Pregenerated sensors for LINC01096 (Homo sapiens)
Ensembl gene IDs: ENSG00000246095Ensembl transcript IDs: ENST00000501050.1, ENST00000503938.1
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CTACGTGCCGCGCCCTTCGGTCCCCGGAACCGCCCGGGCTGGGGGTaGTGCTGCGCGGTGAGACTTCCGCGGGCGGCGGGCGGAGAGCGG | + |
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Preference number: 5 (lower is better) Translates to: LRAAPFGPRNRPGWG*CCAVRLPRAAGGER Trigger: CCGCTCTCCGCCCGCCGCCCGCGGAAGTCTCACCGCGCAGCAGCACCCCCAGCCCGGGCGGTTCCGGGGACCGAAGGGCGCGGCACGTAG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000501050.1 |
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| CDS CCA 90 bp | CTTTGTCTTCTTCCTCCTCCCTCCTCCTGCTTCTCCTCCGCAGTTTaGATCCTACGGGCCCCCTACGTGCCGCGCCCTTCGGTCCCCGGA | + |
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Preference number: 5 (lower is better) Translates to: LCLLPPPSSCFSSAV*ILRAPYVPRPSVPG Trigger: TCCGGGGACCGAAGGGCGCGGCACGTAGGGGGCCCGTAGGATCCAAACTGCGGAGGAGAAGCAGGAGGAGGGAGGAGGAAGAAGACAAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000501050.1 |
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| CDS CCA 90 bp | AGTCGATCATTAGGTCTGTGGGTGACTGTAGGCAGAGCCGGGAGTTaGGTGCTTGGCGCGGAGGGTGAACTCGCGGGTCTTGAGCTGCAA | + |
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Preference number: 5 (lower is better) Translates to: SRSLGLWVTVGRAGS*VLGAEGELAGLELQ Trigger: TTGCAGCTCAAGACCCGCGAGTTCACCCTCCGCGCCAAGCACCCAACTCCCGGCTCTGCCTACAGTCACCCACAGACCTAATGATCGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000501050.1 |
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| CDS CCA 90 bp | AGGAGATTGACACTGGTTGCCTGGAAGGTAGGGGACGGGCAGGTATaGGTTTGGTGTCCCGTACAGCGATCGCTTTGTGGGTTTAGTACT | + |
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Preference number: 5 (lower is better) Translates to: RRLTLVAWKVGDGQV*VWCPVQRSLCGFST Trigger: AGTACTAAACCCACAAAGCGATCGCTGTACGGGACACCAAACCCATACCTGCCCGTCCCCTACCTTCCAGGCAACCAGTGTCAATCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000501050.1 |
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| CDS GCA 90 bp | TGTCAGTGCTCAGCAAGTGTAAGGACGCAGAGTGGAACAGCAGAATaGTTACAGTCTTTCAAAAACAGTGTGTCCTCTCCTCCCCCGCTG | + |
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Preference number: 5 (lower is better) Translates to: CQCSASVRTQSGTAE*LQSFKNSVSSPPPL Trigger: CAGCGGGGGAGGAGAGGACACACTGTTTTTGAAAGACTGTAAGCATTCTGCTGTTCCACTCTGCGTCCTTACACTTGCTGAGCACTGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000501050.1 |
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| CDS CCA 90 bp | TCCTGCCACAGCCTTGGGCAGAAGTCTTCAAAGCATGAAAAGATGTaGTTTGGCGACTTTGAGTTGTCGGGTATTTTTGTGTCCCAGGAG | + |
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Preference number: 5 (lower is better) Translates to: SCHSLGQKSSKHEKM*FGDFELSGIFVSQE Trigger: CTCCTGGGACACAAAAATACCCGACAACTCAAAGTCGCCAAACCACATCTTTTCATGCTTTGAAGACTTCTGCCCAAGGCTGTGGCAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000501050.1 ENST00000503938.1 |
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| CDS CCA 90 bp | CTGTATTATTTAAATTACCGTTCTCCTCACTTCGGGCAGGGATGTTaGGAATTATGTATAGTGAGGAGATTGACACTGGTTGCCTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: LYYLNYRSPHFGQGC*ELCIVRRLTLVAWK Trigger: CTTCCAGGCAACCAGTGTCAATCTCCTCACTATACATAATTCCCAACATCCCTGCCCGAAGTGAGGAGAACGGTAATTTAAATAATACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000501050.1 |
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| CDS GCA 90 bp | ATTCGATGTTTAAAAAGAATCCCAAATCACAGTTGGACATACTCCTaGCACAGCCTTGGGCAGAAGTCTTCAAAGCATGAAAAGATGTGG | + |
