Pregenerated sensors for LINC01069 (Homo sapiens)
Ensembl gene IDs: ENSG00000236133Ensembl transcript IDs: ENST00000452933.2, ENST00000662401.1, ENST00000662574.1, ENST00000665945.1, ENST00000666633.1, ENST00000670477.1
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | AGGGGGACGATGAATGCCAGCTGGATTCCAGTCCACTCCCCAGACTaGATGATAAGGCTCTACCACCGGGAATGGATCATGTCTGTTCAA | + |
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Preference number: 5 (lower is better) Translates to: RGTMNASWIPVHSPD*MIRLYHREWIMSVQ Trigger: TTGAACAGACATGATCCATTCCCGGTGGTAGAGCCTTATCATTCAGTCTGGGGAGTGGACTGGAATCCAGCTGGCATTCATCGTCCCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666633.1 |
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| CDS CCA 90 bp | AAGGCTCTACCACCGGGAATGGATCATGTCTGTTCAAAGCCACAATaGACAGTGTCCTCTTCTGTCATTGCAGCTACACCATCCAAACTC | + |
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Preference number: 5 (lower is better) Translates to: KALPPGMDHVCSKPQ*TVSSSVIAATPSKL Trigger: GAGTTTGGATGGTGTAGCTGCAATGACAGAAGAGGACACTGTCCATTGTGGCTTTGAACAGACATGATCCATTCCCGGTGGTAGAGCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000666633.1 |
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| CDS GCA 90 bp | TCAGCAAATTTGGTTTATCCAGAAGCTTCTCTCCTTAGTTGCAGATaGCACCTTCCCATTGTGTCCTCACACCATCTTGCCTCTGTGCTT | + |
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Preference number: 5 (lower is better) Translates to: SANLVYPEASLLSCR*HLPIVSSHHLASVL Trigger: AAGCACAGAGGCAAGATGGTGTGAGGACACAATGGGAAGGTGGCATCTGCAACTAAGGAGAGAAGCTTCTGGATAAACCAAATTTGCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000452933.2 ENST00000662401.1 ENST00000662574.1 ENST00000665945.1 ENST00000670477.1 |
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| CDS GCA 90 bp | AAGAGGTCAGCAAATTTGGTTTATCCAGAAGCTTCTCTCCTTAGTTaGAGATGCCACCTTCCCATTGTGTCCTCACACCATCTTGCCTCT | + |
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Preference number: 5 (lower is better) Translates to: KRSANLVYPEASLLS*RCHLPIVSSHHLAS Trigger: AGAGGCAAGATGGTGTGAGGACACAATGGGAAGGTGGCATCTGCAACTAAGGAGAGAAGCTTCTGGATAAACCAAATTTGCTGACCTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000452933.2 ENST00000662401.1 ENST00000662574.1 ENST00000665945.1 ENST00000670477.1 |
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| CDS CCA 90 bp | ACAGGGAAAATGCAGGAGTCCCCTTTGTACATCAATGTAGTTCTTTaGTTGCTCTTTGCCACTGGGAGCAGCTACAAGATGATGGAACTT | + |
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Preference number: 5 (lower is better) Translates to: TGKMQESPLYINVVL*LLFATGSSYKMMEL Trigger: AAGTTCCATCATCTTGTAGCTGCTCCCAGTGGCAAAGAGCAACCAAAGAACTACATTGATGTACAAAGGGGACTCCTGCATTTTCCCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665945.1 |
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| CDS CCA 90 bp | ATTGGAATTTCCAAAAGCCACCAGACACCAATGATACACCACAGATaGGTGTCCCTGAGAGTAGAATTAGAACTACTCCCCTCAATGTGG | + |
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Preference number: 5 (lower is better) Translates to: IGISKSHQTPMIHHR*VSLRVELELLPSMW Trigger: CCACATTGAGGGGAGTAGTTCTAATTCTACTCTCAGGGACACCCATCTGTGGTGTATCATTGGTGTCTGGTGGCTTTTGGAAATTCCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666633.1 |
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| CDS TCA 90 bp | CCATCTTCCATGATGGTCCAACTAGACACTCCCCATTGTGACTGTTaGTGGAAAATTCTTCCATGTTTGGAGAAACCACAGTTACTGATT | + |
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Preference number: 5 (lower is better) Translates to: PSSMMVQLDTPHCDC*WKILPCLEKPQLLI Trigger: AATCAGTAACTGTGGTTTCTCCAAACATGGAAGAATTTTCCATCAACAGTCACAATGGGGAGTGTCTAGTTGGACCATCATGGAAGATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000452933.2 ENST00000662401.1 ENST00000665945.1 ENST00000666633.1 ENST00000670477.1 |
