Pregenerated sensors for LINC01036 (Homo sapiens)
Ensembl gene IDs: ENSG00000230426Ensembl transcript IDs: ENST00000429725.1, ENST00000458683.1, ENST00000609113.2, ENST00000614505.1, ENST00000642737.1, ENST00000643044.1, ENST00000643891.1, ENST00000644419.1, ENST00000644648.1, ENST00000645691.1, ENST00000657376.1, ENST00000659970.1, ENST00000662036.1, ENST00000664099.1, ENST00000667049.1, ENST00000667298.1, ENST00000670356.1
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CATGGGCACATGGTAGAAAACGCCAGCCAGCCTTCTGCAGCGCCTTaGGCCATGTGTCCCAGCCCTGGCAGGGAGGGGACAGTGGCAGGG | + |
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Preference number: 5 (lower is better) Translates to: HGHMVENASQPSAAP*AMCPSPGREGTVAG Trigger: CCCTGCCACTGTCCCCTCCCTGCCAGGGCTGGGACACATGGCTCAAGGCGCTGCAGAAGGCTGGCTGGCGTTTTCTACCATGTGCCCATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000429725.1 ENST00000614505.1 ENST00000643044.1 ENST00000664099.1 |
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| CDS GCA 90 bp | GAGGAGATTCCATGGGCACATGGTAGAAAACGCCAGCCAGCCTTCTaGAGCGCCTTGAGCCATGTGTCCCAGCCCTGGCAGGGAGGGGAC | + |
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Preference number: 5 (lower is better) Translates to: EEIPWAHGRKRQPAF*SALSHVSQPWQGGD Trigger: GTCCCCTCCCTGCCAGGGCTGGGACACATGGCTCAAGGCGCTGCAGAAGGCTGGCTGGCGTTTTCTACCATGTGCCCATGGAATCTCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000429725.1 ENST00000614505.1 ENST00000643044.1 ENST00000664099.1 |
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| CDS GCA 90 bp | AAGTTTGAGACCAGCCCGGGCAACACAGCGAGATCCGTGAAGGTCTaGAGCTTCACTCCTGAGCCAGCGAGATCACGAACCCACCAGAAG | + |
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Preference number: 5 (lower is better) Translates to: KFETSPGNTARSVKV*SFTPEPARSRTHQK Trigger: CTTCTGGTGGGTTCGTGATCTCGCTGGCTCAGGAGTGAAGCTGCAGACCTTCACGGATCTCGCTGTGTTGCCCGGGCTGGTCTCAAACTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000609113.2 ENST00000645691.1 |
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| CDS TCA 90 bp | ACCAGGGGGAGAAGTGTAATTGCTGTGGGTTGGAGCTGGGCTCCCTaGCTGTGGGAGGAGATTCCATGGGCACATGGTAGAAAACGCCAG | + |
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Preference number: 5 (lower is better) Translates to: TRGRSVIAVGWSWAP*LWEEIPWAHGRKRQ Trigger: CTGGCGTTTTCTACCATGTGCCCATGGAATCTCCTCCCACAGTCAGGGAGCCCAGCTCCAACCCACAGCAATTACACTTCTCCCCCTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000429725.1 ENST00000614505.1 ENST00000643044.1 ENST00000664099.1 |
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| CDS CCA 90 bp | TCAGGCCCACTAGTCACACTGACCCAGAGGCTGCCTGTGTCCCTCTaGCTCAGCTCTGCTTTCACATTCATTCTCTCTCCACAACTTGGC | + |
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Preference number: 5 (lower is better) Translates to: SGPLVTLTQRLPVSL*LSSAFTFILSPQLG Trigger: GCCAAGTTGTGGAGAGAGAATGAATGTGAAAGCAGAGCTGAGCCAGAGGGACACAGGCAGCCTCTGGGTCAGTGTGACTAGTGGGCCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000657376.1 |
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| CDS GCA 90 bp | TTATTCTTATGCAAGTGTTTCCTTCACCAGGGGGAGAAGTGTAATTaGTGTGGGTTGGAGCTGGGCTCCCTGACTGTGGGAGGAGATTCC | + |
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Preference number: 5 (lower is better) Translates to: LFLCKCFLHQGEKCN*CGLELGSLTVGGDS Trigger: GGAATCTCCTCCCACAGTCAGGGAGCCCAGCTCCAACCCACAGCAATTACACTTCTCCCCCTGGTGAAGGAAACACTTGCATAAGAATAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000429725.1 ENST00000614505.1 ENST00000643044.1 ENST00000664099.1 |
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| CDS CCA 90 bp | CCTCTGGCTCAGCTCTGCTTTCACATTCATTCTCTCTCCACAACTTaGCTTTGCCCTCCTTTGTGCAGGCTTTATTTTCAGGCGGTCGCT | + |
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Preference number: 5 (lower is better) Translates to: PLAQLCFHIHSLSTT*LCPPLCRLYFQAVA Trigger: AGCGACCGCCTGAAAATAAAGCCTGCACAAAGGAGGGCAAAGCCAAGTTGTGGAGAGAGAATGAATGTGAAAGCAGAGCTGAGCCAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657376.1 |
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| CDS GCA 90 bp | GGTGACTTAGATATACTTCCTGATTTTACAATCTCCGTGAAGGTCTaGAGCTTCACTCCTGAGCCAGCGAGATCACGAACCCACCAGAAG | + |
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Preference number: 5 (lower is better) Translates to: GDLDILPDFTISVKV*SFTPEPARSRTHQK Trigger: CTTCTGGTGGGTTCGTGATCTCGCTGGCTCAGGAGTGAAGCTGCAGACCTTCACGGAGATTGTAAAATCAGGAAGTATATCTAAGTCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657376.1 |
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| CDS GCA 90 bp | GCTCAGCTCTGCTTTCACATTCATTCTCTCTCCACAACTTGGCTTTaGCCTCCTTTGTGCAGGCTTTATTTTCAGGCGGTCGCTCTTATT | + |
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Preference number: 5 (lower is better) Translates to: AQLCFHIHSLSTTWL*PPLCRLYFQAVALI Trigger: AATAAGAGCGACCGCCTGAAAATAAAGCCTGCACAAAGGAGGGCAAAGCCAAGTTGTGGAGAGAGAATGAATGTGAAAGCAGAGCTGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657376.1 |