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Preference number: 5 (lower is better) Translates to: IRCLKRIPNHSWTYS*HSLGQKSSKHEKMW Trigger: CCACATCTTTTCATGCTTTGAAGACTTCTGCCCAAGGCTGTGGCAGGAGTATGTCCAACTGTGATTTGGGATTCTTTTTAAACATCGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000501050.1 |
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| CDS GCA 72 bp | CCCTTCGGTCCCCGGAACCGCCCGGGCTGGGGGTGCTaGTGCGCGGTGAGACTTCCGCGGGCGGCGGGCGGA | + |
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Preference number: 6 (lower is better) Translates to: PFGPRNRPGWGC*CAVRLPRAAGG Trigger: TCCGCCCGCCGCCCGCGGAAGTCTCACCGCGCAGCAGCACCCCCAGCCCGGGCGGTTCCGGGGACCGAAGGG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000501050.1 |
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| CDS CCA 72 bp | CGTGCCGCGCCCTTCGGTCCCCGGAACCGCCCGGGCTaGGGGTGCTGCTGCGCGGTGAGACTTCCGCGGGCG | + |
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Preference number: 6 (lower is better) Translates to: RAAPFGPRNRPG*GCCCAVRLPRA Trigger: CGCCCGCGGAAGTCTCACCGCGCAGCAGCACCCCCAGCCCGGGCGGTTCCGGGGACCGAAGGGCGCGGCACG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000501050.1 |
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| CDS GCA 72 bp | TTCGGTCCCCGGAACCGCCCGGGCTGGGGGTGCTGCTaGGCGGTGAGACTTCCGCGGGCGGCGGGCGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: FGPRNRPGWGCC*AVRLPRAAGGE Trigger: CTCTCCGCCCGCCGCCCGCGGAAGTCTCACCGCGCAGCAGCACCCCCAGCCCGGGCGGTTCCGGGGACCGAA 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000501050.1 |
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| CDS GCA 72 bp | TCTCCTCCGCAGTTTGGATCCTACGGGCCCCCTACGTaGCGCGCCCTTCGGTCCCCGGAACCGCCCGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: SPPQFGSYGPPT*RALRSPEPPGL Trigger: CAGCCCGGGCGGTTCCGGGGACCGAAGGGCGCGGCACGTAGGGGGCCCGTAGGATCCAAACTGCGGAGGAGA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000501050.1 |
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| CDS CCA 72 bp | CTTCCTCCTCCCTCCTCCTGCTTCTCCTCCGCAGTTTaGATCCTACGGGCCCCCTACGTGCCGCGCCCTTCG | + |
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Preference number: 6 (lower is better) Translates to: LPPPSSCFSSAV*ILRAPYVPRPS Trigger: CGAAGGGCGCGGCACGTAGGGGGCCCGTAGGATCCAAACTGCGGAGGAGAAGCAGGAGGAGGGAGGAGGAAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000501050.1 |
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| CDS CAA 90 bp | CCTTTGTCTTCTTCCTCCTCCCTCCTCCTGCTTCTCCTCCGCAGTTaGGATCCTACGGGCCCCCTACGTGCCGCGCCCTTCGGTCCCCGG | + |
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Preference number: 6 (lower is better) Translates to: PLSSSSSLLLLLLRS*DPTGPLRAAPFGPR Trigger: CCGGGGACCGAAGGGCGCGGCACGTAGGGGGCCCGTAGGATCCAAACTGCGGAGGAGAAGCAGGAGGAGGGAGGAGGAAGAAGACAAAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000501050.1 |
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| CDS CAA 72 bp | TCTTCCTCCTCCCTCCTCCTGCTTCTCCTCCGCAGTTaGGATCCTACGGGCCCCCTACGTGCCGCGCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: SSSSLLLLLLRS*DPTGPLRAAPF Trigger: GAAGGGCGCGGCACGTAGGGGGCCCGTAGGATCCAAACTGCGGAGGAGAAGCAGGAGGAGGGAGGAGGAAGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000501050.1 |
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| CDS CCA 72 bp | TTAGGTCTGTGGGTGACTGTAGGCAGAGCCGGGAGTTaGGTGCTTGGCGCGGAGGGTGAACTCGCGGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: LGLWVTVGRAGS*VLGAEGELAGL Trigger: AAGACCCGCGAGTTCACCCTCCGCGCCAAGCACCCAACTCCCGGCTCTGCCTACAGTCACCCACAGACCTAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000501050.1 |
