Pregenerated sensors for LINC01081 (Homo sapiens)
Ensembl gene IDs: ENSG00000268754Ensembl transcript IDs: ENST00000597373.2, ENST00000602425.2, ENST00000667546.1
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CGTGTCGCCACCACTCACGCTCCCACAACGTCCAGCGTCCATGCCTaGAGCCTGTTTCCTGGGAATTTCAGTCCATGTGGAGCAAGAGGC | + |
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Preference number: 5 (lower is better) Translates to: RVATTHAPTTSSVHA*SLFPGNFSPCGARG Trigger: GCCTCTTGCTCCACATGGACTGAAATTCCCAGGAAACAGGCTGCAGGCATGGACGCTGGACGTTGTGGGAGCGTGAGTGGTGGCGACACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597373.2 |
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| CDS GCA 90 bp | CCTCCGTGTCGCCACCACTCACGCTCCCACAACGTCCAGCGTCCATaGCTGCAGCCTGTTTCCTGGGAATTTCAGTCCATGTGGAGCAAG | + |
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Preference number: 5 (lower is better) Translates to: PPCRHHSRSHNVQRP*LQPVSWEFQSMWSK Trigger: CTTGCTCCACATGGACTGAAATTCCCAGGAAACAGGCTGCAGGCATGGACGCTGGACGTTGTGGGAGCGTGAGTGGTGGCGACACGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597373.2 |
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| CDS CCA 90 bp | TCGCTGTGTAGCCCCGGGTGTAATCCATGTCTGGAGATAGAACACTaGAGCTCAGTGGGGCCTGAGCTTTCTGGAGTGAGGGTCACCGCA | + |
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Preference number: 5 (lower is better) Translates to: SLCSPGCNPCLEIEH*SSVGPELSGVRVTA Trigger: TGCGGTGACCCTCACTCCAGAAAGCTCAGGCCCCACTGAGCTCCAGTGTTCTATCTCCAGACATGGATTACACCCGGGGCTACACAGCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602425.2 |
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| CDS TCA 90 bp | GGGCTCAGGTACAGAGATGATATACAAATCCCAGCTCTGCCACCTTaGATACATGACTTCCTCACTCTGGGCCTCCGTGTCGCCACCACT | + |
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Preference number: 5 (lower is better) Translates to: GLRYRDDIQIPALPP*IHDFLTLGLRVATT Trigger: AGTGGTGGCGACACGGAGGCCCAGAGTGAGGAAGTCATGTATTCAAGGTGGCAGAGCTGGGATTTGTATATCATCTCTGTACCTGAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597373.2 |
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| CDS TCA 90 bp | GGGCTCAGGTACAGAGATGATATACAAATCCCAGCTCTGCCACCTTaGATACATGACTTCCTCACTCTGGGCCTCCGTGTCGCCACCTCA | + |
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Preference number: 5 (lower is better) Translates to: GLRYRDDIQIPALPP*IHDFLTLGLRVATS Trigger: TGAGGTGGCGACACGGAGGCCCAGAGTGAGGAAGTCATGTATTCAAGGTGGCAGAGCTGGGATTTGTATATCATCTCTGTACCTGAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602425.2 |
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| CDS GCA 90 bp | GCACTGGCTAGTCTGGCTTTGAGGATTCAGCAGTATTTCAGCACCTaGTATCTCAGAACCAAGGTTGGCCCAGAGGAGACCCAAGTGCAT | + |
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Preference number: 5 (lower is better) Translates to: ALASLALRIQQYFST*YLRTKVGPEETQVH Trigger: ATGCACTTGGGTCTCCTCTGGGCCAACCTTGGTTCTGAGATAGCAGGTGCTGAAATACTGCTGAATCCTCAAAGCCAGACTAGCCAGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000597373.2 ENST00000602425.2 |
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| CDS CCA 90 bp | GCTTGGAGAAGTTACTTAGCTTTTCCGAGCCTTCGCTTCTTCATCTaGGAGGGTTGCTGCTTCCTGCTTCTCGGCTTTGTGGGGAGGATT | + |
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Preference number: 5 (lower is better) Translates to: AWRSYLAFPSLRFFI*EGCCFLLLGFVGRI Trigger: AATCCTCCCCACAAAGCCGAGAAGCAGGAAGCAGCAACCCTCCCAGATGAAGAAGCGAAGGCTCGGAAAAGCTAAGTAACTTCTCCAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000602425.2 ENST00000667546.1 |