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| CDS GCA 90 bp | TGCCAGGAGTTGAAAACTGTACTGAGAAAGTCTATTCATGCTGACTaGAAATATTACCAGTGGGAGGAAAATCGAGTGTGTCCAATTTCA | + |
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Preference number: 5 (lower is better) Translates to: CQELKTVLRKSIHAD*KYYQWEENRVCPIS Trigger: TGAAATTGGACACACTCGATTTTCCTCCCACTGGTAATATTTGCAGTCAGCATGAATAGACTTTCTCAGTACAGTTTTCAACTCCTGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000452933.2 ENST00000662401.1 ENST00000666633.1 ENST00000670477.1 |
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| CDS CCA 90 bp | AGATGCATGGTCAGTGCCCCTAAATCTTGCTTCTCAGTGTTAGTTTaGAGCCTGAGAAAGAATGGCAGCTTTGGAAAAGTAAATTTAAAA | + |
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Preference number: 5 (lower is better) Translates to: RCMVSAPKSCFSVLV*SLRKNGSFGKVNLK Trigger: TTTTAAATTTACTTTTCCAAAGCTGCCATTCTTTCTCAGGCTCCAAACTAACACTGAGAAGCAAGATTTAGGGGCACTGACCATGCATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666633.1 |
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| CDS CCA 90 bp | ACTGTACTGAGAAAGTCTATTCATGCTGACTGCAAATATTACCAGTaGGAGGAAAATCGAGTGTGTCCAATTTCATCACTGATAAATCAG | + |
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Preference number: 5 (lower is better) Translates to: TVLRKSIHADCKYYQ*EENRVCPISSLINQ Trigger: CTGATTTATCAGTGATGAAATTGGACACACTCGATTTTCCTCCCACTGGTAATATTTGCAGTCAGCATGAATAGACTTTCTCAGTACAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670477.1 |
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| CDS GCA 90 bp | ACAGGGCTTATTGATCTTTTCTCATATTTAGGCTTTGTTTCTAGGTaGCCAATAGAAGCTACCAAAACTTTAATAGTTGCTAACTCCCAC | + |
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Preference number: 5 (lower is better) Translates to: TGLIDLFSYLGFVSR*PIEATKTLIVANSH Trigger: GTGGGAGTTAGCAACTATTAAAGTTTTGGTAGCTTCTATTGGGCACCTAGAAACAAAGCCTAAATATGAGAAAAGATCAATAAGCCCTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666633.1 |
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| CDS CCA 90 bp | ACTGTACTGAGAAAGTCTATTCATGCTGACTGCAAATATTACCAGTaGGAGGAAAATCGAGTGTGTCCAATTTCATCACTGATAAATATG | + |
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Preference number: 5 (lower is better) Translates to: TVLRKSIHADCKYYQ*EENRVCPISSLINM Trigger: CATATTTATCAGTGATGAAATTGGACACACTCGATTTTCCTCCCACTGGTAATATTTGCAGTCAGCATGAATAGACTTTCTCAGTACAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000452933.2 ENST00000662401.1 ENST00000666633.1 |
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| CDS TCA 72 bp | ATGAATGCCAGCTGGATTCCAGTCCACTCCCCAGACTaGATGATAAGGCTCTACCACCGGGAATGGATCATG | + |
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Preference number: 6 (lower is better) Translates to: MNASWIPVHSPD*MIRLYHREWIM Trigger: CATGATCCATTCCCGGTGGTAGAGCCTTATCATTCAGTCTGGGGAGTGGACTGGAATCCAGCTGGCATTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666633.1 |
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| CDS CCA 72 bp | CCAGGGGCTTTTCCATATTCCCAGCATGACTCAGCATaGGAAACTTCCACTCAGTGTAAGCATGCAGGGCAT | + |
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Preference number: 6 (lower is better) Translates to: PGAFPYSQHDSA*ETSTQCKHAGH Trigger: ATGCCCTGCATGCTTACACTGAGTGGAAGTTTCCCATGCTGAGTCATGCTGGGAATATGGAAAAGCCCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662574.1 |
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| CDS CAA 72 bp | AAGCTTCTCTCCTTAGTTGCAGATGCCACCTTCCCATaGTGTCCTCACACCATCTTGCCTCTGTGCTTTGGT | + |
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Preference number: 6 (lower is better) Translates to: KLLSLVADATFP*CPHTILPLCFG Trigger: ACCAAAGCACAGAGGCAAGATGGTGTGAGGACACAATGGGAAGGTGGCATCTGCAACTAAGGAGAGAAGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000452933.2 ENST00000662401.1 ENST00000662574.1 ENST00000665945.1 ENST00000670477.1 |
