Pregenerated sensors for LINC01072 (Homo sapiens)

Ensembl gene IDs: ENSG00000236076

Ensembl transcript IDs: ENST00000455848.1

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	AGCTGGGCTTTCAGTGATAAAATCAACCCCTTCTCTCTTGGTGAGTaGTCCTCCATGTCACTAGCCAGCAACGTTCCTCAAACAGGAGAA	+
Preference number: 5 (lower is better) Translates to: SWAFSDKINPFSLGE*SSMSLASNVPQTGE Trigger: TTCTCCTGTTTGAGGAACGTTGCTGGCTAGTGACATGGAGGAGCACTCACCAAGAGAGAAGGGGTTGATTTTATCACTGAAAGCCCAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455848.1
CDS GCA 72 bp	TTCAGTGATAAAATCAACCCCTTCTCTCTTGGTGAGTaGTCCTCCATGTCACTAGCCAGCAACGTTCCTCAA	+
Preference number: 6 (lower is better) Translates to: FSDKINPFSLGE*SSMSLASNVPQ Trigger: TTGAGGAACGTTGCTGGCTAGTGACATGGAGGAGCACTCACCAAGAGAGAAGGGGTTGATTTTATCACTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000455848.1
CDS CAA 90 bp	AAGGAGTTTCTGCTATCTCTGACACAAAACTCTTTAACATCTTTTTaGCCTCGTGTCTCTAACTTCCTGCATTTCACTAGAATGTGTTCC	+
Preference number: 6 (lower is better) Translates to: KEFLLSLTQNSLTSF*PRVSNFLHFTRMCS Trigger: GGAACACATTCTAGTGAAATGCAGGAAGTTAGAGACACGAGGCAAAAAAGATGTTAAAGAGTTTTGTGTCAGAGATAGCAGAAACTCCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000455848.1

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