Pregenerated sensors for LINC01085 (Homo sapiens)
Ensembl gene IDs: ENSG00000248698Ensembl transcript IDs: ENST00000502759.1, ENST00000506739.1, ENST00000511195.1, ENST00000511200.5, ENST00000512754.1
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GTTCCTCAGCCTCCTGATCCACTTCAGCCTGGTATCAGCTGTACATaGGGACTGTGTGGGGTCCAGATCCACTTCAGGCCAGACAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: VPQPPDPLQPGISCT*GLCGVQIHFRPDRR Trigger: TCTCCTGTCTGGCCTGAAGTGGATCTGGACCCCACACAGTCCCCATGTACAGCTGATACCAGGCTGAAGTGGATCAGGAGGCTGAGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000511200.5 ENST00000512754.1 |
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| CDS TCA 90 bp | CCCATAGAGTTGGAACCGCATTTCCTTTCTTTCCCAGGACTCTTCTaGCAGTGCCAAGTTGCACGCTGGGTTGTCATAGAATGTTCTGAA | + |
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Preference number: 5 (lower is better) Translates to: PIELEPHFLSFPGLF*QCQVARWVVIECSE Trigger: TTCAGAACATTCTATGACAACCCAGCGTGCAACTTGGCACTGTCAGAAGAGTCCTGGGAAAGAAAGGAAATGCGGTTCCAACTCTATGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506739.1 |
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| CDS GCA 90 bp | TTTGAGAAGTCTCCGGGTTCAGAGCTTCATTTGGGCTTCAAGTATTaGTCCATAATCATCCTGTGTTCATCTAAGCCTCCACTTGGGCAG | + |
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Preference number: 5 (lower is better) Translates to: FEKSPGSELHLGFKY*SIIILCSSKPPLGQ Trigger: CTGCCCAAGTGGAGGCTTAGATGAACACAGGATGATTATGGAGCAATACTTGAAGCCCAAATGAAGCTCTGAACCCGGAGACTTCTCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000511200.5 ENST00000512754.1 |
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| CDS CCA 90 bp | TTTGCTGGTGGCAACTTGGGATGCCAGATCTCATGCCCTGTGGTATaGCATTTTATCAATGTCTTTAAAGTGGTGGGAAAAGACAGAGAC | + |
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Preference number: 5 (lower is better) Translates to: FAGGNLGCQISCPVV*HFINVFKVVGKDRD Trigger: GTCTCTGTCTTTTCCCACCACTTTAAAGACATTGATAAAATGCCATACCACAGGGCATGAGATCTGGCATCCCAAGTTGCCACCAGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000502759.1 ENST00000511200.5 |
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| CDS CCA 90 bp | CTAGGTTTGCTGGTGGCAACTTGGGATGCCAGATCTCATGCCCTGTaGTATGGCATTTTATCAATGTCTTTAAAGTGGTGGGAAAAGACA | + |
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Preference number: 5 (lower is better) Translates to: LGLLVATWDARSHAL*YGILSMSLKWWEKT Trigger: TGTCTTTTCCCACCACTTTAAAGACATTGATAAAATGCCATACCACAGGGCATGAGATCTGGCATCCCAAGTTGCCACCAGCAAACCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000502759.1 ENST00000511200.5 |
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| CDS TCA 90 bp | CAGGTCTTCTGGAAACTCAGCCTCAAAGATAGAGCAGATGCTAAATaGCTGAGATATACCCATAGAGTTGGAACCTGGCTAAACTCCAGT | + |
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Preference number: 5 (lower is better) Translates to: QVFWKLSLKDRADAK*LRYTHRVGTWLNSS Trigger: ACTGGAGTTTAGCCAGGTTCCAACTCTATGGGTATATCTCAGTCATTTAGCATCTGCTCTATCTTTGAGGCTGAGTTTCCAGAAGACCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512754.1 |
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| CDS TCA 90 bp | CAGGTCTTCTGGAAACTCAGCCTCAAAGATAGAGCAGATGCTAAATaGCTGAGATATACCCATAGAGTTGGAACCCACACTTCTAGGTTT | + |
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Preference number: 5 (lower is better) Translates to: QVFWKLSLKDRADAK*LRYTHRVGTHTSRF Trigger: AAACCTAGAAGTGTGGGTTCCAACTCTATGGGTATATCTCAGTCATTTAGCATCTGCTCTATCTTTGAGGCTGAGTTTCCAGAAGACCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502759.1 |
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| CDS TCA 90 bp | TGGTGCTGCCTGAGGTGGTCAGATCTCATGAACTGTCAGCCCCACTaGTCACATCTATGCGATCTATATCTGTTATATATCCACATATTT | + |