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| CDS GCA 72 bp | TTCAAAGCCACAATGGACAGTGTCCTCTTCTGTCATTaGAGCTACACCATCCAAACTCCCCAGATCCATCCA | + |
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Preference number: 6 (lower is better) Translates to: FKATMDSVLFCH*SYTIQTPQIHP Trigger: TGGATGGATCTGGGGAGTTTGGATGGTGTAGCTGCAATGACAGAAGAGGACACTGTCCATTGTGGCTTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666633.1 |
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| CDS CCA 72 bp | TCCAAAAGCCACCAGACACCAATGATACACCACAGATaGGTGTCCCTGAGAGTAGAATTAGAACTACTCCCC | + |
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Preference number: 6 (lower is better) Translates to: SKSHQTPMIHHR*VSLRVELELLP Trigger: GGGGAGTAGTTCTAATTCTACTCTCAGGGACACCCATCTGTGGTGTATCATTGGTGTCTGGTGGCTTTTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666633.1 |
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| CDS CAA 90 bp | GGGAAAATGCAGGAGTCCCCTTTGTACATCAATGTAGTTCTTTGGTaGCTCTTTGCCACTGGGAGCAGCTACAAGATGATGGAACTTCCA | + |
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Preference number: 6 (lower is better) Translates to: GKMQESPLYINVVLW*LFATGSSYKMMELP Trigger: TGGAAGTTCCATCATCTTGTAGCTGCTCCCAGTGGCAAAGAGCAACCAAAGAACTACATTGATGTACAAAGGGGACTCCTGCATTTTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665945.1 |
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| CDS TCA 72 bp | AAACTTCCACTCAGTGTAAGCATGCAGGGCATTTTGTaGGCAGAAAAGCCCTGCCAGCTTCTAAGCTTCATG | + |
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Preference number: 6 (lower is better) Translates to: KLPLSVSMQGIL*AEKPCQLLSFM Trigger: CATGAAGCTTAGAAGCTGGCAGGGCTTTTCTGCTCACAAAATGCCCTGCATGCTTACACTGAGTGGAAGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662574.1 |
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| CDS CCA 72 bp | ATGCAGGAGTCCCCTTTGTACATCAATGTAGTTCTTTaGTTGCTCTTTGCCACTGGGAGCAGCTACAAGATG | + |
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Preference number: 6 (lower is better) Translates to: MQESPLYINVVL*LLFATGSSYKM Trigger: CATCTTGTAGCTGCTCCCAGTGGCAAAGAGCAACCAAAGAACTACATTGATGTACAAAGGGGACTCCTGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665945.1 |
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| CDS CAA 72 bp | CAGGAGTCCCCTTTGTACATCAATGTAGTTCTTTGGTaGCTCTTTGCCACTGGGAGCAGCTACAAGATGATG | + |
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Preference number: 6 (lower is better) Translates to: QESPLYINVVLW*LFATGSSYKMM Trigger: CATCATCTTGTAGCTGCTCCCAGTGGCAAAGAGCAACCAAAGAACTACATTGATGTACAAAGGGGACTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665945.1 |
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| CDS CAA 90 bp | AACAGGGAAAATGCAGGAGTCCCCTTTGTACATCAATGTAGTTCTTaGGTTGCTCTTTGCCACTGGGAGCAGCTACAAGATGATGGAACT | + |
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Preference number: 6 (lower is better) Translates to: NRENAGVPFVHQCSS*VALCHWEQLQDDGT Trigger: AGTTCCATCATCTTGTAGCTGCTCCCAGTGGCAAAGAGCAACCAAAGAACTACATTGATGTACAAAGGGGACTCCTGCATTTTCCCTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000665945.1 |
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| CDS GCA 72 bp | ACATGTTGCTCTTCTCTCCTTGAAGCAAGTGCTGTTTaGCCATTTTCCTTACTCCAGTGCATCCATCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: TCCSSLLEASAV*PFSLLQCIHLP Trigger: TGGAAGATGGATGCACTGGAGTAAGGAAAATGGGCAAACAGCACTTGCTTCAAGGAGAGAAGAGCAACATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000452933.2 |
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| CDS GCA 72 bp | GCAAATTTGGTTTATCCAGAAGCTTCTCTCCTTAGTTaGAGATGCCACCTTCCCATTGTGTCCTCACACCAT | + |