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| CDS TCA 90 bp | AAGGAAACTGGTGTGAACATGAAGCTCATGCTACCTGCTGTGCCATaGGTAGCAAAGTTCTTTGTGTCTGATCCTGGAGTCCTGTGTCTT | + |
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Preference number: 5 (lower is better) Translates to: KETGVNMKLMLPAVP*VAKFFVSDPGVLCL Trigger: AAGACACAGGACTCCAGGATCAGACACAAAGAACTTTGCTACTCATGGCACAGCAGGTAGCATGAGCTTCATGTTCACACCAGTTTCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000644419.1 ENST00000644648.1 ENST00000667298.1 |
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| CDS TCA 90 bp | TTCATGATGTTTGGGCAGAAACGTCAGCAACAAGCAGCACTGATCTaGGCCACCATCATCAATCTTGGATACATATTCCTCCAAATCTTC | + |
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Preference number: 5 (lower is better) Translates to: FMMFGQKRQQQAALI*ATIINLGYIFLQIF Trigger: GAAGATTTGGAGGAATATGTATCCAAGATTGATGATGGTGGCTCAGATCAGTGCTGCTTGTTGCTGACGTTTCTGCCCAAACATCATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000643891.1 ENST00000657376.1 ENST00000667298.1 |
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| CDS GCA 90 bp | TCAAATCCTTGGGTGACAATCTTGTATCTCTTCATCACCAGGCCTTaGTCAAGTTTTGTTACAGGGGCATCAAGGACTATTGTTGACACA | + |
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Preference number: 5 (lower is better) Translates to: SNPWVTILYLFITRP*SSFVTGASRTIVDT Trigger: TGTGTCAACAATAGTCCTTGATGCCCCTGTAACAAAACTTGAGCAAGGCCTGGTGATGAAGAGATACAAGATTGTCACCCAAGGATTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000643044.1 ENST00000643891.1 ENST00000659970.1 ENST00000662036.1 |
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| CDS TCA 90 bp | AGAGACAAGAGGGTGACCTGGAATGTGCTGCTGATTTTATCTTCTTaGCCTGCATGGTGGTTATTTGAATTCATGATTTGTACACTGTCC | + |
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Preference number: 5 (lower is better) Translates to: RDKRVTWNVLLILSS*PAWWLFEFMICTLS Trigger: GGACAGTGTACAAATCATGAATTCAAATAACCACCATGCAGGTCAAGAAGATAAAATCAGCAGCACATTCCAGGTCACCCTCTTGTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458683.1 |
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| CDS TCA 90 bp | GCACAGGTCCAGAACTTTCTGCTTCACTATCCTCAAGGTCATCTGTaGTTTAGGTTGGATACCAGAACTCCAGGGTTTCTGTTTAAAAAT | + |
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Preference number: 5 (lower is better) Translates to: AQVQNFLLHYPQGHL*FRLDTRTPGFLFKN Trigger: ATTTTTAAACAGAAACCCTGGAGTTCTGGTATCCAACCTAAATCACAGATGACCTTGAGGATAGTGAAGCAGAAAGTTCTGGACCTGTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000643891.1 |
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| CDS GCA 90 bp | GAGCCTGAGTCTGATCCAGATCTTCCAATTCCAGAACACTTTCTTTaGACCAAACCACAGTCTCTCCTCATGAATCAATTTACATTTGTC | + |
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Preference number: 5 (lower is better) Translates to: EPESDPDLPIPEHFL*TKPQSLLMNQFTFV Trigger: GACAAATGTAAATTGATTCATGAGGAGAGACTGTGGTTTGGTGCAAAGAAAGTGTTCTGGAATTGGAAGATCTGGATCAGACTCAGGCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642737.1 |
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| CDS GCA 90 bp | ATTATTAAGCAGTTTCTATGTGGCTGGCACAGGTCCAGAACTTTCTaGTTCACTATCCTCAAGGTCATCTGTGATTTAGGTTGGATACCA | + |
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Preference number: 5 (lower is better) Translates to: IIKQFLCGWHRSRTF*FTILKVICDLGWIP Trigger: TGGTATCCAACCTAAATCACAGATGACCTTGAGGATAGTGAAGCAGAAAGTTCTGGACCTGTGCCAGCCACATAGAAACTGCTTAATAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643891.1 |
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| CDS CCA 90 bp | ACGTCAGCAACAAGCAGCACTGATCTGAGCCACCATCATCAATCTTaGATACATATTCCTCCAAATCTTCTTTCTTCTCTTCAGTCTGTT | + |
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Preference number: 5 (lower is better) Translates to: TSATSSTDLSHHHQS*IHIPPNLLSSLQSV Trigger: AACAGACTGAAGAGAAGAAAGAAGATTTGGAGGAATATGTATCCAAGATTGATGATGGTGGCTCAGATCAGTGCTGCTTGTTGCTGACGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000643891.1 ENST00000657376.1 ENST00000667298.1 |
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| CDS TCA 90 bp | CCAGGCAGAGTGTGTGCTTGCAAGAAGTTTGGGGAAGCAATAGCATaGACTGACATCAGTAACATTACAAGAATTTTCACAGGTAAAGAT | + |
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Preference number: 5 (lower is better) Translates to: PGRVCACKKFGEAIA*TDISNITRIFTGKD Trigger: ATCTTTACCTGTGAAAATTCTTGTAATGTTACTGATGTCAGTTCATGCTATTGCTTCCCCAAACTTCTTGCAAGCACACACTCTGCCTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000644419.1 ENST00000644648.1 ENST00000667298.1 |
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| CDS TCA 90 bp | GAATGTGCTGCTGATTTTATCTTCTTGACCTGCATGGTGGTTATTTaGATTCATGATTTGTACACTGTCCTTTTACTGGACAAGGTAGAG | + |
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Preference number: 5 (lower is better) Translates to: ECAADFIFLTCMVVI*IHDLYTVLLLDKVE Trigger: CTCTACCTTGTCCAGTAAAAGGACAGTGTACAAATCATGAATTCAAATAACCACCATGCAGGTCAAGAAGATAAAATCAGCAGCACATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000458683.1 |
