Pregenerated sensors for LINC01060 (Homo sapiens)
Ensembl gene IDs: ENSG00000249378Ensembl transcript IDs: ENST00000503458.6, ENST00000503580.1, ENST00000510005.5, ENST00000510832.5, ENST00000512839.5, ENST00000513313.5, ENST00000626420.2, ENST00000626986.2, ENST00000629270.2, ENST00000629963.2, ENST00000655286.1, ENST00000656246.1, ENST00000657654.1, ENST00000657685.1, ENST00000659977.1, ENST00000662888.1, ENST00000663631.1, ENST00000664177.1, ENST00000664234.1, ENST00000666634.1, ENST00000666759.1, ENST00000667003.1, ENST00000667271.1, ENST00000667802.1, ENST00000667883.1
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCAGGGTGGGCCCAGCGTTACTTACACCAGAGTCCCACAGTCACCTaGACAAACGAGGCTTCACCCTCAGGCCCTCGGCTCCCAATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PGWAQRYLHQSPTVT*TNEASPSGPRLPIS Trigger: AGAGATTGGGAGCCGAGGGCCTGAGGGTGAAGCCTCGTTTGTGCAGGTGACTGTGGGACTCTGGTGTAAGTAACGCTGGGCCCACCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503580.1 |
||
| CDS TCA 90 bp | CTGATATCCGCTCCTCATGAAGCTACTCAACAGGCACAGGCTCAGTaGGGTTTCTGCAAGGAGCGGCCCTGGTGCGACAGCCACCGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LISAPHEATQQAQAQ*GFCKERPWCDSHRQ Trigger: CTGACGGTGGCTGTCGCACCAGGGCCGCTCCTTGCAGAAACCTCACTGAGCCTGTGCCTGTTGAGTAGCTTCATGAGGAGCGGATATCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503580.1 |
||
| CDS TCA 90 bp | TGCATTCAGCGCAATGTGAGGCCGGGAGACACACTTTCTTCTGAATaGGGTGGAGCCGGGCTGAGGAGCGTTGGCTCTCGCCTGATGGGA | + |
|
Preference number: 5 (lower is better) Translates to: CIQRNVRPGDTLSSE*GGAGLRSVGSRLMG Trigger: TCCCATCAGGCGAGAGCCAACGCTCCTCAGCCCGGCTCCACCTCATTCAGAAGAAAGTGTGTCTCCCGGCCTCACATTGCGCTGAATGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000510832.5 ENST00000626986.2 ENST00000657685.1 ENST00000667003.1 |
||
| CDS GCA 90 bp | TGTGGGCGCACGTGTTCTGGGCAGAAGCCCCGTGTGTCACTCTCTTaGCCGGGCTTTCTCTGCCTGATATCCGCTCCTCATGAAGCTACT | + |
|
Preference number: 5 (lower is better) Translates to: CGRTCSGQKPRVSLS*PGFLCLISAPHEAT Trigger: AGTAGCTTCATGAGGAGCGGATATCAGGCAGAGAAAGCCCGGGCAAGAGAGTGACACACGGGGCTTCTGCCCAGAACACGTGCGCCCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503580.1 |
||
| CDS TCA 90 bp | TCCTTGCATTCAGCGCAATGTGAGGCCGGGAGACACACTTTCTTCTaGATGAGGTGGAGCCGGGCTGAGGAGCGTTGGCTCTCGCCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SLHSAQCEAGRHTFF*MRWSRAEERWLSPD Trigger: ATCAGGCGAGAGCCAACGCTCCTCAGCCCGGCTCCACCTCATTCAGAAGAAAGTGTGTCTCCCGGCCTCACATTGCGCTGAATGCAAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000510832.5 ENST00000626986.2 ENST00000657685.1 ENST00000667003.1 |
||
| CDS GCA 90 bp | TCTGGGCAGAAGCCCCGTGTGTCACTCTCTTGCCCGGGCTTTCTCTaGCTGATATCCGCTCCTCATGAAGCTACTCAACAGGCACAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SGQKPRVSLSCPGFL*LISAPHEATQQAQA Trigger: AGCCTGTGCCTGTTGAGTAGCTTCATGAGGAGCGGATATCAGGCAGAGAAAGCCCGGGCAAGAGAGTGACACACGGGGCTTCTGCCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503580.1 |
||
| CDS GCA 90 bp | TGGCCGCAGGTTCTTCTTGACGTGTGGCAGCATCACTCCACCCCCTaGCTCCTTGTCATGTGGCGTTCTTCCCTCTGTGTCTGTATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: WPQVLLDVWQHHSTP*LLVMWRSSLCVCIC Trigger: ACAGATACAGACACAGAGGGAAGAACGCCACATGACAAGGAGGCAGGGGGTGGAGTGATGCTGCCACACGTCAAGAAGAACCTGCGGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000510832.5 ENST00000626986.2 ENST00000657685.1 |
||
| CDS GCA 90 bp | ATTCTGGAGGCTGGAAGCCCACCATCAGCGTTGTTGGCAAGGCGATaGCAGTCCGAGGCCTCCACGAGAGAATCCTTTCTTGCCTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ILEAGSPPSALLARR*QSEASTRESFLASS Trigger: AGAAGAGGCAAGAAAGGATTCTCTCGTGGAGGCCTCGGACTGGCATCGCCTTGCCAACAACGCTGATGGTGGGCTTCCAGCCTCCAGAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000510832.5 ENST00000626986.2 ENST00000657685.1 |
||
| CDS TCA 90 bp | GTCACTCTCTTGCCCGGGCTTTCTCTGCCTGATATCCGCTCCTCATaGAGCTACTCAACAGGCACAGGCTCAGTGAGGTTTCTGCAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VTLLPGLSLPDIRSS*SYSTGTGSVRFLQG Trigger: TCCTTGCAGAAACCTCACTGAGCCTGTGCCTGTTGAGTAGCTTCATGAGGAGCGGATATCAGGCAGAGAAAGCCCGGGCAAGAGAGTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503580.1 |
||
| CDS TCA 90 bp | AATCCTTTCTTGCCTCTTCTAACTCTGGTGGCCGCAGGTTCTTCTTaGCGTGTGGCAGCATCACTCCACCCCCTGCCTCCTTGTCATGTG | + |
|
Preference number: 5 (lower is better) Translates to: NPFLPLLTLVAAGSS*RVAASLHPLPPCHV Trigger: CACATGACAAGGAGGCAGGGGGTGGAGTGATGCTGCCACACGTCAAGAAGAACCTGCGGCCACCAGAGTTAGAAGAGGCAAGAAAGGATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000510832.5 ENST00000626986.2 ENST00000657685.1 |