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Preference number: 6 (lower is better) Translates to: ANLVYPEASLLS*RCHLPIVSSHH Trigger: ATGGTGTGAGGACACAATGGGAAGGTGGCATCTGCAACTAAGGAGAGAAGCTTCTGGATAAACCAAATTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000452933.2 ENST00000662401.1 ENST00000662574.1 ENST00000665945.1 ENST00000670477.1 |
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| CDS GCA 72 bp | CCCTTTGTACATCAATGTAGTTCTTTGGTTGCTCTTTaGCACTGGGAGCAGCTACAAGATGATGGAACTTCC | + |
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Preference number: 6 (lower is better) Translates to: PFVHQCSSLVAL*HWEQLQDDGTS Trigger: GGAAGTTCCATCATCTTGTAGCTGCTCCCAGTGGCAAAGAGCAACCAAAGAACTACATTGATGTACAAAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665945.1 |
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| CDS CAA 72 bp | AATGCAGGAGTCCCCTTTGTACATCAATGTAGTTCTTaGGTTGCTCTTTGCCACTGGGAGCAGCTACAAGAT | + |
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Preference number: 6 (lower is better) Translates to: NAGVPFVHQCSS*VALCHWEQLQD Trigger: ATCTTGTAGCTGCTCCCAGTGGCAAAGAGCAACCAAAGAACTACATTGATGTACAAAGGGGACTCCTGCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665945.1 |
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| CDS CAA 90 bp | CACTGTTCTAGAGACTGGATGTCCAAGGTTAAGAGGTCAGCAAATTaGGTTTATCCAGAAGCTTCTCTCCTTAGTTGCAGATGCCACCTT | + |
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Preference number: 6 (lower is better) Translates to: HCSRDWMSKVKRSAN*VYPEASLLSCRCHL Trigger: AAGGTGGCATCTGCAACTAAGGAGAGAAGCTTCTGGATAAACCAAATTTGCTGACCTCTTAACCTTGGACATCCAGTCTCTAGAACAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000452933.2 ENST00000662401.1 ENST00000662574.1 ENST00000665945.1 ENST00000670477.1 |
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| CDS GCA 72 bp | ACATGTTGCTCTTCTCTCCTTGAAGCAAGTGCTGTTTaGCCATTTTCCTTACTCCAGTGCCTGTCACATAAA | + |
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Preference number: 6 (lower is better) Translates to: TCCSSLLEASAV*PFSLLQCLSHK Trigger: TTTATGTGACAGGCACTGGAGTAAGGAAAATGGGCAAACAGCACTTGCTTCAAGGAGAGAAGAGCAACATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000666633.1 |
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| CDS CCA 72 bp | GTCAGTGCCCCTAAATCTTGCTTCTCAGTGTTAGTTTaGAGCCTGAGAAAGAATGGCAGCTTTGGAAAAGTA | + |
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Preference number: 6 (lower is better) Translates to: VSAPKSCFSVLV*SLRKNGSFGKV Trigger: TACTTTTCCAAAGCTGCCATTCTTTCTCAGGCTCCAAACTAACACTGAGAAGCAAGATTTAGGGGCACTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000666633.1 |
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| CDS CCA 72 bp | GAGACTGGATGTCCAAGGTTAAGAGGTCAGCAAATTTaGTTTATCCAGAAGCTTCTCTCCTTAGTTGCAGAT | + |
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Preference number: 6 (lower is better) Translates to: ETGCPRLRGQQI*FIQKLLSLVAD Trigger: ATCTGCAACTAAGGAGAGAAGCTTCTGGATAAACCAAATTTGCTGACCTCTTAACCTTGGACATCCAGTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000452933.2 ENST00000662401.1 ENST00000662574.1 ENST00000665945.1 ENST00000670477.1 |
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| CDS CAA 72 bp | AGAGACTGGATGTCCAAGGTTAAGAGGTCAGCAAATTaGGTTTATCCAGAAGCTTCTCTCCTTAGTTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: RDWMSKVKRSAN*VYPEASLLSCR Trigger: TCTGCAACTAAGGAGAGAAGCTTCTGGATAAACCAAATTTGCTGACCTCTTAACCTTGGACATCCAGTCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000452933.2 ENST00000662401.1 ENST00000662574.1 ENST00000665945.1 ENST00000670477.1 |
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| CDS CAA 72 bp | AAACCATTTAAACAATATAATGAGAGGACAAGAGATTaGGAGCCTCAAAGCCTGGGTTTGAGTCCCAGATCT | + |
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Preference number: 6 (lower is better) Translates to: KPFKQYNERTRD*EPQSLGLSPRS Trigger: AGATCTGGGACTCAAACCCAGGCTTTGAGGCTCCAAATCTCTTGTCCTCTCATTATATTGTTTAAATGGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000662574.1 ENST00000665945.1 |