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Preference number: 5 (lower is better) Translates to: WCCLRWSDLMNCQPH*SHLCDLYLLYIHIF Trigger: AAATATGTGGATATATAACAGATATAGATCGCATAGATGTGATCAGTGGGGCTGACAGTTCATGAGATCTGACCACCTCAGGCAGCACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511195.1 |
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| CDS TCA 90 bp | TCTTCTGGAAACTCAGCCTCAAAGATAGAGCAGATGCTAAATGACTaGGATATACCCATAGAGTTGGAACCGCATTTCCTTTCTTTCCCA | + |
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Preference number: 5 (lower is better) Translates to: SSGNSASKIEQMLND*DIPIELEPHFLSFP Trigger: TGGGAAAGAAAGGAAATGCGGTTCCAACTCTATGGGTATATCTCAGTCATTTAGCATCTGCTCTATCTTTGAGGCTGAGTTTCCAGAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506739.1 |
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| CDS TCA 90 bp | CAGGTCTTCTGGAAACTCAGCCTCAAAGATAGAGCAGATGCTAAATaGCTGAGATATACCCATAGAGTTGGAACCGCATTTCCTTTCTTT | + |
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Preference number: 5 (lower is better) Translates to: QVFWKLSLKDRADAK*LRYTHRVGTAFPFF Trigger: AAAGAAAGGAAATGCGGTTCCAACTCTATGGGTATATCTCAGTCATTTAGCATCTGCTCTATCTTTGAGGCTGAGTTTCCAGAAGACCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506739.1 |
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| CDS GCA 90 bp | AATCACAGCCCAGAGGGAGTGGTGAAGCCAAAAACACAACTGTGTTaGAACATCTGGATAATCCATACATTCTTAATAGTTGGCAATGAG | + |
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Preference number: 5 (lower is better) Translates to: NHSPEGVVKPKTQLC*NIWIIHTFLIVGNE Trigger: CTCATTGCCAACTATTAAGAATGTATGGATTATCCAGATGTTGCAACACAGTTGTGTTTTTGGCTTCACCACTCCCTCTGGGCTGTGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000502759.1 ENST00000506739.1 |
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| CDS GCA 90 bp | GATATCTCTGGGATGTTTTTATCAATTTCCAAGATTCTTATGCTATaGCATCTTCTTGGCTACTGTCTTTTGCTTCTGGTTGAATCAGGT | + |
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Preference number: 5 (lower is better) Translates to: DISGMFLSISKILML*HLLGYCLLLLVESG Trigger: ACCTGATTCAACCAGAAGCAAAAGACAGTAGCCAAGAAGATGGCATAGCATAAGAATCTTGGAAATTGATAAAAACATCCCAGAGATATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000502759.1 ENST00000506739.1 ENST00000512754.1 |
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| CDS GCA 90 bp | TGTTGGATATCTCTGGGATGTTTTTATCAATTTCCAAGATTCTTATaGTATGCCATCTTCTTGGCTACTGTCTTTTGCTTCTGGTTGAAT | + |
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Preference number: 5 (lower is better) Translates to: CWISLGCFYQFPRFL*YAIFLATVFCFWLN Trigger: ATTCAACCAGAAGCAAAAGACAGTAGCCAAGAAGATGGCATAGCATAAGAATCTTGGAAATTGATAAAAACATCCCAGAGATATCCAACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000502759.1 ENST00000506739.1 ENST00000512754.1 |
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| CDS CCA 72 bp | ACTTCAGCCTGGTATCAGCTGTACATGGGGACTGTGTaGGGTCCAGATCCACTTCAGGCCAGACAGGAGACC | + |
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Preference number: 6 (lower is better) Translates to: TSAWYQLYMGTV*GPDPLQARQET Trigger: GGTCTCCTGTCTGGCCTGAAGTGGATCTGGACCCCACACAGTCCCCATGTACAGCTGATACCAGGCTGAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000511200.5 ENST00000512754.1 |
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| CDS CCA 72 bp | CCTCCTGATCCACTTCAGCCTGGTATCAGCTGTACATaGGGACTGTGTGGGGTCCAGATCCACTTCAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: PPDPLQPGISCT*GLCGVQIHFRP Trigger: TGGCCTGAAGTGGATCTGGACCCCACACAGTCCCCATGTACAGCTGATACCAGGCTGAAGTGGATCAGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000511200.5 ENST00000512754.1 |
