Pregenerated sensors for LINC01053 (Homo sapiens)
Ensembl gene IDs: ENSG00000238169Ensembl transcript IDs: ENST00000457628.2, ENST00000656176.1
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCTCCTCCCAGGCTGGCCTCAGTTAGCCATCGTCGGGGAAGCCCGTaGGACCACATCCTGCAGTCCCAGCTTGCAGGACCTATACAGCCA | + |
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Preference number: 5 (lower is better) Translates to: APPRLASVSHRRGSP*DHILQSQLAGPIQP Trigger: TGGCTGTATAGGTCCTGCAAGCTGGGACTGCAGGATGTGGTCCCACGGGCTTCCCCGACGATGGCTAACTGAGGCCAGCCTGGGAGGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000457628.2 ENST00000656176.1 |
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| CDS GCA 90 bp | TGGCCTCAGTTAGCCATCGTCGGGGAAGCCCGTGGGACCACATCCTaGAGTCCCAGCTTGCAGGACCTATACAGCCACTTCAAACATTAT | + |
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Preference number: 5 (lower is better) Translates to: WPQLAIVGEARGTTS*SPSLQDLYSHFKHY Trigger: ATAATGTTTGAAGTGGCTGTATAGGTCCTGCAAGCTGGGACTGCAGGATGTGGTCCCACGGGCTTCCCCGACGATGGCTAACTGAGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000457628.2 ENST00000656176.1 |
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| CDS GCA 90 bp | CCATCGTCGGGGAAGCCCGTGGGACCACATCCTGCAGTCCCAGCTTaGAGGACCTATACAGCCACTTCAAACATTATTTCCAAGAGAGAC | + |
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Preference number: 5 (lower is better) Translates to: PSSGKPVGPHPAVPA*RTYTATSNIISKRD Trigger: GTCTCTCTTGGAAATAATGTTTGAAGTGGCTGTATAGGTCCTGCAAGCTGGGACTGCAGGATGTGGTCCCACGGGCTTCCCCGACGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000457628.2 ENST00000656176.1 |
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| CDS GCA 90 bp | GGGCCTGGTGCAACTGATGCCACATGCCATGAAGCAGTCCTGCTTTaGAGTCTGAATCATGCGTATGATCTGAGCTGGGGTTCTTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: GPGATDATCHEAVLL*SLNHAYDLSWGSFS Trigger: AGAGAAAGAACCCCAGCTCAGATCATACGCATGATTCAGACTGCAAAGCAGGACTGCTTCATGGCATGTGGCATCAGTTGCACCAGGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000457628.2 ENST00000656176.1 |
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| CDS CCA 90 bp | GAAGCAGTCCTGCTTTGCAGTCTGAATCATGCGTATGATCTGAGCTaGGGTTCTTTCTCTCCGTCCCTCTCTCTGCTCAGGTTCTACCAT | + |
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Preference number: 5 (lower is better) Translates to: EAVLLCSLNHAYDLS*GSFSPSLSLLRFYH Trigger: ATGGTAGAACCTGAGCAGAGAGAGGGACGGAGAGAAAGAACCCCAGCTCAGATCATACGCATGATTCAGACTGCAAAGCAGGACTGCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000457628.2 ENST00000656176.1 |
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| CDS TCA 90 bp | TGCCAGATGTACCTGCAAGCCCCTTGTCTGTTCTCAGAGAAGCTGTaGATAGCTGTTGTGCTTCTGAGACCTTGGAAAGATGTGTGCGTG | + |
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Preference number: 5 (lower is better) Translates to: CQMYLQAPCLFSEKL*IAVVLLRPWKDVCV Trigger: CACGCACACATCTTTCCAAGGTCTCAGAAGCACAACAGCTATTCACAGCTTCTCTGAGAACAGACAAGGGGCTTGCAGGTACATCTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000457628.2 ENST00000656176.1 |
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| CDS TCA 90 bp | GTGCTTCTGAGACCTTGGAAAGATGTGTGCGTGACCGCATGTCTATaGAATTTCAGAGATCCCGCTTCAGATGGAAATATTAGGAGCCCT | + |
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Preference number: 5 (lower is better) Translates to: VLLRPWKDVCVTACL*NFRDPASDGNIRSP Trigger: AGGGCTCCTAATATTTCCATCTGAAGCGGGATCTCTGAAATTTCATAGACATGCGGTCACGCACACATCTTTCCAAGGTCTCAGAAGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000457628.2 ENST00000656176.1 |
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| CDS CCA 90 bp | ATCATAATGTCCAGAAAAGTAGAGACAAGCAAGCTGGAGGTTATTTaGAACATTAGCAAGCCAGCTACGATGGCAGGGTGGCACCAAGTT | + |