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| CDS CCA 90 bp | CACCATTCTGGAGACTGGGAAATCCAAGAGCATGGTGCTGGCATCTaGTTGGCTTCTGGTAAGGGCCTCCACTGCATCATAACATTGATC | + |
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Preference number: 5 (lower is better) Translates to: HHSGDWEIQEHGAGI*LASGKGLHCIITLI Trigger: GATCAATGTTATGATGCAGTGGAGGCCCTTACCAGAAGCCAACCAGATGCCAGCACCATGCTCTTGGATTTCCCAGTCTCCAGAATGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000597373.2 ENST00000602425.2 |
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| CDS CCA 90 bp | AGAAGCAGACGCAAAATCTGCACCTGGAACCATCAGAGTGACACGTaGCAAAGTGGAGACCTTTGTGTTGTGGAAGGGCATGTGTACCGT | + |
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Preference number: 5 (lower is better) Translates to: RSRRKICTWNHQSDT*QSGDLCVVEGHVYR Trigger: ACGGTACACATGCCCTTCCACAACACAAAGGTCTCCACTTTGCCACGTGTCACTCTGATGGTTCCAGGTGCAGATTTTGCGTCTGCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000602425.2 ENST00000667546.1 |
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| CDS TCA 90 bp | CCTCCCCTGTGCAGAAAGGTGATAAGGAGACTTTCTCCATGGGGCTaGGAGCCAAGAATCCCTACTTGGAGCAAAGTCTGTCATCTTAGT | + |
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Preference number: 5 (lower is better) Translates to: PPLCRKVIRRLSPWG*EPRIPTWSKVCHLS Trigger: ACTAAGATGACAGACTTTGCTCCAAGTAGGGATTCTTGGCTCTCAGCCCCATGGAGAAAGTCTCCTTATCACCTTTCTGCACAGGGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602425.2 |
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| CDS TCA 90 bp | GAAGTCAAGAAGCAGACGCAAAATCTGCACCTGGAACCATCAGAGTaGCACGTGGCAAAGTGGAGACCTTTGTGTTGTGGAAGGGCATGT | + |
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Preference number: 5 (lower is better) Translates to: EVKKQTQNLHLEPSE*HVAKWRPLCCGRAC Trigger: ACATGCCCTTCCACAACACAAAGGTCTCCACTTTGCCACGTGTCACTCTGATGGTTCCAGGTGCAGATTTTGCGTCTGCTTCTTGACTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000602425.2 ENST00000667546.1 |
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| CDS TCA 90 bp | GAAATCATATTCCCATCAGGTGCCAGGCACTGGCTAGTCTGGCTTTaGGGATTCAGCAGTATTTCAGCACCTGCTATCTCAGAACCAAGG | + |
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Preference number: 5 (lower is better) Translates to: EIIFPSGARHWLVWL*GFSSISAPAISEPR Trigger: CCTTGGTTCTGAGATAGCAGGTGCTGAAATACTGCTGAATCCTCAAAGCCAGACTAGCCAGTGCCTGGCACCTGATGGGAATATGATTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000597373.2 ENST00000602425.2 |
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| CDS GCA 90 bp | AAGGATTTACAAGTGATCAAGATTTTTGCAGACAGGTCGCAGTCATaGGCTGTTTCTGTTCCCGGAGGGCAGTCTCCTTCTGGAACCTTC | + |
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Preference number: 5 (lower is better) Translates to: KDLQVIKIFADRSQS*AVSVPGGQSPSGTF Trigger: GAAGGTTCCAGAAGGAGACTGCCCTCCGGGAACAGAAACAGCGCATGACTGCGACCTGTCTGCAAAAATCTTGATCACTTGTAAATCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000602425.2 ENST00000667546.1 |
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| CDS CCA 90 bp | GGCCGCTCCCTGGGAAGTTCTGATCTAATATGTCCAGGCTCCTTCTaGGATCTGTTTATTAAGCATCAGGATGATTCATATGACTCCGCC | + |