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| CDS GCA 72 bp | CAGAAGGGAAGAAAGGCCATGTACAGCCTTCCTACCTaGATGTGTAGGGCCTCTTACTTGGGCAGCCTGGTG | + |
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Preference number: 6 (lower is better) Translates to: QKGRKAMYSLPT*MCRASYLGSLV Trigger: CACCAGGCTGCCCAAGTAAGAGGCCCTACACATGCAGGTAGGAAGGCTGTACATGGCCTTTCTTCCCTTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000511195.1 |
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| CDS CCA 72 bp | TTGGAACCCACACTTCTAGGTTTGCTGGTGGCAACTTaGGATGCCAGATCTCATGCCCTGTGGTATGGCATT | + |
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Preference number: 6 (lower is better) Translates to: LEPTLLGLLVAT*DARSHALWYGI Trigger: AATGCCATACCACAGGGCATGAGATCTGGCATCCCAAGTTGCCACCAGCAAACCTAGAAGTGTGGGTTCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502759.1 |
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| CDS CAA 72 bp | GATATACCCATAGAGTTGGAACCCACACTTCTAGGTTaGCTGGTGGCAACTTGGGATGCCAGATCTCATGCC | + |
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Preference number: 6 (lower is better) Translates to: DIPIELEPTLLG*LVATWDARSHA Trigger: GGCATGAGATCTGGCATCCCAAGTTGCCACCAGCAAACCTAGAAGTGTGGGTTCCAACTCTATGGGTATATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502759.1 |
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| CDS TCA 72 bp | TTGGAACCGCATTTCCTTTCTTTCCCAGGACTCTTCTaGCAGTGCCAAGTTGCACGCTGGGTTGTCATAGAA | + |
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Preference number: 6 (lower is better) Translates to: LEPHFLSFPGLF*QCQVARWVVIE Trigger: TTCTATGACAACCCAGCGTGCAACTTGGCACTGTCAGAAGAGTCCTGGGAAAGAAAGGAAATGCGGTTCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506739.1 |
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| CDS CCA 72 bp | CTGGTGGCAACTTGGGATGCCAGATCTCATGCCCTGTaGTATGGCATTTTATCAATGTCTTTAAAGTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: LVATWDARSHAL*YGILSMSLKWW Trigger: CCACCACTTTAAAGACATTGATAAAATGCCATACCACAGGGCATGAGATCTGGCATCCCAAGTTGCCACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000502759.1 ENST00000511200.5 |
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| CDS TCA 72 bp | TCATTTTCGCATTTCCTTTCTTTCCCAGGACTCTTCTaGCAGTGCCAAGTTGCACGCTGGGTTGTCATAGAA | + |
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Preference number: 6 (lower is better) Translates to: SFSHFLSFPGLF*QCQVARWVVIE Trigger: TTCTATGACAACCCAGCGTGCAACTTGGCACTGTCAGAAGAGTCCTGGGAAAGAAAGGAAATGCGAAAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502759.1 |
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| CDS TCA 72 bp | GTGCCAAGTTGCACGCTGGGTTGTCATAGAATGTTCTaGAGTCGTGTAAAAGGAACTGGCACAAAGGAAAAA | + |
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Preference number: 6 (lower is better) Translates to: VPSCTLGCHRMF*SRVKGTGTKEK Trigger: TTTTTCCTTTGTGCCAGTTCCTTTTACACGACTTCAGAACATTCTATGACAACCCAGCGTGCAACTTGGCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000502759.1 ENST00000506739.1 ENST00000511200.5 ENST00000512754.1 |
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| CDS GCA 72 bp | AGGTTTGCTGGTGGCAACTTGGGATGCCAGATCTCATaGCCTGTGGTATGGCATTTTATCAATGTCTTTAAA | + |
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Preference number: 6 (lower is better) Translates to: RFAGGNLGCQIS*PVVWHFINVFK Trigger: TTTAAAGACATTGATAAAATGCCATACCACAGGGCATGAGATCTGGCATCCCAAGTTGCCACCAGCAAACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000502759.1 ENST00000511200.5 |
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| CDS CCA 72 bp | TGCTATGCCATCTTCTTGGCTACTGTCTTTTGCTTCTaGTTGAATCAGGTCTTCTGGAAACTCAGCCTCAAA | + |
