Pregenerated sensors for LINC01095 (Homo sapiens)
Ensembl gene IDs: ENSG00000248809Ensembl transcript IDs: ENST00000503593.1, ENST00000505848.1, ENST00000507726.5, ENST00000512063.5, ENST00000513023.1, ENST00000515703.1, ENST00000652178.1, ENST00000652711.1
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGTGTGGGCCCGACCCCGAGAGCAGACCAGGGCTGCGGTCAGAGCTaGTCGCCAGATGAGGACGCCTGGGCAGCTGGCCTGTGCCTGAGC | + |
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Preference number: 5 (lower is better) Translates to: GVGPTPRADQGCGQS*SPDEDAWAAGLCLS Trigger: GCTCAGGCACAGGCCAGCTGCCCAGGCGTCCTCATCTGGCGACCAGCTCTGACCGCAGCCCTGGTCTGCTCTCGGGGTCGGGCCCACACC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507726.5 |
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| CDS TCA 90 bp | GACCCCGAGAGCAGACCAGGGCTGCGGTCAGAGCTGGTCGCCAGATaGGGACGCCTGGGCAGCTGGCCTGTGCCTGAGCAGAGGTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: DPESRPGLRSELVAR*GRLGSWPVPEQRWL Trigger: CAGCCACCTCTGCTCAGGCACAGGCCAGCTGCCCAGGCGTCCTCATCTGGCGACCAGCTCTGACCGCAGCCCTGGTCTGCTCTCGGGGTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507726.5 |
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| CDS GCA 90 bp | AGGAAGAAGAGGGGTGTGGGCCCGACCCCGAGAGCAGACCAGGGCTaGGGTCAGAGCTGGTCGCCAGATGAGGACGCCTGGGCAGCTGGC | + |
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Preference number: 5 (lower is better) Translates to: RKKRGVGPTPRADQG*GQSWSPDEDAWAAG Trigger: GCCAGCTGCCCAGGCGTCCTCATCTGGCGACCAGCTCTGACCGCAGCCCTGGTCTGCTCTCGGGGTCGGGCCCACACCCCTCTTCTTCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000507726.5 |
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| CDS CCA 90 bp | GCATGCCAGGCTAGTACAGCTCTCAATCAGGGCTGCGGTCAGAGCTaGTCGCCAGATGAGGACGCCTGGGCAGCTGGCCTGTGCCTGAGC | + |
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Preference number: 5 (lower is better) Translates to: ACQASTALNQGCGQS*SPDEDAWAAGLCLS Trigger: GCTCAGGCACAGGCCAGCTGCCCAGGCGTCCTCATCTGGCGACCAGCTCTGACCGCAGCCCTGATTGAGAGCTGTACTAGCCTGGCATGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652178.1 |
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| CDS GCA 90 bp | AAGCTGCTGTCTGCATGCCAGGCTAGTACAGCTCTCAATCAGGGCTaGGGTCAGAGCTGGTCGCCAGATGAGGACGCCTGGGCAGCTGGC | + |
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Preference number: 5 (lower is better) Translates to: KLLSACQASTALNQG*GQSWSPDEDAWAAG Trigger: GCCAGCTGCCCAGGCGTCCTCATCTGGCGACCAGCTCTGACCGCAGCCCTGATTGAGAGCTGTACTAGCCTGGCATGCAGACAGCAGCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652178.1 |
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| CDS GCA 90 bp | GGAAGCCGCCAGAAGGCAGATCTGATTCTAAAGCTGCTGTCTGCATaGCAGGCTAGTACAGCTCTCAATCAGGGCTGCGGTCAGAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: GSRQKADLILKLLSA*QASTALNQGCGQSW Trigger: CCAGCTCTGACCGCAGCCCTGATTGAGAGCTGTACTAGCCTGGCATGCAGACAGCAGCTTTAGAATCAGATCTGCCTTCTGGCGGCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652178.1 |
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| CDS GCA 90 bp | GGAAGCCGCCAGAAGGCAGATCTGATTCTAAAGCTGCTGTCTGCATaGCAGGCTAGTACAGCTCTCAATCTGCAGCAGGACTGGCCACCT | + |
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Preference number: 5 (lower is better) Translates to: GSRQKADLILKLLSA*QASTALNLQQDWPP Trigger: AGGTGGCCAGTCCTGCTGCAGATTGAGAGCTGTACTAGCCTGGCATGCAGACAGCAGCTTTAGAATCAGATCTGCCTTCTGGCGGCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652711.1 |
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| CDS CCA 90 bp | ACCGCAGGAGGAGAAGAGTGTCCTGCCTTCTTCGTGTGTGTGTCTTaGCCTCTCCAGCCTGCTGACTCTCTGAATGCTTTGCGTTCAGTC | + |
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Preference number: 5 (lower is better) Translates to: TAGGEECPAFFVCVS*PLQPADSLNALRSV Trigger: GACTGAACGCAAAGCATTCAGAGAGTCAGCAGGCTGGAGAGGCCAAGACACACACACGAAGAAGGCAGGACACTCTTCTCCTCCTGCGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000507726.5 ENST00000512063.5 |
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| CDS CCA 90 bp | GTGACTGAGAAGTCCCACCACAGTCCATCTGCAAGCTGGAGACCCTaGGACGCAGGTAGTGTGGCTTCACAGCAAGTTCAAAGACCTCAG | + |
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Preference number: 5 (lower is better) Translates to: VTEKSHHSPSASWRP*DAGSVASQQVQRPQ Trigger: CTGAGGTCTTTGAACTTGCTGTGAAGCCACACTACCTGCGTCCCAGGGTCTCCAGCTTGCAGATGGACTGTGGTGGGACTTCTCAGTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000507726.5 ENST00000512063.5 |
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| CDS GCA 90 bp | TTTTGGAATTTACTCCAGTGTCAAGCAGGAGGTGGTGGAGGAAGCTaGTGGCCACTGGGTGCTGGTGACTGCTACTTGCTGCAGGAACCT | + |
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Preference number: 5 (lower is better) Translates to: FWNLLQCQAGGGGGS*WPLGAGDCYLLQEP Trigger: AGGTTCCTGCAGCAAGTAGCAGTCACCAGCACCCAGTGGCCAGCAGCTTCCTCCACCACCTCCTGCTTGACACTGGAGTAAATTCCAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000503593.1 ENST00000652711.1 |
