Pregenerated sensors for LINC01033 (Homo sapiens)
Ensembl gene IDs: ENSG00000249069Ensembl transcript IDs: ENST00000504609.3, ENST00000512618.5, ENST00000517934.1, ENST00000523194.7, ENST00000653566.1, ENST00000654906.1, ENST00000655801.1, ENST00000657274.1, ENST00000657771.1, ENST00000658828.1, ENST00000659703.1, ENST00000662022.1, ENST00000662351.1, ENST00000664079.1, ENST00000665795.1, ENST00000665869.1, ENST00000665899.1, ENST00000667636.1, ENST00000667992.1, ENST00000670528.1
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TGGCAGACCCAGCTTCCTCTGCTGCATCGCCTTGAACAGGCTTCTTaGTTCTGTAAAAGGCTGATGTGGGAGGCCCAGGAGATCGAGACT | + |
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Preference number: 5 (lower is better) Translates to: WQTQLPLLHRLEQAS*FCKRLMWEAQEIET Trigger: AGTCTCGATCTCCTGGGCCTCCCACATCAGCCTTTTACAGAATCAAGAAGCCTGTTCAAGGCGATGCAGCAGAGGAAGCTGGGTCTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000659703.1 ENST00000665795.1 |
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| CDS GCA 90 bp | CATGGCTACTGTCACATGGGCCTCTCCATAGGACTGCTCATTACATaGCAGAGGGCTGCCCCCAGAATGAGTGATAAGGCTGATGTGGGA | + |
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Preference number: 5 (lower is better) Translates to: HGYCHMGLSIGLLIT*QRAAPRMSDKADVG Trigger: TCCCACATCAGCCTTATCACTCATTCTGGGGGCAGCCCTCTGGCATGTAATGAGCAGTCCTATGGAGAGGCCCATGTGACAGTAGCCATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000523194.7 ENST00000657771.1 ENST00000662022.1 |
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| CDS TCA 90 bp | ATGAAATTTGGGACCCACAGATCTAAAGCGAGGTGTTCTGATGGCTaGAGGTACCACTGGGGAGGAGGTCCACTGCAGGGAAATCCCTCC | + |
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Preference number: 5 (lower is better) Translates to: MKFGTHRSKARCSDG*RYHWGGGPLQGNPS Trigger: GGAGGGATTTCCCTGCAGTGGACCTCCTCCCCAGTGGTACCTTCAGCCATCAGAACACCTCGCTTTAGATCTGTGGGTCCCAAATTTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000504609.3 ENST00000512618.5 ENST00000653566.1 ENST00000657274.1 ENST00000662351.1 ENST00000664079.1 ENST00000665795.1 ENST00000665869.1 ENST00000665899.1 ENST00000667636.1 |
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| CDS TCA 90 bp | GTTTGCTGTCAAGCTGTCAGCCAGGGCTGCAGTCTTCTAAAGGCTTaGCTGGAGCTGCAGGTTTCACTTCCAGTGTCACTCGCATGGCTA | + |
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Preference number: 5 (lower is better) Translates to: VCCQAVSQGCSLLKA*LELQVSLPVSLAWL Trigger: TAGCCATGCGAGTGACACTGGAAGTGAAACCTGCAGCTCCAGTCAAGCCTTTAGAAGACTGCAGCCCTGGCTGACAGCTTGACAGCAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000504609.3 ENST00000512618.5 ENST00000517934.1 ENST00000523194.7 ENST00000653566.1 ENST00000657771.1 ENST00000658828.1 ENST00000659703.1 ENST00000662022.1 ENST00000662351.1 ENST00000664079.1 ENST00000665869.1 ENST00000665899.1 ENST00000667636.1 ENST00000670528.1 |
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| CDS CCA 90 bp | TTTCTAGGGTCAGGGTCAGGGTCAGGAATCCAGGAGTGGCTTAGTTaGGTGGTTCTGCCTCCCGAGATTATCATCAAGCTGTCACCTAGG | + |
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Preference number: 5 (lower is better) Translates to: FLGSGSGSGIQEWLS*VVLPPEIIIKLSPR Trigger: CCTAGGTGACAGCTTGATGATAATCTCGGGAGGCAGAACCACCCAACTAAGCCACTCCTGGATTCCTGACCCTGACCCTGACCCTAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000523194.7 ENST00000657771.1 ENST00000658828.1 ENST00000659703.1 ENST00000667992.1 ENST00000670528.1 |
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| CDS CCA 90 bp | TCCCTCCTGGGGGAAAATTGCCACGAAAGAAGAGTTCCACATGGCTaGGAAGGCCTCACAATCATGGCGAAAGTCAAGGAGGAGAAAGTC | + |
