Pregenerated sensors for LINC01097 (Homo sapiens)
Ensembl gene IDs: ENSG00000281202Ensembl transcript IDs: ENST00000627163.2, ENST00000627575.1, ENST00000628853.1
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AAGCAGGAAGGGGCGTCCTGCGCGGTGGGACCCGCGCGGGGGCAGTaGCGCAGGCGCCAGGAGGCAGGTGCAGCACCGAGCCCGGTGCGC | + |
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Preference number: 5 (lower is better) Translates to: KQEGASCAVGPARGQ*RRRQEAGAAPSPVR Trigger: GCGCACCGGGCTCGGTGCTGCACCTGCCTCCTGGCGCCTGCGCCACTGCCCCCGCGCGGGTCCCACCGCGCAGGACGCCCCTTCCTGCTT 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000627163.2 ENST00000627575.1 ENST00000628853.1 |
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| CDS GCA 90 bp | GGCAGTGGCGCAGGCGCCAGGAGGCAGGTGCAGCACCGAGCCCGGTaGGCCGCTGCAGGCGGGTGCACGGGTGGCGAGAATGGGGAGATG | + |
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Preference number: 5 (lower is better) Translates to: GSGAGARRQVQHRAR*AAAGGCTGGENGEM Trigger: CATCTCCCCATTCTCGCCACCCGTGCACCCGCCTGCAGCGGCGCACCGGGCTCGGTGCTGCACCTGCCTCCTGGCGCCTGCGCCACTGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000627163.2 ENST00000627575.1 ENST00000628853.1 |
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| CDS GCA 90 bp | CCGCGTGTGATCCACAGCAGACGTCGGAAGCAGGAAGGGGCGTCCTaGGCGGTGGGACCCGCGCGGGGGCAGTGGCGCAGGCGCCAGGAG | + |
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Preference number: 5 (lower is better) Translates to: PRVIHSRRRKQEGAS*AVGPARGQWRRRQE Trigger: CTCCTGGCGCCTGCGCCACTGCCCCCGCGCGGGTCCCACCGCGCAGGACGCCCCTTCCTGCTTCCGACGTCTGCTGTGGATCACACGCGG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000627163.2 ENST00000627575.1 ENST00000628853.1 |
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| CDS GCA 90 bp | CGCTGCTGCAGTGTTCCCCTTCCAACCGCTCAGCAGTGGCGCAAGTaGTTCCTCCACTTGCGTGGGTGGCGTCTCAGCGAAGGTCCGCGC | + |
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Preference number: 5 (lower is better) Translates to: RCCSVPLPTAQQWRK*FLHLRGWRLSEGPR Trigger: GCGCGGACCTTCGCTGAGACGCCACCCACGCAAGTGGAGGAAGCACTTGCGCCACTGCTGAGCGGTTGGAAGGGGAACACTGCAGCAGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628853.1 |
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| CDS GCA 90 bp | CATCGCTGCAGTGTTCCCCTTCCAACCGCTCAGCAGTGGCGCAAGTaGTTCCTCCACTTGCGTGGGTGGCGTCTCAGCGAAGGTCCGCGC | + |
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Preference number: 5 (lower is better) Translates to: HRCSVPLPTAQQWRK*FLHLRGWRLSEGPR Trigger: GCGCGGACCTTCGCTGAGACGCCACCCACGCAAGTGGAGGAAGCACTTGCGCCACTGCTGAGCGGTTGGAAGGGGAACACTGCAGCGATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000627163.2 ENST00000627575.1 |
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| CDS CCA 90 bp | CCAACCGCTCAGCAGTGGCGCAAGTGCTTCCTCCACTTGCGTGGGTaGCGTCTCAGCGAAGGTCCGCGCCCTTCGAGTGTTGCAGGACAG | + |
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Preference number: 5 (lower is better) Translates to: PTAQQWRKCFLHLRG*RLSEGPRPSSVAGQ Trigger: CTGTCCTGCAACACTCGAAGGGCGCGGACCTTCGCTGAGACGCCACCCACGCAAGTGGAGGAAGCACTTGCGCCACTGCTGAGCGGTTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628853.1 |
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| CDS CCA 90 bp | CCTTCCAACCGCTCAGCAGTGGCGCAAGTGCTTCCTCCACTTGCGTaGGTGGCGTCTCAGCGAAGGTCCGCGCCCTTCGAGTGTTGCAGG | + |
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Preference number: 5 (lower is better) Translates to: PSNRSAVAQVLPPLA*VASQRRSAPFECCR Trigger: CCTGCAACACTCGAAGGGCGCGGACCTTCGCTGAGACGCCACCCACGCAAGTGGAGGAAGCACTTGCGCCACTGCTGAGCGGTTGGAAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628853.1 |
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| CDS GCA 90 bp | TTCCCCTTCCAACCGCTCAGCAGTGGCGCAAGTGCTTCCTCCACTTaGGTGGGTGGCGTCTCAGCGAAGGTCCGCGCCCTTCGAGTGTCT | + |
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Preference number: 5 (lower is better) Translates to: FPFQPLSSGASASST*VGGVSAKVRALRVS Trigger: AGACACTCGAAGGGCGCGGACCTTCGCTGAGACGCCACCCACGCAAGTGGAGGAAGCACTTGCGCCACTGCTGAGCGGTTGGAAGGGGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000627163.2 ENST00000627575.1 |
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| CDS GCA 90 bp | TTCCCCTTCCAACCGCTCAGCAGTGGCGCAAGTGCTTCCTCCACTTaGGTGGGTGGCGTCTCAGCGAAGGTCCGCGCCCTTCGAGTGTTG | + |
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Preference number: 5 (lower is better) Translates to: FPFQPLSSGASASST*VGGVSAKVRALRVL Trigger: CAACACTCGAAGGGCGCGGACCTTCGCTGAGACGCCACCCACGCAAGTGGAGGAAGCACTTGCGCCACTGCTGAGCGGTTGGAAGGGGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628853.1 |
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| CDS CCA 90 bp | CCAACCGCTCAGCAGTGGCGCAAGTGCTTCCTCCACTTGCGTGGGTaGCGTCTCAGCGAAGGTCCGCGCCCTTCGAGTGTCTTTGCCTGT | + |