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| CDS GCA 90 bp | ATTCCTCCAAATCTTCTTTCTTCTCTTCAGTCTGTTTTCAATAGCTaGCAGAATTATCCTTTTACTGGACAAGGTAGAGTTACGGCTACT | + |
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Preference number: 5 (lower is better) Translates to: IPPNLLSSLQSVFNS*QNYPFTGQGRVTAT Trigger: AGTAGCCGTAACTCTACCTTGTCCAGTAAAAGGATAATTCTGGCAGCTATTGAAAACAGACTGAAGAGAAGAAAGAAGATTTGGAGGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000643891.1 ENST00000657376.1 ENST00000667298.1 |
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| CDS CAA 90 bp | CCATGGGCACATGGTAGAAAACGCCAGCCAGCCTTCTGCAGCGCCTaGAGCCATGTGTCCCAGCCCTGGCAGGGAGGGGACAGTGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: PWAHGRKRQPAFCSA*SHVSQPWQGGDSGR Trigger: CCTGCCACTGTCCCCTCCCTGCCAGGGCTGGGACACATGGCTCAAGGCGCTGCAGAAGGCTGGCTGGCGTTTTCTACCATGTGCCCATGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000429725.1 ENST00000614505.1 ENST00000643044.1 ENST00000664099.1 |
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| CDS GCA 72 bp | CCATGGGCACATGGTAGAAAACGCCAGCCAGCCTTCTaGAGCGCCTTGAGCCATGTGTCCCAGCCCTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: PWAHGRKRQPAF*SALSHVSQPWQ Trigger: CTGCCAGGGCTGGGACACATGGCTCAAGGCGCTGCAGAAGGCTGGCTGGCGTTTTCTACCATGTGCCCATGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000429725.1 ENST00000614505.1 ENST00000643044.1 ENST00000664099.1 |
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| CDS GCA 72 bp | ACCAGCCCGGGCAACACAGCGAGATCCGTGAAGGTCTaGAGCTTCACTCCTGAGCCAGCGAGATCACGAACC | + |
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Preference number: 6 (lower is better) Translates to: TSPGNTARSVKV*SFTPEPARSRT Trigger: GGTTCGTGATCTCGCTGGCTCAGGAGTGAAGCTGCAGACCTTCACGGATCTCGCTGTGTTGCCCGGGCTGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000609113.2 ENST00000645691.1 |
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| CDS TCA 72 bp | CACAGCGAGATCCGTGAAGGTCTGCAGCTTCACTCCTaGGCCAGCGAGATCACGAACCCACCAGAAGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: HSEIREGLQLHS*ASEITNPPEGR Trigger: TCTTCCTTCTGGTGGGTTCGTGATCTCGCTGGCTCAGGAGTGAAGCTGCAGACCTTCACGGATCTCGCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000609113.2 ENST00000645691.1 |
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| CDS CAA 72 bp | AGTGGCAGGGAGCTGCTGATCCGTCCGCTTCTCCGCTaGAGCCCCCAAGTTGCACGTCAAAAATGTTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: SGRELLIRPLLR*SPQVARQKCCR Trigger: TCTGCAACATTTTTGACGTGCAACTTGGGGGCTCAAGCGGAGAAGCGGACGGATCAGCAGCTCCCTGCCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000429725.1 ENST00000643044.1 ENST00000664099.1 |
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| CDS TCA 72 bp | TGTAACACTCCCCGTGAAGGTCTGCAGCTTCACTCCTaGGCCAGCGAGATCACGAACCCACCAGAAGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: CNTPREGLQLHS*ASEITNPPEGR Trigger: TCTTCCTTCTGGTGGGTTCGTGATCTCGCTGGCTCAGGAGTGAAGCTGCAGACCTTCACGGGGAGTGTTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000609113.2 ENST00000643891.1 ENST00000657376.1 ENST00000670356.1 |
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| CDS TCA 72 bp | TGTAACACTCCCCCTGAAGGTCTGCAGCTTCACTCCTaGGCCAGCGAGATCACGAACCCACCAGAAGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: CNTPPEGLQLHS*ASEITNPPEGR Trigger: TCTTCCTTCTGGTGGGTTCGTGATCTCGCTGGCTCAGGAGTGAAGCTGCAGACCTTCAGGGGGAGTGTTACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000609113.2 ENST00000643891.1 ENST00000645691.1 ENST00000657376.1 ENST00000670356.1 |
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| CDS TCA 72 bp | AGAAGTGTAATTGCTGTGGGTTGGAGCTGGGCTCCCTaGCTGTGGGAGGAGATTCCATGGGCACATGGTAGA | + |
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Preference number: 6 (lower is better) Translates to: RSVIAVGWSWAP*LWEEIPWAHGR Trigger: TCTACCATGTGCCCATGGAATCTCCTCCCACAGTCAGGGAGCCCAGCTCCAACCCACAGCAATTACACTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000429725.1 ENST00000614505.1 ENST00000643044.1 ENST00000664099.1 |
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| CDS TCA 72 bp | TTTCATCTGACCCGTGAAGGTCTGCAGCTTCACTCCTaGGCCAGCGAGATCACGAACCCACCAGAAGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: FHLTREGLQLHS*ASEITNPPEGR Trigger: TCTTCCTTCTGGTGGGTTCGTGATCTCGCTGGCTCAGGAGTGAAGCTGCAGACCTTCACGGGTCAGATGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000643891.1 ENST00000670356.1 |
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| CDS CAA 90 bp | CCCTCTGGCTCAGCTCTGCTTTCACATTCATTCTCTCTCCACAACTaGGCTTTGCCCTCCTTTGTGCAGGCTTTATTTTCAGGCGGTCGC | + |
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Preference number: 6 (lower is better) Translates to: PSGSALLSHSFSLHN*ALPSFVQALFSGGR Trigger: GCGACCGCCTGAAAATAAAGCCTGCACAAAGGAGGGCAAAGCCAAGTTGTGGAGAGAGAATGAATGTGAAAGCAGAGCTGAGCCAGAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657376.1 |