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| CDS TCA 90 bp | GGACTTGATTCCGTAGTGATGGTGGAAAGCAGTGGTGGACTATCGTaGGCTCTGGAGCCAGCCTGCCTGGTTTTGCTCTTGGACTTGATC | + |
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Preference number: 5 (lower is better) Translates to: GLDSVVMVESSGGLS*ALEPACLVLLLDLI Trigger: GATCAAGTCCAAGAGCAAAACCAGGCAGGCTGGCTCCAGAGCTCACGATAGTCCACCACTGCTTTCCACCATCACTACGGAATCAAGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000507726.5 ENST00000512063.5 ENST00000652178.1 |
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| CDS GCA 90 bp | GGAGGTGAGAGAGGAAGATCAAGAAGGGTTTTCCCAAGTTACGGTTaGAACGCAAGAAAGGGAAAGGTGAGAAGAGGGACCCGAGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: GGERGRSRRVFPSYG*NARKGKVRRGTRAQ Trigger: CTGGGCTCGGGTCCCTCTTCTCACCTTTCCCTTTCTTGCGTTGCAACCGTAACTTGGGAAAACCCTTCTTGATCTTCCTCTCTCACCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507726.5 |
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| CDS CCA 90 bp | TCAATCTTGGTGACTGAGAAGTCCCACCACAGTCCATCTGCAAGCTaGAGACCCTGGGACGCAGGTAGTGTGGCTTCACAGCAAGTTCAA | + |
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Preference number: 5 (lower is better) Translates to: SILVTEKSHHSPSAS*RPWDAGSVASQQVQ Trigger: TTGAACTTGCTGTGAAGCCACACTACCTGCGTCCCAGGGTCTCCAGCTTGCAGATGGACTGTGGTGGGACTTCTCAGTCACCAAGATTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000507726.5 ENST00000512063.5 |
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| CDS CCA 90 bp | AAGCTGCTGTCTGCATGCCAGGCTAGTACAGCTCTCAATCTTGGATaGGGGTATCCTAACCCAGCGGTGGCCTTAGTCACGTCATACTTC | + |
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Preference number: 5 (lower is better) Translates to: KLLSACQASTALNLG*GYPNPAVALVTSYF Trigger: GAAGTATGACGTGACTAAGGCCACCGCTGGGTTAGGATACCCCCATCCAAGATTGAGAGCTGTACTAGCCTGGCATGCAGACAGCAGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513023.1 |
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| CDS TCA 90 bp | CAGTCCTGTTCTCCTTCACAAATGAAGCATCCACAGCACAATTGGTaGCTTCACAAAGGTCCCATGGCTCCTAGGTGGGAAGCCGCCAGA | + |
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Preference number: 5 (lower is better) Translates to: QSCSPSQMKHPQHNW*LHKGPMAPRWEAAR Trigger: TCTGGCGGCTTCCCACCTAGGAGCCATGGGACCTTTGTGAAGTCACCAATTGTGCTGTGGATGCTTCATTTGTGAAGGAGAACAGGACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000505848.1 ENST00000507726.5 ENST00000512063.5 ENST00000513023.1 ENST00000515703.1 ENST00000652178.1 ENST00000652711.1 |
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| CDS TCA 90 bp | GAGCGTGGACATACTTTCAAGTTCCAGCACGTAGATCCATGGTCATaGTCGGGTGGCCCAAAACTGCCTGCCTTAATGAAGATGCTCCCG | + |
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Preference number: 5 (lower is better) Translates to: ERGHTFKFQHVDPWS*SGGPKLPALMKMLP Trigger: CGGGAGCATCTTCATTAAGGCAGGCAGTTTTGGGCCACCCGATCATGACCATGGATCTACGTGCTGGAACTTGAAAGTATGTCCACGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652711.1 |
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| CDS GCA 90 bp | GGAAGCCGCCAGAAGGCAGATCTGATTCTAAAGCTGCTGTCTGCATaGCAGGCTAGTACAGCTCTCAATCTTGGATGGGGGTATCCTAAC | + |
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Preference number: 5 (lower is better) Translates to: GSRQKADLILKLLSA*QASTALNLGWGYPN Trigger: GTTAGGATACCCCCATCCAAGATTGAGAGCTGTACTAGCCTGGCATGCAGACAGCAGCTTTAGAATCAGATCTGCCTTCTGGCGGCTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000513023.1 |
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| CDS GCA 90 bp | GTCAAGACATCCACCCTCTGTCTCCACCACCATTGCAGCTCATCCTaGTTGGCTCTCTCCTTGATAATCCCAGGGTTTGCTTCCAAATGG | + |
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Preference number: 5 (lower is better) Translates to: VKTSTLCLHHHCSSS*LALSLIIPGFASKW Trigger: CCATTTGGAAGCAAACCCTGGGATTATCAAGGAGAGAGCCAAGCAGGATGAGCTGCAATGGTGGTGGAGACAGAGGGTGGATGTCTTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652711.1 |
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| CDS CCA 90 bp | GTGGCTCTTGAACTTTATGTGTCGGGAAGGAGGCAAGGGCTGAACTaGAGAGTGGGCCATTCATTTAGTTCCAGCGTCCCAGGAAATGCT | + |
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Preference number: 5 (lower is better) Translates to: VALELYVSGRRQGLN*RVGHSFSSSVPGNA Trigger: AGCATTTCCTGGGACGCTGGAACTAAATGAATGGCCCACTCTCCAGTTCAGCCCTTGCCTCCTTCCCGACACATAAAGTTCAAGAGCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000507726.5 ENST00000652178.1 |
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| CDS CCA 90 bp | GCCAAAGTCCATTACATTCCATCTAATGATAGGTCTGTTGGCAGGTaGGGGGAGGCTATCAGCAACTCACCTTGTCCAGTACCCTCCTGT | + |