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Preference number: 5 (lower is better) Translates to: PTAQQWRKCFLHLRG*RLSEGPRPSSVFAC Trigger: ACAGGCAAAGACACTCGAAGGGCGCGGACCTTCGCTGAGACGCCACCCACGCAAGTGGAGGAAGCACTTGCGCCACTGCTGAGCGGTTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627163.2 |
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| CDS CCA 90 bp | CCTTCCAACCGCTCAGCAGTGGCGCAAGTGCTTCCTCCACTTGCGTaGGTGGCGTCTCAGCGAAGGTCCGCGCCCTTCGAGTGTCTTTGC | + |
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Preference number: 5 (lower is better) Translates to: PSNRSAVAQVLPPLA*VASQRRSAPFECLC Trigger: GCAAAGACACTCGAAGGGCGCGGACCTTCGCTGAGACGCCACCCACGCAAGTGGAGGAAGCACTTGCGCCACTGCTGAGCGGTTGGAAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627163.2 |
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| CDS CCA 90 bp | CCAACCGCTCAGCAGTGGCGCAAGTGCTTCCTCCACTTGCGTGGGTaGCGTCTCAGCGAAGGTCCGCGCCCTTCGAGTGTCTGGAAAGGA | + |
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Preference number: 5 (lower is better) Translates to: PTAQQWRKCFLHLRG*RLSEGPRPSSVWKG Trigger: TCCTTTCCAGACACTCGAAGGGCGCGGACCTTCGCTGAGACGCCACCCACGCAAGTGGAGGAAGCACTTGCGCCACTGCTGAGCGGTTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627575.1 |
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| CDS CCA 90 bp | CCTTCCAACCGCTCAGCAGTGGCGCAAGTGCTTCCTCCACTTGCGTaGGTGGCGTCTCAGCGAAGGTCCGCGCCCTTCGAGTGTCTGGAA | + |
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Preference number: 5 (lower is better) Translates to: PSNRSAVAQVLPPLA*VASQRRSAPFECLE Trigger: TTCCAGACACTCGAAGGGCGCGGACCTTCGCTGAGACGCCACCCACGCAAGTGGAGGAAGCACTTGCGCCACTGCTGAGCGGTTGGAAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627575.1 |
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| CDS CCA 90 bp | CTCGTGGGTCATCGCTGCAGTGTTCCCCTTCCAACCGCTCAGCAGTaGCGCAAGTGCTTCCTCCACTTGCGTGGGTGGCGTCTCAGCGAA | + |
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Preference number: 5 (lower is better) Translates to: LVGHRCSVPLPTAQQ*RKCFLHLRGWRLSE Trigger: TTCGCTGAGACGCCACCCACGCAAGTGGAGGAAGCACTTGCGCCACTGCTGAGCGGTTGGAAGGGGAACACTGCAGCGATGACCCACGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000627163.2 ENST00000627575.1 |
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| CDS CCA 90 bp | GTGGGTCATCGCTGCTGCAGTGTTCCCCTTCCAACCGCTCAGCAGTaGCGCAAGTGCTTCCTCCACTTGCGTGGGTGGCGTCTCAGCGAA | + |
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Preference number: 5 (lower is better) Translates to: VGHRCCSVPLPTAQQ*RKCFLHLRGWRLSE Trigger: TTCGCTGAGACGCCACCCACGCAAGTGGAGGAAGCACTTGCGCCACTGCTGAGCGGTTGGAAGGGGAACACTGCAGCAGCGATGACCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628853.1 |
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| CDS CCA 90 bp | CTGGGCGTCCCCAAAGTCACTGGGTCAGAACCGAAATGGAGGCTTTaGCAGCGACCGCGTGTGATCCACAGCAGACGTCGGAAGCAGGAA | + |
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Preference number: 5 (lower is better) Translates to: LGVPKVTGSEPKWRL*QRPRVIHSRRRKQE Trigger: TTCCTGCTTCCGACGTCTGCTGTGGATCACACGCGGTCGCTGCCAAAGCCTCCATTTCGGTTCTGACCCAGTGACTTTGGGGACGCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000627163.2 ENST00000627575.1 ENST00000628853.1 |
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| CDS CCA 90 bp | TTGCGTGGGTGGCGTCTCAGCGAAGGTCCGCGCCCTTCGAGTGTCTaGAAAGGAGCCGTGTTGAGCTTGCAACCATTTTTGGAGTGGGGC | + |
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Preference number: 5 (lower is better) Translates to: LRGWRLSEGPRPSSV*KGAVLSLQPFLEWG Trigger: GCCCCACTCCAAAAATGGTTGCAAGCTCAACACGGCTCCTTTCCAGACACTCGAAGGGCGCGGACCTTCGCTGAGACGCCACCCACGCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000627575.1 |
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| CDS TCA 90 bp | AGCTCTCAGGCCCTTTCGGCAACTTCTCGGCTTCCCTTGCATCTCTaGACGTTAGTGATCCGGACCTCAGATCCGGTTTCCGAGGGCGCC | + |
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Preference number: 5 (lower is better) Translates to: SSQALSATSRLPLHL*TLVIRTSDPVSEGA Trigger: GGCGCCCTCGGAAACCGGATCTGAGGTCCGGATCACTAACGTTCAGAGATGCAAGGGAAGCCGAGAAGTTGCCGAAAGGGCCTGAGAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000627163.2 ENST00000628853.1 |
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| CDS CCA 90 bp | CACTGGCTGGTTCACCTTGGCCACATCCTCTCCACATCTCCTCCCTaGGCGTCCCCAAAGTCACTGGGTCAGAACCGAAATGGAGGCTTT | + |
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Preference number: 5 (lower is better) Translates to: HWLVHLGHILSTSPP*ASPKSLGQNRNGGF Trigger: AAAGCCTCCATTTCGGTTCTGACCCAGTGACTTTGGGGACGCCCAGGGAGGAGATGTGGAGAGGATGTGGCCAAGGTGAACCAGCCAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000627163.2 ENST00000627575.1 ENST00000628853.1 |
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| CDS CCA 90 bp | GGTAGGTGTTACCGAGAAGCCAGAAGCATTAGCACTTACACTGGCTaGTTCACCTTGGCCACATCCTCTCCACATCTCCTCCCTGGGCGT | + |
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Preference number: 5 (lower is better) Translates to: GRCYREARSISTYTG*FTLATSSPHLLPGR Trigger: ACGCCCAGGGAGGAGATGTGGAGAGGATGTGGCCAAGGTGAACCAGCCAGTGTAAGTGCTAATGCTTCTGGCTTCTCGGTAACACCTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000627163.2 ENST00000627575.1 ENST00000628853.1 |
