Pregenerated sensors for LINC01094 (Homo sapiens)
Ensembl gene IDs: ENSG00000251442Ensembl transcript IDs: ENST00000503259.6, ENST00000503539.6, ENST00000504675.6, ENST00000507802.6, ENST00000512322.2, ENST00000514130.6, ENST00000652918.1, ENST00000653916.1, ENST00000654343.1, ENST00000654792.1, ENST00000656991.1, ENST00000661741.1, ENST00000663250.1, ENST00000666953.1, ENST00000667455.1, ENST00000668669.1, ENST00000670146.1, ENST00000671622.1
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GAACACACAGTGAGAACGAGAAGGGCTTTACAGCTCCGGTCAGCCTaGCTCAAACCTGTGTTAATAGCCCAGACTCTTGTTGCTCCATCC | + |
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Preference number: 5 (lower is better) Translates to: EHTVRTRRALQLRSA*LKPVLIAQTLVAPS Trigger: GGATGGAGCAACAAGAGTCTGGGCTATTAACACAGGTTTGAGTCAGGCTGACCGGAGCTGTAAAGCCCTTCTCGTTCTCACTGTGTGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000503259.6 ENST00000671622.1 |
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| CDS CCA 90 bp | ATGGCTAAAGCAGGGCTGTGGGTCTGGGATGACTGGAAGAGCAACTaGGATTATGTGCTTCCTTATCCCATTCAAGGAGCAAAAGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: MAKAGLWVWDDWKSN*DYVLPYPIQGAKGW Trigger: CCAGCCTTTTGCTCCTTGAATGGGATAAGGAAGCACATAATCCCAGTTGCTCTTCCAGTCATCCCAGACCCACAGCCCTGCTTTAGCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000503259.6 ENST00000514130.6 ENST00000666953.1 |
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| CDS TCA 90 bp | TTGCAGCTAGGAGTGGACAAGTGGTCAAGTGATGGTGCTGGCCAATaGGAGGTAAGCAAGTTTCGGAGCTGTCTGGAAAGGCTTTGCTTT | + |
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Preference number: 5 (lower is better) Translates to: LQLGVDKWSSDGAGQ*EVSKFRSCLERLCF Trigger: AAAGCAAAGCCTTTCCAGACAGCTCCGAAACTTGCTTACCTCTCATTGGCCAGCACCATCACTTGACCACTTGTCCACTCCTAGCTGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000503539.6 ENST00000504675.6 ENST00000507802.6 ENST00000512322.2 ENST00000652918.1 ENST00000653916.1 ENST00000654343.1 ENST00000654792.1 ENST00000656991.1 ENST00000661741.1 ENST00000663250.1 ENST00000667455.1 ENST00000668669.1 ENST00000670146.1 ENST00000671622.1 |
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| CDS TCA 90 bp | TACTTTGCCACTTTCCTTGCAGCTAGGAGTGGACAAGTGGTCAAGTaGTGGTGCTGGCCAATGAGAGGTAAGCAAGTTTCGGAGCTGTCT | + |
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Preference number: 5 (lower is better) Translates to: YFATFLAARSGQVVK*WCWPMRGKQVSELS Trigger: AGACAGCTCCGAAACTTGCTTACCTCTCATTGGCCAGCACCATCACTTGACCACTTGTCCACTCCTAGCTGCAAGGAAAGTGGCAAAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000503539.6 ENST00000504675.6 ENST00000507802.6 ENST00000512322.2 ENST00000652918.1 ENST00000653916.1 ENST00000654343.1 ENST00000654792.1 ENST00000656991.1 ENST00000661741.1 ENST00000663250.1 ENST00000667455.1 ENST00000668669.1 ENST00000670146.1 ENST00000671622.1 |
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| CDS TCA 90 bp | ACAGCTCTGCAGGCTTTGCAGGAAGCAATGATGCTAGCATCAGCTTaGCTTCTGGGAAGTCCTCAGGAAGCTTATGATCATGGCAGAAGG | + |
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Preference number: 5 (lower is better) Translates to: TALQALQEAMMLASA*LLGSPQEAYDHGRR Trigger: CCTTCTGCCATGATCATAAGCTTCCTGAGGACTTCCCAGAAGTCAAGCTGATGCTAGCATCATTGCTTCCTGCAAAGCCTGCAGAGCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000503259.6 ENST00000514130.6 ENST00000666953.1 |
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| CDS CCA 90 bp | TGTCCTCAGTTGCTCTCCCCTTGTGAATATATGATGGCTATAGGATaGCTAAAGCAGGGCTGTGGGTCTGGGATGACTGGAAGAGCAACT | + |
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Preference number: 5 (lower is better) Translates to: CPQLLSPCEYMMAIG*LKQGCGSGMTGRAT Trigger: AGTTGCTCTTCCAGTCATCCCAGACCCACAGCCCTGCTTTAGCCATCCTATAGCCATCATATATTCACAAGGGGAGAGCAACTGAGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000503259.6 ENST00000514130.6 ENST00000666953.1 |
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| CDS TCA 90 bp | ATGTCACAAGGATCCACAGTGTTGTCCTCAGTTGCTCTCCCCTTGTaGATATATGATGGCTATAGGATGGCTAAAGCAGGGCTGTGGGTC | + |
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Preference number: 5 (lower is better) Translates to: MSQGSTVLSSVALPL*IYDGYRMAKAGLWV Trigger: GACCCACAGCCCTGCTTTAGCCATCCTATAGCCATCATATATTCACAAGGGGAGAGCAACTGAGGACAACACTGTGGATCCTTGTGACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000503259.6 ENST00000514130.6 ENST00000666953.1 |
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| CDS TCA 90 bp | GCCACACACTTTCAAATGACCAGATGTCTAGAGAACTCACTATTGTaGAGACAGCACCAAGCCATGAGGGATCCAAACACCCTCCCACCA | + |