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Preference number: 5 (lower is better) Translates to: AKVHYIPSNDRSVGR*GEAISNSPCPVPSC Trigger: ACAGGAGGGTACTGGACAAGGTGAGTTGCTGATAGCCTCCCCCCACCTGCCAACAGACCTATCATTAGATGGAATGTAATGGACTTTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505848.1 |
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| CDS CCA 90 bp | CTTCTTGGGTGTCAAGGAAGCTATTCACAGGGTGGTGCCATGTTTTaGAATTTACTCCAGTGTCAAGCAGGAGGTGGTGGAGGAAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: LLGCQGSYSQGGAMF*NLLQCQAGGGGGSC Trigger: GCAGCTTCCTCCACCACCTCCTGCTTGACACTGGAGTAAATTCCAAAACATGGCACCACCCTGTGAATAGCTTCCTTGACACCCAAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000503593.1 ENST00000652711.1 |
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| CDS CCA 90 bp | ACATACTTTCAAGTTCCAGCACGTAGATCCATGGTCATGATCGGGTaGCCCAAAACTGCCTGCCTTAATGAAGATGCTCCCGGGCCTGTT | + |
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Preference number: 5 (lower is better) Translates to: TYFQVPARRSMVMIG*PKTACLNEDAPGPV Trigger: AACAGGCCCGGGAGCATCTTCATTAAGGCAGGCAGTTTTGGGCCACCCGATCATGACCATGGATCTACGTGCTGGAACTTGAAAGTATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652711.1 |
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| CDS TCA 90 bp | TCCTTCTGGAAAATCCAGATGGCATCCATGCAACCGCAGTCTAATTaGCCTTCTTGGGTGTCAAGGAAGCTATTCACAGGGTGGTGCCAT | + |
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Preference number: 5 (lower is better) Translates to: SFWKIQMASMQPQSN*PSWVSRKLFTGWCH Trigger: ATGGCACCACCCTGTGAATAGCTTCCTTGACACCCAAGAAGGTCAATTAGACTGCGGTTGCATGGATGCCATCTGGATTTTCCAGAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000503593.1 ENST00000652711.1 |
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| CDS TCA 90 bp | ATGGTATTGGGGAGTCAGCTTGCTTCAGTGAATAAGAGCAACATTTaGGGAGATGACAGGGCACTGCCTTCTTCGTGTGTGTGTCTTGGC | + |
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Preference number: 5 (lower is better) Translates to: MVLGSQLASVNKSNI*GDDRALPSSCVCLG Trigger: GCCAAGACACACACACGAAGAAGGCAGTGCCCTGTCATCTCCTCAAATGTTGCTCTTATTCACTGAAGCAAGCTGACTCCCCAATACCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000652178.1 ENST00000652711.1 |
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| CDS TCA 90 bp | TATCGTGAGCTCTGGAGCCAGCCTGCCTGGTTTTGCTCTTGGACTTaGTCACTTAATTGCTGTGTGAACTTGAGCAAGTTTCCCATCTGT | + |
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Preference number: 5 (lower is better) Translates to: YRELWSQPAWFCSWT*SLNCCVNLSKFPIC Trigger: ACAGATGGGAAACTTGCTCAAGTTCACACAGCAATTAAGTGATCAAGTCCAAGAGCAAAACCAGGCAGGCTGGCTCCAGAGCTCACGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000507726.5 ENST00000512063.5 ENST00000652178.1 |
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| CDS CCA 90 bp | GCATTTCTTCTTAGCAGGATGTCTGGTATCCAGCTACGTTTTCTCTaGATCCTTCTGGAAAATCCAGATGGCATCCATGCAACCGCAGTC | + |
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Preference number: 5 (lower is better) Translates to: AFLLSRMSGIQLRFL*ILLENPDGIHATAV Trigger: GACTGCGGTTGCATGGATGCCATCTGGATTTTCCAGAAGGATCCAGAGAAAACGTAGCTGGATACCAGACATCCTGCTAAGAAGAAATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000503593.1 ENST00000652711.1 |
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| CDS TCA 90 bp | AAGAGATGGCCATGCAGCTCACAGGAGAAGCAACTGCAACCCAATTaGAGTATTTCAACAGCTGGTTTCATCACCAACAGGAGAAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: KRWPCSSQEKQLQPN*SISTAGFITNRRKL Trigger: CAGCTTTCTCCTGTTGGTGATGAAACCAGCTGTTGAAATACTTCAATTGGGTTGCAGTTGCTTCTCCTGTGAGCTGCATGGCCATCTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652711.1 |
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| CDS GCA 90 bp | GCTACGTTTTCTCTGGATCCTTCTGGAAAATCCAGATGGCATCCATaGAACCGCAGTCTAATTGACCTTCTTGGGTGTCAAGGAAGCTAT | + |
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Preference number: 5 (lower is better) Translates to: ATFSLDPSGKSRWHP*NRSLIDLLGCQGSY Trigger: ATAGCTTCCTTGACACCCAAGAAGGTCAATTAGACTGCGGTTGCATGGATGCCATCTGGATTTTCCAGAAGGATCCAGAGAAAACGTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000503593.1 ENST00000652711.1 |
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| CDS CCA 90 bp | TGGTATCCAGCTACGTTTTCTCTGGATCCTTCTGGAAAATCCAGATaGCATCCATGCAACCGCAGTCTAATTGACCTTCTTGGGTGTCAA | + |
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Preference number: 5 (lower is better) Translates to: WYPATFSLDPSGKSR*HPCNRSLIDLLGCQ Trigger: TTGACACCCAAGAAGGTCAATTAGACTGCGGTTGCATGGATGCCATCTGGATTTTCCAGAAGGATCCAGAGAAAACGTAGCTGGATACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000503593.1 ENST00000652711.1 |
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| CDS CCA 90 bp | TTTAGGCTCATATATCCATTCTTGCCAGAGCCGCTAAGTCAGAGCTaGGGTGGAGAACAACTGGCCAAAGTCCATTACATTCCATCTAAT | + |