||
| CDS TCA 90 bp | AAGGAAAGCCTGGTTTATCTCGGTATCCTTGCATTCAGCGCAATGTaGGGCCGGGAGACACACTTTCTTCTGAATGAGGTGGAGCCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: KESLVYLGILAFSAM*GRETHFLLNEVEPG Trigger: GCCCGGCTCCACCTCATTCAGAAGAAAGTGTGTCTCCCGGCCTCACATTGCGCTGAATGCAAGGATACCGAGATAAACCAGGCTTTCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000510832.5 ENST00000626986.2 ENST00000657685.1 ENST00000667003.1 |
||
| CDS TCA 90 bp | CTCGTGGTGCCCACTCCGCTGAGTGTCTTTCCAAAAGCAATTCACTaGGCTCATGGTACCTGTAAAACATCTCGTCCAGGGAGCCTTACC | + |
|
Preference number: 5 (lower is better) Translates to: LVVPTPLSVFPKAIH*AHGTCKTSRPGSLT Trigger: GGTAAGGCTCCCTGGACGAGATGTTTTACAGGTACCATGAGCTCAGTGAATTGCTTTTGGAAAGACACTCAGCGGAGTGGGCACCACGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000655286.1 ENST00000659977.1 ENST00000667883.1 |
||
| CDS TCA 90 bp | GACGAGCAGAAGCTGCTTCTCCTAACCTCGTGGTGCCCACTCCGCTaGGTGTCTTTCCAAAAGCAATTCACTGAGCTCATGGTACCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: DEQKLLLLTSWCPLR*VSFQKQFTELMVPV Trigger: TACAGGTACCATGAGCTCAGTGAATTGCTTTTGGAAAGACACTCAGCGGAGTGGGCACCACGAGGTTAGGAGAAGCAGCTTCTGCTCGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655286.1 ENST00000659977.1 ENST00000667883.1 |
||
| CDS GCA 90 bp | CTCATTGCGAAGAGAGAGATTTGGATATCCACCTTCCTGTTGACTTaGCCAGATGTCTATCACGGTGCCTTCCGTATCCCAGGAGGACGT | + |
|
Preference number: 5 (lower is better) Translates to: LIAKREIWISTFLLT*PDVYHGAFRIPGGR Trigger: ACGTCCTCCTGGGATACGGAAGGCACCGTGATAGACATCTGGGCAAGTCAACAGGAAGGTGGATATCCAAATCTCTCTCTTCGCAATGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000657685.1 ENST00000659977.1 ENST00000664177.1 |
||
| CDS TCA 90 bp | ATGGACTTCCAGAATGCCAATGTGGACAGGCTCCTTCCAGGACTGTaGATGTGCAGGAGTCCACTGTCACGGGGATATCATTCAGATAAC | + |
|
Preference number: 5 (lower is better) Translates to: MDFQNANVDRLLPGL*MCRSPLSRGYHSDN Trigger: GTTATCTGAATGATATCCCCGTGACAGTGGACTCCTGCACATTCACAGTCCTGGAAGGAGCCTGTCCACATTGGCATTCTGGAAGTCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000510832.5 ENST00000512839.5 ENST00000626420.2 ENST00000626986.2 ENST00000655286.1 ENST00000666759.1 ENST00000667271.1 ENST00000667802.1 |
||
| CDS TCA 90 bp | ATTCCCCAGGAGAGGAGGGAAATCTGTCAGGAAGACAGAGTCTTATaGTTTTGTCCATGGGTGTCCCAGTACATGTGCGATGCAGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: IPQERREICQEDRVL*FCPWVSQYMCDAGQ Trigger: CTGTCCTGCATCGCACATGTACTGGGACACCCATGGACAAAATCATAAGACTCTGTCTTCCTGACAGATTTCCCTCCTCTCCTGGGGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000510832.5 ENST00000626986.2 ENST00000657685.1 |
||
| CDS GCA 90 bp | TTCTCGGGGACTGCATATGCGTTTGTCTTTTATGGACTTCCAGAATaGCAATGTGGACAGGCTCCTTCCAGGACTGTGAATGTGCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: FSGTAYAFVFYGLPE*QCGQAPSRTVNVQE Trigger: CTCCTGCACATTCACAGTCCTGGAAGGAGCCTGTCCACATTGGCATTCTGGAAGTCCATAAAAGACAAACGCATATGCAGTCCCCGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000510832.5 ENST00000512839.5 ENST00000626420.2 ENST00000626986.2 ENST00000655286.1 ENST00000666759.1 ENST00000667271.1 ENST00000667802.1 |
||
| CDS TCA 90 bp | TCAGTCTGGCTTGGCTCAGTCATTACCAAGTCTGCAACTGTACTCTaGGCGAAGGAAAGCCTGGTTTATCTCGGTATCCTTGCATTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SVWLGSVITKSATVL*AKESLVYLGILAFS Trigger: GCTGAATGCAAGGATACCGAGATAAACCAGGCTTTCCTTCGCTCAGAGTACAGTTGCAGACTTGGTAATGACTGAGCCAAGCCAGACTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000510832.5 ENST00000626986.2 ENST00000657685.1 ENST00000667003.1 |
||
| CDS TCA 90 bp | TCAAGGCCAAGTTGCAGCCGGAACTCAAGCTCAGTGAACTGGGAGTaGGCTGCTTTTGACTTCAGCAACCTCTTATCAAAGAGTATGCGA | + |
|
Preference number: 5 (lower is better) Translates to: SRPSCSRNSSSVNWE*AAFDFSNLLSKSMR Trigger: TCGCATACTCTTTGATAAGAGGTTGCTGAAGTCAAAAGCAGCTCACTCCCAGTTCACTGAGCTTGAGTTCCGGCTGCAACTTGGCCTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664177.1 |
||
| CDS GCA 90 bp | AACTGTACTCTGAGCGAAGGAAAGCCTGGTTTATCTCGGTATCCTTaGATTCAGCGCAATGTGAGGCCGGGAGACACACTTTCTTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: NCTLSEGKPGLSRYP*IQRNVRPGDTLSSE Trigger: TTCAGAAGAAAGTGTGTCTCCCGGCCTCACATTGCGCTGAATGCAAGGATACCGAGATAAACCAGGCTTTCCTTCGCTCAGAGTACAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000510832.5 ENST00000626986.2 ENST00000657685.1 ENST00000667003.1 |
||
| CDS TCA 90 bp | GGAGGCTGCACTGAGTCATGGTCGCACCACACACTTCAACCTGCATaGCAGAGCAAGATCCTTATCAAAGAGTATGCGACACTTTATCTA | + |
|
