCTCTCTGGGCCATCCATCAAACAAGAGATAAGATGCTCTCCAGGGGCTAGCCCTTCCTTCGGACCGTGAGAAAAATCTAGGGAGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000622953.1 |
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| CDS CCA 90 bp | GAGATGGACAGGGGTTTAGGTAGTCCCTCCTCCATCCTGTCCTCATaGATGGATGCCTGTGCCCTCCCTAGATTTTTCTCACGGTCCGAA | + |
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Preference number: 5 (lower is better) Translates to: EMDRGLGSPSSILSS*MDACALPRFFSRSE Trigger: TTCGGACCGTGAGAAAAATCTAGGGAGGGCACAGGCATCCATCCATGAGGACAGGATGGAGGAGGGACTACCTAAACCCCTGTCCATCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000622953.1 |
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| CDS TCA 90 bp | GAGATTTTTCCATGCTTCCGGCTCCGTTGCCCACAAGCTGAACAGTaGCTTGGTGTCAGGGTGGCAAAGAGAATAGGTGCCTTACTGGGA | + |
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Preference number: 5 (lower is better) Translates to: EIFPCFRLRCPQAEQ*LGVRVAKRIGALLG Trigger: TCCCAGTAAGGCACCTATTCTCTTTGCCACCCTGACACCAAGTCACTGTTCAGCTTGTGGGCAACGGAGCCGGAAGCATGGAAAAATCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000622953.1 |
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| CDS TCA 90 bp | GAAATCGTACTCTGCCATTTCCTGTATCTCCAGCTATTCCCCATCTaGAGAGTGAGGTGGTTAGACCAGGTCCCTGGTTTTCTTCCAGTC | + |
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Preference number: 5 (lower is better) Translates to: EIVLCHFLYLQLFPI*RVRWLDQVPGFLPV Trigger: GACTGGAAGAAAACCAGGGACCTGGTCTAACCACCTCACTCTTCAGATGGGGAATAGCTGGAGATACAGGAAATGGCAGAGTACGATTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622953.1 |
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| CDS CCA 72 bp | CAGGACCGTGCCCTGGCTTCTGTCAAGGCGGCTCTGTaGTTGTTCGGGGCCTACTCTGTCCGGCCACAGCTC | + |
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Preference number: 6 (lower is better) Translates to: QDRALASVKAAL*LFGAYSVRPQL Trigger: GAGCTGTGGCCGGACAGAGTAGGCCCCGAACAACCACAGAGCCGCCTTGACAGAAGCCAGGGCACGGTCCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622953.1 |
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| CDS CAA 72 bp | GACCGTGCCCTGGCTTCTGTCAAGGCGGCTCTGTGGTaGTTCGGGGCCTACTCTGTCCGGCCACAGCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: DRALASVKAALW*FGAYSVRPQLW Trigger: CCAGAGCTGTGGCCGGACAGAGTAGGCCCCGAACAACCACAGAGCCGCCTTGACAGAAGCCAGGGCACGGTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622953.1 |
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| CDS CCA 72 bp | CCCTCCAGGGATGAGGCTCATCTCAGGACCGTGCCCTaGCTTCTGTCAAGGCGGCTCTGTGGTTGTTCGGGG | + |
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Preference number: 6 (lower is better) Translates to: PSRDEAHLRTVP*LLSRRLCGCSG Trigger: CCCCGAACAACCACAGAGCCGCCTTGACAGAAGCCAGGGCACGGTCCTGAGATGAGCCTCATCCCTGGAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622953.1 |
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| CDS TCA 72 bp | GCTGAGTCACTTGCCCAAGATTGGGCCTCTGGTGAGTaGCAGGCAATTGGACCGGTCAGGGTGACCCGGGGC | + |
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Preference number: 6 (lower is better) Translates to: AESLAQDWASGE*QAIGPVRVTRG Trigger: GCCCCGGGTCACCCTGACCGGTCCAATTGCCTGTCACTCACCAGAGGCCCAATCTTGGGCAAGTGACTCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622953.1 |
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| CDS GCA 72 bp | CACCCAAACACAGGAGTCCTGACTCCCAGACACTCATaGACTGGCGGGGCAGGGCCTACACTGTCTTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: HPNTGVLTPRHS*TGGAGPTLSSL Trigger: CAGGGAAGACAGTGTAGGCCCTGCCCCGCCAGTGCATGAGTGTCTGGGAGTCAGGACTCCTGTGTTTGGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622953.1 |