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| CDS TCA 90 bp | GATTTCTTCTCCATCTCTGTTTCCCTAATGGGCACCTGGTCTCGTTaGCACTCGTGGGTCATCGCTGCTGCAGTGTTCCCCTTCCAACCG | + |
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Preference number: 5 (lower is better) Translates to: DFFSISVSLMGTWSR*HSWVIAAAVFPFQP Trigger: CGGTTGGAAGGGGAACACTGCAGCAGCGATGACCCACGAGTGTCAACGAGACCAGGTGCCCATTAGGGAAACAGAGATGGAGAAGAAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628853.1 |
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| CDS TCA 90 bp | TCAGCGAAGGTCCGCGCCCTTCGAGTGTCTGGAAAGGAGCCGTGTTaGGCTTGCAACCATTTTTGGAGTGGGGCATCTTTAACCCTGTCT | + |
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Preference number: 5 (lower is better) Translates to: SAKVRALRVSGKEPC*ACNHFWSGASLTLS Trigger: AGACAGGGTTAAAGATGCCCCACTCCAAAAATGGTTGCAAGCTCAACACGGCTCCTTTCCAGACACTCGAAGGGCGCGGACCTTCGCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000627575.1 |
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| CDS TCA 90 bp | AGGCTTGCAAATAAAAGGAGGGAGCCAGGTCTGCCTTTCCCGGGCTaGAGGACAAAAACAGTCTCACCACTGGGAATGGTTCTGTGCAGA | + |
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Preference number: 5 (lower is better) Translates to: RLANKRREPGLPFPG*RTKTVSPLGMVLCR Trigger: TCTGCACAGAACCATTCCCAGTGGTGAGACTGTTTTTGTCCTTCAGCCCGGGAAAGGCAGACCTGGCTCCCTCCTTTTATTTGCAAGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000627163.2 ENST00000627575.1 |
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| CDS CCA 90 bp | GCAGCTAAGGCAACTCTTGGAGGTTTGAGGCTTGAGACGTGTGCCTaGAACCTGAATAGCAGTTCCACAGCTTTAGGGCGCGTTCTTACA | + |
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Preference number: 5 (lower is better) Translates to: AAKATLGGLRLETCA*NLNSSSTALGRVLT Trigger: TGTAAGAACGCGCCCTAAAGCTGTGGAACTGCTATTCAGGTTCCAGGCACACGTCTCAAGCCTCAAACCTCCAAGAGTTGCCTTAGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000627163.2 ENST00000627575.1 |
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| CDS TCA 90 bp | GAGCCACTATCTTCAGGCTTGACCTCCGTCTTCTTACCAGTAAAATaGGCAGCTAAGGCAACTCTTGGAGGTTTGAGGCTTGAGACGTGT | + |
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Preference number: 5 (lower is better) Translates to: EPLSSGLTSVFLPVK*AAKATLGGLRLETC Trigger: ACACGTCTCAAGCCTCAAACCTCCAAGAGTTGCCTTAGCTGCTCATTTTACTGGTAAGAAGACGGAGGTCAAGCCTGAAGATAGTGGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000627163.2 ENST00000627575.1 |
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| CDS GCA 90 bp | GCAGAATTTTCTCACCAATTACTAGCCTTGAGATCTTGGATAAGCTaGACTCTCCTCTGCCCTCAGTCTCCATTGCAGGACAGGAAAGCG | + |
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Preference number: 5 (lower is better) Translates to: AEFSHQLLALRSWIS*TLLCPQSPLQDRKA Trigger: CGCTTTCCTGTCCTGCAATGGAGACTGAGGGCAGAGGAGAGTGCAGCTTATCCAAGATCTCAAGGCTAGTAATTGGTGAGAAAATTCTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627163.2 |
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| CDS GCA 90 bp | CACCAATTACTAGCCTTGAGATCTTGGATAAGCTGCACTCTCCTCTaGCCTCAGTCTCCATCTGAAGGCATATGGAGAACTTGGCCAAGT | + |
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Preference number: 5 (lower is better) Translates to: HQLLALRSWISCTLL*PQSPSEGIWRTWPS Trigger: ACTTGGCCAAGTTCTCCATATGCCTTCAGATGGAGACTGAGGGCAGAGGAGAGTGCAGCTTATCCAAGATCTCAAGGCTAGTAATTGGTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627575.1 |
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| CDS GCA 90 bp | AAACTTAGCATCCAGACCTCTGACTGGAGAGGCCTCCCTCCAAACTaGCTTTCTAGGCAACATTTAGAACATCTCTCTGCAAGGATCCTT | + |
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Preference number: 5 (lower is better) Translates to: KLSIQTSDWRGLPPN*LSRQHLEHLSARIL Trigger: AAGGATCCTTGCAGAGAGATGTTCTAAATGTTGCCTAGAAAGGCAGTTTGGAGGGAGGCCTCTCCAGTCAGAGGTCTGGATGCTAAGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000627163.2 ENST00000627575.1 |
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| CDS CCA 90 bp | TGGTTCTGTGCAGAATTTTCTCACCAATTACTAGCCTTGAGATCTTaGATAAGCTGCACTCTCCTCTGCCCTCAGTCTCCATTGCAGGAC | + |
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Preference number: 5 (lower is better) Translates to: WFCAEFSHQLLALRS*ISCTLLCPQSPLQD Trigger: GTCCTGCAATGGAGACTGAGGGCAGAGGAGAGTGCAGCTTATCCAAGATCTCAAGGCTAGTAATTGGTGAGAAAATTCTGCACAGAACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627163.2 |
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| CDS CCA 90 bp | TGGCTAATATGTGGCAGAGCTAAACTTAGCATCCAGACCTCTGACTaGAGAGGCCTCCCTCCAAACTGCCTTTCTAGGCAACATTTAGAA | + |
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Preference number: 5 (lower is better) Translates to: WLICGRAKLSIQTSD*RGLPPNCLSRQHLE Trigger: TTCTAAATGTTGCCTAGAAAGGCAGTTTGGAGGGAGGCCTCTCCAGTCAGAGGTCTGGATGCTAAGTTTAGCTCTGCCACATATTAGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000627163.2 ENST00000627575.1 |