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Preference number: 6 (lower is better) Translates to: CYAIFLATVFCF*LNQVFWKLSLK Trigger: TTTGAGGCTGAGTTTCCAGAAGACCTGATTCAACCAGAAGCAAAAGACAGTAGCCAAGAAGATGGCATAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000502759.1 ENST00000506739.1 ENST00000512754.1 |
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| CDS CAA 72 bp | ACAGGTTTTGAGAAGTCTCCGGGTTCAGAGCTTCATTaGGGCTTCAAGTATTGCTCCATAATCATCCTGTGT | + |
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Preference number: 6 (lower is better) Translates to: TGFEKSPGSELH*GFKYCSIIILC Trigger: ACACAGGATGATTATGGAGCAATACTTGAAGCCCAAATGAAGCTCTGAACCCGGAGACTTCTCAAAACCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000511200.5 ENST00000512754.1 |
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| CDS CAA 90 bp | GCATTGATGACAGGTTTTGAGAAGTCTCCGGGTTCAGAGCTTCATTaGGGCTTCAAGTATTGCTCCATAATCATCCTGTGTTCATCTAAG | + |
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Preference number: 6 (lower is better) Translates to: ALMTGFEKSPGSELH*GFKYCSIIILCSSK Trigger: CTTAGATGAACACAGGATGATTATGGAGCAATACTTGAAGCCCAAATGAAGCTCTGAACCCGGAGACTTCTCAAAACCTGTCATCAATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000511200.5 ENST00000512754.1 |
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| CDS TCA 72 bp | TGGAAACTCAGCCTCAAAGATAGAGCAGATGCTAAATaGCTGAGATATACCCATAGAGTTGGAACCCACACT | + |
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Preference number: 6 (lower is better) Translates to: WKLSLKDRADAK*LRYTHRVGTHT Trigger: AGTGTGGGTTCCAACTCTATGGGTATATCTCAGTCATTTAGCATCTGCTCTATCTTTGAGGCTGAGTTTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502759.1 |
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| CDS TCA 72 bp | ATGCCATCTTCTTGGCTACTGTCTTTTGCTTCTGGTTaGATCAGGTCTTCTGGAAACTCAGCCTCAAAGATA | + |
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Preference number: 6 (lower is better) Translates to: MPSSWLLSFASG*IRSSGNSASKI Trigger: TATCTTTGAGGCTGAGTTTCCAGAAGACCTGATTCAACCAGAAGCAAAAGACAGTAGCCAAGAAGATGGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000502759.1 ENST00000506739.1 ENST00000512754.1 |
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| CDS TCA 72 bp | TGGAAACTCAGCCTCAAAGATAGAGCAGATGCTAAATaGCTGAGATATACCCATAGAGTTGGAACCTGGCTA | + |
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Preference number: 6 (lower is better) Translates to: WKLSLKDRADAK*LRYTHRVGTWL Trigger: TAGCCAGGTTCCAACTCTATGGGTATATCTCAGTCATTTAGCATCTGCTCTATCTTTGAGGCTGAGTTTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000512754.1 |
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| CDS TCA 72 bp | CTGAGGTGGTCAGATCTCATGAACTGTCAGCCCCACTaGTCACATCTATGCGATCTATATCTGTTATATATC | + |
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Preference number: 6 (lower is better) Translates to: LRWSDLMNCQPH*SHLCDLYLLYI Trigger: GATATATAACAGATATAGATCGCATAGATGTGATCAGTGGGGCTGACAGTTCATGAGATCTGACCACCTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511195.1 |
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| CDS GCA 72 bp | TTCTTATGCTATGCCATCTTCTTGGCTACTGTCTTTTaGTTCTGGTTGAATCAGGTCTTCTGGAAACTCAGC | + |
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Preference number: 6 (lower is better) Translates to: FLCYAIFLATVF*FWLNQVFWKLS Trigger: GCTGAGTTTCCAGAAGACCTGATTCAACCAGAAGCAAAAGACAGTAGCCAAGAAGATGGCATAGCATAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000502759.1 ENST00000506739.1 ENST00000512754.1 |
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| CDS CAA 72 bp | TATGCCATCTTCTTGGCTACTGTCTTTTGCTTCTGGTaGAATCAGGTCTTCTGGAAACTCAGCCTCAAAGAT | + |