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Preference number: 5 (lower is better) Translates to: FRLIYPFLPEPLSQS*GGEQLAKVHYIPSN Trigger: ATTAGATGGAATGTAATGGACTTTGGCCAGTTGTTCTCCACCCCAGCTCTGACTTAGCGGCTCTGGCAAGAATGGATATATGAGCCTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505848.1 |
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| CDS CCA 90 bp | AATTTCCAGTGGCTTAAAATTAATGATTTAGAATCTCTCTCCAACTaGGCTTGTCAACTACTCCCGGTAGACACTTTGCTGGGCCCAGCC | + |
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Preference number: 5 (lower is better) Translates to: NFQWLKINDLESLSN*ACQLLPVDTLLGPA Trigger: GGCTGGGCCCAGCAAAGTGTCTACCGGGAGTAGTTGACAAGCCCAGTTGGAGAGAGATTCTAAATCATTAATTTTAAGCCACTGGAAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000503593.1 ENST00000652711.1 |
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| CDS CCA 90 bp | CTCACAGGAGAAGCAACTGCAACCCAATTGAAGTATTTCAACAGCTaGTTTCATCACCAACAGGAGAAAGCTGACTCTTTTGTGGAGTTC | + |
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Preference number: 5 (lower is better) Translates to: LTGEATATQLKYFNS*FHHQQEKADSFVEF Trigger: GAACTCCACAAAAGAGTCAGCTTTCTCCTGTTGGTGATGAAACCAGCTGTTGAAATACTTCAATTGGGTTGCAGTTGCTTCTCCTGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652711.1 |
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| CDS TCA 90 bp | ACCAACAGGAGAAAGCTGACTCTTTTGTGGAGTTCAGAAAGTGAGTaGAAAGGTTACATTTTCATAAAGATGTGCATAGGCAGGGCATGC | + |
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Preference number: 5 (lower is better) Translates to: TNRRKLTLLWSSESE*KGYIFIKMCIGRAC Trigger: GCATGCCCTGCCTATGCACATCTTTATGAAAATGTAACCTTTTCACTCACTTTCTGAACTCCACAAAAGAGTCAGCTTTCTCCTGTTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652711.1 |
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| CDS CCA 72 bp | CCGACCCCGAGAGCAGACCAGGGCTGCGGTCAGAGCTaGTCGCCAGATGAGGACGCCTGGGCAGCTGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: PTPRADQGCGQS*SPDEDAWAAGL Trigger: CAGGCCAGCTGCCCAGGCGTCCTCATCTGGCGACCAGCTCTGACCGCAGCCCTGGTCTGCTCTCGGGGTCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507726.5 |
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| CDS TCA 72 bp | AGCAGACCAGGGCTGCGGTCAGAGCTGGTCGCCAGATaGGGACGCCTGGGCAGCTGGCCTGTGCCTGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: SRPGLRSELVAR*GRLGSWPVPEQ Trigger: CTGCTCAGGCACAGGCCAGCTGCCCAGGCGTCCTCATCTGGCGACCAGCTCTGACCGCAGCCCTGGTCTGCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507726.5 |
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| CDS TCA 72 bp | TCTCAATCAGGGCTGCGGTCAGAGCTGGTCGCCAGATaGGGACGCCTGGGCAGCTGGCCTGTGCCTGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: SQSGLRSELVAR*GRLGSWPVPEQ Trigger: CTGCTCAGGCACAGGCCAGCTGCCCAGGCGTCCTCATCTGGCGACCAGCTCTGACCGCAGCCCTGATTGAGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652178.1 |
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| CDS CCA 72 bp | GCTAGTACAGCTCTCAATCAGGGCTGCGGTCAGAGCTaGTCGCCAGATGAGGACGCCTGGGCAGCTGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: ASTALNQGCGQS*SPDEDAWAAGL Trigger: CAGGCCAGCTGCCCAGGCGTCCTCATCTGGCGACCAGCTCTGACCGCAGCCCTGATTGAGAGCTGTACTAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652178.1 |
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| CDS GCA 72 bp | GAAGCTGCTGGCCACTGGGTGCTGGTGACTGCTACTTaGTGCAGGAACCTGGCAGTGGAGAAGCCCCACACG | + |
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Preference number: 6 (lower is better) Translates to: EAAGHWVLVTAT*CRNLAVEKPHT Trigger: CGTGTGGGGCTTCTCCACTGCCAGGTTCCTGCAGCAAGTAGCAGTCACCAGCACCCAGTGGCCAGCAGCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000503593.1 ENST00000652711.1 |
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| CDS GCA 72 bp | GGTGGAGGAAGCTGCTGGCCACTGGGTGCTGGTGACTaGTACTTGCTGCAGGAACCTGGCAGTGGAGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: GGGSCWPLGAGD*YLLQEPGSGEA Trigger: GGCTTCTCCACTGCCAGGTTCCTGCAGCAAGTAGCAGTCACCAGCACCCAGTGGCCAGCAGCTTCCTCCACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000503593.1 ENST00000652711.1 |
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| CDS CAA 72 bp | GGAAGCTGCTGGCCACTGGGTGCTGGTGACTGCTACTaGCTGCAGGAACCTGGCAGTGGAGAAGCCCCACAC | + |
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Preference number: 6 (lower is better) Translates to: GSCWPLGAGDCY*LQEPGSGEAPH Trigger: GTGTGGGGCTTCTCCACTGCCAGGTTCCTGCAGCAAGTAGCAGTCACCAGCACCCAGTGGCCAGCAGCTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000503593.1 ENST00000652711.1 |
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| CDS GCA 72 bp | TCTGCATGCCAGGCTAGTACAGCTCTCAATCAGGGCTaGGGTCAGAGCTGGTCGCCAGATGAGGACGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: SACQASTALNQG*GQSWSPDEDAW Trigger: CCAGGCGTCCTCATCTGGCGACCAGCTCTGACCGCAGCCCTGATTGAGAGCTGTACTAGCCTGGCATGCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652178.1 |