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| CDS CCA 90 bp | TGGTTCTGTGCAGAATTTTCTCACCAATTACTAGCCTTGAGATCTTaGATAAGCTGCACTCTCCTCTGCCCTCAGTCTCCATCTGAAGGC | + |
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Preference number: 5 (lower is better) Translates to: WFCAEFSHQLLALRS*ISCTLLCPQSPSEG Trigger: GCCTTCAGATGGAGACTGAGGGCAGAGGAGAGTGCAGCTTATCCAAGATCTCAAGGCTAGTAATTGGTGAGAAAATTCTGCACAGAACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627575.1 |
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| CDS GCA 90 bp | ACATTCACAAACATCCTTGCAAAATCGCAAAGAAGTGTCCACTGCTaGTTTAGAGCTGGCCAAAAGGATGAGCCAAACAGGCTTCTACTC | + |
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Preference number: 5 (lower is better) Translates to: TFTNILAKSQRSVHC*FRAGQKDEPNRLLL Trigger: GAGTAGAAGCCTGTTTGGCTCATCCTTTTGGCCAGCTCTAAAGCAGCAGTGGACACTTCTTTGCGATTTTGCAAGGATGTTTGTGAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000627163.2 ENST00000627575.1 |
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| CDS TCA 90 bp | GTTGACTCTCAGGTTGTCTGGCTGCAAATGATCCTGTGCTGGATGTaGAAATGGAGGTTCCATTTGTTCAGAGGCCTCTGCATTAATATT | + |
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Preference number: 5 (lower is better) Translates to: VDSQVVWLQMILCWM*KWRFHLFRGLCINI Trigger: AATATTAATGCAGAGGCCTCTGAACAAATGGAACCTCCATTTTCACATCCAGCACAGGATCATTTGCAGCCAGACAACCTGAGAGTCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000627163.2 ENST00000627575.1 |
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| CDS GCA 90 bp | AGTACATTCACAAACATCCTTGCAAAATCGCAAAGAAGTGTCCACTaGTGCTTTAGAGCTGGCCAAAAGGATGAGCCAAACAGGCTTCTA | + |
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Preference number: 5 (lower is better) Translates to: STFTNILAKSQRSVH*CFRAGQKDEPNRLL Trigger: TAGAAGCCTGTTTGGCTCATCCTTTTGGCCAGCTCTAAAGCAGCAGTGGACACTTCTTTGCGATTTTGCAAGGATGTTTGTGAATGTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000627163.2 ENST00000627575.1 |
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| CDS CCA 90 bp | AAGAAATGGAGGCACAAAGAGATTGTTTATTACTTCAAAATTACCTaGCTAATATGTGGCAGAGCTAAACTTAGCATCCAGACCTCTGAC | + |
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Preference number: 5 (lower is better) Translates to: KKWRHKEIVYYFKIT*LICGRAKLSIQTSD Trigger: GTCAGAGGTCTGGATGCTAAGTTTAGCTCTGCCACATATTAGCCAGGTAATTTTGAAGTAATAAACAATCTCTTTGTGCCTCCATTTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000627163.2 ENST00000627575.1 |
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| CDS GCA 72 bp | GCAGGCGCCAGGAGGCAGGTGCAGCACCGAGCCCGGTaGGCCGCTGCAGGCGGGTGCACGGGTGGCGAGAAT | + |
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Preference number: 6 (lower is better) Translates to: AGARRQVQHRAR*AAAGGCTGGEN Trigger: ATTCTCGCCACCCGTGCACCCGCCTGCAGCGGCGCACCGGGCTCGGTGCTGCACCTGCCTCCTGGCGCCTGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000627163.2 ENST00000627575.1 ENST00000628853.1 |
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| CDS GCA 72 bp | CAGGAGGCAGGTGCAGCACCGAGCCCGGTGCGCCGCTaGAGGCGGGTGCACGGGTGGCGAGAATGGGGAGAT | + |
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Preference number: 6 (lower is better) Translates to: QEAGAAPSPVRR*RRVHGWREWGD Trigger: ATCTCCCCATTCTCGCCACCCGTGCACCCGCCTGCAGCGGCGCACCGGGCTCGGTGCTGCACCTGCCTCCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000627163.2 ENST00000627575.1 ENST00000628853.1 |
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| CDS CCA 72 bp | CGCTCAGCAGTGGCGCAAGTGCTTCCTCCACTTGCGTaGGTGGCGTCTCAGCGAAGGTCCGCGCCCTTCGAG | + |
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Preference number: 6 (lower is better) Translates to: RSAVAQVLPPLA*VASQRRSAPFE Trigger: CTCGAAGGGCGCGGACCTTCGCTGAGACGCCACCCACGCAAGTGGAGGAAGCACTTGCGCCACTGCTGAGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000627163.2 ENST00000627575.1 ENST00000628853.1 |
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| CDS CAA 72 bp | CCAACCGCTCAGCAGTGGCGCAAGTGCTTCCTCCACTaGCGTGGGTGGCGTCTCAGCGAAGGTCCGCGCCCT | + |
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Preference number: 6 (lower is better) Translates to: PTAQQWRKCFLH*RGWRLSEGPRP Trigger: AGGGCGCGGACCTTCGCTGAGACGCCACCCACGCAAGTGGAGGAAGCACTTGCGCCACTGCTGAGCGGTTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000627163.2 ENST00000627575.1 ENST00000628853.1 |
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| CDS GCA 72 bp | CAACCGCTCAGCAGTGGCGCAAGTGCTTCCTCCACTTaGGTGGGTGGCGTCTCAGCGAAGGTCCGCGCCCTT | + |
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Preference number: 6 (lower is better) Translates to: QPLSSGASASST*VGGVSAKVRAL Trigger: AAGGGCGCGGACCTTCGCTGAGACGCCACCCACGCAAGTGGAGGAAGCACTTGCGCCACTGCTGAGCGGTTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000627163.2 ENST00000627575.1 ENST00000628853.1 |