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Preference number: 5 (lower is better) Translates to: SLLGENCHERRVPHG*EGLTIMAKVKEEKV Trigger: GACTTTCTCCTCCTTGACTTTCGCCATGATTGTGAGGCCTTCCCAGCCATGTGGAACTCTTCTTTCGTGGCAATTTTCCCCCAGGAGGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000512618.5 ENST00000657274.1 |
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| CDS CCA 90 bp | ATTACATGCCAGAGGGCTGCCCCCAGAATGAGTGATAGTTCCACATaGCTGGGAAGGCCTCACAATCATGGCGAAAGTCAAGGAGGAGAA | + |
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Preference number: 5 (lower is better) Translates to: ITCQRAAPRMSDSST*LGRPHNHGESQGGE Trigger: TTCTCCTCCTTGACTTTCGCCATGATTGTGAGGCCTTCCCAGCCATGTGGAACTATCACTCATTCTGGGGGCAGCCCTCTGGCATGTAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000658828.1 ENST00000670528.1 |
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| CDS CCA 90 bp | GCATGCAAAGCCAATCTTCAAACCCAGGTCCAACTCCACAGCCTGTaGTCTTCCCTCTCCACCAGGTTGCCACCAATTACTAAGGACATA | + |
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Preference number: 5 (lower is better) Translates to: ACKANLQTQVQLHSL*SSLSTRLPPITKDI Trigger: TATGTCCTTAGTAATTGGTGGCAACCTGGTGGAGAGGGAAGACCACAGGCTGTGGAGTTGGACCTGGGTTTGAAGATTGGCTTTGCATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000504609.3 ENST00000664079.1 |
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| CDS CCA 90 bp | GAAATCCCTCCTGGGGGAAAATTGCCACGAAAGAAGAGTTCCACATaGCTGGGAAGGCCTCACAATCATGGCGAAAGTCAAGGAGGAGAA | + |
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Preference number: 5 (lower is better) Translates to: EIPPGGKLPRKKSST*LGRPHNHGESQGGE Trigger: TTCTCCTCCTTGACTTTCGCCATGATTGTGAGGCCTTCCCAGCCATGTGGAACTCTTCTTTCGTGGCAATTTTCCCCCAGGAGGGATTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000512618.5 ENST00000657274.1 |
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| CDS CCA 90 bp | AAAGACTTGAGGTCATGTGCTTCACAGAATTCCAGAAGGCTGATGTaGGAGGCCCAGGAGATCGAGACTATAGTGAGCTGTGATCACACC | + |
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Preference number: 5 (lower is better) Translates to: KDLRSCASQNSRRLM*EAQEIETIVSCDHT Trigger: GGTGTGATCACAGCTCACTATAGTCTCGATCTCCTGGGCCTCCCACATCAGCCTTCTGGAATTCTGTGAAGCACATGACCTCAAGTCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654906.1 ENST00000655801.1 |
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| CDS TCA 90 bp | GGAGGGGAATTATACAAGGGTATGAATACCAGGAGGAGACAATCTTaGGGGCTGGCTACCATAGTCTGCCTTCTAGGCTCCAGTGAATCA | + |
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Preference number: 5 (lower is better) Translates to: GGELYKGMNTRRRQS*GLATIVCLLGSSES Trigger: TGATTCACTGGAGCCTAGAAGGCAGACTATGGTAGCCAGCCCTCAAGATTGTCTCCTCCTGGTATTCATACCCTTGTATAATTCCCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000657771.1 ENST00000658828.1 |
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| CDS TCA 90 bp | CTTGACTGGGGCTGGAGAATCTCCTCCCAAGCTTATTCACGTGATTaGCAACAGGTCTCAGGTCCTCATTACCTGAGATTCTCATTGCAT | + |
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Preference number: 5 (lower is better) Translates to: LDWGWRISSQAYSRD*QQVSGPHYLRFSLH Trigger: ATGCAATGAGAATCTCAGGTAATGAGGACCTGAGACCTGTTGTCAATCACGTGAATAAGCTTGGGAGGAGATTCTCCAGCCCCAGTCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000523194.7 ENST00000657771.1 ENST00000658828.1 ENST00000659703.1 ENST00000667992.1 ENST00000670528.1 |
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| CDS TCA 90 bp | TTCCATCTTTCCGGCATAAGCTGCGTTTCCATTTATCCAAAGACTTaGGGTCATGTGCTTCACAGAATTCCAGAGTTTTTGAGGACCAGG | + |
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Preference number: 5 (lower is better) Translates to: FHLSGISCVSIYPKT*GHVLHRIPEFLRTR Trigger: CCTGGTCCTCAAAAACTCTGGAATTCTGTGAAGCACATGACCTCAAGTCTTTGGATAAATGGAAACGCAGCTTATGCCGGAAAGATGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000504609.3 ENST00000653566.1 ENST00000662351.1 |