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| CDS CAA 90 bp | GGAGGCAGAGAAGAAGAAATGGAGCCTCGCACCGCTGCTCCTAGCTaGCCCAGAGGGAGAAGGGTGATGGGGCTGTTCCTATGCACTCAG | + |
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Preference number: 6 (lower is better) Translates to: GGREEEMEPRTAAPS*PRGRRVMGLFLCTQ Trigger: CTGAGTGCATAGGAACAGCCCCATCACCCTTCTCCCTCTGGGCAAGCTAGGAGCAGCGGTGCGAGGCTCCATTTCTTCTTCTCTGCCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000507726.5 ENST00000652178.1 |
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| CDS CCA 72 bp | GTGACTGAGAAGTCCCACCACAGTCCATCTGCAAGCTaGAGACCCTGGGACGCAGGTAGTGTGGCTTCACAG | + |
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Preference number: 6 (lower is better) Translates to: VTEKSHHSPSAS*RPWDAGSVASQ Trigger: CTGTGAAGCCACACTACCTGCGTCCCAGGGTCTCCAGCTTGCAGATGGACTGTGGTGGGACTTCTCAGTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000507726.5 ENST00000512063.5 |
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| CDS TCA 72 bp | TCCGTAGTGATGGTGGAAAGCAGTGGTGGACTATCGTaGGCTCTGGAGCCAGCCTGCCTGGTTTTGCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: SVVMVESSGGLS*ALEPACLVLLL Trigger: CAAGAGCAAAACCAGGCAGGCTGGCTCCAGAGCTCACGATAGTCCACCACTGCTTTCCACCATCACTACGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000507726.5 ENST00000512063.5 ENST00000652178.1 |
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| CDS GCA 72 bp | TGCTGTCTGCATGCCAGGCTAGTACAGCTCTCAATCTaGAGCAGGACTGGCCACCTACGTTGTGGGGTATCT | + |
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Preference number: 6 (lower is better) Translates to: CCLHARLVQLSI*SRTGHLRCGVS Trigger: AGATACCCCACAACGTAGGTGGCCAGTCCTGCTGCAGATTGAGAGCTGTACTAGCCTGGCATGCAGACAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652711.1 |
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| CDS CCA 72 bp | TCTGCATGCCAGGCTAGTACAGCTCTCAATCTTGGATaGGGGTATCCTAACCCAGCGGTGGCCTTAGTCACG | + |
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Preference number: 6 (lower is better) Translates to: SACQASTALNLG*GYPNPAVALVT Trigger: CGTGACTAAGGCCACCGCTGGGTTAGGATACCCCCATCCAAGATTGAGAGCTGTACTAGCCTGGCATGCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513023.1 |
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| CDS GCA 72 bp | TTCAAAGACCTCAGAATCAAGGGAGCGTATCTGCCCTaGAGCAGGACTGGCCACCTACGTTGTGGGGTATCT | + |
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Preference number: 6 (lower is better) Translates to: FKDLRIKGAYLP*SRTGHLRCGVS Trigger: AGATACCCCACAACGTAGGTGGCCAGTCCTGCTGCAGGGCAGATACGCTCCCTTGATTCTGAGGTCTTTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000512063.5 |
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| CDS CCA 72 bp | ATCCACAGCACAATTGGTGACTTCACAAAGGTCCCATaGCTCCTAGGTGGGAAGCCGCCAGAAGGCAGATCT | + |
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Preference number: 6 (lower is better) Translates to: IHSTIGDFTKVP*LLGGKPPEGRS Trigger: AGATCTGCCTTCTGGCGGCTTCCCACCTAGGAGCCATGGGACCTTTGTGAAGTCACCAATTGTGCTGTGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000505848.1 ENST00000507726.5 ENST00000512063.5 ENST00000513023.1 ENST00000515703.1 ENST00000652178.1 ENST00000652711.1 |
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| CDS CCA 72 bp | GGAGAAGAGTGTCCTGCCTTCTTCGTGTGTGTGTCTTaGCCTCTCCAGCCTGCTGACTCTCTGAATGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: GEECPAFFVCVS*PLQPADSLNAL Trigger: CAAAGCATTCAGAGAGTCAGCAGGCTGGAGAGGCCAAGACACACACACGAAGAAGGCAGGACACTCTTCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000507726.5 ENST00000512063.5 |
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| CDS CAA 72 bp | TCCAACTGGGCTTGTCAACTACTCCCGGTAGACACTTaGCTGGGCCCAGCCCCTAAGGCATTTCTTCTTAGC | + |
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Preference number: 6 (lower is better) Translates to: SNWACQLLPVDT*LGPAPKAFLLS Trigger: GCTAAGAAGAAATGCCTTAGGGGCTGGGCCCAGCAAAGTGTCTACCGGGAGTAGTTGACAAGCCCAGTTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000503593.1 ENST00000652711.1 |
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| CDS CAA 90 bp | AAGACATCCACCCTCTGTCTCCACCACCATTGCAGCTCATCCTGCTaGGCTCTCTCCTTGATAATCCCAGGGTTTGCTTCCAAATGGGGC | + |
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Preference number: 6 (lower is better) Translates to: KTSTLCLHHHCSSSC*ALSLIIPGFASKWG Trigger: GCCCCATTTGGAAGCAAACCCTGGGATTATCAAGGAGAGAGCCAAGCAGGATGAGCTGCAATGGTGGTGGAGACAGAGGGTGGATGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652711.1 |
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| CDS CCA 72 bp | CATCTGCAAGCTGGAGACCCTGGGACGCAGGTAGTGTaGCTTCACAGCAAGTTCAAAGACCTCAGAATCAAG | + |
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Preference number: 6 (lower is better) Translates to: HLQAGDPGTQVV*LHSKFKDLRIK Trigger: CTTGATTCTGAGGTCTTTGAACTTGCTGTGAAGCCACACTACCTGCGTCCCAGGGTCTCCAGCTTGCAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000507726.5 ENST00000512063.5 |