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| CDS CCA 72 bp | CAGCAGTGGCGCAAGTGCTTCCTCCACTTGCGTGGGTaGCGTCTCAGCGAAGGTCCGCGCCCTTCGAGTGTC | + |
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Preference number: 6 (lower is better) Translates to: QQWRKCFLHLRG*RLSEGPRPSSV Trigger: GACACTCGAAGGGCGCGGACCTTCGCTGAGACGCCACCCACGCAAGTGGAGGAAGCACTTGCGCCACTGCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000627163.2 ENST00000627575.1 |
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| CDS CAA 90 bp | GTTCCCCTTCCAACCGCTCAGCAGTGGCGCAAGTGCTTCCTCCACTaGCGTGGGTGGCGTCTCAGCGAAGGTCCGCGCCCTTCGAGTGTC | + |
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Preference number: 6 (lower is better) Translates to: VPLPTAQQWRKCFLH*RGWRLSEGPRPSSV Trigger: GACACTCGAAGGGCGCGGACCTTCGCTGAGACGCCACCCACGCAAGTGGAGGAAGCACTTGCGCCACTGCTGAGCGGTTGGAAGGGGAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000627163.2 ENST00000627575.1 |
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| CDS CCA 72 bp | CAGCAGTGGCGCAAGTGCTTCCTCCACTTGCGTGGGTaGCGTCTCAGCGAAGGTCCGCGCCCTTCGAGTGTT | + |
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Preference number: 6 (lower is better) Translates to: QQWRKCFLHLRG*RLSEGPRPSSV Trigger: AACACTCGAAGGGCGCGGACCTTCGCTGAGACGCCACCCACGCAAGTGGAGGAAGCACTTGCGCCACTGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628853.1 |
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| CDS CCA 72 bp | CGCTGCTGCAGTGTTCCCCTTCCAACCGCTCAGCAGTaGCGCAAGTGCTTCCTCCACTTGCGTGGGTGGCGT | + |
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Preference number: 6 (lower is better) Translates to: RCCSVPLPTAQQ*RKCFLHLRGWR Trigger: ACGCCACCCACGCAAGTGGAGGAAGCACTTGCGCCACTGCTGAGCGGTTGGAAGGGGAACACTGCAGCAGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628853.1 |
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| CDS CAA 90 bp | GTTCCCCTTCCAACCGCTCAGCAGTGGCGCAAGTGCTTCCTCCACTaGCGTGGGTGGCGTCTCAGCGAAGGTCCGCGCCCTTCGAGTGTT | + |
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Preference number: 6 (lower is better) Translates to: VPLPTAQQWRKCFLH*RGWRLSEGPRPSSV Trigger: AACACTCGAAGGGCGCGGACCTTCGCTGAGACGCCACCCACGCAAGTGGAGGAAGCACTTGCGCCACTGCTGAGCGGTTGGAAGGGGAAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000628853.1 |
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| CDS CCA 72 bp | CATCGCTGCAGTGTTCCCCTTCCAACCGCTCAGCAGTaGCGCAAGTGCTTCCTCCACTTGCGTGGGTGGCGT | + |
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Preference number: 6 (lower is better) Translates to: HRCSVPLPTAQQ*RKCFLHLRGWR Trigger: ACGCCACCCACGCAAGTGGAGGAAGCACTTGCGCCACTGCTGAGCGGTTGGAAGGGGAACACTGCAGCGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000627163.2 ENST00000627575.1 |
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| CDS CAA 90 bp | CCTGGGCGTCCCCAAAGTCACTGGGTCAGAACCGAAATGGAGGCTTaGGCAGCGACCGCGTGTGATCCACAGCAGACGTCGGAAGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: PGRPQSHWVRTEMEA*AATACDPQQTSEAG Trigger: TCCTGCTTCCGACGTCTGCTGTGGATCACACGCGGTCGCTGCCAAAGCCTCCATTTCGGTTCTGACCCAGTGACTTTGGGGACGCCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000627163.2 ENST00000627575.1 ENST00000628853.1 |
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| CDS TCA 72 bp | CAGAACCGAAATGGAGGCTTTGGCAGCGACCGCGTGTaGTCCACAGCAGACGTCGGAAGCAGGAAGGGGCGT | + |
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Preference number: 6 (lower is better) Translates to: QNRNGGFGSDRV*STADVGSRKGR Trigger: ACGCCCCTTCCTGCTTCCGACGTCTGCTGTGGATCACACGCGGTCGCTGCCAAAGCCTCCATTTCGGTTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000627163.2 ENST00000627575.1 ENST00000628853.1 |
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| CDS GCA 72 bp | AGTGTTCCCCTTCCAACCGCTCAGCAGTGGCGCAAGTaGTTCCTCCACTTGCGTGGGTGGCGTCTCAGCGAA | + |
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Preference number: 6 (lower is better) Translates to: SVPLPTAQQWRK*FLHLRGWRLSE Trigger: TTCGCTGAGACGCCACCCACGCAAGTGGAGGAAGCACTTGCGCCACTGCTGAGCGGTTGGAAGGGGAACACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000627163.2 ENST00000627575.1 ENST00000628853.1 |
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| CDS CCA 72 bp | CCCAAAGTCACTGGGTCAGAACCGAAATGGAGGCTTTaGCAGCGACCGCGTGTGATCCACAGCAGACGTCGG | + |
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Preference number: 6 (lower is better) Translates to: PKVTGSEPKWRL*QRPRVIHSRRR Trigger: CCGACGTCTGCTGTGGATCACACGCGGTCGCTGCCAAAGCCTCCATTTCGGTTCTGACCCAGTGACTTTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000627163.2 ENST00000627575.1 ENST00000628853.1 |
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| CDS CAA 72 bp | CCCCAAAGTCACTGGGTCAGAACCGAAATGGAGGCTTaGGCAGCGACCGCGTGTGATCCACAGCAGACGTCG | + |