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| CDS CAA 90 bp | TGGAATATAAAACCATTTAAACAATATAATGAGAGGACAAGAGATTaGGAGCCTCAAAGCCTGGGTTTGAGTCCCAGATCTATCACTTGC | + |
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Preference number: 6 (lower is better) Translates to: WNIKPFKQYNERTRD*EPQSLGLSPRSITC Trigger: GCAAGTGATAGATCTGGGACTCAAACCCAGGCTTTGAGGCTCCAAATCTCTTGTCCTCTCATTATATTGTTTAAATGGTTTTATATTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000662574.1 ENST00000665945.1 |
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| CDS TCA 72 bp | AATGTGGGCAATATTGATATTGTGCCTTCTCTGGGATaGAGCAGTGAAACACTTACATGTAGTTCTTTGGTT | + |
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Preference number: 6 (lower is better) Translates to: NVGNIDIVPSLG*SSETLTCSSLV Trigger: AACCAAAGAACTACATGTAAGTGTTTCACTGCTTCATCCCAGAGAAGGCACAATATCAATATTGCCCACATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670477.1 |
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| CDS GCA 72 bp | TTGAAAACTGTACTGAGAAAGTCTATTCATGCTGACTaGAAATATTACCAGTGGGAGGAAAATCGAGTGTGT | + |
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Preference number: 6 (lower is better) Translates to: LKTVLRKSIHAD*KYYQWEENRVC Trigger: ACACACTCGATTTTCCTCCCACTGGTAATATTTGCAGTCAGCATGAATAGACTTTCTCAGTACAGTTTTCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000452933.2 ENST00000662401.1 ENST00000666633.1 ENST00000670477.1 |
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| CDS GCA 72 bp | TCTTTTTGTGAACATCTTAATGCATTTCTGATAGTCTaGCAGGGCTGCCATAACAAAGTTGCAAAGACTATG | + |
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Preference number: 6 (lower is better) Translates to: SFCEHLNAFLIV*QGCHNKVAKTM Trigger: CATAGTCTTTGCAACTTTGTTATGGCAGCCCTGGCAGACTATCAGAAATGCATTAAGATGTTCACAAAAAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000662401.1 ENST00000662574.1 ENST00000665945.1 ENST00000670477.1 |
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| CDS CCA 72 bp | CATGAAATGTGGGCAATATTGATATTGTGCCTTCTCTaGGATGAAGCAGTGAAACACTTACATGTAGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: HEMWAILILCLL*DEAVKHLHVVL Trigger: AAGAACTACATGTAAGTGTTTCACTGCTTCATCCCAGAGAAGGCACAATATCAATATTGCCCACATTTCATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670477.1 |
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| CDS CAA 72 bp | CTAACCTTCTTGAGGCCCGTGAAAGTACATCCCTTATaGATCAGTAAATTTATTTGTATGTTATTGTTGCAG | + |
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Preference number: 6 (lower is better) Translates to: LTFLRPVKVHPL*ISKFICMLLLQ Trigger: CTGCAACAATAACATACAAATAAATTTACTGATCAATAAGGGATGTACTTTCACGGGCCTCAAGAAGGTTAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000452933.2 |
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| CDS CCA 72 bp | AATCATTCAAGACGTACTCATCTGTACTTAGTTCTTTaGCTCAACATTATGTTTGTGATTTATTCCTGTTGC | + |
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Preference number: 6 (lower is better) Translates to: NHSRRTHLYLVL*LNIMFVIYSCC Trigger: GCAACAGGAATAAATCACAAACATAATGTTGAGCCAAAGAACTAAGTACAGATGAGTACGTCTTGAATGATT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000662401.1 ENST00000662574.1 ENST00000665945.1 |
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| CDS CAA 72 bp | GAATCATTCAAGACGTACTCATCTGTACTTAGTTCTTaGGCTCAACATTATGTTTGTGATTTATTCCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: ESFKTYSSVLSS*AQHYVCDLFLL Trigger: CAACAGGAATAAATCACAAACATAATGTTGAGCCAAAGAACTAAGTACAGATGAGTACGTCTTGAATGATTC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000662401.1 ENST00000662574.1 ENST00000665945.1 |
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