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| CDS CCA 72 bp | CAAGTTCCAGCACGTAGATCCATGGTCATGATCGGGTaGCCCAAAACTGCCTGCCTTAATGAAGATGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: QVPARRSMVMIG*PKTACLNEDAP Trigger: GGGAGCATCTTCATTAAGGCAGGCAGTTTTGGGCCACCCGATCATGACCATGGATCTACGTGCTGGAACTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652711.1 |
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| CDS CAA 72 bp | TGCTGTCTGCATGCCAGGCTAGTACAGCTCTCAATCTaGGTGACTGAGAAGTCCCACCACAGTCCATCTGCA | + |
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Preference number: 6 (lower is better) Translates to: CCLHARLVQLSI*VTEKSHHSPSA Trigger: TGCAGATGGACTGTGGTGGGACTTCTCAGTCACCAAGATTGAGAGCTGTACTAGCCTGGCATGCAGACAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000507726.5 ENST00000512063.5 |
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| CDS CAA 90 bp | GAATCTCTCTCCAACTGGGCTTGTCAACTACTCCCGGTAGACACTTaGCTGGGCCCAGCCCCTAAGGCATTTCTTCTTAGCAGGATGTCT | + |
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Preference number: 6 (lower is better) Translates to: ESLSNWACQLLPVDT*LGPAPKAFLLSRMS Trigger: AGACATCCTGCTAAGAAGAAATGCCTTAGGGGCTGGGCCCAGCAAAGTGTCTACCGGGAGTAGTTGACAAGCCCAGTTGGAGAGAGATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000503593.1 ENST00000652711.1 |
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| CDS CAA 90 bp | CCTTCTTGGGTGTCAAGGAAGCTATTCACAGGGTGGTGCCATGTTTaGGAATTTACTCCAGTGTCAAGCAGGAGGTGGTGGAGGAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: PSWVSRKLFTGWCHV*EFTPVSSRRWWRKL Trigger: CAGCTTCCTCCACCACCTCCTGCTTGACACTGGAGTAAATTCCAAAACATGGCACCACCCTGTGAATAGCTTCCTTGACACCCAAGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000503593.1 ENST00000652711.1 |
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| CDS GCA 72 bp | AGATCCATGGTCATGATCGGGTGGCCCAAAACTGCCTaGCTTAATGAAGATGCTCCCGGGCCTGTTTTTATC | + |
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Preference number: 6 (lower is better) Translates to: RSMVMIGWPKTA*LNEDAPGPVFI Trigger: GATAAAAACAGGCCCGGGAGCATCTTCATTAAGGCAGGCAGTTTTGGGCCACCCGATCATGACCATGGATCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000652711.1 |
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| CDS CCA 72 bp | CCTTTGTCTGCCTTCCAGGCCCTGGTTGCTAAATCCTaGGAAGTAAGGCAGTCCTGTTCTCCTTCACAAATG | + |
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Preference number: 6 (lower is better) Translates to: PLSAFQALVAKS*EVRQSCSPSQM Trigger: CATTTGTGAAGGAGAACAGGACTGCCTTACTTCCCAGGATTTAGCAACCAGGGCCTGGAAGGCAGACAAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652711.1 |
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| CDS TCA 72 bp | GGGAGTCAGCTTGCTTCAGTGAATAAGAGCAACATTTaGGGAGATGACAGGGCACTGCCTTCTTCGTGTGTG | + |
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Preference number: 6 (lower is better) Translates to: GSQLASVNKSNI*GDDRALPSSCV Trigger: CACACACGAAGAAGGCAGTGCCCTGTCATCTCCTCAAATGTTGCTCTTATTCACTGAAGCAAGCTGACTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000652178.1 ENST00000652711.1 |
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| CDS TCA 72 bp | TGTGTGTGTCTTGGCCTCTCCAGCCTGCTGACTCTCTaGATGCTTTGCGTTCAGTCTCTCAAAAAGAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: CVCLGLSSLLTL*MLCVQSLKKSF Trigger: GAAACTCTTTTTGAGAGACTGAACGCAAAGCATTCAGAGAGTCAGCAGGCTGGAGAGGCCAAGACACACACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000507726.5 ENST00000512063.5 ENST00000652178.1 ENST00000652711.1 |
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| CDS TCA 72 bp | CATACTTTCAAGTTCCAGCACGTAGATCCATGGTCATaGTCGGGTGGCCCAAAACTGCCTGCCTTAATGAAG | + |
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Preference number: 6 (lower is better) Translates to: HTFKFQHVDPWS*SGGPKLPALMK Trigger: CTTCATTAAGGCAGGCAGTTTTGGGCCACCCGATCATGACCATGGATCTACGTGCTGGAACTTGAAAGTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000652711.1 |
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| CDS GCA 72 bp | CCTTCTTGGGTGTCAAGGAAGCTATTCACAGGGTGGTaGCATGTTTTGGAATTTACTCCAGTGTCAAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: PSWVSRKLFTGW*HVLEFTPVSSR Trigger: CCTGCTTGACACTGGAGTAAATTCCAAAACATGGCACCACCCTGTGAATAGCTTCCTTGACACCCAAGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000503593.1 ENST00000652711.1 |
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| CDS GCA 72 bp | AGAGGAAGATCAAGAAGGGTTTTCCCAAGTTACGGTTaGAACGCAAGAAAGGGAAAGGTGAGAAGAGGGACC | + |
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Preference number: 6 (lower is better) Translates to: RGRSRRVFPSYG*NARKGKVRRGT Trigger: GGTCCCTCTTCTCACCTTTCCCTTTCTTGCGTTGCAACCGTAACTTGGGAAAACCCTTCTTGATCTTCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507726.5 |