Preference number: 5 (lower is better) Translates to: GGCTESWSHHTLQPA*QSKILIKEYATLYL Trigger: TAGATAAAGTGTCGCATACTCTTTGATAAGGATCTTGCTCTGTCATGCAGGTTGAAGTGTGTGGTGCGACCATGACTCAGTGCAGCCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656246.1 ENST00000663631.1 |
||
| CDS TCA 90 bp | TTTCAAAAATCTCAAGGCCAAGTTGCAGCCGGAACTCAAGCTCAGTaGACTGGGAGTGAGCTGCTTTTGACTTCAGCAACCTCTTATCAA | + |
|
Preference number: 5 (lower is better) Translates to: FQKSQGQVAAGTQAQ*TGSELLLTSATSYQ Trigger: TTGATAAGAGGTTGCTGAAGTCAAAAGCAGCTCACTCCCAGTTCACTGAGCTTGAGTTCCGGCTGCAACTTGGCCTTGAGATTTTTGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000664177.1 |
||
| CDS GCA 90 bp | TCCTGGGAGAGCATCCTGGCTTGTCCTACATCTTATCAAAGAGTATaGGACACTTTATCTAATGAGTGTGCTTCTAAGACATGTGTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SWESILACPTSYQRV*DTLSNECASKTCVP Trigger: GGGGACACATGTCTTAGAAGCACACTCATTAGATAAAGTGTCGCATACTCTTTGATAAGATGTAGGACAAGCCAGGATGCTCTCCCAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664234.1 |
||
| CDS GCA 90 bp | TGTCCATGGGTGTCCCAGTACATGTGCGATGCAGGACAGGCTTACTaGTTGAAAAATATTCAGCTAAAAGAGGGTCCTATACAACACAAA | + |
|
Preference number: 5 (lower is better) Translates to: CPWVSQYMCDAGQAY*LKNIQLKEGPIQHK Trigger: TTTGTGTTGTATAGGACCCTCTTTTAGCTGAATATTTTTCAAGCAGTAAGCCTGTCCTGCATCGCACATGTACTGGGACACCCATGGACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000510832.5 ENST00000626986.2 ENST00000657685.1 |
||
| CDS GCA 90 bp | CCTGTAAAACATCTCGTCCAGGGAGCCTTACCTTATCAAAGAGTATaGGACACTTTATCTAATGAGTGTGCTTCTAAGACATGTGTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: PVKHLVQGALPYQRV*DTLSNECASKTCVP Trigger: GGGGACACATGTCTTAGAAGCACACTCATTAGATAAAGTGTCGCATACTCTTTGATAAGGTAAGGCTCCCTGGACGAGATGTTTTACAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655286.1 ENST00000659977.1 ENST00000667883.1 |
||
| CDS GCA 90 bp | ACTGAGTCATGGTCGCACCACACACTTCAACCTTATCAAAGAGTATaGGACACTTTATCTAATGAGTGTGCTTCTAAGACATGTGTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: TESWSHHTLQPYQRV*DTLSNECASKTCVP Trigger: GGGGACACATGTCTTAGAAGCACACTCATTAGATAAAGTGTCGCATACTCTTTGATAAGGTTGAAGTGTGTGGTGCGACCATGACTCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657654.1 |
||
| CDS TCA 90 bp | ATACCTGCAATGACCCTATTTCCAAATAAAGGCCCTATTCGCAAATaGGAAACAGGGTTTAGGACTTTAACATATCTCGTGAGGGACATA | + |
|
Preference number: 5 (lower is better) Translates to: IPAMTLFPNKGPIRK*ETGFRTLTYLVRDI Trigger: TATGTCCCTCACGAGATATGTTAAAGTCCTAAACCCTGTTTCTCATTTGCGAATAGGGCCTTTATTTGGAAATAGGGTCATTGCAGGTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000510832.5 ENST00000626986.2 ENST00000657685.1 |
||
| CDS GCA 90 bp | CTTGAAAGAATCATAGCAGAGTCTCAGCAAATACTTAGCAGACACTaGCTTGGTCATTTTGATGTCCCAAGGGTAACTAATAACTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LERIIAESQQILSRH*LGHFDVPRVTNNCL Trigger: AAGACAGTTATTAGTTACCCTTGGGACATCAAAATGACCAAGGCAGTGTCTGCTAAGTATTTGCTGAGACTCTGCTATGATTCTTTCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000510832.5 ENST00000512839.5 ENST00000626420.2 ENST00000626986.2 ENST00000655286.1 ENST00000666759.1 ENST00000667271.1 ENST00000667802.1 |
||
| CDS CCA 72 bp | GATGGGAGGCCTAGTGCAGAGCCCGCCAGGCTGGTCTaGGGTAGCCTGTGTGGGACTACACAGGGGTGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: DGRPSAEPARLV*GSLCGTTQGCS Trigger: ACTACACCCCTGTGTAGTCCCACACAGGCTACCCCAGACCAGCCTGGCGGGCTCTGCACTAGGCCTCCCATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000510832.5 ENST00000626986.2 ENST00000657685.1 ENST00000667003.1 |
||
| CDS TCA 72 bp | CGCAATGTGAGGCCGGGAGACACACTTTCTTCTGAATaGGGTGGAGCCGGGCTGAGGAGCGTTGGCTCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: RNVRPGDTLSSE*GGAGLRSVGSR Trigger: GCGAGAGCCAACGCTCCTCAGCCCGGCTCCACCTCATTCAGAAGAAAGTGTGTCTCCCGGCCTCACATTGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000510832.5 ENST00000626986.2 ENST00000657685.1 ENST00000667003.1 |
||
| CDS CCA 72 bp | CAATTCTGGAGGCTGGAAGCCCACCATCAGCGTTGTTaGCAAGGCGATGCCAGTCCGAGGCCTCCACGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: QFWRLEAHHQRC*QGDASPRPPRE Trigger: CTCTCGTGGAGGCCTCGGACTGGCATCGCCTTGCCAACAACGCTGATGGTGGGCTTCCAGCCTCCAGAATTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000510832.5 ENST00000626986.2 ENST00000657685.1 |
||
| CDS TCA 72 bp | GCTCCTCATGAAGCTACTCAACAGGCACAGGCTCAGTaGGGTTTCTGCAAGGAGCGGCCCTGGTGCGACAGC | + |
|
Preference number: 6 (lower is better) Translates to: APHEATQQAQAQ*GFCKERPWCDS Trigger: GCTGTCGCACCAGGGCCGCTCCTTGCAGAAACCTCACTGAGCCTGTGCCTGTTGAGTAGCTTCATGAGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503580.1 |
||