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| CDS GCA 90 bp | AAGACATGTCTTACATGGCGGCAGGCAAGAGAGAATGAGAGCTTGTaGAGGGAAATTCCTCCTAATAAAACCATCAGATCTCATGAGACT | + |
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Preference number: 5 (lower is better) Translates to: KTCLTWRQARENESL*REIPPNKTIRSHET Trigger: AGTCTCATGAGATCTGATGGTTTTATTAGGAGGAATTTCCCTGCACAAGCTCTCATTCTCTCTTGCCTGCCGCCATGTAAGACATGTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654906.1 ENST00000655801.1 |
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| CDS TCA 90 bp | CATTACCTGAGATTCTCATTGCATGGTGGTTGGCTTCCCTTTGAGTaGGTGATGAGAGATGGTAGCCACAATGTCTTTTATAACAAGGCT | + |
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Preference number: 5 (lower is better) Translates to: HYLRFSLHGGWLPFE*VMRDGSHNVFYNKA Trigger: AGCCTTGTTATAAAAGACATTGTGGCTACCATCTCTCATCACTCACTCAAAGGGAAGCCAACCACCATGCAATGAGAATCTCAGGTAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667992.1 |
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| CDS TCA 90 bp | CATTACCTGAGATTCTCATTGCATGGTGGTTGGCTTCCCTTTGAGTaGGTGATGAGAGATGGTAGCCACAATGTCTTTTATAACCTAATC | + |
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Preference number: 5 (lower is better) Translates to: HYLRFSLHGGWLPFE*VMRDGSHNVFYNLI Trigger: GATTAGGTTATAAAAGACATTGTGGCTACCATCTCTCATCACTCACTCAAAGGGAAGCCAACCACCATGCAATGAGAATCTCAGGTAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657771.1 ENST00000658828.1 |
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| CDS TCA 90 bp | CATTACCTGAGATTCTCATTGCATGGTGGTTGGCTTCCCTTTGAGTaGGTGATGAGAGATGGTAGCCACAATGTCTTTTATAACAGTTTT | + |
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Preference number: 5 (lower is better) Translates to: HYLRFSLHGGWLPFE*VMRDGSHNVFYNSF Trigger: AAAACTGTTATAAAAGACATTGTGGCTACCATCTCTCATCACTCACTCAAAGGGAAGCCAACCACCATGCAATGAGAATCTCAGGTAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000523194.7 ENST00000659703.1 ENST00000670528.1 |
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| CDS TCA 90 bp | GCCTTAAAAACTTTAGAGGGCCTTTGTGTGACCAAACTGGTACTCTaGGGCACCACTTTTGATCTTTCTGAGGTCATAACAAAGGATTTA | + |
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Preference number: 5 (lower is better) Translates to: ALKTLEGLCVTKLVL*GTTFDLSEVITKDL Trigger: TAAATCCTTTGTTATGACCTCAGAAAGATCAAAAGTGGTGCCTCAGAGTACCAGTTTGGTCACACAAAGGCCCTCTAAAGTTTTTAAGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000658828.1 |
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| CDS GCA 90 bp | CACACACCCCAAACACACAATGGTGGAACAGGAATAAACACTATATaGATTAATATTCAAAAAGGAAAGGTACTGGACACACTACTATGT | + |
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Preference number: 5 (lower is better) Translates to: HTPQTHNGGTGINTI*INIQKGKVLDTLLC Trigger: ACATAGTAGTGTGTCCAGTACCTTTCCTTTTTGAATATTAATGCATATAGTGTTTATTCCTGTTCCACCATTGTGTGTTTGGGGTGTGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000657771.1 ENST00000658828.1 |
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| CDS TCA 72 bp | GGGACCCACAGATCTAAAGCGAGGTGTTCTGATGGCTaGAGGTACCACTGGGGAGGAGGTCCACTGCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: GTHRSKARCSDG*RYHWGGGPLQG Trigger: TCCCTGCAGTGGACCTCCTCCCCAGTGGTACCTTCAGCCATCAGAACACCTCGCTTTAGATCTGTGGGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 10 transcripts: ENST00000504609.3 ENST00000512618.5 ENST00000653566.1 ENST00000657274.1 ENST00000662351.1 ENST00000664079.1 ENST00000665795.1 ENST00000665869.1 ENST00000665899.1 ENST00000667636.1 |
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| CDS TCA 72 bp | GACTGCTCATTACATGCCAGAGGGCTGCCCCCAGAATaGGTGATAAGGCTGATGTGGGAGGCCCAGGAGATC | + |