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Preference number: 5 (lower is better) Translates to: GRSLGSSDLICPGSF*DLFIKHQDDSYDSA Trigger: GGCGGAGTCATATGAATCATCCTGATGCTTAATAAACAGATCCCAGAAGGAGCCTGGACATATTAGATCAGAACTTCCCAGGGAGCGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602425.2 |
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| CDS GCA 90 bp | GATAACTTATCAGGTGGAGAAGGATTTACAAGTGATCAAGATTTTTaGAGACAGGTCGCAGTCATGCGCTGTTTCTGTTCCCGGAGGGCA | + |
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Preference number: 5 (lower is better) Translates to: DNLSGGEGFTSDQDF*RQVAVMRCFCSRRA Trigger: TGCCCTCCGGGAACAGAAACAGCGCATGACTGCGACCTGTCTGCAAAAATCTTGATCACTTGTAAATCCTTCTCCACCTGATAAGTTATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000602425.2 ENST00000667546.1 |
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| CDS CCA 90 bp | GGCCCAATAAATGTTGGACATAAGGAATATAAGAGAATGAAAGGCTaGGTCTGTATTTCTGGGTGGTCTCTTCATTTCTGTTCGTTGAAA | + |
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Preference number: 5 (lower is better) Translates to: GPINVGHKEYKRMKG*VCISGWSLHFCSLK Trigger: TTTCAACGAACAGAAATGAAGAGACCACCCAGAAATACAGACCCAGCCTTTCATTCTCTTATATTCCTTATGTCCAACATTTATTGGGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000597373.2 ENST00000602425.2 |
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| CDS CAA 90 bp | GCATGGCGGCTGAAGTCGGGGCTGCTGGTCTCCCCCTGCAGGGATTaGAATCCCAGTCCCTCCTCTCACGAGCTGCGTCAGCTTGGAGAA | + |
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Preference number: 6 (lower is better) Translates to: AWRLKSGLLVSPCRD*NPSPSSHELRQLGE Trigger: TTCTCCAAGCTGACGCAGCTCGTGAGAGGAGGGACTGGGATTCAAATCCCTGCAGGGGGAGACCAGCAGCCCCGACTTCAGCCGCCATGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000602425.2 ENST00000667546.1 |
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| CDS GCA 72 bp | CGCCACCACTCACGCTCCCACAACGTCCAGCGTCCATaGCTGCAGCCTGTTTCCTGGGAATTTCAGTCCATG | + |
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Preference number: 6 (lower is better) Translates to: RHHSRSHNVQRP*LQPVSWEFQSM Trigger: CATGGACTGAAATTCCCAGGAAACAGGCTGCAGGCATGGACGCTGGACGTTGTGGGAGCGTGAGTGGTGGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597373.2 |
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| CDS TCA 72 bp | AACACTGGAGCTCAGTGGGGCCTGAGCTTTCTGGAGTaGGGGTCACCGCAGGGCATGCACTGGAAATCCAGA | + |
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Preference number: 6 (lower is better) Translates to: NTGAQWGLSFLE*GSPQGMHWKSR Trigger: TCTGGATTTCCAGTGCATGCCCTGCGGTGACCCTCACTCCAGAAAGCTCAGGCCCCACTGAGCTCCAGTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602425.2 |
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| CDS TCA 72 bp | ATGTCTGGAGATAGAACACTGGAGCTCAGTGGGGCCTaGGCTTTCTGGAGTGAGGGTCACCGCAGGGCATGC | + |
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Preference number: 6 (lower is better) Translates to: MSGDRTLELSGA*AFWSEGHRRAC Trigger: GCATGCCCTGCGGTGACCCTCACTCCAGAAAGCTCAGGCCCCACTGAGCTCCAGTGTTCTATCTCCAGACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602425.2 |
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| CDS CCA 72 bp | CAGCTCTGCCACCTTGAATACATGACTTCCTCACTCTaGGCCTCCGTGTCGCCACCACTCACGCTCCCACAA | + |
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Preference number: 6 (lower is better) Translates to: QLCHLEYMTSSL*ASVSPPLTLPQ Trigger: TTGTGGGAGCGTGAGTGGTGGCGACACGGAGGCCCAGAGTGAGGAAGTCATGTATTCAAGGTGGCAGAGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597373.2 |