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Preference number: 5 (lower is better) Translates to: IIMSRKVETSKLEVI*NISKPATMAGWHQV Trigger: AACTTGGTGCCACCCTGCCATCGTAGCTGGCTTGCTAATGTTCCAAATAACCTCCAGCTTGCTTGTCTCTACTTTTCTGGACATTATGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000457628.2 ENST00000656176.1 |
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| CDS TCA 90 bp | CAGGCTGAGGTCAAGAGTCATTGTGTTCTGTACACAATGCATACATaGTGGATTATTTACCAGGTGAGGGCCTCTTTATTTGTACCTCAT | + |
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Preference number: 5 (lower is better) Translates to: QAEVKSHCVLYTMHT*WIIYQVRASLFVPH Trigger: ATGAGGTACAAATAAAGAGGCCCTCACCTGGTAAATAATCCATCATGTATGCATTGTGTACAGAACACAATGACTCTTGACCTCAGCCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000457628.2 ENST00000656176.1 |
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| CDS TCA 90 bp | GACCTATACAGCCACTTCAAACATTATTTCCAAGAGAGACCCCATTaGCCTCTTCTGTTATTATTCAGACATATGTTAAGCTCTGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: DLYSHFKHYFQERPH*PLLLLFRHMLSSAA Trigger: TGCTGCAGAGCTTAACATATGTCTGAATAATAACAGAAGAGGTCAATGGGGTCTCTCTTGGAAATAATGTTTGAAGTGGCTGTATAGGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000457628.2 ENST00000656176.1 |
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| CDS TCA 90 bp | CTGAAGAATACGAAAATGTCCTCCAGCCTAAGATTCAAATATTGTTaGATGTCTTTGAGATCCTCAGCCAGGAAGACAAATGCTATTTAC | + |
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Preference number: 5 (lower is better) Translates to: LKNTKMSSSLRFKYC*MSLRSSARKTNAIY Trigger: GTAAATAGCATTTGTCTTCCTGGCTGAGGATCTCAAAGACATTCAACAATATTTGAATCTTAGGCTGGAGGACATTTTCGTATTCTTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000457628.2 ENST00000656176.1 |
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| CDS GCA 90 bp | CAAATATTGTTGAATGTCTTTGAGATCCTCAGCCAGGAAGACAAATaGTATTTACAGAGATCTGAAAGACTCATAATGCAGAACTATGGT | + |
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Preference number: 5 (lower is better) Translates to: QILLNVFEILSQEDK*YLQRSERLIMQNYG Trigger: ACCATAGTTCTGCATTATGAGTCTTTCAGATCTCTGTAAATAGCATTTGTCTTCCTGGCTGAGGATCTCAAAGACATTCAACAATATTTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000457628.2 ENST00000656176.1 |
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| CDS CAA 90 bp | GCCATCGTCGGGGAAGCCCGTGGGACCACATCCTGCAGTCCCAGCTaGCAGGACCTATACAGCCACTTCAAACATTATTTCCAAGAGAGA | + |
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Preference number: 6 (lower is better) Translates to: AIVGEARGTTSCSPS*QDLYSHFKHYFQER Trigger: TCTCTCTTGGAAATAATGTTTGAAGTGGCTGTATAGGTCCTGCAAGCTGGGACTGCAGGATGTGGTCCCACGGGCTTCCCCGACGATGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000457628.2 ENST00000656176.1 |
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| CDS GCA 72 bp | GGGAAGCCCGTGGGACCACATCCTGCAGTCCCAGCTTaGAGGACCTATACAGCCACTTCAAACATTATTTCC | + |
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Preference number: 6 (lower is better) Translates to: GKPVGPHPAVPA*RTYTATSNIIS Trigger: GGAAATAATGTTTGAAGTGGCTGTATAGGTCCTGCAAGCTGGGACTGCAGGATGTGGTCCCACGGGCTTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000457628.2 ENST00000656176.1 |
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| CDS CAA 72 bp | GGGGAAGCCCGTGGGACCACATCCTGCAGTCCCAGCTaGCAGGACCTATACAGCCACTTCAAACATTATTTC | + |
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Preference number: 6 (lower is better) Translates to: GEARGTTSCSPS*QDLYSHFKHYF Trigger: GAAATAATGTTTGAAGTGGCTGTATAGGTCCTGCAAGCTGGGACTGCAGGATGTGGTCCCACGGGCTTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000457628.2 ENST00000656176.1 |
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| CDS GCA 72 bp | TTAGCCCAGCATGGGCCTGGTGCAACTGATGCCACATaGCATGAAGCAGTCCTGCTTTGCAGTCTGAATCAT | + |