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| CDS CAA 90 bp | GGAGGCCTCATGGGGGCCATTTCGCACACCAAGAGGCTGAGTCACTaGCCCAAGATTGGGCCTCTGGTGAGTGACAGGCAATTGGACCGG | + |
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Preference number: 6 (lower is better) Translates to: GGLMGAISHTKRLSH*PKIGPLVSDRQLDR Trigger: CCGGTCCAATTGCCTGTCACTCACCAGAGGCCCAATCTTGGGCAAGTGACTCAGCCTCTTGGTGTGCGAAATGGCCCCCATGAGGCCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000622953.1 |
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| CDS TCA 72 bp | CCTTCATTCAGTCCTGCGAAGCCTCGGAGGAAAGGCTaGGCTTGGTGCTGTCACCCTGTCTCCCTCCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: PSFSPAKPRRKG*AWCCHPVSLQV Trigger: GACCTGGAGGGAGACAGGGTGACAGCACCAAGCTCAGCCTTTCCTCCGAGGCTTCGCAGGACTGAATGAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622953.1 |
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| CDS GCA 72 bp | GGTGATGGGGGCTTAGACACGTGTATGGTCCATTGCTaGCCTCCAGGGATGAGGCTCATCTCAGGACCGTGC | + |
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Preference number: 6 (lower is better) Translates to: GDGGLDTCMVHC*PPGMRLISGPC Trigger: GCACGGTCCTGAGATGAGCCTCATCCCTGGAGGGCAGCAATGGACCATACACGTGTCTAAGCCCCCATCACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000622953.1 |
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| CDS GCA 72 bp | GCTGGTGATGGGGGCTTAGACACGTGTATGGTCCATTaGTGCCCTCCAGGGATGAGGCTCATCTCAGGACCG | + |
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Preference number: 6 (lower is better) Translates to: AGDGGLDTCMVH*CPPGMRLISGP Trigger: CGGTCCTGAGATGAGCCTCATCCCTGGAGGGCAGCAATGGACCATACACGTGTCTAAGCCCCCATCACCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000622953.1 |
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| CDS CCA 72 bp | TGGCTCCTGTGTTCCCCACCAACCAGCAGGGGCACCTaGGGAAACCTCCAGTGCAGAAATCGTACTCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: WLLCSPPTSRGT*GNLQCRNRTLP Trigger: TGGCAGAGTACGATTTCTGCACTGGAGGTTTCCCCAGGTGCCCCTGCTGGTTGGTGGGGAACACAGGAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622953.1 |
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| CDS CCA 72 bp | AAACACAGGAGTCCTGACTCCCAGACACTCATGCACTaGCGGGGCAGGGCCTACACTGTCTTCCCTGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: KHRSPDSQTLMH*RGRAYTVFPAS Trigger: GGAAGCAGGGAAGACAGTGTAGGCCCTGCCCCGCCAGTGCATGAGTGTCTGGGAGTCAGGACTCCTGTGTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622953.1 |
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| CDS CAA 90 bp | GGTCCGAAGGAAGGGCTAGCCCCTGGAGAGCATCTTATCTCTTGTTaGATGGATGGCCCAGAGAGGGTGAGTGGCTTGCCTGGGGCCACA | + |
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Preference number: 6 (lower is better) Translates to: GPKEGLAPGEHLISC*MDGPERVSGLPGAT Trigger: TGTGGCCCCAGGCAAGCCACTCACCCTCTCTGGGCCATCCATCAAACAAGAGATAAGATGCTCTCCAGGGGCTAGCCCTTCCTTCGGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622953.1 |
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| CDS CAA 90 bp | CCCGTCACAGCTCAGTCAGGGCCCCAGGAAGGACAATCCCATGGCTaGGGGTGTTGGGAAGTTTGCCTTCATTCAGTCCTGCGAAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: PVTAQSGPQEGQSHG*GCWEVCLHSVLRSL Trigger: GAGGCTTCGCAGGACTGAATGAAGGCAAACTTCCCAACACCCCAAGCCATGGGATTGTCCTTCCTGGGGCCCTGACTGAGCTGTGACGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622953.1 |
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| CDS CAA 90 bp | TTTGCCTTCATTCAGTCCTGCGAAGCCTCGGAGGAAAGGCTGAGCTaGGTGCTGTCACCCTGTCTCCCTCCAGGTCACCTCCAGGTCACA | + |