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Preference number: 5 (lower is better) Translates to: ATHFQMTRCLENSLL*RQHQAMRDPNTLPP Trigger: TGGTGGGAGGGTGTTTGGATCCCTCATGGCTTGGTGCTGTCTTCACAATAGTGAGTTCTCTAGACATCTGGTCATTTGAAAGTGTGTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000503259.6 ENST00000514130.6 ENST00000666953.1 |
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| CDS TCA 90 bp | GATGCTAGCATCAGCTTGACTTCTGGGAAGTCCTCAGGAAGCTTATaGTCATGGCAGAAGGCAAAAGGAAAGCAGGAAAGCAGGCATGTC | + |
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Preference number: 5 (lower is better) Translates to: DASISLTSGKSSGSL*SWQKAKGKQESRHV Trigger: GACATGCCTGCTTTCCTGCTTTCCTTTTGCCTTCTGCCATGATCATAAGCTTCCTGAGGACTTCCCAGAAGTCAAGCTGATGCTAGCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000503259.6 ENST00000514130.6 ENST00000666953.1 |
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| CDS GCA 90 bp | CAGGCATGTCACATAGTCAGAGCAGAAGCAAGGAGAGGGGGAAGGTaGCACACACTTTCAAATGACCAGATGTCTAGAGAACTCACTATT | + |
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Preference number: 5 (lower is better) Translates to: QACHIVRAEARRGGR*HTLSNDQMSRELTI Trigger: AATAGTGAGTTCTCTAGACATCTGGTCATTTGAAAGTGTGTGGCACCTTCCCCCTCTCCTTGCTTCTGCTCTGACTATGTGACATGCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000503259.6 ENST00000514130.6 ENST00000666953.1 |
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| CDS GCA 90 bp | TCAATTCCCAGAGCCACTTTCCTCCAGAATTTTAGACCATTCGGATaGCTTTCTGGAGCTGGCATCAATCTTTCCCAGGCACATGACTGT | + |
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Preference number: 5 (lower is better) Translates to: SIPRATFLQNFRPFG*LSGAGINLSQAHDC Trigger: ACAGTCATGTGCCTGGGAAAGATTGATGCCAGCTCCAGAAAGGCATCCGAATGGTCTAAAATTCTGGAGGAAAGTGGCTCTGGGAATTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000653916.1 |
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| CDS CCA 90 bp | CAGCAGCTTGTTTGTCTGTTCCCACGTTTTACGTGTTCCTTAGGCTaGCACCTTTATGGTCCCTCTGGAAAGAGAAGACAGTCAACTGAT | + |
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Preference number: 5 (lower is better) Translates to: QQLVCLFPRFTCSLG*HLYGPSGKRRQSTD Trigger: ATCAGTTGACTGTCTTCTCTTTCCAGAGGGACCATAAAGGTGCCAGCCTAAGGAACACGTAAAACGTGGGAACAGACAAACAAGCTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000503539.6 ENST00000504675.6 ENST00000507802.6 ENST00000512322.2 ENST00000652918.1 ENST00000656991.1 ENST00000667455.1 ENST00000668669.1 ENST00000671622.1 |
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| CDS GCA 90 bp | GAAGAGTTCAAAGGGCCCCCATCAATCTCACCTATCCTGATAATATaGGTCAAAGTTGCAGCTGGCAAGTGGTTACCATTGGGAAATGAC | + |
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Preference number: 5 (lower is better) Translates to: EEFKGPPSISPILII*VKVAAGKWLPLGND Trigger: GTCATTTCCCAATGGTAACCACTTGCCAGCTGCAACTTTGACGCATATTATCAGGATAGGTGAGATTGATGGGGGCCCTTTGAACTCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 13 transcripts: ENST00000503539.6 ENST00000504675.6 ENST00000507802.6 ENST00000512322.2 ENST00000652918.1 ENST00000654343.1 ENST00000654792.1 ENST00000656991.1 ENST00000663250.1 ENST00000667455.1 ENST00000668669.1 ENST00000670146.1 ENST00000671622.1 |
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| CDS GCA 90 bp | ATCCTTTTCACCTGGGAGAAACCATGTTCAAAACATGTGGACCACTaGCCTCAACGACGTGTCACTGAGAATAATTCCACAGGCCTTAGT | + |
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Preference number: 5 (lower is better) Translates to: ILFTWEKPCSKHVDH*PQRRVTENNSTGLS Trigger: ACTAAGGCCTGTGGAATTATTCTCAGTGACACGTCGTTGAGGGCAGTGGTCCACATGTTTTGAACATGGTTTCTCCCAGGTGAAAAGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000671622.1 |
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| CDS CCA 90 bp | GCTGGATTCCTGTGGATCTCCATTTCTGAATCTATTACTGACAGATaGATGGCATTACTTAGACCATTCGGATGCCTTTCTGGAGCTGGC | + |
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Preference number: 5 (lower is better) Translates to: AGFLWISISESITDR*MALLRPFGCLSGAG Trigger: GCCAGCTCCAGAAAGGCATCCGAATGGTCTAAGTAATGCCATCCATCTGTCAGTAATAGATTCAGAAATGGAGATCCACAGGAATCCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666953.1 |
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| CDS TCA 90 bp | GAGGTAAGCAAGTTTCGGAGCTGTCTGGAAAGGCTTTGCTTTTCCTaGCAAAATGAATGTAACATCCCAGTGCTCCCTCTTCCTTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: EVSKFRSCLERLCFS*QNECNIPVLPLPFF Trigger: GAAGAAAGGAAGAGGGAGCACTGGGATGTTACATTCATTTTGTCAGGAAAAGCAAAGCCTTTCCAGACAGCTCCGAAACTTGCTTACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 15 transcripts: ENST00000503539.6 ENST00000504675.6 ENST00000507802.6 ENST00000512322.2 ENST00000652918.1 ENST00000653916.1 ENST00000654343.1 ENST00000654792.1 ENST00000656991.1 ENST00000661741.1 ENST00000663250.1 ENST00000667455.1 ENST00000668669.1 ENST00000670146.1 ENST00000671622.1 |