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Preference number: 6 (lower is better) Translates to: YAIFLATVFCFW*NQVFWKLSLKD Trigger: ATCTTTGAGGCTGAGTTTCCAGAAGACCTGATTCAACCAGAAGCAAAAGACAGTAGCCAAGAAGATGGCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000502759.1 ENST00000506739.1 ENST00000512754.1 |
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| CDS CAA 90 bp | TTCTTATGCTATGCCATCTTCTTGGCTACTGTCTTTTGCTTCTGGTaGAATCAGGTCTTCTGGAAACTCAGCCTCAAAGATAGAGCAGAT | + |
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Preference number: 6 (lower is better) Translates to: FLCYAIFLATVFCFW*NQVFWKLSLKDRAD Trigger: ATCTGCTCTATCTTTGAGGCTGAGTTTCCAGAAGACCTGATTCAACCAGAAGCAAAAGACAGTAGCCAAGAAGATGGCATAGCATAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000502759.1 ENST00000506739.1 ENST00000512754.1 |
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| CDS TCA 72 bp | AACTCAGCCTCAAAGATAGAGCAGATGCTAAATGACTaGGATATACCCATAGAGTTGGAACCCACACTTCTA | + |
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Preference number: 6 (lower is better) Translates to: NSASKIEQMLND*DIPIELEPTLL Trigger: TAGAAGTGTGGGTTCCAACTCTATGGGTATATCTCAGTCATTTAGCATCTGCTCTATCTTTGAGGCTGAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000502759.1 |
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| CDS TCA 72 bp | AACTCAGCCTCAAAGATAGAGCAGATGCTAAATGACTaGGATATACCCATAGAGTTGGAACCGCATTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: NSASKIEQMLND*DIPIELEPHFL Trigger: AAGGAAATGCGGTTCCAACTCTATGGGTATATCTCAGTCATTTAGCATCTGCTCTATCTTTGAGGCTGAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506739.1 |
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| CDS TCA 72 bp | TGGAAACTCAGCCTCAAAGATAGAGCAGATGCTAAATaGCTGAGATATACCCATAGAGTTGGAACCGCATTT | + |
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Preference number: 6 (lower is better) Translates to: WKLSLKDRADAK*LRYTHRVGTAF Trigger: AAATGCGGTTCCAACTCTATGGGTATATCTCAGTCATTTAGCATCTGCTCTATCTTTGAGGCTGAGTTTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506739.1 |
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| CDS CAA 72 bp | ATTCTTATGCTATGCCATCTTCTTGGCTACTGTCTTTaGCTTCTGGTTGAATCAGGTCTTCTGGAAACTCAG | + |
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Preference number: 6 (lower is better) Translates to: ILMLCHLLGYCL*LLVESGLLETQ Trigger: CTGAGTTTCCAGAAGACCTGATTCAACCAGAAGCAAAAGACAGTAGCCAAGAAGATGGCATAGCATAAGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000502759.1 ENST00000506739.1 ENST00000512754.1 |
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| CDS CAA 72 bp | CCCAGAGGGAGTGGTGAAGCCAAAAACACAACTGTGTaGCAACATCTGGATAATCCATACATTCTTAATAGT | + |
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Preference number: 6 (lower is better) Translates to: PRGSGEAKNTTV*QHLDNPYILNS Trigger: ACTATTAAGAATGTATGGATTATCCAGATGTTGCAACACAGTTGTGTTTTTGGCTTCACCACTCCCTCTGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000502759.1 ENST00000506739.1 |
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| CDS TCA 72 bp | CATACTTTCATGACAACACCTGGATATAGTTCACAGTaGTGGTCTACGATTCTGATAATGGCTTCTAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: HTFMTTPGYSSQ*WSTILIMASKW Trigger: CCACTTAGAAGCCATTATCAGAATCGTAGACCATCACTGTGAACTATATCCAGGTGTTGTCATGAAAGTATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000502759.1 ENST00000506739.1 |
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| CDS GCA 72 bp | CCAGAGGGAGTGGTGAAGCCAAAAACACAACTGTGTTaGAACATCTGGATAATCCATACATTCTTAATAGTT | + |
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Preference number: 6 (lower is better) Translates to: PEGVVKPKTQLC*NIWIIHTFLIV Trigger: AACTATTAAGAATGTATGGATTATCCAGATGTTGCAACACAGTTGTGTTTTTGGCTTCACCACTCCCTCTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000502759.1 ENST00000506739.1 |