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| CDS TCA 72 bp | TTTTACAATCTCCGTGAAGGTCTGCAGCTTCACTCCTaGGCCAGCGAGATCACGAACCCACCAGAAGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: FYNLREGLQLHS*ASEITNPPEGR Trigger: TCTTCCTTCTGGTGGGTTCGTGATCTCGCTGGCTCAGGAGTGAAGCTGCAGACCTTCACGGAGATTGTAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657376.1 |
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| CDS TCA 72 bp | AAGAAGGATGTATGGATCTCACTTTCATCTGACCCGTaGAGGTCTGCAGCTTCACTCCTGAGCCAGCGAGAT | + |
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Preference number: 6 (lower is better) Translates to: KKDVWISLSSDP*RSAASLLSQRD Trigger: ATCTCGCTGGCTCAGGAGTGAAGCTGCAGACCTTCACGGGTCAGATGAAAGTGAGATCCATACATCCTTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000643891.1 ENST00000670356.1 |
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| CDS TCA 72 bp | GTTGCTGAAGAAGGATGTATGGATCTCACTTTCATCTaGCCCGTGAAGGTCTGCAGCTTCACTCCTGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: VAEEGCMDLTFI*PVKVCSFTPEP Trigger: TGGCTCAGGAGTGAAGCTGCAGACCTTCACGGGTCAGATGAAAGTGAGATCCATACATCCTTCTTCAGCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000643891.1 ENST00000670356.1 |
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| CDS CCA 72 bp | GGCAGGACTGCTAAACAAAGTCCTGTCAAGCAGTTGTaGGCCATGTCCCCAGGATGTGTAAAACAAGATGGA | + |
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Preference number: 6 (lower is better) Translates to: GRTAKQSPVKQL*AMSPGCVKQDG Trigger: TCCATCTTGTTTTACACATCCTGGGGACATGGCCCACAACTGCTTGACAGGACTTTGTTTAGCAGTCCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000429725.1 ENST00000614505.1 ENST00000664099.1 |
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| CDS CAA 90 bp | GGCTCAGCTCTGCTTTCACATTCATTCTCTCTCCACAACTTGGCTTaGCCCTCCTTTGTGCAGGCTTTATTTTCAGGCGGTCGCTCTTAT | + |
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Preference number: 6 (lower is better) Translates to: GSALLSHSFSLHNLA*PSFVQALFSGGRSY Trigger: ATAAGAGCGACCGCCTGAAAATAAAGCCTGCACAAAGGAGGGCAAAGCCAAGTTGTGGAGAGAGAATGAATGTGAAAGCAGAGCTGAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657376.1 |
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| CDS TCA 72 bp | AACAGGCGCAGTGGTGTTAGACAGAAATCTTATTATTaGACAGCACAGTGGCGTGTGCCTATAGTCCCACCG | + |
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Preference number: 6 (lower is better) Translates to: NRRSGVRQKSYY*TAQWRVPIVPP Trigger: CGGTGGGACTATAGGCACACGCCACTGTGCTGTTCAATAATAAGATTTCTGTCTAACACCACTGCGCCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645691.1 |
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| CDS TCA 72 bp | ACCTGCTGTGCCATGAGTAGCAAAGTTCTTTGTGTCTaGTCCTGGAGTCCTGTGTCTTCTGCAGAATCTGTG | + |
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Preference number: 6 (lower is better) Translates to: TCCAMSSKVLCV*SWSPVSSAESV Trigger: CACAGATTCTGCAGAAGACACAGGACTCCAGGATCAGACACAAAGAACTTTGCTACTCATGGCACAGCAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000644419.1 ENST00000644648.1 ENST00000667298.1 |
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| CDS GCA 72 bp | CATTCTCTCTCCACAACTTGGCTTTGCCCTCCTTTGTaGAGGCTTTATTTTCAGGCGGTCGCTCTTATTGCA | + |
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Preference number: 6 (lower is better) Translates to: HSLSTTWLCPPL*RLYFQAVALIA Trigger: TGCAATAAGAGCGACCGCCTGAAAATAAAGCCTGCACAAAGGAGGGCAAAGCCAAGTTGTGGAGAGAGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657376.1 |
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| CDS CCA 72 bp | GTTGTGGGCCATGTCCCCAGGATGTGTAAAACAAGATaGAGGCTTACAGCACAAACCATACAGACACAGGAA | + |
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Preference number: 6 (lower is better) Translates to: VVGHVPRMCKTR*RLTAQTIQTQE Trigger: TTCCTGTGTCTGTATGGTTTGTGCTGTAAGCCTCCATCTTGTTTTACACATCCTGGGGACATGGCCCACAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000429725.1 ENST00000614505.1 ENST00000664099.1 |
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| CDS TCA 72 bp | ATAATCACATCCGTGAATAGCTGCCACACTCCAGCCTaGGCAACATATAGAGGTCCTGTCCCTTTTACTGGA | + |
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Preference number: 6 (lower is better) Translates to: IITSVNSCHTPA*ATYRGPVPFTG Trigger: TCCAGTAAAAGGGACAGGACCTCTATATGTTGCTCAGGCTGGAGTGTGGCAGCTATTCACGGATGTGATTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645691.1 |
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| CDS CCA 72 bp | AGCACAAACCATACAGACACAGGAAGCATACCAGATTaGCCACAGCCCAAGACTAGCCCTACAAATCCTTTT | + |
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Preference number: 6 (lower is better) Translates to: STNHTDTGSIPD*PQPKTSPTNPF Trigger: AAAAGGATTTGTAGGGCTAGTCTTGGGCTGTGGCCAATCTGGTATGCTTCCTGTGTCTGTATGGTTTGTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000429725.1 ENST00000614505.1 ENST00000664099.1 |
