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Pregenerated sensors for LINC01055 (Homo sapiens)

Ensembl gene IDs: ENSG00000235366

Ensembl transcript IDs: ENST00000435067.2

Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp GGAGTGGGCTGTCCAGCAGCCAAACTCCTCTCTGACCACCCTGGCTaGATTCCTCTCGAGTTCTCTCTGCTGCACTGTTCTGCATTGTCT +
Preference number: 5 (lower is better)
Translates to: GVGCPAAKLLSDHPG*IPLEFSLLHCSALS
Trigger: AGACAATGCAGAACAGTGCAGCAGAGAGAACTCGAGAGGAATTCAGCCAGGGTGGTCAGAGAGGAGTTTGGCTGCTGGACAGCCCACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435067.2
CDS TCA 90 bp ATGATCTTCCCTTGGAGTGGGCTGTCCAGCAGCCAAACTCCTCTCTaGCCACCCTGGCTGAATTCCTCTCGAGTTCTCTCTGCTGCACTG +
Preference number: 5 (lower is better)
Translates to: MIFPWSGLSSSQTPL*PPWLNSSRVLSAAL
Trigger: CAGTGCAGCAGAGAGAACTCGAGAGGAATTCAGCCAGGGTGGTCAGAGAGGAGTTTGGCTGCTGGACAGCCCACTCCAAGGGAAGATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435067.2
CDS GCA 90 bp CTGAATTCCTCTCGAGTTCTCTCTGCTGCACTGTTCTGCATTGTCTaGTTGTCTCGTCTCCTCCTCTGCTGGTCTGAGCTGGAGCCTGGG +
Preference number: 5 (lower is better)
Translates to: LNSSRVLSAALFCIV*LSRLLLCWSELEPG
Trigger: CCCAGGCTCCAGCTCAGACCAGCAGAGGAGGAGACGAGACAAGCAGACAATGCAGAACAGTGCAGCAGAGAGAACTCGAGAGGAATTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435067.2
CDS GCA 90 bp CCACCCTGGCTGAATTCCTCTCGAGTTCTCTCTGCTGCACTGTTCTaGATTGTCTGCTTGTCTCGTCTCCTCCTCTGCTGGTCTGAGCTG +
Preference number: 5 (lower is better)
Translates to: PPWLNSSRVLSAALF*IVCLSRLLLCWSEL
Trigger: CAGCTCAGACCAGCAGAGGAGGAGACGAGACAAGCAGACAATGCAGAACAGTGCAGCAGAGAGAACTCGAGAGGAATTCAGCCAGGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435067.2
CDS TCA 90 bp TCCCTCCTCTCAGGCCTGAGAAAACGACAGGACCATGAGGAAATCTaGTTTTCCTGCAGGTATGGGAATGGGAGAGGAAAGCATGAAGCC +
Preference number: 5 (lower is better)
Translates to: SLLSGLRKRQDHEEI*FSCRYGNGRGKHEA
Trigger: GGCTTCATGCTTTCCTCTCCCATTCCCATACCTGCAGGAAAATCAGATTTCCTCATGGTCCTGTCGTTTTCTCAGGCCTGAGAGGAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435067.2
CDS GCA 90 bp TCCAAATCATGTCTCATCCTCCTTCTATCTGACATTTGCAGGCTCTaGACTGGTTTGTTGGCAGTTCCCCCTAATTCCATGGAGGCCTTG +
Preference number: 5 (lower is better)
Translates to: SKSCLILLLSDICRL*TGLLAVPPNSMEAL
Trigger: CAAGGCCTCCATGGAATTAGGGGGAACTGCCAACAAACCAGTGCAGAGCCTGCAAATGTCAGATAGAAGGAGGATGAGACATGATTTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435067.2
CDS GCA 90 bp GGAAAAATATCCAAATCATGTCTCATCCTCCTTCTATCTGACATTTaGAGGCTCTGCACTGGTTTGTTGGCAGTTCCCCCTAATTCCATG +
Preference number: 5 (lower is better)
Translates to: GKISKSCLILLLSDI*RLCTGLLAVPPNSM
Trigger: CATGGAATTAGGGGGAACTGCCAACAAACCAGTGCAGAGCCTGCAAATGTCAGATAGAAGGAGGATGAGACATGATTTGGATATTTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000435067.2
CDS TCA 90 bp GGTGTTAAATTAATTTGCGGCGAGTACTGGCTAATGCATTTCAAATaGTTTAGCTCTGGTTGCTTCACTGAACATGTTCTGCAGTTTGGG +
Preference number: 5 (lower is better)
Translates to: GVKLICGEYWLMHFK*FSSGCFTEHVLQFG
Trigger: CCCAAACTGCAGAACATGTTCAGTGAAGCAACCAGAGCTAAATCATTTGAAATGCATTAGCCAGTACTCGCCGCAAATTAATTTAACACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435067.2
CDS CAA 72 bp GGCCACAGGTGTCCAGGCTTGTGGGTGGGGCCTTTGTaGGGGAACCGCCCTCTTCTAGCATTTCTCTGTCTC +
Preference number: 6 (lower is better)
Translates to: GHRCPGLWVGPL*GNRPLLAFLCL
Trigger: GAGACAGAGAAATGCTAGAAGAGGGCGGTTCCCCAACAAAGGCCCCACCCACAAGCCTGGACACCTGTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435067.2
CDS TCA 72 bp CCTTGGAGTGGGCTGTCCAGCAGCCAAACTCCTCTCTaGCCACCCTGGCTGAATTCCTCTCGAGTTCTCTCT +
Preference number: 6 (lower is better)
Translates to: PWSGLSSSQTPL*PPWLNSSRVLS