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Preference number: 6 (lower is better) Translates to: FAFIQSCEASEERLS*VLSPCLPPGHLQVT Trigger: TGTGACCTGGAGGTGACCTGGAGGGAGACAGGGTGACAGCACCAAGCTCAGCCTTTCCTCCGAGGCTTCGCAGGACTGAATGAAGGCAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622953.1 |
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| CDS GCA 72 bp | GTGTGGCTGGGGCTCTTGGGCCTTCAGTTTTCTTCCTaGCGAGTGGGTTCAGGAAGAGCAGGCTCTGAGTCA | + |
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Preference number: 6 (lower is better) Translates to: VWLGLLGLQFSS*RVGSGRAGSES Trigger: TGACTCAGAGCCTGCTCTTCCTGAACCCACTCGGCAGGAAGAAAACTGAAGGCCCAAGAGCCCCAGCCACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622953.1 |
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| CDS TCA 72 bp | CCATGCTTCCGGCTCCGTTGCCCACAAGCTGAACAGTaGCTTGGTGTCAGGGTGGCAAAGAGAATAGGTGCC | + |
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Preference number: 6 (lower is better) Translates to: PCFRLRCPQAEQ*LGVRVAKRIGA Trigger: GGCACCTATTCTCTTTGCCACCCTGACACCAAGTCACTGTTCAGCTTGTGGGCAACGGAGCCGGAAGCATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622953.1 |
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| CDS CAA 72 bp | GCTTCCCCATCTGTGAGATCGGGCTCCATGCCCGTCTaGTTGGACTCATCAAGAGACCCATGGGGAGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: ASPSVRSGSMPV*LDSSRDPWGGK Trigger: CTTTCCTCCCCATGGGTCTCTTGATGAGTCCAACAAGACGGGCATGGAGCCCGATCTCACAGATGGGGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622953.1 |
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| CDS CAA 72 bp | ATGGGGGCCATTTCGCACACCAAGAGGCTGAGTCACTaGCCCAAGATTGGGCCTCTGGTGAGTGACAGGCAA | + |
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Preference number: 6 (lower is better) Translates to: MGAISHTKRLSH*PKIGPLVSDRQ Trigger: TTGCCTGTCACTCACCAGAGGCCCAATCTTGGGCAAGTGACTCAGCCTCTTGGTGTGCGAAATGGCCCCCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000622953.1 |
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| CDS CAA 72 bp | GCTCAGTCAGGGCCCCAGGAAGGACAATCCCATGGCTaGGGGTGTTGGGAAGTTTGCCTTCATTCAGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: AQSGPQEGQSHG*GCWEVCLHSVL Trigger: CAGGACTGAATGAAGGCAAACTTCCCAACACCCCAAGCCATGGGATTGTCCTTCCTGGGGCCCTGACTGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622953.1 |
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| CDS GCA 72 bp | CCACCAACCAGCAGGGGCACCTGGGGAAACCTCCAGTaGAGAAATCGTACTCTGCCATTTCCTGTATCTCCA | + |
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Preference number: 6 (lower is better) Translates to: PPTSRGTWGNLQ*RNRTLPFPVSP Trigger: TGGAGATACAGGAAATGGCAGAGTACGATTTCTGCACTGGAGGTTTCCCCAGGTGCCCCTGCTGGTTGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622953.1 |
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| CDS GCA 72 bp | GAAGGACAATCCCATGGCTTGGGGTGTTGGGAAGTTTaGCTTCATTCAGTCCTGCGAAGCCTCGGAGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: EGQSHGLGCWEV*LHSVLRSLGGK Trigger: CTTTCCTCCGAGGCTTCGCAGGACTGAATGAAGGCAAACTTCCCAACACCCCAAGCCATGGGATTGTCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622953.1 |
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| CDS CAA 72 bp | GAAGGAAGGGCTAGCCCCTGGAGAGCATCTTATCTCTaGTTTGATGGATGGCCCAGAGAGGGTGAGTGGCTT | + |
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Preference number: 6 (lower is better) Translates to: EGRASPWRASYL*FDGWPREGEWL Trigger: AAGCCACTCACCCTCTCTGGGCCATCCATCAAACAAGAGATAAGATGCTCTCCAGGGGCTAGCCCTTCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622953.1 |