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Preference number: 6 (lower is better) Translates to: PQSHWVRTEMEA*AATACDPQQTS Trigger: CGACGTCTGCTGTGGATCACACGCGGTCGCTGCCAAAGCCTCCATTTCGGTTCTGACCCAGTGACTTTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000627163.2 ENST00000627575.1 ENST00000628853.1 |
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| CDS TCA 72 bp | TCCATCTCTGTTTCCCTAATGGGCACCTGGTCTCGTTaGCACTCGTGGGTCATCGCTGCTGCAGTGTTCCCC | + |
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Preference number: 6 (lower is better) Translates to: SISVSLMGTWSR*HSWVIAAAVFP Trigger: GGGGAACACTGCAGCAGCGATGACCCACGAGTGTCAACGAGACCAGGTGCCCATTAGGGAAACAGAGATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628853.1 |
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| CDS CCA 72 bp | TGGCGTCTCAGCGAAGGTCCGCGCCCTTCGAGTGTCTaGAAAGGAGCCGTGTTGAGCTTGCAACCATTTTTG | + |
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Preference number: 6 (lower is better) Translates to: WRLSEGPRPSSV*KGAVLSLQPFL Trigger: CAAAAATGGTTGCAAGCTCAACACGGCTCCTTTCCAGACACTCGAAGGGCGCGGACCTTCGCTGAGACGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000627575.1 |
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| CDS CAA 72 bp | GCCAGAAGCATTAGCACTTACACTGGCTGGTTCACCTaGGCCACATCCTCTCCACATCTCCTCCCTGGGCGT | + |
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Preference number: 6 (lower is better) Translates to: ARSISTYTGWFT*ATSSPHLLPGR Trigger: ACGCCCAGGGAGGAGATGTGGAGAGGATGTGGCCAAGGTGAACCAGCCAGTGTAAGTGCTAATGCTTCTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000627163.2 ENST00000627575.1 ENST00000628853.1 |
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| CDS CAA 72 bp | CTCCATCTCTGTTTCCCTAATGGGCACCTGGTCTCGTaGACACTCGTGGGTCATCGCTGCTGCAGTGTTCCC | + |
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Preference number: 6 (lower is better) Translates to: LHLCFPNGHLVS*TLVGHRCCSVP Trigger: GGGAACACTGCAGCAGCGATGACCCACGAGTGTCAACGAGACCAGGTGCCCATTAGGGAAACAGAGATGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628853.1 |
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| CDS CAA 90 bp | CTCAGCGAAGGTCCGCGCCCTTCGAGTGTCTGGAAAGGAGCCGTGTaGAGCTTGCAACCATTTTTGGAGTGGGGCATCTTTAACCCTGTC | + |
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Preference number: 6 (lower is better) Translates to: LSEGPRPSSVWKGAV*SLQPFLEWGIFNPV Trigger: GACAGGGTTAAAGATGCCCCACTCCAAAAATGGTTGCAAGCTCAACACGGCTCCTTTCCAGACACTCGAAGGGCGCGGACCTTCGCTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000627575.1 |
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| CDS TCA 72 bp | GCCCTTTCGGCAACTTCTCGGCTTCCCTTGCATCTCTaGACGTTAGTGATCCGGACCTCAGATCCGGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: ALSATSRLPLHL*TLVIRTSDPVS Trigger: GGAAACCGGATCTGAGGTCCGGATCACTAACGTTCAGAGATGCAAGGGAAGCCGAGAAGTTGCCGAAAGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000627163.2 ENST00000628853.1 |
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| CDS TCA 72 bp | TCCATCTCTGTTTCCCTAATGGGCACCTGGTCTCGTTaGCACTCGTGGGTCATCGCTGCAGTGTTCCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: SISVSLMGTWSR*HSWVIAAVFPF Trigger: GAAGGGGAACACTGCAGCGATGACCCACGAGTGTCAACGAGACCAGGTGCCCATTAGGGAAACAGAGATGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000627163.2 ENST00000627575.1 |
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| CDS CAA 72 bp | CTCCATCTCTGTTTCCCTAATGGGCACCTGGTCTCGTaGACACTCGTGGGTCATCGCTGCAGTGTTCCCCTT | + |
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Preference number: 6 (lower is better) Translates to: LHLCFPNGHLVS*TLVGHRCSVPL Trigger: AAGGGGAACACTGCAGCGATGACCCACGAGTGTCAACGAGACCAGGTGCCCATTAGGGAAACAGAGATGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000627163.2 ENST00000627575.1 |
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| CDS TCA 72 bp | GTCCGCGCCCTTCGAGTGTCTGGAAAGGAGCCGTGTTaGGCTTGCAACCATTTTTGGAGTGGGGCATCTTTA | + |
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Preference number: 6 (lower is better) Translates to: VRALRVSGKEPC*ACNHFWSGASL Trigger: TAAAGATGCCCCACTCCAAAAATGGTTGCAAGCTCAACACGGCTCCTTTCCAGACACTCGAAGGGCGCGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000627575.1 |
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| CDS CCA 72 bp | GCAACTCTTGGAGGTTTGAGGCTTGAGACGTGTGCCTaGAACCTGAATAGCAGTTCCACAGCTTTAGGGCGC | + |
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Preference number: 6 (lower is better) Translates to: ATLGGLRLETCA*NLNSSSTALGR Trigger: GCGCCCTAAAGCTGTGGAACTGCTATTCAGGTTCCAGGCACACGTCTCAAGCCTCAAACCTCCAAGAGTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000627163.2 ENST00000627575.1 |
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| CDS CAA 90 bp | GAGAATGGGGAGATGTCGAGTGAGAGCCACGCCGAATTTCAGACCTaGGCGCGTGATTTCTTCTCCATCTCTGTTTCCCTAATGGGCACC | + |
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Preference number: 6 (lower is better) Translates to: ENGEMSSESHAEFQT*ARDFFSISVSLMGT Trigger: GGTGCCCATTAGGGAAACAGAGATGGAGAAGAAATCACGCGCCAAGGTCTGAAATTCGGCGTGGCTCTCACTCGACATCTCCCCATTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000627163.2 ENST00000627575.1 ENST00000628853.1 |
