Pregenerated sensors for LINC01076 (Homo sapiens)

Ensembl gene IDs: ENSG00000225105

Ensembl transcript IDs: ENST00000435725.2

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	ACGACCTTCACGAGAGTCCAGATGGGGAGCTGTACACTCAAGGTCTaGAATCCACAACAAGGGAGATTCTTAACCCGTGCAGAGACAGGT	+
Preference number: 5 (lower is better) Translates to: TTFTRVQMGSCTLKV*NPQQGRFLTRAETG Trigger: ACCTGTCTCTGCACGGGTTAAGAATCTCCCTTGTTGTGGATTTCAGACCTTGAGTGTACAGCTCCCCATCTGGACTCTCGTGAAGGTCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435725.2
CDS CCA 90 bp	AGATGCTCTGTGTGTTGTTTACCACGACCTTCACGAGAGTCCAGATaGGGAGCTGTACACTCAAGGTCTGAAATCCACAACAAGGGAGAT	+
Preference number: 5 (lower is better) Translates to: RCSVCCLPRPSRESR*GAVHSRSEIHNKGD Trigger: ATCTCCCTTGTTGTGGATTTCAGACCTTGAGTGTACAGCTCCCCATCTGGACTCTCGTGAAGGTCGTGGTAAACAACACACAGAGCATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435725.2
CDS GCA 72 bp	AGCTGCCACCGGCCAGTCTCCCCCACGACCCAGCGGTaGTTTTCTCTCTCCAGAAATGGGCACCAGACAAGG	+
Preference number: 6 (lower is better) Translates to: SCHRPVSPTTQR*FSLSRNGHQTR Trigger: CCTTGTCTGGTGCCCATTTCTGGAGAGAGAAAAGCACCGCTGGGTCGTGGGGGAGACTGGCCGGTGGCAGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000435725.2
CDS TCA 72 bp	ACAACAAGGGAGATTCTTAACCCGTGCAGAGACAGGTaGGATGCCAGAAGCTGCCACCGGCCAGTCTCCCCC	+
Preference number: 6 (lower is better) Translates to: TTREILNPCRDR*DARSCHRPVSP Trigger: GGGGGAGACTGGCCGGTGGCAGCTTCTGGCATCTCACCTGTCTCTGCACGGGTTAAGAATCTCCCTTGTTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435725.2
CDS TCA 72 bp	ACGAGAGTCCAGATGGGGAGCTGTACACTCAAGGTCTaGAATCCACAACAAGGGAGATTCTTAACCCGTGCA	+
Preference number: 6 (lower is better) Translates to: TRVQMGSCTLKV*NPQQGRFLTRA Trigger: TGCACGGGTTAAGAATCTCCCTTGTTGTGGATTTCAGACCTTGAGTGTACAGCTCCCCATCTGGACTCTCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000435725.2
CDS CCA 72 bp	GTGTGTTGTTTACCACGACCTTCACGAGAGTCCAGATaGGGAGCTGTACACTCAAGGTCTGAAATCCACAAC	+
Preference number: 6 (lower is better) Translates to: VCCLPRPSRESR*GAVHSRSEIHN Trigger: GTTGTGGATTTCAGACCTTGAGTGTACAGCTCCCCATCTGGACTCTCGTGAAGGTCGTGGTAAACAACACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000435725.2

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