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Preference number: 6 (lower is better) Translates to: DCSLHARGLPPE*VIRLMWEAQEI Trigger: GATCTCCTGGGCCTCCCACATCAGCCTTATCACTCATTCTGGGGGCAGCCCTCTGGCATGTAATGAGCAGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000523194.7 ENST00000657771.1 ENST00000662022.1 |
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| CDS GCA 72 bp | AGGTCCACTGCAGGGAAATCCCTCCTGGGGGAAAATTaGCACGAAAGAAGAAGGCTGATGTGGGAGGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: RSTAGKSLLGEN*HERRRLMWEAQ Trigger: CTGGGCCTCCCACATCAGCCTTCTTCTTTCGTGGCAATTTTCCCCCAGGAGGGATTTCCCTGCAGTGGACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000662351.1 ENST00000665869.1 ENST00000665899.1 ENST00000667636.1 |
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| CDS TCA 72 bp | GACTGCTCATTACATGCCAGAGGGCTGCCCCCAGAATaGGTGATCCTTCCCCTGCACTTGACAGACATGGAG | + |
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Preference number: 6 (lower is better) Translates to: DCSLHARGLPPE*VILPLHLTDME Trigger: CTCCATGTCTGTCAAGTGCAGGGGAAGGATCACTCATTCTGGGGGCAGCCCTCTGGCATGTAATGAGCAGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000504609.3 |
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| CDS GCA 72 bp | AGGTCCACTGCAGGGAAATCCCTCCTGGGGGAAAATTaGCACGAAAGAAGAGTTCCACATGGCTGGGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: RSTAGKSLLGEN*HERRVPHGWEG Trigger: GCCTTCCCAGCCATGTGGAACTCTTCTTTCGTGGCAATTTTCCCCCAGGAGGGATTTCCCTGCAGTGGACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000512618.5 ENST00000657274.1 |
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| CDS GCA 72 bp | CTGGGTGAAGTGAGACCAGTTCCACATGGCTGGGGATaGCTCATGATCATGGCAGAAGGTGAAGCAGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: LGEVRPVPHGWG*LMIMAEGEAGA Trigger: TGCTCCTGCTTCACCTTCTGCCATGATCATGAGGCATCCCCAGCCATGTGGAACTGGTCTCACTTCACCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000523194.7 ENST00000654906.1 ENST00000664079.1 ENST00000665795.1 ENST00000667636.1 |
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| CDS CCA 72 bp | CTGGAGCTGCAGGTTTCACTTCCAGTGTCACTCGCATaGCTACTGTCACATGGGCCTCTCCATAGGACTGCT | + |
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Preference number: 6 (lower is better) Translates to: LELQVSLPVSLA*LLSHGPLHRTA Trigger: AGCAGTCCTATGGAGAGGCCCATGTGACAGTAGCCATGCGAGTGACACTGGAAGTGAAACCTGCAGCTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000504609.3 ENST00000512618.5 ENST00000517934.1 ENST00000523194.7 ENST00000653566.1 ENST00000657771.1 ENST00000658828.1 ENST00000659703.1 ENST00000662022.1 ENST00000662351.1 ENST00000664079.1 ENST00000665869.1 ENST00000665899.1 ENST00000667636.1 ENST00000670528.1 |
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| CDS CCA 72 bp | TCCAGCCTGGGTGAAGTGAGACCAGTTCCACATGGCTaGGGATGCCTCATGATCATGGCAGAAGGTGAAGCA | + |
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Preference number: 6 (lower is better) Translates to: SSLGEVRPVPHG*GCLMIMAEGEA Trigger: TGCTTCACCTTCTGCCATGATCATGAGGCATCCCCAGCCATGTGGAACTGGTCTCACTTCACCCAGGCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000523194.7 ENST00000654906.1 ENST00000664079.1 ENST00000665795.1 ENST00000667636.1 |
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| CDS CCA 72 bp | GGAGGCAGAAGTCCACTTCTTACAAAGCAGCCAAGTTaGGACAAGGCTGATGTGGGAGGCCCAGGAGATCGA | + |
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Preference number: 6 (lower is better) Translates to: GGRSPLLTKQPS*DKADVGGPGDR Trigger: TCGATCTCCTGGGCCTCCCACATCAGCCTTGTCCCAACTTGGCTGCTTTGTAAGAAGTGGACTTCTGCCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000653566.1 ENST00000664079.1 |