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| CDS CCA 72 bp | CCGCGTCTTCCGGAGGCGCACAGCAAGGGAGTCTCCTaGTGTCATCTCGGGCCATTACGGCGCTTAGTCGAT | + |
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Preference number: 6 (lower is better) Translates to: PRLPEAHSKGVS*CHLGPLRRLVD Trigger: ATCGACTAAGCGCCGTAATGGCCCGAGATGACACCAGGAGACTCCCTTGCTGTGCGCCTCCGGAAGACGCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000501050.1 |
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| CDS CCA 72 bp | ACACTGGTTGCCTGGAAGGTAGGGGACGGGCAGGTATaGGTTTGGTGTCCCGTACAGCGATCGCTTTGTGGG | + |
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Preference number: 6 (lower is better) Translates to: TLVAWKVGDGQV*VWCPVQRSLCG Trigger: CCCACAAAGCGATCGCTGTACGGGACACCAAACCCATACCTGCCCGTCCCCTACCTTCCAGGCAACCAGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000501050.1 |
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| CDS CCA 72 bp | CGGGCCATTACGGCGCTTAGTCGATCATTAGGTCTGTaGGTGACTGTAGGCAGAGCCGGGAGTTGGGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: RAITALSRSLGL*VTVGRAGSWVL Trigger: AAGCACCCAACTCCCGGCTCTGCCTACAGTCACCCACAGACCTAATGATCGACTAAGCGCCGTAATGGCCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000501050.1 |
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| CDS CAA 90 bp | GAGGGTGAACTCGCGGGTCTTGAGCTGCAACTAGAAGCTGCTCCTTaGTCTTCTTCCTCCTCCCTCCTCCTGCTTCTCCTCCGCAGTTTG | + |
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Preference number: 6 (lower is better) Translates to: EGELAGLELQLEAAP*SSSSSLLLLLLRSL Trigger: CAAACTGCGGAGGAGAAGCAGGAGGAGGGAGGAGGAAGAAGACAAAGGAGCAGCTTCTAGTTGCAGCTCAAGACCCGCGAGTTCACCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000501050.1 |
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| CDS CCA 72 bp | GAATTATGTATAGTGAGGAGATTGACACTGGTTGCCTaGAAGGTAGGGGACGGGCAGGTATGGGTTTGGTGT | + |
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Preference number: 6 (lower is better) Translates to: ELCIVRRLTLVA*KVGDGQVWVWC Trigger: ACACCAAACCCATACCTGCCCGTCCCCTACCTTCCAGGCAACCAGTGTCAATCTCCTCACTATACATAATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000501050.1 |
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| CDS CAA 72 bp | AGATGTGGTTTGGCGACTTTGAGTTGTCGGGTATTTTaGTGTCCCAGGAGTGTGAGAAAGGGGCTACGTTCC | + |
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Preference number: 6 (lower is better) Translates to: RCGLATLSCRVF*CPRSVRKGLRS Trigger: GGAACGTAGCCCCTTTCTCACACTCCTGGGACACAAAAATACCCGACAACTCAAAGTCGCCAAACCACATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000501050.1 ENST00000503938.1 |
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| CDS CAA 90 bp | TTGGGCAGAAGTCTTCAAAGCATGAAAAGATGTGGTTTGGCGACTTaGAGTTGTCGGGTATTTTTGTGTCCCAGGAGTGTGAGAAAGGGG | + |
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Preference number: 6 (lower is better) Translates to: LGRSLQSMKRCGLAT*SCRVFLCPRSVRKG Trigger: CCCCTTTCTCACACTCCTGGGACACAAAAATACCCGACAACTCAAAGTCGCCAAACCACATCTTTTCATGCTTTGAAGACTTCTGCCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000501050.1 ENST00000503938.1 |
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| CDS CAA 90 bp | TTGCAGCATCTATACTTTTCAGCATTTCGGTTACATGATGCTTTCTaGCTTTGTGCAAACCTTGTAGGGTACTCCTGCCACAGCCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: LQHLYFSAFRLHDAF*LCANLVGYSCHSLG Trigger: CCCAAGGCTGTGGCAGGAGTACCCTACAAGGTTTGCACAAAGCAAGAAAGCATCATGTAACCGAAATGCTGAAAAGTATAGATGCTGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503938.1 |