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| CDS CAA 72 bp | GGAAGGACAATCCCATGGCTTGGGGTGTTGGGAAGTTaGCCTTCATTCAGTCCTGCGAAGCCTCGGAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: GRTIPWLGVLGS*PSFSPAKPRRK Trigger: TTTCCTCCGAGGCTTCGCAGGACTGAATGAAGGCAAACTTCCCAACACCCCAAGCCATGGGATTGTCCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622953.1 |
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| CDS CCA 72 bp | ATATTCTGGGAATCCATAAAACTGACAGCCAACTCGTaGGGATGGTCGTGGCTCCTGTGTTCCCCACCAACC | + |
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Preference number: 6 (lower is better) Translates to: IFWESIKLTANS*GWSWLLCSPPT Trigger: GGTTGGTGGGGAACACAGGAGCCACGACCATCCCCACGAGTTGGCTGTCAGTTTTATGGATTCCCAGAATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622953.1 |
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| CDS CCA 72 bp | AGGGGTTTAGGTAGTCCCTCCTCCATCCTGTCCTCATaGATGGATGCCTGTGCCCTCCCTAGATTTTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: RGLGSPSSILSS*MDACALPRFFS Trigger: TGAGAAAAATCTAGGGAGGGCACAGGCATCCATCCATGAGGACAGGATGGAGGAGGGACTACCTAAACCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000622953.1 |
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| CDS CAA 72 bp | ACCTTGTGGGTAGATGTGGGAGGGAACAGGCCGGCCTaGACCAGTGCCATCCACTCAGCTGTTAAATATTCT | + |
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Preference number: 6 (lower is better) Translates to: TLWVDVGGNRPA*TSAIHSAVKYS Trigger: AGAATATTTAACAGCTGAGTGGATGGCACTGGTCAAGGCCGGCCTGTTCCCTCCCACATCTACCCACAAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622953.1 |
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| CDS CAA 90 bp | CAGGAAGATACCTTGTGGGTAGATGTGGGAGGGAACAGGCCGGCCTaGACCAGTGCCATCCACTCAGCTGTTAAATATTCTGGGAATCCA | + |
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Preference number: 6 (lower is better) Translates to: QEDTLWVDVGGNRPA*TSAIHSAVKYSGNP Trigger: TGGATTCCCAGAATATTTAACAGCTGAGTGGATGGCACTGGTCAAGGCCGGCCTGTTCCCTCCCACATCTACCCACAAGGTATCTTCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000622953.1 |
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| CDS CCA 72 bp | AGATTTTTCTCACGGTCCGAAGGAAGGGCTAGCCCCTaGAGAGCATCTTATCTCTTGTTTGATGGATGGCCC | + |
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Preference number: 6 (lower is better) Translates to: RFFSRSEGRASP*RASYLLFDGWP Trigger: GGGCCATCCATCAAACAAGAGATAAGATGCTCTCCAGGGGCTAGCCCTTCCTTCGGACCGTGAGAAAAATCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000622953.1 |
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| CDS TCA 72 bp | CTCTGCCATTTCCTGTATCTCCAGCTATTCCCCATCTaGAGAGTGAGGTGGTTAGACCAGGTCCCTGGTTTT | + |
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Preference number: 6 (lower is better) Translates to: LCHFLYLQLFPI*RVRWLDQVPGF Trigger: AAAACCAGGGACCTGGTCTAACCACCTCACTCTTCAGATGGGGAATAGCTGGAGATACAGGAAATGGCAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000622953.1 |
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| CDS CAA 72 bp | TTAATCTTTCCCAAAACCCATGCAAAGGGCATCCTTTaGTCTCCATTTTCTATTATATGTGCTGAGATGAGC | + |
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Preference number: 6 (lower is better) Translates to: LIFPKTHAKGIL*SPFSIICAEMS Trigger: GCTCATCTCAGCACATATAATAGAAAATGGAGACAAAAGGATGCCCTTTGCATGGGTTTTGGGAAAGATTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000622953.1 |
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