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| CDS CAA 72 bp | TATCAATTTCCAAGATTCTTATGCTATGCCATCTTCTaGGCTACTGTCTTTTGCTTCTGGTTGAATCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: YQFPRFLCYAIF*ATVFCFWLNQV Trigger: GACCTGATTCAACCAGAAGCAAAAGACAGTAGCCAAGAAGATGGCATAGCATAAGAATCTTGGAAATTGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000502759.1 ENST00000506739.1 ENST00000512754.1 |
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| CDS CAA 90 bp | GGATGTTTTTATCAATTTCCAAGATTCTTATGCTATGCCATCTTCTaGGCTACTGTCTTTTGCTTCTGGTTGAATCAGGTCTTCTGGAAA | + |
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Preference number: 6 (lower is better) Translates to: GCFYQFPRFLCYAIF*ATVFCFWLNQVFWK Trigger: TTTCCAGAAGACCTGATTCAACCAGAAGCAAAAGACAGTAGCCAAGAAGATGGCATAGCATAAGAATCTTGGAAATTGATAAAAACATCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000502759.1 ENST00000506739.1 ENST00000512754.1 |
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| CDS TCA 72 bp | AGCACCATCTCCATGTTAACCCCAAACTTGTATCATTaGAAGTGGTTCAAAATTTCCATTTCAGTCATTTCC | + |
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Preference number: 6 (lower is better) Translates to: STISMLTPNLYH*KWFKISISVIS Trigger: GGAAATGACTGAAATGGAAATTTTGAACCACTTTCAATGATACAAGTTTGGGGTTAACATGGAGATGGTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000502759.1 ENST00000506739.1 |
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| CDS GCA 72 bp | TCTCTGGGATGTTTTTATCAATTTCCAAGATTCTTATaGTATGCCATCTTCTTGGCTACTGTCTTTTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: SLGCFYQFPRFL*YAIFLATVFCF Trigger: GAAGCAAAAGACAGTAGCCAAGAAGATGGCATAGCATAAGAATCTTGGAAATTGATAAAAACATCCCAGAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000502759.1 ENST00000506739.1 ENST00000512754.1 |
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| CDS CAA 90 bp | GACACAATGAACAGTAAAACCCTAGAGCAAATACTGCACTTTGGCTaGTTCTTAATATCTATTAGAATGCATCCCTTGCTTCTCTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: DTMNSKTLEQILHFG*FLISIRMHPLLLFS Trigger: AGAAAAGAGAAGCAAGGGATGCATTCTAATAGATATTAAGAACAAGCCAAAGTGCAGTATTTGCTCTAGGGTTTTACTGTTCATTGTGTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000502759.1 |
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| CDS TCA 72 bp | GATAAGAATACAATTATTGAAATGTGGTGTCTTCTGTaGAGCACCATCTCCATGTTAACCCCAAACTTGTAT | + |
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Preference number: 6 (lower is better) Translates to: DKNTIIEMWCLL*STISMLTPNLY Trigger: ATACAAGTTTGGGGTTAACATGGAGATGGTGCTTCACAGAAGACACCACATTTCAATAATTGTATTCTTATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000502759.1 ENST00000506739.1 |
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| CDS CAA 72 bp | AAGCACCATCTCCATGTTAACCCCAAACTTGTATCATaGAAAGTGGTTCAAAATTTCCATTTCAGTCATTTC | + |
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Preference number: 6 (lower is better) Translates to: KHHLHVNPKLVS*KVVQNFHFSHF Trigger: GAAATGACTGAAATGGAAATTTTGAACCACTTTCAATGATACAAGTTTGGGGTTAACATGGAGATGGTGCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000502759.1 ENST00000506739.1 |
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| CDS CAA 72 bp | AACAGTAAAACCCTAGAGCAAATACTGCACTTTGGCTaGTTCTTAATATCTATTAGAATGCATCCCTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: NSKTLEQILHFG*FLISIRMHPLL Trigger: AAGCAAGGGATGCATTCTAATAGATATTAAGAACAAGCCAAAGTGCAGTATTTGCTCTAGGGTTTTACTGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000502759.1 |
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