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Preference number: 6 (lower is better) Translates to: LAQHGPGATDAT*HEAVLLCSLNH Trigger: ATGATTCAGACTGCAAAGCAGGACTGCTTCATGGCATGTGGCATCAGTTGCACCAGGCCCATGCTGGGCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000457628.2 ENST00000656176.1 |
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| CDS GCA 72 bp | GCAACTGATGCCACATGCCATGAAGCAGTCCTGCTTTaGAGTCTGAATCATGCGTATGATCTGAGCTGGGGT | + |
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Preference number: 6 (lower is better) Translates to: ATDATCHEAVLL*SLNHAYDLSWG Trigger: ACCCCAGCTCAGATCATACGCATGATTCAGACTGCAAAGCAGGACTGCTTCATGGCATGTGGCATCAGTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000457628.2 ENST00000656176.1 |
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| CDS TCA 72 bp | TCAGATGGAAATATTAGGAGCCCTTCCCGGTCTTCATaGATTCACCTGTGTCAGCTGCAGAAAGGCAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: SDGNIRSPSRSS*IHLCQLQKGRS Trigger: TGACCTGCCTTTCTGCAGCTGACACAGGTGAATTCATGAAGACCGGGAAGGGCTCCTAATATTTCCATCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000457628.2 |
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| CDS CAA 72 bp | AGGGAGTTCCAAAGTAGATTTTTGCAGCTAAATTCTTaGGCCATGCAGGGTGAGCAGCTGTTGCCCAGACAC | + |
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Preference number: 6 (lower is better) Translates to: REFQSRFLQLNS*AMQGEQLLPRH Trigger: GTGTCTGGGCAACAGCTGCTCACCCTGCATGGCCAAAGAATTTAGCTGCAAAAATCTACTTTGGAACTCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000457628.2 ENST00000656176.1 |
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| CDS TCA 72 bp | TACCTGCAAGCCCCTTGTCTGTTCTCAGAGAAGCTGTaGATAGCTGTTGTGCTTCTGAGACCTTGGAAAGAT | + |
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Preference number: 6 (lower is better) Translates to: YLQAPCLFSEKL*IAVVLLRPWKD Trigger: ATCTTTCCAAGGTCTCAGAAGCACAACAGCTATTCACAGCTTCTCTGAGAACAGACAAGGGGCTTGCAGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000457628.2 ENST00000656176.1 |
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| CDS CAA 72 bp | AGAGAAGCTGTGAATAGCTGTTGTGCTTCTGAGACCTaGGAAAGATGTGTGCGTGACCGCATGTCTATGAAA | + |
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Preference number: 6 (lower is better) Translates to: REAVNSCCASET*ERCVRDRMSMK Trigger: TTTCATAGACATGCGGTCACGCACACATCTTTCCAAGGTCTCAGAAGCACAACAGCTATTCACAGCTTCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000457628.2 ENST00000656176.1 |
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| CDS CAA 90 bp | TCTGTTCTCAGAGAAGCTGTGAATAGCTGTTGTGCTTCTGAGACCTaGGAAAGATGTGTGCGTGACCGCATGTCTATGAAATTTCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: SVLREAVNSCCASET*ERCVRDRMSMKFQR Trigger: TCTCTGAAATTTCATAGACATGCGGTCACGCACACATCTTTCCAAGGTCTCAGAAGCACAACAGCTATTCACAGCTTCTCTGAGAACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000457628.2 ENST00000656176.1 |
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| CDS CAA 90 bp | AGTTTAATTAGGGAGTTCCAAAGTAGATTTTTGCAGCTAAATTCTTaGGCCATGCAGGGTGAGCAGCTGTTGCCCAGACACTATCCTCAA | + |
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Preference number: 6 (lower is better) Translates to: SLIREFQSRFLQLNS*AMQGEQLLPRHYPQ Trigger: TTGAGGATAGTGTCTGGGCAACAGCTGCTCACCCTGCATGGCCAAAGAATTTAGCTGCAAAAATCTACTTTGGAACTCCCTAATTAAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000457628.2 ENST00000656176.1 |
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| CDS TCA 72 bp | AGACCTTGGAAAGATGTGTGCGTGACCGCATGTCTATaGAATTTCAGAGATCCCGCTTCAGATGGAAATATT | + |
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Preference number: 6 (lower is better) Translates to: RPWKDVCVTACL*NFRDPASDGNI Trigger: AATATTTCCATCTGAAGCGGGATCTCTGAAATTTCATAGACATGCGGTCACGCACACATCTTTCCAAGGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000457628.2 ENST00000656176.1 |