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| CDS TCA 90 bp | ATCCCATTCAAGGAGCAAAAGGCTGGATTCCTGTGGATCTCTGAATaGCAAGGGATAATTTTCCAGAATACCCAGCACTCTTCTGCATAC | + |
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Preference number: 5 (lower is better) Translates to: IPFKEQKAGFLWISE*QGIIFQNTQHSSAY Trigger: GTATGCAGAAGAGTGCTGGGTATTCTGGAAAATTATCCCTTGTCATTCAGAGATCCACAGGAATCCAGCCTTTTGCTCCTTGAATGGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000503259.6 ENST00000514130.6 |
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| CDS GCA 90 bp | ACTCTGACTTCATGTTGTTACTCAGCATTTTGTTCCTTATTGAAATaGCTGGCTCTGCACAACTGGTTTGTAAAGTCTGAAGATCCCCTG | + |
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Preference number: 5 (lower is better) Translates to: TLTSCCYSAFCSLLK*LALHNWFVKSEDPL Trigger: CAGGGGATCTTCAGACTTTACAAACCAGTTGTGCAGAGCCAGGCATTTCAATAAGGAACAAAATGCTGAGTAACAACATGAAGTCAGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000503259.6 ENST00000504675.6 ENST00000507802.6 ENST00000656991.1 ENST00000663250.1 ENST00000668669.1 ENST00000671622.1 |
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| CDS TCA 90 bp | AAGAGGAAAAGGAGAGATAAGAGCAAAACTAAGAGACGTGCAAGATaGGGATTGGCAGATAGAATAACTTTCAGCTTTCAGCTGCCAGTA | + |
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Preference number: 5 (lower is better) Translates to: KRKRRDKSKTKRRAR*GLADRITFSFQLPV Trigger: TACTGGCAGCTGAAAGCTGAAAGTTATTCTATCTGCCAATCCTCATCTTGCACGTCTCTTAGTTTTGCTCTTATCTCTCCTTTTCCTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000503259.6 ENST00000514130.6 ENST00000666953.1 |
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| CDS CCA 90 bp | GTAAGCTCAACTACAATGGCTCAAACAATAAATAAATGTATTGATTaGTTCACTGGCTTGGTTATGTCACAAGGATCCACAGTGTTGTCC | + |
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Preference number: 5 (lower is better) Translates to: VSSTTMAQTINKCID*FTGLVMSQGSTVLS Trigger: GGACAACACTGTGGATCCTTGTGACATAACCAAGCCAGTGAACCAATCAATACATTTATTTATTGTTTGAGCCATTGTAGTTGAGCTTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000503259.6 ENST00000514130.6 ENST00000666953.1 |
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| CDS TCA 90 bp | CAGATAGGCGAGAGACAAATGAATGGTTTCATTCTTTTGAGTTTCTaGTTAGCCTTTCCAAAGGAGGCAATCAGATATACATCTATCTCA | + |
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Preference number: 5 (lower is better) Translates to: QIGERQMNGFILLSF*LAFPKEAIRYTSIS Trigger: TGAGATAGATGTATATCTGATTGCCTCCTTTGGAAAGGCTAATCAGAAACTCAAAAGAATGAAACCATTCATTTGTCTCTCGCCTATCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000503259.6 ENST00000514130.6 ENST00000666953.1 |
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| CDS TCA 90 bp | GGAAAATTGTATTGTATGTTGGCTCAGGTATGGATCCAAATTTTGTaGGGCTTGAAGTTTATGCAATTGGAGGAGGCTTCTTTAAGAAAA | + |
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Preference number: 5 (lower is better) Translates to: GKLYCMLAQVWIQIL*GLKFMQLEEASLRK Trigger: TTTTCTTAAAGAAGCCTCCTCCAATTGCATAAACTTCAAGCCTCACAAAATTTGGATCCATACCTGAGCCAACATACAATACAATTTTCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000671622.1 |
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| CDS TCA 90 bp | CCAGACTATATCAAGTGCCTATGTGTATATTCTGTGTATACTGAGTaGGGATACTTAATGTGGGTTATGGTTTTAAAAAGCTTTGGAAAC | + |
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Preference number: 5 (lower is better) Translates to: PDYIKCLCVYSVYTE*GYLMWVMVLKSFGN Trigger: GTTTCCAAAGCTTTTTAAAACCATAACCCACATTAAGTATCCTCACTCAGTATACACAGAATATACACATAGGCACTTGATATAGTCTGG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000503259.6 ENST00000514130.6 ENST00000666953.1 |
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| CDS CAA 90 bp | TTGGGTCTGGAAAGGCGCGACAACTTGAAGCAAAGGCAGGAAGCCTaGAAGCCGAAGCAGAGAGGGGGCTTCCAGGTCACAGATAGGCGA | + |
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Preference number: 6 (lower is better) Translates to: LGLERRDNLKQRQEA*KPKQRGGFQVTDRR Trigger: TCGCCTATCTGTGACCTGGAAGCCCCCTCTCTGCTTCGGCTTCAAGGCTTCCTGCCTTTGCTTCAAGTTGTCGCGCCTTTCCAGACCCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000503259.6 ENST00000514130.6 ENST00000666953.1 |
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| CDS CAA 72 bp | TCACTGCTGGCCCTGAGTCAGGCTCGCAGAGCATCATaGCTGCTGTTTCCTCTGCCAGCACCATTTCTGAAT | + |