| CDS TCA 72 bp | TCAGCGCAATGTGAGGCCGGGAGACACACTTTCTTCTaGATGAGGTGGAGCCGGGCTGAGGAGCGTTGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SAQCEAGRHTFF*MRWSRAEERWL Trigger: GAGCCAACGCTCCTCAGCCCGGCTCCACCTCATTCAGAAGAAAGTGTGTCTCCCGGCCTCACATTGCGCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000510832.5 ENST00000626986.2 ENST00000657685.1 ENST00000667003.1 |
||
| CDS CAA 72 bp | CTTGCCTCTTCTAACTCTGGTGGCCGCAGGTTCTTCTaGACGTGTGGCAGCATCACTCCACCCCCTGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LASSNSGGRRFF*TCGSITPPPAS Trigger: GGAGGCAGGGGGTGGAGTGATGCTGCCACACGTCAAGAAGAACCTGCGGCCACCAGAGTTAGAAGAGGCAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000510832.5 ENST00000626986.2 ENST00000657685.1 |
||
| CDS CAA 72 bp | ACAATTCTGGAGGCTGGAAGCCCACCATCAGCGTTGTaGGCAAGGCGATGCCAGTCCGAGGCCTCCACGAGA | + |
|
Preference number: 6 (lower is better) Translates to: TILEAGSPPSAL*ARRCQSEASTR Trigger: TCTCGTGGAGGCCTCGGACTGGCATCGCCTTGCCAACAACGCTGATGGTGGGCTTCCAGCCTCCAGAATTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000510832.5 ENST00000626986.2 ENST00000657685.1 |
||
| CDS TCA 72 bp | TTGCCTCTTCTAACTCTGGTGGCCGCAGGTTCTTCTTaGCGTGTGGCAGCATCACTCCACCCCCTGCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LPLLTLVAAGSS*RVAASLHPLPP Trigger: AGGAGGCAGGGGGTGGAGTGATGCTGCCACACGTCAAGAAGAACCTGCGGCCACCAGAGTTAGAAGAGGCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000510832.5 ENST00000626986.2 ENST00000657685.1 |
||
| CDS GCA 72 bp | ACGTGTTCTGGGCAGAAGCCCCGTGTGTCACTCTCTTaGCCGGGCTTTCTCTGCCTGATATCCGCTCCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: TCSGQKPRVSLS*PGFLCLISAPH Trigger: ATGAGGAGCGGATATCAGGCAGAGAAAGCCCGGGCAAGAGAGTGACACACGGGGCTTCTGCCCAGAACACGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503580.1 |
||
| CDS GCA 72 bp | GCTGGAAGCCCACCATCAGCGTTGTTGGCAAGGCGATaGCAGTCCGAGGCCTCCACGAGAGAATCCTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: AGSPPSALLARR*QSEASTRESFL Trigger: AAGAAAGGATTCTCTCGTGGAGGCCTCGGACTGGCATCGCCTTGCCAACAACGCTGATGGTGGGCTTCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000510832.5 ENST00000626986.2 ENST00000657685.1 |
||
| CDS GCA 72 bp | GTTCTTCTTGACGTGTGGCAGCATCACTCCACCCCCTaGCTCCTTGTCATGTGGCGTTCTTCCCTCTGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: VLLDVWQHHSTP*LLVMWRSSLCV Trigger: GACACAGAGGGAAGAACGCCACATGACAAGGAGGCAGGGGGTGGAGTGATGCTGCCACACGTCAAGAAGAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000510832.5 ENST00000626986.2 ENST00000657685.1 |
||
| CDS CAA 90 bp | CTTGGTCCATGTAATGCAAGGACAAGGCACAGAGCCATCCCCCAGTaGATAATGGGCGTGATCATTAGAGCGGGAGCAGCAGGTGGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: LGPCNARTRHRAIPQ*IMGVIIRAGAAGGG Trigger: ACCCCCACCTGCTGCTCCCGCTCTAATGATCACGCCCATTATCAACTGGGGGATGGCTCTGTGCCTTGTCCTTGCATTACATGGACCAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENST00000512839.5 ENST00000513313.5 ENST00000626420.2 ENST00000629270.2 |
||
| CDS CAA 72 bp | TTGACGTGTGGCAGCATCACTCCACCCCCTGCCTCCTaGTCATGTGGCGTTCTTCCCTCTGTGTCTGTATCT | + |
|
Preference number: 6 (lower is better) Translates to: LTCGSITPPPAS*SCGVLPSVSVS Trigger: AGATACAGACACAGAGGGAAGAACGCCACATGACAAGGAGGCAGGGGGTGGAGTGATGCTGCCACACGTCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000510832.5 ENST00000626986.2 ENST00000657685.1 |
||
| CDS CAA 72 bp | GATGCCAGTCCGAGGCCTCCACGAGAGAATCCTTTCTaGCCTCTTCTAACTCTGGTGGCCGCAGGTTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: DASPRPPRENPF*PLLTLVAAGSS Trigger: AGAAGAACCTGCGGCCACCAGAGTTAGAAGAGGCAAGAAAGGATTCTCTCGTGGAGGCCTCGGACTGGCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000510832.5 ENST00000626986.2 ENST00000657685.1 |
||
| CDS CAA 90 bp | GAATCCTTTCTTGCCTCTTCTAACTCTGGTGGCCGCAGGTTCTTCTaGACGTGTGGCAGCATCACTCCACCCCCTGCCTCCTTGTCATGT | + |
|
Preference number: 6 (lower is better) Translates to: ESFLASSNSGGRRFF*TCGSITPPPASLSC Trigger: ACATGACAAGGAGGCAGGGGGTGGAGTGATGCTGCCACACGTCAAGAAGAACCTGCGGCCACCAGAGTTAGAAGAGGCAAGAAAGGATTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000510832.5 ENST00000626986.2 ENST00000657685.1 |
||
| CDS CAA 90 bp | TATTGCCTTACAATTCTGGAGGCTGGAAGCCCACCATCAGCGTTGTaGGCAAGGCGATGCCAGTCCGAGGCCTCCACGAGAGAATCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: YCLTILEAGSPPSAL*ARRCQSEASTRESF Trigger: AAAGGATTCTCTCGTGGAGGCCTCGGACTGGCATCGCCTTGCCAACAACGCTGATGGTGGGCTTCCAGCCTCCAGAATTGTAAGGCAATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000510832.5 ENST00000626986.2 ENST00000657685.1 |
||