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| CDS CCA 72 bp | ACCTTCACAGCACGGCTTCAAAGGAGAAATAGGGAGTaGGGAGCCAGTGCTGTTATTGCTGTACATAAAACA | + |
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Preference number: 6 (lower is better) Translates to: TFTARLQRRNRE*GASAVIAVHKT Trigger: TGTTTTATGTACAGCAATAACAGCACTGGCTCCCCACTCCCTATTTCTCCTTTGAAGCCGTGCTGTGAAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645691.1 |
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| CDS CCA 72 bp | GACCTGTTCTGTCAGTTTTGGTCACTCTTGTGTCCCTaGAGCCTAGAATACAATCTTTTGGCCCATCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: DLFCQFWSLLCP*SLEYNLLAHQL Trigger: AAGCTGATGGGCCAAAAGATTGTATTCTAGGCTCCAGGGACACAAGAGTGACCAAAACTGACAGAACAGGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667049.1 |
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| CDS CAA 72 bp | CTGCTTTCACATTCATTCTCTCTCCACAACTTGGCTTaGCCCTCCTTTGTGCAGGCTTTATTTTCAGGCGGT | + |
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Preference number: 6 (lower is better) Translates to: LLSHSFSLHNLA*PSFVQALFSGG Trigger: ACCGCCTGAAAATAAAGCCTGCACAAAGGAGGGCAAAGCCAAGTTGTGGAGAGAGAATGAATGTGAAAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657376.1 |
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| CDS CAA 90 bp | CTCTGTATAGTCCTGAGCCAGAGCACATTGTTTAGTCAGAAGCTTTaGTACAGGACTCAATTATCTGGTGGTCCTGGGCATAGACTCATC | + |
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Preference number: 6 (lower is better) Translates to: LCIVLSQSTLFSQKL*YRTQLSGGPGHRLI Trigger: GATGAGTCTATGCCCAGGACCACCAGATAATTGAGTCCTGTACAAAAGCTTCTGACTAAACAATGTGCTCTGGCTCAGGACTATACAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000670356.1 |
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| CDS TCA 72 bp | AGCTTTGGAAACTGCACAAAGAGTAAATGGGGGAGGTaGGAGTCTGGGTGCAGAATCACAGTAAGACTATAC | + |
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Preference number: 6 (lower is better) Translates to: SFGNCTKSKWGR*ESGCRITVRLY Trigger: GTATAGTCTTACTGTGATTCTGCACCCAGACTCTCACCTCCCCCATTTACTCTTTGTGCAGTTTCCAAAGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000644419.1 ENST00000644648.1 ENST00000667298.1 |
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| CDS TCA 72 bp | ATTCAGCTAAAGACGGGGTTCTTTGTCCCATGGCCATaGAAATTCAGGCTGCCAAACAATTTGAACCGTGAG | + |
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Preference number: 6 (lower is better) Translates to: IQLKTGFFVPWP*KFRLPNNLNRE Trigger: CTCACGGTTCAAATTGTTTGGCAGCCTGAATTTTCATGGCCATGGGACAAAGAACCCCGTCTTTAGCTGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000643044.1 ENST00000662036.1 ENST00000664099.1 |
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| CDS TCA 72 bp | TTTGGGCAGAAACGTCAGCAACAAGCAGCACTGATCTaGGCCACCATCATCAATCTTGGATACATATTCCTC | + |
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Preference number: 6 (lower is better) Translates to: FGQKRQQQAALI*ATIINLGYIFL Trigger: GAGGAATATGTATCCAAGATTGATGATGGTGGCTCAGATCAGTGCTGCTTGTTGCTGACGTTTCTGCCCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000643891.1 ENST00000657376.1 ENST00000667298.1 |
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| CDS GCA 72 bp | CAGTTTCTATGTGGCTGGCACAGGTCCAGAACTTTCTaGTTCACTATCCTCAAGGTCATCTGTGATTTAGGT | + |
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Preference number: 6 (lower is better) Translates to: QFLCGWHRSRTF*FTILKVICDLG Trigger: ACCTAAATCACAGATGACCTTGAGGATAGTGAAGCAGAAAGTTCTGGACCTGTGCCAGCCACATAGAAACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643891.1 |
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| CDS CCA 72 bp | GCAGAGCAGAGGCACAAGTTGCTGAAGAAGGATGTATaGATCTCACTTTCATCTGACCCTTTGCTAGTGATT | + |
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Preference number: 6 (lower is better) Translates to: AEQRHKLLKKDV*ISLSSDPLLVI Trigger: AATCACTAGCAAAGGGTCAGATGAAAGTGAGATCCATACATCCTTCTTCAGCAACTTGTGCCTCTGCTCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642737.1 |
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| CDS CCA 72 bp | CAGCTCTGCTTTCACATTCATTCTCTCTCCACAACTTaGCTTTGCCCTCCTTTGTGCAGGCTTTATTTTCAG | + |
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Preference number: 6 (lower is better) Translates to: QLCFHIHSLSTT*LCPPLCRLYFQ Trigger: CTGAAAATAAAGCCTGCACAAAGGAGGGCAAAGCCAAGTTGTGGAGAGAGAATGAATGTGAAAGCAGAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657376.1 |
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| CDS CAA 72 bp | ATTCATTCTCTCTCCACAACTTGGCTTTGCCCTCCTTaGTGCAGGCTTTATTTTCAGGCGGTCGCTCTTATT | + |
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Preference number: 6 (lower is better) Translates to: IHSLSTTWLCPP*CRLYFQAVALI Trigger: AATAAGAGCGACCGCCTGAAAATAAAGCCTGCACAAAGGAGGGCAAAGCCAAGTTGTGGAGAGAGAATGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657376.1 |
