Pregenerated sensors for LINC01074 (Homo sapiens)
Ensembl gene IDs: ENSG00000227611Ensembl transcript IDs: ENST00000422527.1
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TGCCAAAGCTGCTGGACTGTGGACCATACTTTGAATAGCAAGGATTaGGAGGTAGAAAACTACTGGAAGCAGCATCTCTTACTGCTCCAC | + |
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Preference number: 5 (lower is better) Translates to: CQSCWTVDHTLNSKD*EVENYWKQHLLLLH Trigger: GTGGAGCAGTAAGAGATGCTGCTTCCAGTAGTTTTCTACCTCTCAATCCTTGCTATTCAAAGTATGGTCCACAGTCCAGCAGCTTTGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422527.1 |
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| CDS GCA 90 bp | TTGTTTCTTCTTGCTTTCATTTTGCAAGCTGATATAGAATGGCGGTaGTACTCAAACTTTAATATGCATATTATCACCAGTGGATCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LFLLAFILQADIEWR*YSNFNMHIITSGSS Trigger: AGAAGATCCACTGGTGATAATATGCATATTAAAGTTTGAGTAGCACCGCCATTCTATATCAGCTTGCAAAATGAAAGCAAGAAGAAACAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422527.1 |
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| CDS TCA 72 bp | TGCTGGACTGTGGACCATACTTTGAATAGCAAGGATTaGGAGGTAGAAAACTACTGGAAGCAGCATCTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: CWTVDHTLNSKD*EVENYWKQHLL Trigger: TAAGAGATGCTGCTTCCAGTAGTTTTCTACCTCTCAATCCTTGCTATTCAAAGTATGGTCCACAGTCCAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422527.1 |
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| CDS TCA 72 bp | CTGGTATTGGCTGGTGTCGCCTCAAAACAGAGTAGATaGTTCCATACTAATGACTTGGTTGAAGAGAAATTT | + |
|
Preference number: 6 (lower is better) Translates to: LVLAGVASKQSR*FHTNDLVEEKF Trigger: AAATTTCTCTTCAACCAAGTCATTAGTATGGAATCATCTACTCTGTTTTGAGGCGACACCAGCCAATACCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422527.1 |
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| CDS GCA 72 bp | CTTGCTTTCATTTTGCAAGCTGATATAGAATGGCGGTaGTACTCAAACTTTAATATGCATATTATCACCAGT | + |
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Preference number: 6 (lower is better) Translates to: LAFILQADIEWR*YSNFNMHIITS Trigger: ACTGGTGATAATATGCATATTAAAGTTTGAGTAGCACCGCCATTCTATATCAGCTTGCAAAATGAAAGCAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422527.1 |
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