| CDS CAA 90 bp | ATTTATTGCCTTACAATTCTGGAGGCTGGAAGCCCACCATCAGCGTaGTTGGCAAGGCGATGCCAGTCCGAGGCCTCCACGAGAGAATCC | + |
|
Preference number: 6 (lower is better) Translates to: IYCLTILEAGSPPSA*LARRCQSEASTRES Trigger: GGATTCTCTCGTGGAGGCCTCGGACTGGCATCGCCTTGCCAACAACGCTGATGGTGGGCTTCCAGCCTCCAGAATTGTAAGGCAATAAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000510832.5 ENST00000626986.2 ENST00000657685.1 |
||
| CDS TCA 72 bp | TTGCCCGGGCTTTCTCTGCCTGATATCCGCTCCTCATaGAGCTACTCAACAGGCACAGGCTCAGTGAGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: LPGLSLPDIRSS*SYSTGTGSVRF Trigger: AAACCTCACTGAGCCTGTGCCTGTTGAGTAGCTTCATGAGGAGCGGATATCAGGCAGAGAAAGCCCGGGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503580.1 |
||
| CDS GCA 72 bp | CTGAGCGAAGGAAAGCCTGGTTTATCTCGGTATCCTTaGATTCAGCGCAATGTGAGGCCGGGAGACACACTT | + |
|
Preference number: 6 (lower is better) Translates to: LSEGKPGLSRYP*IQRNVRPGDTL Trigger: AAGTGTGTCTCCCGGCCTCACATTGCGCTGAATGCAAGGATACCGAGATAAACCAGGCTTTCCTTCGCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000510832.5 ENST00000626986.2 ENST00000657685.1 ENST00000667003.1 |
||
| CDS CAA 72 bp | TCTGAGCGAAGGAAAGCCTGGTTTATCTCGGTATCCTaGCATTCAGCGCAATGTGAGGCCGGGAGACACACT | + |
|
Preference number: 6 (lower is better) Translates to: SERRKAWFISVS*HSAQCEAGRHT Trigger: AGTGTGTCTCCCGGCCTCACATTGCGCTGAATGCAAGGATACCGAGATAAACCAGGCTTTCCTTCGCTCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000510832.5 ENST00000626986.2 ENST00000657685.1 ENST00000667003.1 |
||
| CDS CAA 72 bp | TGTAATGCAAGGACAAGGCACAGAGCCATCCCCCAGTaGATAATGGGCGTGATCATTAGAGCGGGAGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: CNARTRHRAIPQ*IMGVIIRAGAA Trigger: TGCTGCTCCCGCTCTAATGATCACGCCCATTATCAACTGGGGGATGGCTCTGTGCCTTGTCCTTGCATTACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000512839.5 ENST00000513313.5 ENST00000626420.2 ENST00000629270.2 |
||
| CDS CAA 72 bp | GCTGGGCATAGTGGTGTGCACTGCAGTCCCAGCTACTaGAAAGGCCTGATGGGAAGATCACTTGATCCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: AGHSGVHCSPSY*KGLMGRSLDPN Trigger: ATTGGGATCAAGTGATCTTCCCATCAGGCCTTTCAAGTAGCTGGGACTGCAGTGCACACCACTATGCCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000656246.1 ENST00000657654.1 ENST00000663631.1 |
||
| CDS CAA 90 bp | ACTCATTGCGAAGAGAGAGATTTGGATATCCACCTTCCTGTTGACTaGCCCAGATGTCTATCACGGTGCCTTCCGTATCCCAGGAGGACG | + |
|
Preference number: 6 (lower is better) Translates to: THCEERDLDIHLPVD*PRCLSRCLPYPRRT Trigger: CGTCCTCCTGGGATACGGAAGGCACCGTGATAGACATCTGGGCAAGTCAACAGGAAGGTGGATATCCAAATCTCTCTCTTCGCAATGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000657685.1 ENST00000659977.1 ENST00000664177.1 |
||
| CDS TCA 72 bp | AAGCTGCTTCTCCTAACCTCGTGGTGCCCACTCCGCTaGGTGTCTTTCCAAAAGCAATTCACTGAGCTCATG | + |
|
Preference number: 6 (lower is better) Translates to: KLLLLTSWCPLR*VSFQKQFTELM Trigger: CATGAGCTCAGTGAATTGCTTTTGGAAAGACACTCAGCGGAGTGGGCACCACGAGGTTAGGAGAAGCAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655286.1 ENST00000659977.1 ENST00000667883.1 |
||
| CDS CAA 90 bp | CCAGGAGAGGAGGGAAATCTGTCAGGAAGACAGAGTCTTATGATTTaGTCCATGGGTGTCCCAGTACATGTGCGATGCAGGACAGGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: PGEEGNLSGRQSLMI*SMGVPVHVRCRTGL Trigger: TAAGCCTGTCCTGCATCGCACATGTACTGGGACACCCATGGACAAAATCATAAGACTCTGTCTTCCTGACAGATTTCCCTCCTCTCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000510832.5 ENST00000626986.2 ENST00000657685.1 |
||
| CDS TCA 72 bp | CCCACTCCGCTGAGTGTCTTTCCAAAAGCAATTCACTaGGCTCATGGTACCTGTAAAACATCTCGTCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: PTPLSVFPKAIH*AHGTCKTSRPG Trigger: CCCTGGACGAGATGTTTTACAGGTACCATGAGCTCAGTGAATTGCTTTTGGAAAGACACTCAGCGGAGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000655286.1 ENST00000659977.1 ENST00000667883.1 |
||
| CDS CAA 72 bp | GAAGAGAGAGATTTGGATATCCACCTTCCTGTTGACTaGCCCAGATGTCTATCACGGTGCCTTCCGTATCCC | + |
|
Preference number: 6 (lower is better) Translates to: EERDLDIHLPVD*PRCLSRCLPYP Trigger: GGGATACGGAAGGCACCGTGATAGACATCTGGGCAAGTCAACAGGAAGGTGGATATCCAAATCTCTCTCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000503458.6 ENST00000655286.1 ENST00000656246.1 ENST00000657654.1 ENST00000657685.1 ENST00000659977.1 ENST00000662888.1 ENST00000664177.1 ENST00000666759.1 |
||
| CDS CAA 90 bp | TGGAAACTCATTGCGAAGAGAGAGATTTGGATATCCACCTTCCTGTaGACTTGCCCAGATGTCTATCACGGTGCCTTCCGTATCCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: WKLIAKREIWISTFL*TCPDVYHGAFRIPG Trigger: TCCTGGGATACGGAAGGCACCGTGATAGACATCTGGGCAAGTCAACAGGAAGGTGGATATCCAAATCTCTCTCTTCGCAATGAGTTTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000655286.1 ENST00000657654.1 ENST00000657685.1 ENST00000659977.1 ENST00000662888.1 ENST00000664177.1 ENST00000666759.1 |