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| CDS GCA 72 bp | TGGGTGACAATCTTGTATCTCTTCATCACCAGGCCTTaGTCAAGTTTTGTTACAGGGGCATCAAGGACTATT | + |
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Preference number: 6 (lower is better) Translates to: WVTILYLFITRP*SSFVTGASRTI Trigger: AATAGTCCTTGATGCCCCTGTAACAAAACTTGAGCAAGGCCTGGTGATGAAGAGATACAAGATTGTCACCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000643044.1 ENST00000643891.1 ENST00000659970.1 ENST00000662036.1 |
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| CDS CAA 72 bp | AAAGGAGAAATAGGGAGTGGGGAGCCAGTGCTGTTATaGCTGTACATAAAACAATCAGTCTGTTCTCTGACC | + |
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Preference number: 6 (lower is better) Translates to: KGEIGSGEPVLL*LYIKQSVCSLT Trigger: GGTCAGAGAACAGACTGATTGTTTTATGTACAGCAATAACAGCACTGGCTCCCCACTCCCTATTTCTCCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000645691.1 |
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| CDS CAA 72 bp | GCTTTGACCACAGGTGACTTTTTGATGCTGGGCTTTTaGTTTGATTATCAAGACGATAAGCCTCCTACACGG | + |
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Preference number: 6 (lower is better) Translates to: ALTTGDFLMLGF*FDYQDDKPPTR Trigger: CCGTGTAGGAGGCTTATCGTCTTGATAATCAAACAAAAAGCCCAGCATCAAAAAGTCACCTGTGGTCAAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000644419.1 ENST00000644648.1 ENST00000667298.1 |
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| CDS CAA 72 bp | TTGGGTGACAATCTTGTATCTCTTCATCACCAGGCCTaGCTCAAGTTTTGTTACAGGGGCATCAAGGACTAT | + |
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Preference number: 6 (lower is better) Translates to: LGDNLVSLHHQA*LKFCYRGIKDY Trigger: ATAGTCCTTGATGCCCCTGTAACAAAACTTGAGCAAGGCCTGGTGATGAAGAGATACAAGATTGTCACCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000643044.1 ENST00000643891.1 ENST00000659970.1 ENST00000662036.1 |
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| CDS CAA 72 bp | TCAGCTCTGCTTTCACATTCATTCTCTCTCCACAACTaGGCTTTGCCCTCCTTTGTGCAGGCTTTATTTTCA | + |
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Preference number: 6 (lower is better) Translates to: SALLSHSFSLHN*ALPSFVQALFS Trigger: TGAAAATAAAGCCTGCACAAAGGAGGGCAAAGCCAAGTTGTGGAGAGAGAATGAATGTGAAAGCAGAGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000657376.1 |
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| CDS CCA 72 bp | CAGATAGAGACGGTGTCTCCCGTCAGGGCAAAGACTTaGTGCTTTTGGTTGCATATACCTTATAAAAGATTT | + |
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Preference number: 6 (lower is better) Translates to: QIETVSPVRAKT*CFWLHIPYKRF Trigger: AAATCTTTTATAAGGTATATGCAACCAAAAGCACCAAGTCTTTGCCCTGACGGGAGACACCGTCTCTATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000644419.1 ENST00000644648.1 ENST00000667298.1 |
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| CDS CAA 72 bp | TCTTGTATCTCTTCATCACCAGGCCTTGCTCAAGTTTaGTTACAGGGGCATCAAGGACTATTGTTGACACAT | + |
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Preference number: 6 (lower is better) Translates to: SCISSSPGLAQV*LQGHQGLLLTH Trigger: ATGTGTCAACAATAGTCCTTGATGCCCCTGTAACAAAACTTGAGCAAGGCCTGGTGATGAAGAGATACAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000643044.1 ENST00000643891.1 ENST00000659970.1 ENST00000662036.1 |
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| CDS CAA 72 bp | TTTTGTGTGTGTGGGAATTTAGCCACTTCAGAGGACTaGTTCCCCATAATTGGAAGCTTTCCTTCGGATTTG | + |
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Preference number: 6 (lower is better) Translates to: FCVCGNLATSED*FPIIGSFPSDL Trigger: CAAATCCGAAGGAAAGCTTCCAATTATGGGGAACAAGTCCTCTGAAGTGGCTAAATTCCCACACACACAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670356.1 |
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| CDS GCA 72 bp | TGTCTCCCGTCAGGGCAAAGACTTGGTGCTTTTGGTTaGATATACCTTATAAAAGATTTGGGTTTCCAAAGA | + |
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Preference number: 6 (lower is better) Translates to: CLPSGQRLGAFG*IYLIKDLGFQR Trigger: TCTTTGGAAACCCAAATCTTTTATAAGGTATATGCAACCAAAAGCACCAAGTCTTTGCCCTGACGGGAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000644419.1 ENST00000644648.1 ENST00000667298.1 |
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| CDS CCA 72 bp | GAATTCCATACTGCAGGCCAGTTTCTGTCTGCAACCTaGAATCATCTAAAATTTCTGGAAGAATCAAGTGGA | + |
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Preference number: 6 (lower is better) Translates to: EFHTAGQFLSAT*NHLKFLEESSG Trigger: TCCACTTGATTCTTCCAGAAATTTTAGATGATTCCAGGTTGCAGACAGAAACTGGCCTGCAGTATGGAATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000644419.1 ENST00000644648.1 ENST00000667298.1 |
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| CDS CAA 72 bp | TACTTCTTCCAGTTCCTCTCATTCTCATCTAGTTCGTaGTTGTTTCTCTCTTGGGAAGTGGGGAAAACTTCT | + |