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| CDS CAA 90 bp | GAAGGTCCGCGCCCTTCGAGTGTCTGGAAAGGAGCCGTGTTGAGCTaGCAACCATTTTTGGAGTGGGGCATCTTTAACCCTGTCTTGATG | + |
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Preference number: 6 (lower is better) Translates to: EGPRPSSVWKGAVLS*QPFLEWGIFNPVLM Trigger: CATCAAGACAGGGTTAAAGATGCCCCACTCCAAAAATGGTTGCAAGCTCAACACGGCTCCTTTCCAGACACTCGAAGGGCGCGGACCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000627575.1 |
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| CDS CCA 72 bp | TACCGAGAAGCCAGAAGCATTAGCACTTACACTGGCTaGTTCACCTTGGCCACATCCTCTCCACATCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: YREARSISTYTG*FTLATSSPHLL Trigger: GAGGAGATGTGGAGAGGATGTGGCCAAGGTGAACCAGCCAGTGTAAGTGCTAATGCTTCTGGCTTCTCGGTA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000627163.2 ENST00000627575.1 ENST00000628853.1 |
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| CDS CCA 72 bp | TGTGGCAGAGCTAAACTTAGCATCCAGACCTCTGACTaGAGAGGCCTCCCTCCAAACTGCCTTTCTAGGCAA | + |
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Preference number: 6 (lower is better) Translates to: CGRAKLSIQTSD*RGLPPNCLSRQ Trigger: TTGCCTAGAAAGGCAGTTTGGAGGGAGGCCTCTCCAGTCAGAGGTCTGGATGCTAAGTTTAGCTCTGCCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000627163.2 ENST00000627575.1 |
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| CDS CAA 72 bp | CGCGCCCTTCGAGTGTCTTTGCCTGTCTTGATGGTTTaGAGGCTTGCAAATAAAAGGAGGGAGCCAGGTCTG | + |
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Preference number: 6 (lower is better) Translates to: RALRVSLPVLMV*RLANKRREPGL Trigger: CAGACCTGGCTCCCTCCTTTTATTTGCAAGCCTCAAAACCATCAAGACAGGCAAAGACACTCGAAGGGCGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627163.2 |
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| CDS CAA 72 bp | CGCCCTTCGAGTGTCTGGAAAGGAGCCGTGTTGAGCTaGCAACCATTTTTGGAGTGGGGCATCTTTAACCCT | + |
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Preference number: 6 (lower is better) Translates to: RPSSVWKGAVLS*QPFLEWGIFNP Trigger: AGGGTTAAAGATGCCCCACTCCAAAAATGGTTGCAAGCTCAACACGGCTCCTTTCCAGACACTCGAAGGGCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000627575.1 |
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| CDS TCA 72 bp | AATAAAAGGAGGGAGCCAGGTCTGCCTTTCCCGGGCTaGAGGACAAAAACAGTCTCACCACTGGGAATGGTT | + |
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Preference number: 6 (lower is better) Translates to: NKRREPGLPFPG*RTKTVSPLGMV Trigger: AACCATTCCCAGTGGTGAGACTGTTTTTGTCCTTCAGCCCGGGAAAGGCAGACCTGGCTCCCTCCTTTTATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000627163.2 ENST00000627575.1 |
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| CDS GCA 72 bp | CTAGCCTTGAGATCTTGGATAAGCTGCACTCTCCTCTaGCCTCAGTCTCCATTGCAGGACAGGAAAGCGATT | + |
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Preference number: 6 (lower is better) Translates to: LALRSWISCTLL*PQSPLQDRKAI Trigger: AATCGCTTTCCTGTCCTGCAATGGAGACTGAGGGCAGAGGAGAGTGCAGCTTATCCAAGATCTCAAGGCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627163.2 |
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| CDS CAA 72 bp | GAGATGTCGAGTGAGAGCCACGCCGAATTTCAGACCTaGGCGCGTGATTTCTTCTCCATCTCTGTTTCCCTA | + |
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Preference number: 6 (lower is better) Translates to: EMSSESHAEFQT*ARDFFSISVSL Trigger: TAGGGAAACAGAGATGGAGAAGAAATCACGCGCCAAGGTCTGAAATTCGGCGTGGCTCTCACTCGACATCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000627163.2 ENST00000627575.1 ENST00000628853.1 |
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| CDS GCA 72 bp | TCTCACCAATTACTAGCCTTGAGATCTTGGATAAGCTaGACTCTCCTCTGCCCTCAGTCTCCATTGCAGGAC | + |
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Preference number: 6 (lower is better) Translates to: SHQLLALRSWIS*TLLCPQSPLQD Trigger: GTCCTGCAATGGAGACTGAGGGCAGAGGAGAGTGCAGCTTATCCAAGATCTCAAGGCTAGTAATTGGTGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627163.2 |
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| CDS GCA 72 bp | CTAGCCTTGAGATCTTGGATAAGCTGCACTCTCCTCTaGCCTCAGTCTCCATCTGAAGGCATATGGAGAACT | + |
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Preference number: 6 (lower is better) Translates to: LALRSWISCTLL*PQSPSEGIWRT Trigger: AGTTCTCCATATGCCTTCAGATGGAGACTGAGGGCAGAGGAGAGTGCAGCTTATCCAAGATCTCAAGGCTAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000627575.1 |
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| CDS CAA 72 bp | TTGGAGTGGGGCATCTTTAACCCTGTCTTGATGGTTTaGAGGCTTGCAAATAAAAGGAGGGAGCCAGGTCTG | + |
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Preference number: 6 (lower is better) Translates to: LEWGIFNPVLMV*RLANKRREPGL Trigger: CAGACCTGGCTCCCTCCTTTTATTTGCAAGCCTCAAAACCATCAAGACAGGGTTAAAGATGCCCCACTCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000627575.1 |