||
| CDS TCA 72 bp | AGTTGCAGCCGGAACTCAAGCTCAGTGAACTGGGAGTaGGCTGCTTTTGACTTCAGCAACCTCTTATCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SCSRNSSSVNWE*AAFDFSNLLSK Trigger: CTTTGATAAGAGGTTGCTGAAGTCAAAAGCAGCTCACTCCCAGTTCACTGAGCTTGAGTTCCGGCTGCAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664177.1 |
||
| CDS GCA 72 bp | ACAGTCAGTCTGGCTTGGCTCAGTCATTACCAAGTCTaGAACTGTACTCTGAGCGAAGGAAAGCCTGGTTTA | + |
|
Preference number: 6 (lower is better) Translates to: TVSLAWLSHYQV*NCTLSEGKPGL Trigger: TAAACCAGGCTTTCCTTCGCTCAGAGTACAGTTGCAGACTTGGTAATGACTGAGCCAAGCCAGACTGACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000510832.5 ENST00000626986.2 ENST00000657685.1 ENST00000667003.1 |
||
| CDS GCA 72 bp | AAGAGAGAGATTTGGATATCCACCTTCCTGTTGACTTaGCCAGATGTCTATCACGGTGCCTTCCGTATCCCA | + |
|
Preference number: 6 (lower is better) Translates to: KREIWISTFLLT*PDVYHGAFRIP Trigger: TGGGATACGGAAGGCACCGTGATAGACATCTGGGCAAGTCAACAGGAAGGTGGATATCCAAATCTCTCTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000655286.1 ENST00000657654.1 ENST00000657685.1 ENST00000659977.1 ENST00000662888.1 ENST00000664177.1 ENST00000666759.1 |
||
| CDS CCA 72 bp | CCAAGTCTGCAACTGTACTCTGAGCGAAGGAAAGCCTaGTTTATCTCGGTATCCTTGCATTCAGCGCAATGT | + |
|
Preference number: 6 (lower is better) Translates to: PSLQLYSERRKA*FISVSLHSAQC Trigger: ACATTGCGCTGAATGCAAGGATACCGAGATAAACCAGGCTTTCCTTCGCTCAGAGTACAGTTGCAGACTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000510832.5 ENST00000626986.2 ENST00000657685.1 ENST00000667003.1 |
||
| CDS CAA 72 bp | ATTGCGAAGAGAGAGATTTGGATATCCACCTTCCTGTaGACTTGCCCAGATGTCTATCACGGTGCCTTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: IAKREIWISTFL*TCPDVYHGAFR Trigger: ACGGAAGGCACCGTGATAGACATCTGGGCAAGTCAACAGGAAGGTGGATATCCAAATCTCTCTCTTCGCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000503458.6 ENST00000655286.1 ENST00000656246.1 ENST00000657654.1 ENST00000657685.1 ENST00000659977.1 ENST00000662888.1 ENST00000664177.1 ENST00000666759.1 |
||
| CDS CAA 90 bp | AAACTGCATTCTTCAGTGTTACTCTCTGAGTCCTGTGAAGTGTTCTaGGTCCATGTAATGCAAGGACAAGGCACAGAGCCATCCCCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: KLHSSVLLSESCEVF*VHVMQGQGTEPSPS Trigger: ACTGGGGGATGGCTCTGTGCCTTGTCCTTGCATTACATGGACCAAGAACACTTCACAGGACTCAGAGAGTAACACTGAAGAATGCAGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000512839.5 ENST00000626420.2 |
||
| CDS CAA 90 bp | CCGTGCGGGCATTCATGCATATTTCCTCTTTTCATATCTTCAGTCTaGTGGAGTCTCAACAGGCTGCAGCTTCTCTCACCAGTTTCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: PCGHSCIFPLFISSV*WSLNRLQLLSPVSC Trigger: ACAAGAAACTGGTGAGAGAAGCTGCAGCCTGTTGAGACTCCACAAGACTGAAGATATGAAAAGAGGAAATATGCATGAATGCCCGCACGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000512839.5 ENST00000513313.5 ENST00000626420.2 ENST00000629270.2 |
||
| CDS TCA 72 bp | CTTGGCTCAGTCATTACCAAGTCTGCAACTGTACTCTaGGCGAAGGAAAGCCTGGTTTATCTCGGTATCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LGSVITKSATVL*AKESLVYLGIL Trigger: AAGGATACCGAGATAAACCAGGCTTTCCTTCGCTCAGAGTACAGTTGCAGACTTGGTAATGACTGAGCCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000510832.5 ENST00000626986.2 ENST00000657685.1 ENST00000667003.1 |
||
| CDS TCA 72 bp | GAGAGGAGGGAAATCTGTCAGGAAGACAGAGTCTTATaGTTTTGTCCATGGGTGTCCCAGTACATGTGCGAT | + |
|
Preference number: 6 (lower is better) Translates to: ERREICQEDRVL*FCPWVSQYMCD Trigger: ATCGCACATGTACTGGGACACCCATGGACAAAATCATAAGACTCTGTCTTCCTGACAGATTTCCCTCCTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000510832.5 ENST00000626986.2 ENST00000657685.1 |
||
| CDS TCA 72 bp | ACTGAGTCATGGTCGCACCACACACTTCAACCTGCATaGCAGAGCAAGATCCTTATCAAAGAGTATGCGACA | + |
|
Preference number: 6 (lower is better) Translates to: TESWSHHTLQPA*QSKILIKEYAT Trigger: TGTCGCATACTCTTTGATAAGGATCTTGCTCTGTCATGCAGGTTGAAGTGTGTGGTGCGACCATGACTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656246.1 ENST00000663631.1 |
||
| CDS CCA 72 bp | AACAACATGAATTTATTGCCTTACAATTCTGGAGGCTaGAAGCCCACCATCAGCGTTGTTGGCAAGGCGATG | + |
|
Preference number: 6 (lower is better) Translates to: NNMNLLPYNSGG*KPTISVVGKAM Trigger: CATCGCCTTGCCAACAACGCTGATGGTGGGCTTCCAGCCTCCAGAATTGTAAGGCAATAAATTCATGTTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000510832.5 ENST00000626986.2 ENST00000657685.1 |
||