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Preference number: 6 (lower is better) Translates to: YFFQFLSFSSSS*LFLSWEVGKTS Trigger: AGAAGTTTTCCCCACTTCCCAAGAGAGAAACAACAACGAACTAGATGAGAATGAGAGGAACTGGAAGAAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667049.1 |
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| CDS CAA 72 bp | TCACTCTTGTGTCCCTGGAGCCTAGAATACAATCTTTaGGCCCATCAGCTTAAGAAAAATAGCTGTAACATC | + |
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Preference number: 6 (lower is better) Translates to: SLLCPWSLEYNL*AHQLKKNSCNI Trigger: GATGTTACAGCTATTTTTCTTAAGCTGATGGGCCAAAAGATTGTATTCTAGGCTCCAGGGACACAAGAGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000667049.1 |
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| CDS CAA 90 bp | TTATTGGGTGCTATCCATTCAGGGATTATGAGTGTTGCAGGCAGATaGTCTTCAAGGTGTATCTTGGTTGAAATAAACAGCACCAAGGAT | + |
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Preference number: 6 (lower is better) Translates to: LLGAIHSGIMSVAGR*SSRCILVEINSTKD Trigger: ATCCTTGGTGCTGTTTATTTCAACCAAGATACACCTTGAAGACAATCTGCCTGCAACACTCATAATCCCTGAATGGATAGCACCCAATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000644419.1 ENST00000644648.1 ENST00000667298.1 |
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| CDS TCA 72 bp | AGGGTGACCTGGAATGTGCTGCTGATTTTATCTTCTTaGCCTGCATGGTGGTTATTTGAATTCATGATTTGT | + |
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Preference number: 6 (lower is better) Translates to: RVTWNVLLILSS*PAWWLFEFMIC Trigger: ACAAATCATGAATTCAAATAACCACCATGCAGGTCAAGAAGATAAAATCAGCAGCACATTCCAGGTCACCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458683.1 |
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| CDS GCA 72 bp | TCTGATCCAGATCTTCCAATTCCAGAACACTTTCTTTaGACCAAACCACAGTCTCTCCTCATGAATCAATTT | + |
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Preference number: 6 (lower is better) Translates to: SDPDLPIPEHFL*TKPQSLLMNQF Trigger: AAATTGATTCATGAGGAGAGACTGTGGTTTGGTGCAAAGAAAGTGTTCTGGAATTGGAAGATCTGGATCAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642737.1 |
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| CDS CCA 72 bp | TTTTATCATCAATTTCCAGATATACTGAATGTCCTCTaGATCCCGGAACATACCATCCTCCTTCCTCATTCA | + |
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Preference number: 6 (lower is better) Translates to: FYHQFPDILNVL*IPEHTILLPHS Trigger: TGAATGAGGAAGGAGGATGGTATGTTCCGGGATCCAGAGGACATTCAGTATATCTGGAAATTGATGATAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644648.1 |
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| CDS CCA 72 bp | GAATTTAGCCACTTCAGAGGACTTGTTCCCCATAATTaGAAGCTTTCCTTCGGATTTGTTCAAGTCGAATAT | + |
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Preference number: 6 (lower is better) Translates to: EFSHFRGLVPHN*KLSFGFVQVEY Trigger: ATATTCGACTTGAACAAATCCGAAGGAAAGCTTCCAATTATGGGGAACAAGTCCTCTGAAGTGGCTAAATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000670356.1 |
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| CDS CAA 72 bp | GACATCTCTGTTCTATTTCATAGCTGTAACCTCACATaGCTTGGCTTGGTTGCTGTCTTCAAAATTGATGAC | + |
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Preference number: 6 (lower is better) Translates to: DISVLFHSCNLT*LGLVAVFKIDD Trigger: GTCATCAATTTTGAAGACAGCAACCAAGCCAAGCAATGTGAGGTTACAGCTATGAAATAGAACAGAGATGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000609113.2 |
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| CDS CAA 72 bp | TTCTTCCAGTTCCTCTCATTCTCATCTAGTTCGTTGTaGTTTCTCTCTTGGGAAGTGGGGAAAACTTCTATT | + |
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Preference number: 6 (lower is better) Translates to: FFQFLSFSSSSL*FLSWEVGKTSI Trigger: AATAGAAGTTTTCCCCACTTCCCAAGAGAGAAACAACAACGAACTAGATGAGAATGAGAGGAACTGGAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000644419.1 ENST00000667049.1 |
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| CDS CAA 72 bp | GTGTCTTTTCTCTGTATAGTCCTGAGCCAGAGCACATaGTTTAGTCAGAAGCTTTTGTACAGGACTCAATTA | + |
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Preference number: 6 (lower is better) Translates to: VSFLCIVLSQST*FSQKLLYRTQL Trigger: TAATTGAGTCCTGTACAAAAGCTTCTGACTAAACAATGTGCTCTGGCTCAGGACTATACAGAGAAAAGACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000670356.1 |
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| CDS CAA 90 bp | TTTGCCCTCCTTTGTGCAGGCTTTATTTTCAGGCGGTCGCTCTTATaGCAGGATAATGAAAATTCTGCATTGTATTTAGGTTTACACATT | + |
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Preference number: 6 (lower is better) Translates to: FALLCAGFIFRRSLL*QDNENSALYLGLHI Trigger: AATGTGTAAACCTAAATACAATGCAGAATTTTCATTATCCTGCAATAAGAGCGACCGCCTGAAAATAAAGCCTGCACAAAGGAGGGCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657376.1 |
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| CDS TCA 72 bp | ATTAACTTTCAACAGAGGTATAATCAAATCCTTGGGTaGCAATCTTGTATCTCTTCATCACCAGGCCTTGCT | + |