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| CDS CCA 72 bp | CATTACATTCCATCTAATGATAGGTCTGTTGGCAGGTaGGGGGAGGCTATCAGCAACTCACCTTGTCCAGTA | + |
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Preference number: 6 (lower is better) Translates to: HYIPSNDRSVGR*GEAISNSPCPV Trigger: TACTGGACAAGGTGAGTTGCTGATAGCCTCCCCCCACCTGCCAACAGACCTATCATTAGATGGAATGTAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505848.1 |
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| CDS CCA 72 bp | CAGAATCAAGGGAGCGTATCTGCCCTGCAGCAGGACTaGCCACCTACGTTGTGGGGTATCTTTAAAATAAAA | + |
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Preference number: 6 (lower is better) Translates to: QNQGSVSALQQD*PPTLWGIFKIK Trigger: TTTTATTTTAAAGATACCCCACAACGTAGGTGGCCAGTCCTGCTGCAGGGCAGATACGCTCCCTTGATTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000512063.5 |
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| CDS CAA 72 bp | GAGAGGAAGATCAAGAAGGGTTTTCCCAAGTTACGGTaGCAACGCAAGAAAGGGAAAGGTGAGAAGAGGGAC | + |
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Preference number: 6 (lower is better) Translates to: ERKIKKGFPKLR*QRKKGKGEKRD Trigger: GTCCCTCTTCTCACCTTTCCCTTTCTTGCGTTGCAACCGTAACTTGGGAAAACCCTTCTTGATCTTCCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000507726.5 |
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| CDS CAA 90 bp | GTGTGTGTGTCTTGGCCTCTCCAGCCTGCTGACTCTCTGAATGCTTaGCGTTCAGTCTCTCAAAAAGAGTTTCTGATTGGACTCTTCACT | + |
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Preference number: 6 (lower is better) Translates to: VCVSWPLQPADSLNA*RSVSQKEFLIGLFT Trigger: AGTGAAGAGTCCAATCAGAAACTCTTTTTGAGAGACTGAACGCAAAGCATTCAGAGAGTCAGCAGGCTGGAGAGGCCAAGACACACACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000507726.5 ENST00000512063.5 ENST00000652178.1 ENST00000652711.1 |
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| CDS CAA 90 bp | ATCTGCCCTAAGGATGAGATCGGGAAAAAGCCTGCAAGCATGTGTTaGAAAGGAGGTGAGAGAGGAAGATCAAGAAGGGTTTTCCCAAGT | + |
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Preference number: 6 (lower is better) Translates to: ICPKDEIGKKPASMC*KGGERGRSRRVFPS Trigger: ACTTGGGAAAACCCTTCTTGATCTTCCTCTCTCACCTCCTTTCAAACACATGCTTGCAGGCTTTTTCCCGATCTCATCCTTAGGGCAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000507726.5 |
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| CDS CAA 90 bp | GAAGAGATGGCCATGCAGCTCACAGGAGAAGCAACTGCAACCCAATaGAAGTATTTCAACAGCTGGTTTCATCACCAACAGGAGAAAGCT | + |
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Preference number: 6 (lower is better) Translates to: EEMAMQLTGEATATQ*KYFNSWFHHQQEKA Trigger: AGCTTTCTCCTGTTGGTGATGAAACCAGCTGTTGAAATACTTCAATTGGGTTGCAGTTGCTTCTCCTGTGAGCTGCATGGCCATCTCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652711.1 |
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| CDS TCA 72 bp | CCATGCAGCTCACAGGAGAAGCAACTGCAACCCAATTaGAGTATTTCAACAGCTGGTTTCATCACCAACAGG | + |
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Preference number: 6 (lower is better) Translates to: PCSSQEKQLQPN*SISTAGFITNR Trigger: CCTGTTGGTGATGAAACCAGCTGTTGAAATACTTCAATTGGGTTGCAGTTGCTTCTCCTGTGAGCTGCATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000652711.1 |
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| CDS GCA 72 bp | TCTCTGGATCCTTCTGGAAAATCCAGATGGCATCCATaGAACCGCAGTCTAATTGACCTTCTTGGGTGTCAA | + |
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Preference number: 6 (lower is better) Translates to: SLDPSGKSRWHP*NRSLIDLLGCQ Trigger: TTGACACCCAAGAAGGTCAATTAGACTGCGGTTGCATGGATGCCATCTGGATTTTCCAGAAGGATCCAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000503593.1 ENST00000652711.1 |
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| CDS CCA 72 bp | ATATATCCATTCTTGCCAGAGCCGCTAAGTCAGAGCTaGGGTGGAGAACAACTGGCCAAAGTCCATTACATT | + |
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Preference number: 6 (lower is better) Translates to: IYPFLPEPLSQS*GGEQLAKVHYI Trigger: AATGTAATGGACTTTGGCCAGTTGTTCTCCACCCCAGCTCTGACTTAGCGGCTCTGGCAAGAATGGATATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505848.1 |
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| CDS CCA 72 bp | CTTAGCAGGATGTCTGGTATCCAGCTACGTTTTCTCTaGATCCTTCTGGAAAATCCAGATGGCATCCATGCA | + |
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Preference number: 6 (lower is better) Translates to: LSRMSGIQLRFL*ILLENPDGIHA Trigger: TGCATGGATGCCATCTGGATTTTCCAGAAGGATCCAGAGAAAACGTAGCTGGATACCAGACATCCTGCTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000503593.1 ENST00000652711.1 |
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| CDS CCA 72 bp | TGCCAGGCTAGTACAGCTCTCAATCTGCAGCAGGACTaGCCACCTACGTTGTGGGGTATCTTTAAAATAAAA | + |