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| CDS CAA 72 bp | GTCTGGAAAGGAGCCGTGTTGAGCTTGCAACCATTTTaGGAGTGGGGCATCTTTAACCCTGTCTTGATGGTT | + |
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Preference number: 6 (lower is better) Translates to: VWKGAVLSLQPF*EWGIFNPVLMV Trigger: AACCATCAAGACAGGGTTAAAGATGCCCCACTCCAAAAATGGTTGCAAGCTCAACACGGCTCCTTTCCAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000627575.1 |
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| CDS CAA 90 bp | CACTGGGAATGGTTCTGTGCAGAATTTTCTCACCAATTACTAGCCTaGAGATCTTGGATAAGCTGCACTCTCCTCTGCCCTCAGTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: HWEWFCAEFSHQLLA*RSWISCTLLCPQSP Trigger: TGGAGACTGAGGGCAGAGGAGAGTGCAGCTTATCCAAGATCTCAAGGCTAGTAATTGGTGAGAAAATTCTGCACAGAACCATTCCCAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000627163.2 ENST00000627575.1 |
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| CDS CAA 90 bp | ATGGTTCTGTGCAGAATTTTCTCACCAATTACTAGCCTTGAGATCTaGGATAAGCTGCACTCTCCTCTGCCCTCAGTCTCCATTGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: MVLCRIFSPITSLEI*DKLHSPLPSVSIAG Trigger: TCCTGCAATGGAGACTGAGGGCAGAGGAGAGTGCAGCTTATCCAAGATCTCAAGGCTAGTAATTGGTGAGAAAATTCTGCACAGAACCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000627163.2 |
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| CDS GCA 72 bp | AACATCCTTGCAAAATCGCAAAGAAGTGTCCACTGCTaGTTTAGAGCTGGCCAAAAGGATGAGCCAAACAGG | + |
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Preference number: 6 (lower is better) Translates to: NILAKSQRSVHC*FRAGQKDEPNR Trigger: CCTGTTTGGCTCATCCTTTTGGCCAGCTCTAAAGCAGCAGTGGACACTTCTTTGCGATTTTGCAAGGATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000627163.2 ENST00000627575.1 ENST00000628853.1 |
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| CDS CCA 72 bp | GCAGAATTTTCTCACCAATTACTAGCCTTGAGATCTTaGATAAGCTGCACTCTCCTCTGCCCTCAGTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: AEFSHQLLALRS*ISCTLLCPQSP Trigger: TGGAGACTGAGGGCAGAGGAGAGTGCAGCTTATCCAAGATCTCAAGGCTAGTAATTGGTGAGAAAATTCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000627163.2 ENST00000627575.1 |
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| CDS CCA 72 bp | AAAGGAGCCGTGTTGAGCTTGCAACCATTTTTGGAGTaGGGCATCTTTAACCCTGTCTTGATGGTTTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: KGAVLSLQPFLE*GIFNPVLMVLR Trigger: CCTCAAAACCATCAAGACAGGGTTAAAGATGCCCCACTCCAAAAATGGTTGCAAGCTCAACACGGCTCCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000627575.1 |
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| CDS CAA 72 bp | TGCAGAATTTTCTCACCAATTACTAGCCTTGAGATCTaGGATAAGCTGCACTCTCCTCTGCCCTCAGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: CRIFSPITSLEI*DKLHSPLPSVS Trigger: GGAGACTGAGGGCAGAGGAGAGTGCAGCTTATCCAAGATCTCAAGGCTAGTAATTGGTGAGAAAATTCTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000627163.2 ENST00000627575.1 |
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| CDS GCA 72 bp | ACAAACATCCTTGCAAAATCGCAAAGAAGTGTCCACTaGTGCTTTAGAGCTGGCCAAAAGGATGAGCCAAAC | + |
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Preference number: 6 (lower is better) Translates to: TNILAKSQRSVH*CFRAGQKDEPN Trigger: GTTTGGCTCATCCTTTTGGCCAGCTCTAAAGCAGCAGTGGACACTTCTTTGCGATTTTGCAAGGATGTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000627163.2 ENST00000627575.1 ENST00000628853.1 |
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| CDS TCA 72 bp | TTAGAACATCTCTCTGCAAGGATCCTTCAGGCTTCATaGGCCTTTGGTAGCTTCCATATTTGTTTGCTTGAA | + |
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Preference number: 6 (lower is better) Translates to: LEHLSARILQAS*AFGSFHICLLE Trigger: TTCAAGCAAACAAATATGGAAGCTACCAAAGGCTCATGAAGCCTGAAGGATCCTTGCAGAGAGATGTTCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000627163.2 ENST00000627575.1 |
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| CDS CAA 72 bp | TTTTCTAGGAGTTACAAAGTACATTCACAAACATCCTaGCAAAATCGCAAAGAAGTGTCCACTGCTGCTTTA | + |
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Preference number: 6 (lower is better) Translates to: FSRSYKVHSQTS*QNRKEVSTAAL Trigger: TAAAGCAGCAGTGGACACTTCTTTGCGATTTTGCAAGGATGTTTGTGAATGTACTTTGTAACTCCTAGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000627163.2 ENST00000627575.1 |
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| CDS GCA 72 bp | AATTTACATACAGGGATTTCTTTGATGGAATTTTCCTaGTTATCTAAAGCTTCAAGCAGCCTAAGAAAACAG | + |
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Preference number: 6 (lower is better) Translates to: NLHTGISLMEFS*LSKASSSLRKQ Trigger: CTGTTTTCTTAGGCTGCTTGAAGCTTTAGATAAGCAGGAAAATTCCATCAAAGAAATCCCTGTATGTAAATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000627163.2 ENST00000627575.1 |
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