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| CDS GCA 72 bp | TCAGCAAGTGTAAGGACGCAGAGTGGAACAGCAGAATaGTTACAGTCTTTCAAAAACAGTGTGTCCTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: SASVRTQSGTAE*LQSFKNSVSSP Trigger: AGGAGAGGACACACTGTTTTTGAAAGACTGTAAGCATTCTGCTGTTCCACTCTGCGTCCTTACACTTGCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000501050.1 |
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| CDS CCA 72 bp | TTGGTGTCAGTGCTCAGCAAGTGTAAGGACGCAGAGTaGAACAGCAGAATGCTTACAGTCTTTCAAAAACAG | + |
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Preference number: 6 (lower is better) Translates to: LVSVLSKCKDAE*NSRMLTVFQKQ Trigger: CTGTTTTTGAAAGACTGTAAGCATTCTGCTGTTCCACTCTGCGTCCTTACACTTGCTGAGCACTGACACCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000501050.1 |
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| CDS CCA 72 bp | AGCCTTGGGCAGAAGTCTTCAAAGCATGAAAAGATGTaGTTTGGCGACTTTGAGTTGTCGGGTATTTTTGTG | + |
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Preference number: 6 (lower is better) Translates to: SLGQKSSKHEKM*FGDFELSGIFV Trigger: CACAAAAATACCCGACAACTCAAAGTCGCCAAACCACATCTTTTCATGCTTTGAAGACTTCTGCCCAAGGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000501050.1 ENST00000503938.1 |
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| CDS CAA 72 bp | AGTCTTCAAAGCATGAAAAGATGTGGTTTGGCGACTTaGAGTTGTCGGGTATTTTTGTGTCCCAGGAGTGTG | + |
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Preference number: 6 (lower is better) Translates to: SLQSMKRCGLAT*SCRVFLCPRSV Trigger: CACACTCCTGGGACACAAAAATACCCGACAACTCAAAGTCGCCAAACCACATCTTTTCATGCTTTGAAGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000501050.1 ENST00000503938.1 |
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| CDS CAA 90 bp | GCTGTATTATTTAAATTACCGTTCTCCTCACTTCGGGCAGGGATGTaGGGAATTATGTATAGTGAGGAGATTGACACTGGTTGCCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: AVLFKLPFSSLRAGM*GIMYSEEIDTGCLE Trigger: TTCCAGGCAACCAGTGTCAATCTCCTCACTATACATAATTCCCAACATCCCTGCCCGAAGTGAGGAGAACGGTAATTTAAATAATACAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000501050.1 |
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| CDS CAA 90 bp | CAGCTCTTTACAATTACATCAGTTTTGAAGGAACGCCATTTAAATTaGGTGTCAGTGCTCAGCAAGTGTAAGGACGCAGAGTGGAACAGC | + |
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Preference number: 6 (lower is better) Translates to: QLFTITSVLKERHLN*VSVLSKCKDAEWNS Trigger: GCTGTTCCACTCTGCGTCCTTACACTTGCTGAGCACTGACACCAAATTTAAATGGCGTTCCTTCAAAACTGATGTAATTGTAAAGAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000501050.1 |
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| CDS GCA 72 bp | TTAAAAAGAATCCCAAATCACAGTTGGACATACTCCTaGCACAGCCTTGGGCAGAAGTCTTCAAAGCATGAA | + |
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Preference number: 6 (lower is better) Translates to: LKRIPNHSWTYS*HSLGQKSSKHE Trigger: TTCATGCTTTGAAGACTTCTGCCCAAGGCTGTGGCAGGAGTATGTCCAACTGTGATTTGGGATTCTTTTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000501050.1 |
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| CDS CCA 72 bp | TTAAATTACCGTTCTCCTCACTTCGGGCAGGGATGTTaGGAATTATGTATAGTGAGGAGATTGACACTGGTT | + |
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Preference number: 6 (lower is better) Translates to: LNYRSPHFGQGC*ELCIVRRLTLV Trigger: AACCAGTGTCAATCTCCTCACTATACATAATTCCCAACATCCCTGCCCGAAGTGAGGAGAACGGTAATTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000501050.1 |