| CDS CAA 72 bp | TCTTCAGTGTTACTCTCTGAGTCCTGTGAAGTGTTCTaGGTCCATGTAATGCAAGGACAAGGCACAGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SSVLLSESCEVF*VHVMQGQGTEP Trigger: TGGCTCTGTGCCTTGTCCTTGCATTACATGGACCAAGAACACTTCACAGGACTCAGAGAGTAACACTGAAGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000512839.5 ENST00000626420.2 |
||
| CDS CAA 90 bp | CATGCATGCCGGCACCACATAACAGAGTTTCCATCTAGTGCAGATTaGTTTACAACAATGCTTTCTCGGGGACTGCATATGCGTTTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: HACRHHITEFPSSAD*FTTMLSRGLHMRLS Trigger: AGACAAACGCATATGCAGTCCCCGAGAAAGCATTGTTGTAAACAAATCTGCACTAGATGGAAACTCTGTTATGTGGTGCCGGCATGCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000510832.5 ENST00000512839.5 ENST00000626420.2 ENST00000626986.2 ENST00000655286.1 ENST00000666759.1 ENST00000667271.1 ENST00000667802.1 |
||
| CDS TCA 72 bp | CTGGCCCAAAACTACTTTGATGAGAGAACAGATGGGTaGCAGCCTGGAGTTTCTTATCAAAGAGTATGCGAC | + |
|
Preference number: 6 (lower is better) Translates to: LAQNYFDERTDG*QPGVSYQRVCD Trigger: GTCGCATACTCTTTGATAAGAAACTCCAGGCTGTCACCCATCTGTTCTCTCATCAAAGTAGTTTTGGGCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000662888.1 ENST00000667802.1 |
||
| CDS TCA 72 bp | GAACTCAAGCTCAGTGAACTGGGAGTGAGCTGCTTTTaGCTTCAGCAACCTCTTATCAAAGAGTATGCGACA | + |
|
Preference number: 6 (lower is better) Translates to: ELKLSELGVSCF*LQQPLIKEYAT Trigger: TGTCGCATACTCTTTGATAAGAGGTTGCTGAAGTCAAAAGCAGCTCACTCCCAGTTCACTGAGCTTGAGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664177.1 |
||
| CDS GCA 72 bp | ACTGCATATGCGTTTGTCTTTTATGGACTTCCAGAATaGCAATGTGGACAGGCTCCTTCCAGGACTGTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: TAYAFVFYGLPE*QCGQAPSRTVN Trigger: ATTCACAGTCCTGGAAGGAGCCTGTCCACATTGGCATTCTGGAAGTCCATAAAAGACAAACGCATATGCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000510832.5 ENST00000512839.5 ENST00000626420.2 ENST00000626986.2 ENST00000655286.1 ENST00000666759.1 ENST00000667271.1 ENST00000667802.1 |
||
| CDS CAA 90 bp | CCATGGGTGTCCCAGTACATGTGCGATGCAGGACAGGCTTACTGCTaGAAAAATATTCAGCTAAAAGAGGGTCCTATACAACACAAAGTT | + |
|
Preference number: 6 (lower is better) Translates to: PWVSQYMCDAGQAYC*KNIQLKEGPIQHKV Trigger: AACTTTGTGTTGTATAGGACCCTCTTTTAGCTGAATATTTTTCAAGCAGTAAGCCTGTCCTGCATCGCACATGTACTGGGACACCCATGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000510832.5 ENST00000626986.2 ENST00000657685.1 |
||
| CDS CAA 90 bp | GGCTGCAGCTTCTCTCACCAGTTTCTTGTTCTAGGCAATTCTGTGTaGAGCTCCTCTGGGGCAGAACAAAAGAGTATTGAAAGTATTGTT | + |
|
Preference number: 6 (lower is better) Translates to: GCSFSHQFLVLGNSV*SSSGAEQKSIESIV Trigger: AACAATACTTTCAATACTCTTTTGTTCTGCCCCAGAGGAGCTCAACACAGAATTGCCTAGAACAAGAAACTGGTGAGAGAAGCTGCAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000512839.5 ENST00000513313.5 ENST00000626420.2 ENST00000629270.2 |
||
| CDS GCA 72 bp | ATGATTTTGTCCATGGGTGTCCCAGTACATGTGCGATaGAGGACAGGCTTACTGCTTGAAAAATATTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: MILSMGVPVHVR*RTGLLLEKYSA Trigger: AGCTGAATATTTTTCAAGCAGTAAGCCTGTCCTGCATCGCACATGTACTGGGACACCCATGGACAAAATCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000510832.5 ENST00000626986.2 ENST00000657685.1 |
||
| CDS CCA 72 bp | GGCTTAAAACAACATGAATTTATTGCCTTACAATTCTaGAGGCTGGAAGCCCACCATCAGCGTTGTTGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: GLKQHEFIALQF*RLEAHHQRCWQ Trigger: TTGCCAACAACGCTGATGGTGGGCTTCCAGCCTCCAGAATTGTAAGGCAATAAATTCATGTTGTTTTAAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000510832.5 ENST00000626986.2 ENST00000657685.1 |
||
| CDS CAA 72 bp | CGGCACCACATAACAGAGTTTCCATCTAGTGCAGATTaGTTTACAACAATGCTTTCTCGGGGACTGCATATG | + |
|
Preference number: 6 (lower is better) Translates to: RHHITEFPSSAD*FTTMLSRGLHM Trigger: CATATGCAGTCCCCGAGAAAGCATTGTTGTAAACAAATCTGCACTAGATGGAAACTCTGTTATGTGGTGCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000510832.5 ENST00000512839.5 ENST00000626420.2 ENST00000626986.2 ENST00000655286.1 ENST00000666759.1 ENST00000667271.1 ENST00000667802.1 |
||
| CDS GCA 72 bp | CATCTCGTCCAGGGAGCCTTACCTTATCAAAGAGTATaGGACACTTTATCTAATGAGTGTGCTTCTAAGACA | + |
|
Preference number: 6 (lower is better) Translates to: HLVQGALPYQRV*DTLSNECASKT Trigger: TGTCTTAGAAGCACACTCATTAGATAAAGTGTCGCATACTCTTTGATAAGGTAAGGCTCCCTGGACGAGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000655286.1 ENST00000659977.1 ENST00000667883.1 |
||
| CDS CAA 72 bp | TCCCAGTACATGTGCGATGCAGGACAGGCTTACTGCTaGAAAAATATTCAGCTAAAAGAGGGTCCTATACAA | + |
|