Trigger: AGAGAGAACTCGAGAGGAATTCAGCCAGGGTGGTCAGAGAGGAGTTTGGCTGCTGGACAGCCCACTCCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435067.2
CDS CAA 90 bp AATTCCTCTCGAGTTCTCTCTGCTGCACTGTTCTGCATTGTCTGCTaGTCTCGTCTCCTCCTCTGCTGGTCTGAGCTGGAGCCTGGGGTT +
Preference number: 6 (lower is better)
Translates to: NSSRVLSAALFCIVC*SRLLLCWSELEPGV
Trigger: AACCCCAGGCTCCAGCTCAGACCAGCAGAGGAGGAGACGAGACAAGCAGACAATGCAGAACAGTGCAGCAGAGAGAACTCGAGAGGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435067.2
CDS TCA 72 bp TGTCCAGCAGCCAAACTCCTCTCTGACCACCCTGGCTaGATTCCTCTCGAGTTCTCTCTGCTGCACTGTTCT +
Preference number: 6 (lower is better)
Translates to: CPAAKLLSDHPG*IPLEFSLLHCS
Trigger: AGAACAGTGCAGCAGAGAGAACTCGAGAGGAATTCAGCCAGGGTGGTCAGAGAGGAGTTTGGCTGCTGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435067.2
CDS GCA 72 bp TCTCGAGTTCTCTCTGCTGCACTGTTCTGCATTGTCTaGTTGTCTCGTCTCCTCCTCTGCTGGTCTGAGCTG +
Preference number: 6 (lower is better)
Translates to: SRVLSAALFCIV*LSRLLLCWSEL
Trigger: CAGCTCAGACCAGCAGAGGAGGAGACGAGACAAGCAGACAATGCAGAACAGTGCAGCAGAGAGAACTCGAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435067.2
CDS CCA 72 bp TCTGCTTGTCTCGTCTCCTCCTCTGCTGGTCTGAGCTaGAGCCTGGGGTTCAGGGTTTATATGGGTATAGGA +
Preference number: 6 (lower is better)
Translates to: SACLVSSSAGLS*SLGFRVYMGIG
Trigger: TCCTATACCCATATAAACCCTGAACCCCAGGCTCCAGCTCAGACCAGCAGAGGAGGAGACGAGACAAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435067.2
CDS TCA 72 bp GCCTTCTCTGTGCAGTGTGTGGTTAGTAGTAAATCTTaGGCCATTCAGCGCAGCGTTCCTCCTGGGGTCCAA +
Preference number: 6 (lower is better)
Translates to: AFSVQCVVSSKS*AIQRSVPPGVQ
Trigger: TTGGACCCCAGGAGGAACGCTGCGCTGAATGGCTCAAGATTTACTACTAACCACACACTGCACAGAGAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435067.2
CDS GCA 72 bp ACCACCCTGGCTGAATTCCTCTCGAGTTCTCTCTGCTaGACTGTTCTGCATTGTCTGCTTGTCTCGTCTCCT +
Preference number: 6 (lower is better)
Translates to: TTLAEFLSSSLC*TVLHCLLVSSP
Trigger: AGGAGACGAGACAAGCAGACAATGCAGAACAGTGCAGCAGAGAGAACTCGAGAGGAATTCAGCCAGGGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435067.2
CDS CAA 72 bp ATTCCTCTCGAGTTCTCTCTGCTGCACTGTTCTGCATaGTCTGCTTGTCTCGTCTCCTCCTCTGCTGGTCTG +
Preference number: 6 (lower is better)
Translates to: IPLEFSLLHCSA*SACLVSSSAGL
Trigger: CAGACCAGCAGAGGAGGAGACGAGACAAGCAGACAATGCAGAACAGTGCAGCAGAGAGAACTCGAGAGGAAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435067.2
CDS TCA 72 bp GTCCCTCCTCTCAGGCCTGAGAAAACGACAGGACCATaGGGAAATCTGATTTTCCTGCAGGTATGGGAATGG +
Preference number: 6 (lower is better)
Translates to: VPPLRPEKTTGP*GNLIFLQVWEW
Trigger: CCATTCCCATACCTGCAGGAAAATCAGATTTCCTCATGGTCCTGTCGTTTTCTCAGGCCTGAGAGGAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435067.2
CDS CAA 72 bp CTCCTTCTATCTGACATTTGCAGGCTCTGCACTGGTTaGTTGGCAGTTCCCCCTAATTCCATGGAGGCCTTG +
Preference number: 6 (lower is better)
Translates to: LLLSDICRLCTG*LAVPPNSMEAL
Trigger: CAAGGCCTCCATGGAATTAGGGGGAACTGCCAACAAACCAGTGCAGAGCCTGCAAATGTCAGATAGAAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435067.2
CDS CAA 72 bp CTTCTATCTGACATTTGCAGGCTCTGCACTGGTTTGTaGGCAGTTCCCCCTAATTCCATGGAGGCCTTGGTA +
Preference number: 6 (lower is better)
Translates to: LLSDICRLCTGL*AVPPNSMEALV
Trigger: TACCAAGGCCTCCATGGAATTAGGGGGAACTGCCAACAAACCAGTGCAGAGCCTGCAAATGTCAGATAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435067.2
CDS TCA 72 bp AAAAATATCCAAATCATGTCTCATCCTCCTTCTATCTaGCATTTGCAGGCTCTGCACTGGTTTGTTGGCAGT +
Preference number: 6 (lower is better)
Translates to: KNIQIMSHPPSI*HLQALHWFVGS
Trigger: ACTGCCAACAAACCAGTGCAGAGCCTGCAAATGTCAGATAGAAGGAGGATGAGACATGATTTGGATATTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000435067.2