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Preference number: 6 (lower is better) Translates to: SLLALSQARRAS*LLFPLPAPFLN Trigger: ATTCAGAAATGGTGCTGGCAGAGGAAACAGCAGCAATGATGCTCTGCGAGCCTGACTCAGGGCCAGCAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000504675.6 ENST00000652918.1 |
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| CDS CAA 72 bp | TCACTGCTGGCCCTGAGTCAGGCTCGCAGAGCATCATaGCTGCTGTTTCCTCTGCCAGCACTGTATCTTTGT | + |
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Preference number: 6 (lower is better) Translates to: SLLALSQARRAS*LLFPLPALYLC Trigger: ACAAAGATACAGTGCTGGCAGAGGAAACAGCAGCAATGATGCTCTGCGAGCCTGACTCAGGGCCAGCAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000507802.6 |
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| CDS CCA 72 bp | GCAGGGCTGTGGGTCTGGGATGACTGGAAGAGCAACTaGGATTATGTGCTTCCTTATCCCATTCAAGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: AGLWVWDDWKSN*DYVLPYPIQGA Trigger: TGCTCCTTGAATGGGATAAGGAAGCACATAATCCCAGTTGCTCTTCCAGTCATCCCAGACCCACAGCCCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000503259.6 ENST00000514130.6 ENST00000666953.1 |
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| CDS CCA 72 bp | GATGGCTATAGGATGGCTAAAGCAGGGCTGTGGGTCTaGGATGACTGGAAGAGCAACTGGGATTATGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: DGYRMAKAGLWV*DDWKSNWDYVL Trigger: AAGCACATAATCCCAGTTGCTCTTCCAGTCATCCCAGACCCACAGCCCTGCTTTAGCCATCCTATAGCCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000503259.6 ENST00000514130.6 ENST00000666953.1 |
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| CDS CCA 72 bp | TTGCTCTCCCCTTGTGAATATATGATGGCTATAGGATaGCTAAAGCAGGGCTGTGGGTCTGGGATGACTGGA | + |
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Preference number: 6 (lower is better) Translates to: LLSPCEYMMAIG*LKQGCGSGMTG Trigger: TCCAGTCATCCCAGACCCACAGCCCTGCTTTAGCCATCCTATAGCCATCATATATTCACAAGGGGAGAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000503259.6 ENST00000514130.6 ENST00000666953.1 |
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| CDS TCA 72 bp | CCACCCAGGCCTCCCAGCTCTTGGCAAGCAACACTCTaGCTTCATGTTGTTACTCAGCATTTTGTTCCTTAT | + |
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Preference number: 6 (lower is better) Translates to: PPRPPSSWQATL*LHVVTQHFVPY Trigger: ATAAGGAACAAAATGCTGAGTAACAACATGAAGTCAGAGTGTTGCTTGCCAAGAGCTGGGAGGCCTGGGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000503259.6 ENST00000504675.6 ENST00000507802.6 ENST00000656991.1 ENST00000663250.1 ENST00000668669.1 ENST00000671622.1 |
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| CDS GCA 72 bp | ACTGACAGATGGATGGCATTACTTAGACCATTCGGATaGCTTTCTGGAGCTGGCATCAATCTTTCCCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: TDRWMALLRPFG*LSGAGINLSQA Trigger: TGCCTGGGAAAGATTGATGCCAGCTCCAGAAAGGCATCCGAATGGTCTAAGTAATGCCATCCATCTGTCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 11 transcripts: ENST00000503259.6 ENST00000503539.6 ENST00000504675.6 ENST00000514130.6 ENST00000652918.1 ENST00000654343.1 ENST00000656991.1 ENST00000661741.1 ENST00000666953.1 ENST00000667455.1 ENST00000670146.1 |
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| CDS GCA 72 bp | CACATAGTCAGAGCAGAAGCAAGGAGAGGGGGAAGGTaGCACACACTTTCAAATGACCAGATGTCTAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: HIVRAEARRGGR*HTLSNDQMSRE Trigger: TTCTCTAGACATCTGGTCATTTGAAAGTGTGTGGCACCTTCCCCCTCTCCTTGCTTCTGCTCTGACTATGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000503259.6 ENST00000514130.6 ENST00000666953.1 |
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| CDS CCA 72 bp | GTTTGTCTGTTCCCACGTTTTACGTGTTCCTTAGGCTaGCACCTTTATGGTCCCTCTGGAAAGAGAAGACAG | + |
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Preference number: 6 (lower is better) Translates to: VCLFPRFTCSLG*HLYGPSGKRRQ Trigger: CTGTCTTCTCTTTCCAGAGGGACCATAAAGGTGCCAGCCTAAGGAACACGTAAAACGTGGGAACAGACAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000503539.6 ENST00000504675.6 ENST00000507802.6 ENST00000512322.2 ENST00000652918.1 ENST00000656991.1 ENST00000667455.1 ENST00000668669.1 ENST00000671622.1 |
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| CDS CAA 90 bp | GCCTTTCTGGAGCTGGCATCAATCTTTCCCAGGCACATGAACTGTTaGCTGAATGGCCACGGTGTTTTGAGGTTTCTCTTTATGAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: AFLELASIFPRHMNC*LNGHGVLRFLFMKG Trigger: GCCTTTCATAAAGAGAAACCTCAAAACACCGTGGCCATTCAGCAAACAGTTCATGTGCCTGGGAAAGATTGATGCCAGCTCCAGAAAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661741.1 |