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| CDS CAA 72 bp | TCAAAGCATGAAAAGATGTGGTTTGGCGACTTTGAGTaGTCGGGTATTTTTGTGTCCCAGGAGTGTGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: SKHEKMWFGDFE*SGIFVSQECEK Trigger: TTTCTCACACTCCTGGGACACAAAAATACCCGACAACTCAAAGTCGCCAAACCACATCTTTTCATGCTTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000501050.1 ENST00000503938.1 |
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| CDS CAA 72 bp | TTTAAATTACCGTTCTCCTCACTTCGGGCAGGGATGTaGGGAATTATGTATAGTGAGGAGATTGACACTGGT | + |
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Preference number: 6 (lower is better) Translates to: FKLPFSSLRAGM*GIMYSEEIDTG Trigger: ACCAGTGTCAATCTCCTCACTATACATAATTCCCAACATCCCTGCCCGAAGTGAGGAGAACGGTAATTTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000501050.1 |
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| CDS CAA 72 bp | CTATACTTTTCAGCATTTCGGTTACATGATGCTTTCTaGCTTTGTGCAAACCTTGTAGGGTACTCCTGCCAC | + |
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Preference number: 6 (lower is better) Translates to: LYFSAFRLHDAF*LCANLVGYSCH Trigger: GTGGCAGGAGTACCCTACAAGGTTTGCACAAAGCAAGAAAGCATCATGTAACCGAAATGCTGAAAAGTATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503938.1 |
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| CDS CAA 72 bp | ACAATTACATCAGTTTTGAAGGAACGCCATTTAAATTaGGTGTCAGTGCTCAGCAAGTGTAAGGACGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: TITSVLKERHLN*VSVLSKCKDAE Trigger: CTCTGCGTCCTTACACTTGCTGAGCACTGACACCAAATTTAAATGGCGTTCCTTCAAAACTGATGTAATTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000501050.1 |
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| CDS TCA 72 bp | GGTTGTTCTTTTTCTGCACCGCAGAAGGAAATACACTaGCTATTCATAGTTCTCAGTCTCAGAATGAGGTTT | + |
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Preference number: 6 (lower is better) Translates to: GCSFSAPQKEIH*LFIVLSLRMRF Trigger: AAACCTCATTCTGAGACTGAGAACTATGAATAGTCAGTGTATTTCCTTCTGCGGTGCAGAAAAAGAACAACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000501050.1 ENST00000503938.1 |
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| CDS CAA 72 bp | CTATACTTTTCAGCATTTCGGTTACATGATGCTTTCTaGCTTTGTGCAAACCTTGTAGGGTACCTGGGAAAA | + |
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Preference number: 6 (lower is better) Translates to: LYFSAFRLHDAF*LCANLVGYLGK Trigger: TTTTCCCAGGTACCCTACAAGGTTTGCACAAAGCAAGAAAGCATCATGTAACCGAAATGCTGAAAAGTATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000501050.1 |
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| CDS CAA 90 bp | GGAAATACACTGACTATTCATAGTTCTCAGTCTCAGAATGAGGTTTaGCAGCATCTATACTTTTCAGCATTTCGGTTACATGATGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: GNTLTIHSSQSQNEV*QHLYFSAFRLHDAF Trigger: GAAAGCATCATGTAACCGAAATGCTGAAAAGTATAGATGCTGCAAAACCTCATTCTGAGACTGAGAACTATGAATAGTCAGTGTATTTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000501050.1 ENST00000503938.1 |
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| CDS CAA 72 bp | CTGACTATTCATAGTTCTCAGTCTCAGAATGAGGTTTaGCAGCATCTATACTTTTCAGCATTTCGGTTACAT | + |
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Preference number: 6 (lower is better) Translates to: LTIHSSQSQNEV*QHLYFSAFRLH Trigger: ATGTAACCGAAATGCTGAAAAGTATAGATGCTGCAAAACCTCATTCTGAGACTGAGAACTATGAATAGTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000501050.1 ENST00000503938.1 |
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