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Preference number: 6 (lower is better) Translates to: INFQQRYNQILG*QSCISSSPGLA Trigger: AGCAAGGCCTGGTGATGAAGAGATACAAGATTGTCACCCAAGGATTTGATTATACCTCTGTTGAAAGTTAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000643044.1 ENST00000643891.1 ENST00000659970.1 ENST00000662036.1 |
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| CDS CCA 72 bp | TGCTTCACTATCCTCAAGGTCATCTGTGATTTAGGTTaGATACCAGAACTCCAGGGTTTCTGTTTAAAAATA | + |
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Preference number: 6 (lower is better) Translates to: CFTILKVICDLG*IPELQGFCLKI Trigger: TATTTTTAAACAGAAACCCTGGAGTTCTGGTATCCAACCTAAATCACAGATGACCTTGAGGATAGTGAAGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000643891.1 |
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| CDS CAA 72 bp | TCCTTAGTATTTGCAGCTTTGACCACAGGTGACTTTTaGATGCTGGGCTTTTTGTTTGATTATCAAGACGAT | + |
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Preference number: 6 (lower is better) Translates to: SLVFAALTTGDF*MLGFLFDYQDD Trigger: ATCGTCTTGATAATCAAACAAAAAGCCCAGCATCAAAAAGTCACCTGTGGTCAAAGCTGCAAATACTAAGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000644419.1 ENST00000644648.1 ENST00000667298.1 |
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| CDS CAA 72 bp | CTTTGTGCAGGCTTTATTTTCAGGCGGTCGCTCTTATaGCAGGATAATGAAAATTCTGCATTGTATTTAGGT | + |
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Preference number: 6 (lower is better) Translates to: LCAGFIFRRSLL*QDNENSALYLG Trigger: ACCTAAATACAATGCAGAATTTTCATTATCCTGCAATAAGAGCGACCGCCTGAAAATAAAGCCTGCACAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000657376.1 |
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| CDS TCA 72 bp | GCTGATTTTATCTTCTTGACCTGCATGGTGGTTATTTaGATTCATGATTTGTACACTGTCCTTTTACTGGAC | + |
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Preference number: 6 (lower is better) Translates to: ADFIFLTCMVVI*IHDLYTVLLLD Trigger: GTCCAGTAAAAGGACAGTGTACAAATCATGAATTCAAATAACCACCATGCAGGTCAAGAAGATAAAATCAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000458683.1 |
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| CDS TCA 72 bp | ACGATCAACGTTTACACTTTGGCATTCAACATTAGTTaGAGTTGTCAAGAGATTGAACGTACAAATGGACAG | + |
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Preference number: 6 (lower is better) Translates to: TINVYTLAFNIS*SCQEIERTNGQ Trigger: CTGTCCATTTGTACGTTCAATCTCTTGACAACTTCAACTAATGTTGAATGCCAAAGTGTAAACGTTGATCGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642737.1 |
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| CDS CCA 72 bp | GAAAAATGTCCAAGGTACTTACAGTTAGAAACACGATaGAAAAAGAAGTTTGGTTGTCTCCGTGGTTTACAA | + |
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Preference number: 6 (lower is better) Translates to: EKCPRYLQLETR*KKKFGCLRGLQ Trigger: TTGTAAACCACGGAGACAACCAAACTTCTTTTTCCATCGTGTTTCTAACTGTAAGTACCTTGGACATTTTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000429725.1 ENST00000614505.1 |
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| CDS TCA 72 bp | AAGAATTCAAGCAATAGGGATTATCTTGTATTCGTTTaGTGGCAAAGTTCCATTCGTTTCCTATCATTAGGC | + |
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Preference number: 6 (lower is better) Translates to: KNSSNRDYLVFV*WQSSIRFLSLG Trigger: GCCTAATGATAGGAAACGAATGGAACTTTGCCATCAAACGAATACAAGATAATCCCTATTGCTTGAATTCTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667049.1 |
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| CDS TCA 72 bp | TATTTTGGCCTTACCTCTTTATGCATTACCTTCAGGTaGAAGAATGAATTCAATTTTAGTAACATTGCCACC | + |
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Preference number: 6 (lower is better) Translates to: YFGLTSLCITFR*KNEFNFSNIAT Trigger: GGTGGCAATGTTACTAAAATTGAATTCATTCTTTCACCTGAAGGTAATGCATAAAGAGGTAAGGCCAAAATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000667049.1 |
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| CDS GCA 72 bp | AGTATCAGCAATATTCCAAGCAAAAGTCAAAAAGTTTaGTTCAGCTTTCTGAGTTCAGTCCATTTAGTTAAC | + |
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Preference number: 6 (lower is better) Translates to: SISNIPSKSQKV*FSFLSSVHLVN Trigger: GTTAACTAAATGGACTGAACTCAGAAAGCTGAAGCAAACTTTTTGACTTTTGCTTGGAATATTGCTGATACT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000429725.1 ENST00000614505.1 |
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| CDS CAA 72 bp | CTTGGTGCTTTTGGTTGCATATACCTTATAAAAGATTaGGGTTTCCAAAGATCAGAATTCTTTGACTGTGAA | + |
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Preference number: 6 (lower is better) Translates to: LGAFGCIYLIKD*GFQRSEFFDCE Trigger: TTCACAGTCAAAGAATTCTGATCTTTGGAAACCCAAATCTTTTATAAGGTATATGCAACCAAAAGCACCAAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000644419.1 ENST00000644648.1 ENST00000667298.1 |
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