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| CDS TCA 72 bp | ATGATGCCGAGAATTGCAGCAGTCATCTTACAACCATaGAGAACAGGTAGGGAGAATTGCAGACTTGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: MMPRIAAVILQP*RTGRENCRLGG Trigger: GCCACCAAGTCTGCAATTCTCCCTACCTGTTCTTCATGGTTGTAAGATGACTGCTGCAATTCTCGGCATCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000503539.6 ENST00000504675.6 ENST00000507802.6 ENST00000512322.2 ENST00000652918.1 ENST00000653916.1 ENST00000654343.1 ENST00000654792.1 ENST00000656991.1 ENST00000661741.1 ENST00000663250.1 ENST00000667455.1 ENST00000668669.1 ENST00000670146.1 ENST00000671622.1 |
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| CDS TCA 72 bp | TTGTTATATGGAGTGGGGCACAGTGGAGAGAATTGCTaGGGGGTGAGGGATGTTGATGTCGAAAGTACAAAG | + |
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Preference number: 6 (lower is better) Translates to: LLYGVGHSGENC*GVRDVDVESTK Trigger: CTTTGTACTTTCGACATCAACATCCCTCACCCCTCAGCAATTCTCTCCACTGTGCCCCACTCCATATAACAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000503259.6 ENST00000514130.6 ENST00000666953.1 |
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| CDS TCA 72 bp | ATCAGCTTGACTTCTGGGAAGTCCTCAGGAAGCTTATaGTCATGGCAGAAGGCAAAAGGAAAGCAGGAAAGC | + |
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Preference number: 6 (lower is better) Translates to: ISLTSGKSSGSL*SWQKAKGKQES Trigger: GCTTTCCTGCTTTCCTTTTGCCTTCTGCCATGATCATAAGCTTCCTGAGGACTTCCCAGAAGTCAAGCTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000503259.6 ENST00000514130.6 ENST00000666953.1 |
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| CDS TCA 72 bp | CAGGCTTTGCAGGAAGCAATGATGCTAGCATCAGCTTaGCTTCTGGGAAGTCCTCAGGAAGCTTATGATCAT | + |
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Preference number: 6 (lower is better) Translates to: QALQEAMMLASA*LLGSPQEAYDH Trigger: ATGATCATAAGCTTCCTGAGGACTTCCCAGAAGTCAAGCTGATGCTAGCATCATTGCTTCCTGCAAAGCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000503259.6 ENST00000514130.6 ENST00000666953.1 |
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| CDS GCA 72 bp | AAAGGGCCCCCATCAATCTCACCTATCCTGATAATATaGGTCAAAGTTGCAGCTGGCAAGTGGTTACCATTG | + |
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Preference number: 6 (lower is better) Translates to: KGPPSISPILII*VKVAAGKWLPL Trigger: CAATGGTAACCACTTGCCAGCTGCAACTTTGACGCATATTATCAGGATAGGTGAGATTGATGGGGGCCCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 13 transcripts: ENST00000503539.6 ENST00000504675.6 ENST00000507802.6 ENST00000512322.2 ENST00000652918.1 ENST00000654343.1 ENST00000654792.1 ENST00000656991.1 ENST00000663250.1 ENST00000667455.1 ENST00000668669.1 ENST00000670146.1 ENST00000671622.1 |
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| CDS CCA 72 bp | ATATATGATGGCTATAGGATGGCTAAAGCAGGGCTGTaGGTCTGGGATGACTGGAAGAGCAACTGGGATTAT | + |
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Preference number: 6 (lower is better) Translates to: IYDGYRMAKAGL*VWDDWKSNWDY Trigger: ATAATCCCAGTTGCTCTTCCAGTCATCCCAGACCCACAGCCCTGCTTTAGCCATCCTATAGCCATCATATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000503259.6 ENST00000514130.6 ENST00000666953.1 |
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| CDS CCA 72 bp | TCCTTTTCACCTGGGAGAAACCATGTTCAAAACATGTaGACCACTGCCCTCAACGACGTGTCACTGAGAATA | + |
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Preference number: 6 (lower is better) Translates to: SFSPGRNHVQNM*TTALNDVSLRI Trigger: TATTCTCAGTGACACGTCGTTGAGGGCAGTGGTCCACATGTTTTGAACATGGTTTCTCCCAGGTGAAAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000671622.1 |
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| CDS CAA 90 bp | TCACTGGCTTGGTTATGTCACAAGGATCCACAGTGTTGTCCTCAGTaGCTCTCCCCTTGTGAATATATGATGGCTATAGGATGGCTAAAG | + |
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Preference number: 6 (lower is better) Translates to: SLAWLCHKDPQCCPQ*LSPCEYMMAIGWLK Trigger: CTTTAGCCATCCTATAGCCATCATATATTCACAAGGGGAGAGCAACTGAGGACAACACTGTGGATCCTTGTGACATAACCAAGCCAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000503259.6 ENST00000514130.6 ENST00000666953.1 |
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| CDS CAA 90 bp | GAGGCAATCAGATATACATCTATCTCAGTGAGCAGAGGGATGACTTaGAATAGAATGGGAGGCAGGTTTGCTCTAAGCAGTTCCCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: EAIRYTSISVSRGMT*NRMGGRFALSSSQL Trigger: AAGCTGGGAACTGCTTAGAGCAAACCTGCCTCCCATTCTATTCAAAGTCATCCCTCTGCTCACTGAGATAGATGTATATCTGATTGCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000503259.6 ENST00000514130.6 ENST00000666953.1 |