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| CDS CAA 90 bp | GGACCTATACAGCCACTTCAAACATTATTTCCAAGAGAGACCCCATaGACCTCTTCTGTTATTATTCAGACATATGTTAAGCTCTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: GPIQPLQTLFPRETP*TSSVIIQTYVKLCS Trigger: GCTGCAGAGCTTAACATATGTCTGAATAATAACAGAAGAGGTCAATGGGGTCTCTCTTGGAAATAATGTTTGAAGTGGCTGTATAGGTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000457628.2 ENST00000656176.1 |
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| CDS CAA 90 bp | CTGACTGAAGAATACGAAAATGTCCTCCAGCCTAAGATTCAAATATaGTTGAATGTCTTTGAGATCCTCAGCCAGGAAGACAAATGCTAT | + |
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Preference number: 6 (lower is better) Translates to: LTEEYENVLQPKIQI*LNVFEILSQEDKCY Trigger: ATAGCATTTGTCTTCCTGGCTGAGGATCTCAAAGACATTCAACAATATTTGAATCTTAGGCTGGAGGACATTTTCGTATTCTTCAGTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000457628.2 ENST00000656176.1 |
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| CDS TCA 72 bp | ACGAAAATGTCCTCCAGCCTAAGATTCAAATATTGTTaGATGTCTTTGAGATCCTCAGCCAGGAAGACAAAT | + |
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Preference number: 6 (lower is better) Translates to: TKMSSSLRFKYC*MSLRSSARKTN Trigger: ATTTGTCTTCCTGGCTGAGGATCTCAAAGACATTCAACAATATTTGAATCTTAGGCTGGAGGACATTTTCGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000457628.2 ENST00000656176.1 |
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| CDS TCA 72 bp | GTCAAGAGTCATTGTGTTCTGTACACAATGCATACATaGTGGATTATTTACCAGGTGAGGGCCTCTTTATTT | + |
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Preference number: 6 (lower is better) Translates to: VKSHCVLYTMHT*WIIYQVRASLF Trigger: AAATAAAGAGGCCCTCACCTGGTAAATAATCCATCATGTATGCATTGTGTACAGAACACAATGACTCTTGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000457628.2 ENST00000656176.1 |
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| CDS GCA 72 bp | TTGAATGTCTTTGAGATCCTCAGCCAGGAAGACAAATaGTATTTACAGAGATCTGAAAGACTCATAATGCAG | + |
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Preference number: 6 (lower is better) Translates to: LNVFEILSQEDK*YLQRSERLIMQ Trigger: CTGCATTATGAGTCTTTCAGATCTCTGTAAATAGCATTTGTCTTCCTGGCTGAGGATCTCAAAGACATTCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000457628.2 ENST00000656176.1 |
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| CDS CAA 72 bp | TACGAAAATGTCCTCCAGCCTAAGATTCAAATATTGTaGAATGTCTTTGAGATCCTCAGCCAGGAAGACAAA | + |
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Preference number: 6 (lower is better) Translates to: YENVLQPKIQIL*NVFEILSQEDK Trigger: TTTGTCTTCCTGGCTGAGGATCTCAAAGACATTCAACAATATTTGAATCTTAGGCTGGAGGACATTTTCGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000457628.2 ENST00000656176.1 |
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| CDS TCA 72 bp | AGCCACTTCAAACATTATTTCCAAGAGAGACCCCATTaGCCTCTTCTGTTATTATTCAGACATATGTTAAGC | + |
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Preference number: 6 (lower is better) Translates to: SHFKHYFQERPH*PLLLLFRHMLS Trigger: GCTTAACATATGTCTGAATAATAACAGAAGAGGTCAATGGGGTCTCTCTTGGAAATAATGTTTGAAGTGGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000457628.2 ENST00000656176.1 |
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| CDS CAA 72 bp | CAGCCACTTCAAACATTATTTCCAAGAGAGACCCCATaGACCTCTTCTGTTATTATTCAGACATATGTTAAG | + |
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Preference number: 6 (lower is better) Translates to: QPLQTLFPRETP*TSSVIIQTYVK Trigger: CTTAACATATGTCTGAATAATAACAGAAGAGGTCAATGGGGTCTCTCTTGGAAATAATGTTTGAAGTGGCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000457628.2 ENST00000656176.1 |
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