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| CDS CCA 72 bp | CCGATTGGAATGGGACAGGCCTGGAAAGGGCCTGATTaGGATGAGCAGTGTCTAGGGTTCCGTCTCCACCTG | + |
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Preference number: 6 (lower is better) Translates to: PIGMGQAWKGPD*DEQCLGFRLHL Trigger: CAGGTGGAGACGGAACCCTAGACACTGCTCATCCCAATCAGGCCCTTTCCAGGCCTGTCCCATTCCAATCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000597373.2 ENST00000602425.2 |
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| CDS GCA 72 bp | ACCACTCACGCTCCCACAACGTCCAGCGTCCATGCCTaGAGCCTGTTTCCTGGGAATTTCAGTCCATGTGGA | + |
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Preference number: 6 (lower is better) Translates to: TTHAPTTSSVHA*SLFPGNFSPCG Trigger: TCCACATGGACTGAAATTCCCAGGAAACAGGCTGCAGGCATGGACGCTGGACGTTGTGGGAGCGTGAGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597373.2 |
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| CDS CCA 72 bp | CACAACGTCCAGCGTCCATGCCTGCAGCCTGTTTCCTaGGAATTTCAGTCCATGTGGAGCAAGAGGCCAGTC | + |
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Preference number: 6 (lower is better) Translates to: HNVQRPCLQPVS*EFQSMWSKRPV Trigger: GACTGGCCTCTTGCTCCACATGGACTGAAATTCCCAGGAAACAGGCTGCAGGCATGGACGCTGGACGTTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000597373.2 |
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| CDS CCA 72 bp | AGCCCCGGGTGTAATCCATGTCTGGAGATAGAACACTaGAGCTCAGTGGGGCCTGAGCTTTCTGGAGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: SPGCNPCLEIEH*SSVGPELSGVR Trigger: CCTCACTCCAGAAAGCTCAGGCCCCACTGAGCTCCAGTGTTCTATCTCCAGACATGGATTACACCCGGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602425.2 |
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| CDS GCA 72 bp | GCTTTTCCGAGCCTTCGCTTCTTCATCTGGGAGGGTTaGTGCTTCCTGCTTCTCGGCTTTGTGGGGAGGATT | + |
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Preference number: 6 (lower is better) Translates to: AFPSLRFFIWEG*CFLLLGFVGRI Trigger: AATCCTCCCCACAAAGCCGAGAAGCAGGAAGCAGCAACCCTCCCAGATGAAGAAGCGAAGGCTCGGAAAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000602425.2 ENST00000667546.1 |
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| CDS GCA 72 bp | GCCTTCGCTTCTTCATCTGGGAGGGTTGCTGCTTCCTaGTTCTCGGCTTTGTGGGGAGGATTCTGTGAGCTA | + |
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Preference number: 6 (lower is better) Translates to: AFASSSGRVAAS*FSALWGGFCEL Trigger: TAGCTCACAGAATCCTCCCCACAAAGCCGAGAAGCAGGAAGCAGCAACCCTCCCAGATGAAGAAGCGAAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667546.1 |
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| CDS CCA 72 bp | GCAGTGTCTAGGGTTCCGTCTCCACCTGCACCATTCTaGAGACTGGGAAATCCAAGAGCATGGTGCTGGCAT | + |
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Preference number: 6 (lower is better) Translates to: AVSRVPSPPAPF*RLGNPRAWCWH Trigger: ATGCCAGCACCATGCTCTTGGATTTCCCAGTCTCCAGAATGGTGCAGGTGGAGACGGAACCCTAGACACTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000597373.2 ENST00000602425.2 |
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| CDS CAA 72 bp | AGCTTTTCCGAGCCTTCGCTTCTTCATCTGGGAGGGTaGCTGCTTCCTGCTTCTCGGCTTTGTGGGGAGGAT | + |
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Preference number: 6 (lower is better) Translates to: SFSEPSLLHLGG*LLPASRLCGED Trigger: ATCCTCCCCACAAAGCCGAGAAGCAGGAAGCAGCAACCCTCCCAGATGAAGAAGCGAAGGCTCGGAAAAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000602425.2 ENST00000667546.1 |