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| CDS TCA 72 bp | CCTTTCTGGAGCTGGCATCAATCTTTCCCAGGCACATaGCTAAATCGAATCCGTGTGTATCATTTTCTGCGT | + |
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Preference number: 6 (lower is better) Translates to: PFWSWHQSFPGT*LNRIRVYHFLR Trigger: ACGCAGAAAATGATACACACGGATTCGATTTAGTCATGTGCCTGGGAAAGATTGATGCCAGCTCCAGAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000652918.1 ENST00000654343.1 ENST00000656991.1 |
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| CDS CAA 72 bp | GTGCCTAAATCGAATCCGTGTGTATCATTTTCTGCGTaGGTAAGTAGATCCACGTTTTCCTTTGGGAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: VPKSNPCVSFSA*VSRSTFSFGRL Trigger: GAGCCTCCCAAAGGAAAACGTGGATCTACTTACCAACGCAGAAAATGATACACACGGATTCGATTTAGGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000503259.6 ENST00000503539.6 ENST00000504675.6 ENST00000507802.6 ENST00000663250.1 ENST00000668669.1 ENST00000670146.1 ENST00000671622.1 |
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| CDS CAA 72 bp | CAGCCTAAATCGAATCCGTGTGTATCATTTTCTGCGTaGGTAAGTAGATCCACGTTTTCCTTTGGGAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: QPKSNPCVSFSA*VSRSTFSFGRL Trigger: GAGCCTCCCAAAGGAAAACGTGGATCTACTTACCAACGCAGAAAATGATACACACGGATTCGATTTAGGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000512322.2 ENST00000514130.6 ENST00000654792.1 |
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| CDS TCA 72 bp | CCTCTTCCTTTCTTCCTCCTGACATTAACATGCACATaGTGCCGAGAATTGCAGCAGTCATCTTACAACCAT | + |
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Preference number: 6 (lower is better) Translates to: PLPFFLLTLTCT*CRELQQSSYNH Trigger: ATGGTTGTAAGATGACTGCTGCAATTCTCGGCATCATGTGCATGTTAATGTCAGGAGGAAGAAAGGAAGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000503539.6 ENST00000504675.6 ENST00000507802.6 ENST00000512322.2 ENST00000652918.1 ENST00000653916.1 ENST00000654343.1 ENST00000654792.1 ENST00000656991.1 ENST00000661741.1 ENST00000663250.1 ENST00000667455.1 ENST00000668669.1 ENST00000670146.1 ENST00000671622.1 |
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| CDS GCA 72 bp | AGCATAAAGTCAACAGCCCACAGTTGCTCAAATCTGTaGTTTAGTTTCATTGCCACCACCAAACACTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: SIKSTAHSCSNL*FSFIATTKHFS Trigger: GGAGAAGTGTTTGGTGGTGGCAATGAAACTAAAGCACAGATTTGAGCAACTGTGGGCTGTTGACTTTATGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661741.1 |
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| CDS CCA 72 bp | GTTTGTCTGTTCCCACGTTTTACGTGTTCCTTAGGCTaGCACCTTTATGGTCCCTTTCTGATACTTAAAACG | + |
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Preference number: 6 (lower is better) Translates to: VCLFPRFTCSLG*HLYGPFLILKT Trigger: CGTTTTAAGTATCAGAAAGGGACCATAAAGGTGCCAGCCTAAGGAACACGTAAAACGTGGGAACAGACAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000654343.1 ENST00000654792.1 ENST00000661741.1 ENST00000663250.1 ENST00000670146.1 |
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| CDS CCA 72 bp | CTTAGCTTGCAATCTGTTGTTGCAAAGTTCAAACAATaGCTTTCCTCCCTACTTAGGCAAACACCAAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: LSLQSVVAKFKQ*LSSLLRQTPSR Trigger: CCTGCTTGGTGTTTGCCTAAGTAGGGAGGAAAGCCATTGTTTGAACTTTGCAACAACAGATTGCAAGCTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000661741.1 |
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| CDS CAA 72 bp | TGGTTATGTCACAAGGATCCACAGTGTTGTCCTCAGTaGCTCTCCCCTTGTGAATATATGATGGCTATAGGA | + |
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Preference number: 6 (lower is better) Translates to: WLCHKDPQCCPQ*LSPCEYMMAIG Trigger: TCCTATAGCCATCATATATTCACAAGGGGAGAGCAACTGAGGACAACACTGTGGATCCTTGTGACATAACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000503259.6 ENST00000514130.6 ENST00000666953.1 |
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| CDS CAA 90 bp | CCCAGGCACATGACTAAATCGAATCCGTGTGTATCATTTTCTGCGTaGGTAAGTAGATCCACGTTTTCCTTTGGGAGGCTCACTTTAATA | + |
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Preference number: 6 (lower is better) Translates to: PRHMTKSNPCVSFSA*VSRSTFSFGRLTLI Trigger: TATTAAAGTGAGCCTCCCAAAGGAAAACGTGGATCTACTTACCAACGCAGAAAATGATACACACGGATTCGATTTAGTCATGTGCCTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000654343.1 ENST00000656991.1 |
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| CDS CCA 72 bp | TCTGCCAGCACCATTTCTGAATCTATTACTGACAGATaGATGGCATTACTTAGACCATTCGGATGCCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: SASTISESITDR*MALLRPFGCLS Trigger: AGAAAGGCATCCGAATGGTCTAAGTAATGCCATCCATCTGTCAGTAATAGATTCAGAAATGGTGCTGGCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000504675.6 ENST00000652918.1 |
