Pregenerated sensors for LINC01052 (Homo sapiens)

Ensembl gene IDs: ENSG00000234767

Ensembl transcript IDs: ENST00000437777.2, ENST00000663858.1, ENST00000665754.1

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	GGATCCAACATCCATGGAATATATTGTAACAGTATGTTCAGACAGTaGCGTATTACCCAACAGTTAAAGATGAATCCAAGACTATGGTTG	+
Preference number: 5 (lower is better) Translates to: GSNIHGIYCNSMFRQ*RITQQLKMNPRLWL Trigger: CAACCATAGTCTTGGATTCATCTTTAACTGTTGGGTAATACGGCACTGTCTGAACATACTGTTACAATATATTCCATGGATGTTGGATCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665754.1
CDS TCA 90 bp	AAAGGTGTGAACTACTTCAAGGAAGTGCTAACTTCAGAGCCCAAATaGGAACATTTAAATGCTAAAATTTTTAGCAACAGCAAACAGATG	+
Preference number: 5 (lower is better) Translates to: KGVNYFKEVLTSEPK*EHLNAKIFSNSKQM Trigger: CATCTGTTTGCTGTTGCTAAAAATTTTAGCATTTAAATGTTCTCATTTGGGCTCTGAAGTTAGCACTTCCTTGAAGTAGTTCACACCTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000437777.2
CDS CAA 72 bp	AGCCCTTCAAGCAGCATTTCATCTGGTCTTCGTTGCTaGCCTGATGGAGTGATCCAGATCTTCATCTCTGAG	+
Preference number: 6 (lower is better) Translates to: SPSSSISSGLRC*PDGVIQIFISE Trigger: CTCAGAGATGAAGATCTGGATCACTCCATCAGGCAAGCAACGAAGACCAGATGAAATGCTGCTTGAAGGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000437777.2 ENST00000663858.1 ENST00000665754.1
CDS CAA 90 bp	AGATATGCCAGCCCTTCAAGCAGCATTTCATCTGGTCTTCGTTGCTaGCCTGATGGAGTGATCCAGATCTTCATCTCTGAGAAGTCCAAG	+
Preference number: 6 (lower is better) Translates to: RYASPSSSISSGLRC*PDGVIQIFISEKSK Trigger: CTTGGACTTCTCAGAGATGAAGATCTGGATCACTCCATCAGGCAAGCAACGAAGACCAGATGAAATGCTGCTTGAAGGGCTGGCATATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000437777.2 ENST00000663858.1 ENST00000665754.1
CDS CAA 72 bp	GTGATCCAGATCTTCATCTCTGAGAAGTCCAAGCCCTaGAGATCCTTAACCCTAACTTCAATTGCTCCAGCT	+
Preference number: 6 (lower is better) Translates to: VIQIFISEKSKP*RSLTLTSIAPA Trigger: AGCTGGAGCAATTGAAGTTAGGGTTAAGGATCTCAAGGGCTTGGACTTCTCAGAGATGAAGATCTGGATCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000437777.2 ENST00000663858.1
CDS GCA 72 bp	ATCCATGGAATATATTGTAACAGTATGTTCAGACAGTaGCGTATTACCCAACAGTTAAAGATGAATCCAAGA	+
Preference number: 6 (lower is better) Translates to: IHGIYCNSMFRQ*RITQQLKMNPR Trigger: TCTTGGATTCATCTTTAACTGTTGGGTAATACGGCACTGTCTGAACATACTGTTACAATATATTCCATGGAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000665754.1
CDS TCA 72 bp	AACTACTTCAAGGAAGTGCTAACTTCAGAGCCCAAATaGGAACATTTAAATGCTAAAATTTTTAGCAACAGC	+
Preference number: 6 (lower is better) Translates to: NYFKEVLTSEPK*EHLNAKIFSNS Trigger: GCTGTTGCTAAAAATTTTAGCATTTAAATGTTCTCATTTGGGCTCTGAAGTTAGCACTTCCTTGAAGTAGTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000437777.2

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