Preference number: 6 (lower is better) Translates to: SQYMCDAGQAYC*KNIQLKEGPIQ Trigger: TTGTATAGGACCCTCTTTTAGCTGAATATTTTTCAAGCAGTAAGCCTGTCCTGCATCGCACATGTACTGGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000510832.5 ENST00000626986.2 ENST00000657685.1 |
||
| CDS CAA 72 bp | TTCTCTCACCAGTTTCTTGTTCTAGGCAATTCTGTGTaGAGCTCCTCTGGGGCAGAACAAAAGAGTATTGAA | + |
|
Preference number: 6 (lower is better) Translates to: FSHQFLVLGNSV*SSSGAEQKSIE Trigger: TTCAATACTCTTTTGTTCTGCCCCAGAGGAGCTCAACACAGAATTGCCTAGAACAAGAAACTGGTGAGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000512839.5 ENST00000513313.5 ENST00000626420.2 ENST00000629270.2 |
||
| CDS GCA 72 bp | ATCATAGCAGAGTCTCAGCAAATACTTAGCAGACACTaGCTTGGTCATTTTGATGTCCCAAGGGTAACTAAT | + |
|
Preference number: 6 (lower is better) Translates to: IIAESQQILSRH*LGHFDVPRVTN Trigger: ATTAGTTACCCTTGGGACATCAAAATGACCAAGGCAGTGTCTGCTAAGTATTTGCTGAGACTCTGCTATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENST00000510832.5 ENST00000512839.5 ENST00000626420.2 ENST00000626986.2 ENST00000655286.1 ENST00000666759.1 ENST00000667271.1 ENST00000667802.1 |
||
| CDS GCA 72 bp | GTGCAGATTTGTTTACAACAATGCTTTCTCGGGGACTaGATATGCGTTTGTCTTTTATGGACTTCCAGAATG | + |
|
Preference number: 6 (lower is better) Translates to: VQICLQQCFLGD*ICVCLLWTSRM Trigger: CATTCTGGAAGTCCATAAAAGACAAACGCATATGCAGTCCCCGAGAAAGCATTGTTGTAAACAAATCTGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000510832.5 ENST00000512839.5 ENST00000626420.2 ENST00000626986.2 ENST00000655286.1 ENST00000666759.1 ENST00000667271.1 ENST00000667802.1 |
||
| CDS GCA 72 bp | TGGTCGCACCACACACTTCAACCTTATCAAAGAGTATaGGACACTTTATCTAATGAGTGTGCTTCTAAGACA | + |
|
Preference number: 6 (lower is better) Translates to: WSHHTLQPYQRV*DTLSNECASKT Trigger: TGTCTTAGAAGCACACTCATTAGATAAAGTGTCGCATACTCTTTGATAAGGTTGAAGTGTGTGGTGCGACCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657654.1 |
||
| CDS GCA 72 bp | GCTCCCAATCTCTTACAGGCAACTTATCAAAGAGTATaGGACACTTTATCTAATGAGTGTGCTTCTAAGACA | + |
|
Preference number: 6 (lower is better) Translates to: APNLLQATYQRV*DTLSNECASKT Trigger: TGTCTTAGAAGCACACTCATTAGATAAAGTGTCGCATACTCTTTGATAAGTTGCCTGTAAGAGATTGGGAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000503580.1 |
||
| CDS GCA 72 bp | CAGAGTTTCCATCTAGTGCAGATTTGTTTACAACAATaGTTTCTCGGGGACTGCATATGCGTTTGTCTTTTA | + |
|
Preference number: 6 (lower is better) Translates to: QSFHLVQICLQQ*FLGDCICVCLL Trigger: TAAAAGACAAACGCATATGCAGTCCCCGAGAAAGCATTGTTGTAAACAAATCTGCACTAGATGGAAACTCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENST00000510832.5 ENST00000512839.5 ENST00000626420.2 ENST00000626986.2 ENST00000655286.1 ENST00000666759.1 ENST00000667271.1 ENST00000667802.1 |
||
| CDS GCA 72 bp | ACCTGCATGACAGAGCAAGATCCTTATCAAAGAGTATaGGACACTTTATCTAATGAGTGTGCTTCTAAGACA | + |
|
Preference number: 6 (lower is better) Translates to: TCMTEQDPYQRV*DTLSNECASKT Trigger: TGTCTTAGAAGCACACTCATTAGATAAAGTGTCGCATACTCTTTGATAAGGATCTTGCTCTGTCATGCAGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000656246.1 ENST00000663631.1 |
||
| CDS GCA 72 bp | AGCATCCTGGCTTGTCCTACATCTTATCAAAGAGTATaGGACACTTTATCTAATGAGTGTGCTTCTAAGACA | + |
|
Preference number: 6 (lower is better) Translates to: SILACPTSYQRV*DTLSNECASKT Trigger: TGTCTTAGAAGCACACTCATTAGATAAAGTGTCGCATACTCTTTGATAAGATGTAGGACAAGCCAGGATGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000664234.1 |
||
| CDS CAA 72 bp | TTTTATTACTCTCTCCTCCATCTAACTGGAAACTCATaGCGAAGAGAGAGATTTGGATATCCACCTTCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: FYYSLLHLTGNS*RRERFGYPPSC Trigger: ACAGGAAGGTGGATATCCAAATCTCTCTCTTCGCAATGAGTTTCCAGTTAGATGGAGGAGAGAGTAATAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 20 transcripts: ENST00000503458.6 ENST00000510005.5 ENST00000510832.5 ENST00000626986.2 ENST00000629963.2 ENST00000655286.1 ENST00000656246.1 ENST00000657654.1 ENST00000657685.1 ENST00000659977.1 ENST00000662888.1 ENST00000663631.1 ENST00000664177.1 ENST00000664234.1 ENST00000666634.1 ENST00000666759.1 ENST00000667003.1 ENST00000667271.1 ENST00000667802.1 ENST00000667883.1 |
||
| CDS CAA 72 bp | ACTAAAATAATTCCGATACTACCTCTTTCTTTCATATaGTTAACCAGAAGGAGGAGAGTTGGACCTGAATGC | + |
|
Preference number: 6 (lower is better) Translates to: TKIIPILPLSFI*LTRRRRVGPEC Trigger: GCATTCAGGTCCAACTCTCCTCCTTCTGGTTAACAATATGAAAGAAAGAGGTAGTATCGGAATTATTTTAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000655286.1 ENST00000659977.1 ENST00000662888.1 ENST00000667802.1 ENST00000667883.1 |
||