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| CDS CAA 72 bp | AGATATACATCTATCTCAGTGAGCAGAGGGATGACTTaGAATAGAATGGGAGGCAGGTTTGCTCTAAGCAGT | + |
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Preference number: 6 (lower is better) Translates to: RYTSISVSRGMT*NRMGGRFALSS Trigger: ACTGCTTAGAGCAAACCTGCCTCCCATTCTATTCAAAGTCATCCCTCTGCTCACTGAGATAGATGTATATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000503259.6 ENST00000514130.6 ENST00000666953.1 |
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| CDS CAA 72 bp | ATGACTAAATCGAATCCGTGTGTATCATTTTCTGCGTaGGTAAGTAGATCCACGTTTTCCTTTGGGAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: MTKSNPCVSFSA*VSRSTFSFGRL Trigger: GAGCCTCCCAAAGGAAAACGTGGATCTACTTACCAACGCAGAAAATGATACACACGGATTCGATTTAGTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000652918.1 ENST00000654343.1 ENST00000656991.1 |
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| CDS CAA 90 bp | GAATGTAGCGTGCCTAAATCGAATCCGTGTGTATCATTTTCTGCGTaGGTAAGTAGATCCACGTTTTCCTTTGGGAGGCTCACTTTAATA | + |
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Preference number: 6 (lower is better) Translates to: ECSVPKSNPCVSFSA*VSRSTFSFGRLTLI Trigger: TATTAAAGTGAGCCTCCCAAAGGAAAACGTGGATCTACTTACCAACGCAGAAAATGATACACACGGATTCGATTTAGGCACGCTACATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000503259.6 ENST00000503539.6 ENST00000504675.6 ENST00000507802.6 ENST00000663250.1 ENST00000668669.1 ENST00000670146.1 ENST00000671622.1 |
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| CDS CAA 90 bp | TCCAGAATACCCAGCACTCTTCTGCATACATCTCATTGGCCAGACTaGAATCACATACCCATTTCTGAATCTATTACTGACAGATGGATG | + |
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Preference number: 6 (lower is better) Translates to: SRIPSTLLHTSHWPD*NHIPISESITDRWM Trigger: CATCCATCTGTCAGTAATAGATTCAGAAATGGGTATGTGATTCAAGTCTGGCCAATGAGATGTATGCAGAAGAGTGCTGGGTATTCTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000503259.6 ENST00000514130.6 |
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| CDS CAA 90 bp | ACTGTACTCCAGCCTAAATCGAATCCGTGTGTATCATTTTCTGCGTaGGTAAGTAGATCCACGTTTTCCTTTGGGAGGCTCACTTTAATA | + |
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Preference number: 6 (lower is better) Translates to: TVLQPKSNPCVSFSA*VSRSTFSFGRLTLI Trigger: TATTAAAGTGAGCCTCCCAAAGGAAAACGTGGATCTACTTACCAACGCAGAAAATGATACACACGGATTCGATTTAGGCTGGAGTACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000512322.2 ENST00000514130.6 ENST00000654792.1 |
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| CDS CCA 72 bp | TCATGGCTATGGCTAATAAGATTTAAGATATACCTGTaGGTAGCACTGGCAGAAAGAAAGGCAAAAGGGAGA | + |
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Preference number: 6 (lower is better) Translates to: SWLWLIRFKIYL*VALAERKAKGR Trigger: TCTCCCTTTTGCCTTTCTTTCTGCCAGTGCTACCCACAGGTATATCTTAAATCTTATTAGCCATAGCCATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000503259.6 ENST00000514130.6 ENST00000666953.1 |
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| CDS CCA 72 bp | CTGTGGATCTCCATTTCTGAATCTATTACTGACAGATaGATGGCATTACTTAGACCATTCGGATGCCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: LWISISESITDR*MALLRPFGCLS Trigger: AGAAAGGCATCCGAATGGTCTAAGTAATGCCATCCATCTGTCAGTAATAGATTCAGAAATGGAGATCCACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666953.1 |
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| CDS CAA 72 bp | AAGCAACACTCTGACTTCATGTTGTTACTCAGCATTTaGTTCCTTATTGAAATGCCTGGCTCTGCACAACTG | + |
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Preference number: 6 (lower is better) Translates to: KQHSDFMLLLSI*FLIEMPGSAQL Trigger: CAGTTGTGCAGAGCCAGGCATTTCAATAAGGAACAAAATGCTGAGTAACAACATGAAGTCAGAGTGTTGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000503259.6 ENST00000504675.6 ENST00000507802.6 ENST00000656991.1 ENST00000663250.1 ENST00000668669.1 ENST00000671622.1 |
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| CDS CAA 90 bp | AGCAACACTCTGACTTCATGTTGTTACTCAGCATTTTGTTCCTTATaGAAATGCCTGGCTCTGCACAACTGGTTTGTAAAGTCTGAAGAT | + |
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Preference number: 6 (lower is better) Translates to: SNTLTSCCYSAFCSL*KCLALHNWFVKSED Trigger: ATCTTCAGACTTTACAAACCAGTTGTGCAGAGCCAGGCATTTCAATAAGGAACAAAATGCTGAGTAACAACATGAAGTCAGAGTGTTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000503259.6 ENST00000504675.6 ENST00000507802.6 ENST00000656991.1 ENST00000663250.1 ENST00000668669.1 ENST00000671622.1 |