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| CDS CCA 72 bp | GGAGACTGGGAAATCCAAGAGCATGGTGCTGGCATCTaGTTGGCTTCTGGTAAGGGCCTCCACTGCATCATA | + |
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Preference number: 6 (lower is better) Translates to: GDWEIQEHGAGI*LASGKGLHCII Trigger: TATGATGCAGTGGAGGCCCTTACCAGAAGCCAACCAGATGCCAGCACCATGCTCTTGGATTTCCCAGTCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000597373.2 ENST00000602425.2 |
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| CDS CCA 72 bp | GAATCCCAGTCCCTCCTCTCACGAGCTGCGTCAGCTTaGAGAAGTTACTTAGCTTTTCCGAGCCTTCGCTTC | + |
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Preference number: 6 (lower is better) Translates to: ESQSLLSRAASA*RSYLAFPSLRF Trigger: GAAGCGAAGGCTCGGAAAAGCTAAGTAACTTCTCCAAGCTGACGCAGCTCGTGAGAGGAGGGACTGGGATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000602425.2 ENST00000667546.1 |
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| CDS TCA 72 bp | GAAATCCAGATCCCTGGGCCGCTCCCTGGGAAGTTCTaGTCTAATATGTCCAGGCTCCTTCTGGGATCTGTT | + |
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Preference number: 6 (lower is better) Translates to: EIQIPGPLPGKF*SNMSRLLLGSV Trigger: AACAGATCCCAGAAGGAGCCTGGACATATTAGATCAGAACTTCCCAGGGAGCGGCCCAGGGATCTGGATTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602425.2 |
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| CDS CCA 72 bp | TCTGGGAGGGTTGCTGCTTCCTGCTTCTCGGCTTTGTaGGGAGGATTCTGTGAGCTAAAATACATGGCACGT | + |
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Preference number: 6 (lower is better) Translates to: SGRVAASCFSAL*GGFCELKYMAR Trigger: ACGTGCCATGTATTTTAGCTCACAGAATCCTCCCCACAAAGCCGAGAAGCAGGAAGCAGCAACCCTCCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667546.1 |
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| CDS CAA 90 bp | AAGTTACTTAGCTTTTCCGAGCCTTCGCTTCTTCATCTGGGAGGGTaGCTGCTTCCTGCTTCTCGGCTTTGTGGGGAGGATTCTGTGAGC | + |
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Preference number: 6 (lower is better) Translates to: KLLSFSEPSLLHLGG*LLPASRLCGEDSVS Trigger: GCTCACAGAATCCTCCCCACAAAGCCGAGAAGCAGGAAGCAGCAACCCTCCCAGATGAAGAAGCGAAGGCTCGGAAAAGCTAAGTAACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667546.1 |
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| CDS CAA 90 bp | AAGTTACTTAGCTTTTCCGAGCCTTCGCTTCTTCATCTGGGAGGGTaGCTGCTTCCTGCTTCTCGGCTTTGTGGGGAGGATTCTGTGAGT | + |
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Preference number: 6 (lower is better) Translates to: KLLSFSEPSLLHLGG*LLPASRLCGEDSVS Trigger: ACTCACAGAATCCTCCCCACAAAGCCGAGAAGCAGGAAGCAGCAACCCTCCCAGATGAAGAAGCGAAGGCTCGGAAAAGCTAAGTAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000602425.2 |
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| CDS TCA 72 bp | TTCCCATCAGGTGCCAGGCACTGGCTAGTCTGGCTTTaGGGATTCAGCAGTATTTCAGCACCTGCTATCTCA | + |
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Preference number: 6 (lower is better) Translates to: FPSGARHWLVWL*GFSSISAPAIS Trigger: TGAGATAGCAGGTGCTGAAATACTGCTGAATCCTCAAAGCCAGACTAGCCAGTGCCTGGCACCTGATGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000597373.2 ENST00000602425.2 |
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| CDS GCA 72 bp | AGTCTGGCTTTGAGGATTCAGCAGTATTTCAGCACCTaGTATCTCAGAACCAAGGTTGGCCCAGAGGAGACC | + |