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Preference number: 6 (lower is better) Translates to: CQASTALNLQQD*PPTLWGIFKIK Trigger: TTTTATTTTAAAGATACCCCACAACGTAGGTGGCCAGTCCTGCTGCAGATTGAGAGCTGTACTAGCCTGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000652711.1 |
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| CDS CAA 72 bp | TCTTGGCCTCTCCAGCCTGCTGACTCTCTGAATGCTTaGCGTTCAGTCTCTCAAAAAGAGTTTCTGATTGGA | + |
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Preference number: 6 (lower is better) Translates to: SWPLQPADSLNA*RSVSQKEFLIG Trigger: TCCAATCAGAAACTCTTTTTGAGAGACTGAACGCAAAGCATTCAGAGAGTCAGCAGGCTGGAGAGGCCAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000507726.5 ENST00000512063.5 ENST00000652178.1 ENST00000652711.1 |
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| CDS TCA 72 bp | GTATGTACATGGTATTGGGGAGTCAGCTTGCTTCAGTaGATAAGAGCAACATTTGAGGAGATGACAGGGCAC | + |
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Preference number: 6 (lower is better) Translates to: VCTWYWGVSLLQ*IRATFEEMTGH Trigger: GTGCCCTGTCATCTCCTCAAATGTTGCTCTTATTCACTGAAGCAAGCTGACTCCCCAATACCATGTACATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000652178.1 ENST00000652711.1 |
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| CDS CCA 72 bp | GCTACGTTTTCTCTGGATCCTTCTGGAAAATCCAGATaGCATCCATGCAACCGCAGTCTAATTGACCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: ATFSLDPSGKSR*HPCNRSLIDLL Trigger: AAGAAGGTCAATTAGACTGCGGTTGCATGGATGCCATCTGGATTTTCCAGAAGGATCCAGAGAAAACGTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000503593.1 ENST00000652711.1 |
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| CDS CAA 72 bp | TTTCTCCCCTCTTCTGGGTTCAGTATGTACATGGTATaGGGGAGTCAGCTTGCTTCAGTGAATAAGAGCAAC | + |
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Preference number: 6 (lower is better) Translates to: FLPSSGFSMYMV*GSQLASVNKSN Trigger: GTTGCTCTTATTCACTGAAGCAAGCTGACTCCCCAATACCATGTACATACTGAACCCAGAAGAGGGGAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000652178.1 ENST00000652711.1 |
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| CDS TCA 72 bp | GTAATTTCACAAGGCAGTCCTGTTCTCCTTCACAAATaGAGCATCCACAGCACAATTGGTGACTTCACAAAG | + |
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Preference number: 6 (lower is better) Translates to: VISQGSPVLLHK*SIHSTIGDFTK Trigger: CTTTGTGAAGTCACCAATTGTGCTGTGGATGCTTCATTTGTGAAGGAGAACAGGACTGCCTTGTGAAATTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000505848.1 ENST00000507726.5 ENST00000512063.5 ENST00000513023.1 ENST00000515703.1 ENST00000652178.1 |
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| CDS CAA 72 bp | CAATGTAGTCATCTCTGGGACAGGGTCCCTATCTTATaGTGTTGTTCTTGTCCAGTACCCTCCTGTTATAAT | + |
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Preference number: 6 (lower is better) Translates to: QCSHLWDRVPIL*CCSCPVPSCYN Trigger: ATTATAACAGGAGGGTACTGGACAAGAACAACACAATAAGATAGGGACCCTGTCCCAGAGATGACTACATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515703.1 |
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| CDS CAA 90 bp | TCTGAACTTCAATGTAGTCATCTCTGGGACAGGGTCCCTATCTTATaGTGTTGTTCTTGTCCAGTACCCTCCTGTTATAATACAAAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SELQCSHLWDRVPIL*CCSCPVPSCYNTKL Trigger: GAGCTTTGTATTATAACAGGAGGGTACTGGACAAGAACAACACAATAAGATAGGGACCCTGTCCCAGAGATGACTACATTGAAGTTCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515703.1 |
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| CDS CCA 72 bp | TGGCTTAAAATTAATGATTTAGAATCTCTCTCCAACTaGGCTTGTCAACTACTCCCGGTAGACACTTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: WLKINDLESLSN*ACQLLPVDTLL Trigger: CAGCAAAGTGTCTACCGGGAGTAGTTGACAAGCCCAGTTGGAGAGAGATTCTAAATCATTAATTTTAAGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000503593.1 ENST00000652711.1 |
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| CDS TCA 72 bp | TACCCTCCTGTTATAATACAAAGCTCCAGCTCAAACTaGAAACTTAAAGTACAATCAGCCAGATCCACCTTC | + |
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Preference number: 6 (lower is better) Translates to: YPPVIIQSSSSN*KLKVQSARSTF Trigger: GAAGGTGGATCTGGCTGATTGTACTTTAAGTTTTCAGTTTGAGCTGGAGCTTTGTATTATAACAGGAGGGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000505848.1 ENST00000507726.5 ENST00000512063.5 ENST00000515703.1 ENST00000652178.1 |
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| CDS TCA 72 bp | AAGTTGAAATCTTGGATGATAACGTCCCTTCCAATTTaGAGATTCTATAATTTCCAACTTAGGCAACTGACA | + |
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Preference number: 6 (lower is better) Translates to: KLKSWMITSLPI*RFYNFQLRQLT Trigger: TGTCAGTTGCCTAAGTTGGAAATTATAGAATCTTCAAATTGGAAGGGACGTTATCATCCAAGATTTCAACTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000507726.5 ENST00000512063.5 ENST00000652178.1 |
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