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| CDS CAA 90 bp | ACAATGGCTCAAACAATAAATAAATGTATTGATTGGTTCACTGGCTaGGTTATGTCACAAGGATCCACAGTGTTGTCCTCAGTTGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: TMAQTINKCIDWFTG*VMSQGSTVLSSVAL Trigger: GAGAGCAACTGAGGACAACACTGTGGATCCTTGTGACATAACCAAGCCAGTGAACCAATCAATACATTTATTTATTGTTTGAGCCATTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000503259.6 ENST00000514130.6 ENST00000666953.1 |
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| CDS TCA 72 bp | TTTCATGTTCATTGCTGGTGTCCAAATGTCCACAGTTaGATTCTCAGGTTTGTGGTGAACAGATTTGGTAAC | + |
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Preference number: 6 (lower is better) Translates to: FHVHCWCPNVHS*ILRFVVNRFGN Trigger: GTTACCAAATCTGTTCACCACAAACCTGAGAATTCAACTGTGGACATTTGGACACCAGCAATGAACATGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000503539.6 ENST00000504675.6 ENST00000507802.6 ENST00000512322.2 ENST00000652918.1 ENST00000653916.1 ENST00000654343.1 ENST00000654792.1 ENST00000656991.1 ENST00000661741.1 ENST00000663250.1 ENST00000667455.1 ENST00000668669.1 ENST00000670146.1 ENST00000671622.1 |
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| CDS CCA 72 bp | CTCCAGAATTCCATTTCTGAATCTATTACTGACAGATaGATGGCATTACTTAGACCATTCGGATGCCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: LQNSISESITDR*MALLRPFGCLS Trigger: AGAAAGGCATCCGAATGGTCTAAGTAATGCCATCCATCTGTCAGTAATAGATTCAGAAATGGAATTCTGGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000503539.6 ENST00000654343.1 ENST00000656991.1 ENST00000661741.1 ENST00000667455.1 ENST00000670146.1 |
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| CDS GCA 72 bp | TCATGTTGTTACTCAGCATTTTGTTCCTTATTGAAATaGCTGGCTCTGCACAACTGGTTTGTAAAGTCTGAA | + |
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Preference number: 6 (lower is better) Translates to: SCCYSAFCSLLK*LALHNWFVKSE Trigger: TTCAGACTTTACAAACCAGTTGTGCAGAGCCAGGCATTTCAATAAGGAACAAAATGCTGAGTAACAACATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000503259.6 ENST00000504675.6 ENST00000507802.6 ENST00000656991.1 ENST00000663250.1 ENST00000668669.1 ENST00000671622.1 |
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| CDS CCA 72 bp | AATCACATACCCATTTCTGAATCTATTACTGACAGATaGATGGCATTACTTAGACCATTCGGATGCCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: NHIPISESITDR*MALLRPFGCLS Trigger: AGAAAGGCATCCGAATGGTCTAAGTAATGCCATCCATCTGTCAGTAATAGATTCAGAAATGGGTATGTGATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000503259.6 ENST00000514130.6 |
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| CDS CCA 72 bp | CCTAATCCAGTTATACCTAGTGGTGGTCCTAGTCTTTaGTCATGGCTATGGCTAATAAGATTTAAGATATAC | + |
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Preference number: 6 (lower is better) Translates to: PNPVIPSGGPSL*SWLWLIRFKIY Trigger: GTATATCTTAAATCTTATTAGCCATAGCCATGACCAAAGACTAGGACCACCACTAGGTATAACTGGATTAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000503259.6 ENST00000514130.6 ENST00000666953.1 |
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| CDS CAA 72 bp | ACAAAGTGTAGAAAAGCCTTAGCTTGCAATCTGTTGTaGCAAAGTTCAAACAATGGCTTTCCTCCCTACTTA | + |
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Preference number: 6 (lower is better) Translates to: TKCRKALACNLL*QSSNNGFPPYL Trigger: TAAGTAGGGAGGAAAGCCATTGTTTGAACTTTGCAACAACAGATTGCAAGCTAAGGCTTTTCTACACTTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000661741.1 |
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| CDS CCA 72 bp | ATCCTGATAATATGCGTCAAAGTTGCAGCTGGCAAGTaGTTACCATTGGGAAATGACTTCTTATATAAAGTT | + |
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Preference number: 6 (lower is better) Translates to: ILIICVKVAAGK*LPLGNDFLYKV Trigger: AACTTTATATAAGAAGTCATTTCCCAATGGTAACCACTTGCCAGCTGCAACTTTGACGCATATTATCAGGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 13 transcripts: ENST00000503539.6 ENST00000504675.6 ENST00000507802.6 ENST00000512322.2 ENST00000652918.1 ENST00000654343.1 ENST00000654792.1 ENST00000656991.1 ENST00000663250.1 ENST00000667455.1 ENST00000668669.1 ENST00000670146.1 ENST00000671622.1 |
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| CDS TCA 72 bp | GTAATATTCCCTGTAGTTGCCTTCTATCTCTCTAAGTaGATTCATTCAATTTATGCAACACCTTTCATCTTC | + |
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Preference number: 6 (lower is better) Translates to: VIFPVVAFYLSK*IHSIYATPFIF Trigger: GAAGATGAAAGGTGTTGCATAAATTGAATGAATTCACTTAGAGAGATAGAAGGCAACTACAGGGAATATTAC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000671622.1 |
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