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Preference number: 6 (lower is better) Translates to: SLALRIQQYFST*YLRTKVGPEET Trigger: GGTCTCCTCTGGGCCAACCTTGGTTCTGAGATAGCAGGTGCTGAAATACTGCTGAATCCTCAAAGCCAGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000597373.2 ENST00000602425.2 |
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| CDS CCA 72 bp | AGTTACTTAGCTTTTCCGAGCCTTCGCTTCTTCATCTaGGAGGGTTGCTGCTTCCTGCTTCTCGGCTTTGTG | + |
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Preference number: 6 (lower is better) Translates to: SYLAFPSLRFFI*EGCCFLLLGFV Trigger: CACAAAGCCGAGAAGCAGGAAGCAGCAACCCTCCCAGATGAAGAAGCGAAGGCTCGGAAAAGCTAAGTAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000602425.2 ENST00000667546.1 |
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| CDS CCA 72 bp | CGCAAAATCTGCACCTGGAACCATCAGAGTGACACGTaGCAAAGTGGAGACCTTTGTGTTGTGGAAGGGCAT | + |
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Preference number: 6 (lower is better) Translates to: RKICTWNHQSDT*QSGDLCVVEGH Trigger: ATGCCCTTCCACAACACAAAGGTCTCCACTTTGCCACGTGTCACTCTGATGGTTCCAGGTGCAGATTTTGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000602425.2 ENST00000667546.1 |
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| CDS GCA 72 bp | GGCTCAGGTACAGAGATGATATACAAATCCCAGCTCTaGCACCTTGAATACATGACTTCCTCACTCTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: GSGTEMIYKSQL*HLEYMTSSLWA Trigger: GGCCCAGAGTGAGGAAGTCATGTATTCAAGGTGGCAGAGCTGGGATTTGTATATCATCTCTGTACCTGAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000597373.2 ENST00000602425.2 |
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| CDS TCA 72 bp | TGCAGAAAGGTGATAAGGAGACTTTCTCCATGGGGCTaGGAGCCAAGAATCCCTACTTGGAGCAAAGTCTGT | + |
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Preference number: 6 (lower is better) Translates to: CRKVIRRLSPWG*EPRIPTWSKVC Trigger: ACAGACTTTGCTCCAAGTAGGGATTCTTGGCTCTCAGCCCCATGGAGAAAGTCTCCTTATCACCTTTCTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602425.2 |
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| CDS CAA 72 bp | GTCTGTATTTCTGGGTGGTCTCTTCATTTCTGTTCGTaGAAATCATATTCCCATCAGGTGCCAGGCACTGGC | + |
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Preference number: 6 (lower is better) Translates to: VCISGWSLHFCS*KSYSHQVPGTG Trigger: GCCAGTGCCTGGCACCTGATGGGAATATGATTTCAACGAACAGAAATGAAGAGACCACCCAGAAATACAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000597373.2 ENST00000602425.2 |
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| CDS GCA 72 bp | TCAGGTGGAGAAGGATTTACAAGTGATCAAGATTTTTaGAGACAGGTCGCAGTCATGCGCTGTTTCTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: SGGEGFTSDQDF*RQVAVMRCFCS Trigger: GGAACAGAAACAGCGCATGACTGCGACCTGTCTGCAAAAATCTTGATCACTTGTAAATCCTTCTCCACCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000602425.2 ENST00000667546.1 |
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| CDS CCA 72 bp | CTGGGAAGTTCTGATCTAATATGTCCAGGCTCCTTCTaGGATCTGTTTATTAAGCATCAGGATGATTCATAT | + |
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Preference number: 6 (lower is better) Translates to: LGSSDLICPGSF*DLFIKHQDDSY Trigger: ATATGAATCATCCTGATGCTTAATAAACAGATCCCAGAAGGAGCCTGGACATATTAGATCAGAACTTCCCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602425.2 |
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