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| CDS TCA 72 bp | GACTGCTCATTACATGCCAGAGGGCTGCCCCCAGAATaGGTGATTTTAGTTGCAGCAGAGGGTCTCCTACGG | + |
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Preference number: 6 (lower is better) Translates to: DCSLHARGLPPE*VILVAAEGLLR Trigger: CCGTAGGAGACCCTCTGCTGCAACTAAAATCACTCATTCTGGGGGCAGCCCTCTGGCATGTAATGAGCAGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517934.1 |
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| CDS GCA 72 bp | TGCCAGAGGGCTGCCCCCAGAATGAGTGATTTTAGTTaGAGCAGAGGGTCTCCTACGGATGCATCTTATGGC | + |
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Preference number: 6 (lower is better) Translates to: CQRAAPRMSDFS*SRGSPTDASYG Trigger: GCCATAAGATGCATCCGTAGGAGACCCTCTGCTGCAACTAAAATCACTCATTCTGGGGGCAGCCCTCTGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517934.1 |
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| CDS CCA 72 bp | TCAGGGTCAGGGTCAGGAATCCAGGAGTGGCTTAGTTaGGTGGTTCTGCCTCCCGAGATTATCATCAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: SGSGSGIQEWLS*VVLPPEIIIKL Trigger: CAGCTTGATGATAATCTCGGGAGGCAGAACCACCCAACTAAGCCACTCCTGGATTCCTGACCCTGACCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000523194.7 ENST00000657771.1 ENST00000658828.1 ENST00000659703.1 ENST00000667992.1 ENST00000670528.1 |
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| CDS CCA 72 bp | CAGAGGGCTGCCCCCAGAATGAGTGATAGTTCCACATaGCTGGGAAGGCCTCACAATCATGGCGAAAGTCAA | + |
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Preference number: 6 (lower is better) Translates to: QRAAPRMSDSST*LGRPHNHGESQ Trigger: TTGACTTTCGCCATGATTGTGAGGCCTTCCCAGCCATGTGGAACTATCACTCATTCTGGGGGCAGCCCTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000658828.1 ENST00000670528.1 |
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| CDS CAA 90 bp | AGTTTGCTGTCAAGCTGTCAGCCAGGGCTGCAGTCTTCTAAAGGCTaGACTGGAGCTGCAGGTTTCACTTCCAGTGTCACTCGCATGGCT | + |
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Preference number: 6 (lower is better) Translates to: SLLSSCQPGLQSSKG*TGAAGFTSSVTRMA Trigger: AGCCATGCGAGTGACACTGGAAGTGAAACCTGCAGCTCCAGTCAAGCCTTTAGAAGACTGCAGCCCTGGCTGACAGCTTGACAGCAAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000504609.3 ENST00000512618.5 ENST00000517934.1 ENST00000523194.7 ENST00000653566.1 ENST00000657771.1 ENST00000658828.1 ENST00000659703.1 ENST00000662022.1 ENST00000662351.1 ENST00000664079.1 ENST00000665869.1 ENST00000665899.1 ENST00000667636.1 ENST00000670528.1 |
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| CDS TCA 72 bp | AGGGCTGGCTACCATAGTCTGCCTTCTAGGCTCCAGTaGATCAAGTCCCTCCAACATGCAAAACACGTCCAC | + |
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Preference number: 6 (lower is better) Translates to: RAGYHSLPSRLQ*IKSLQHAKHVH Trigger: GTGGACGTGTTTTGCATGTTGGAGGGACTTGATTCACTGGAGCCTAGAAGGCAGACTATGGTAGCCAGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657771.1 ENST00000658828.1 |
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| CDS GCA 72 bp | TTGGAAGACCTGGACTGTGGCAGACCCAGCTTCCTCTaGTGCATCGCCTTGAACAGGCTTCTTGATTCTGTA | + |
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Preference number: 6 (lower is better) Translates to: LEDLDCGRPSFL*CIALNRLLDSV Trigger: TACAGAATCAAGAAGCCTGTTCAAGGCGATGCAGCAGAGGAAGCTGGGTCTGCCACAGTCCAGGTCTTCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000659703.1 ENST00000665795.1 |
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| CDS CAA 72 bp | GGAATCAGCTTGTTTCTTGCTGGCTTCCCCCGCCTCTaGAACTTAGCCTTCAGCTTTCTCTGTTCCGCTACG | + |
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Preference number: 6 (lower is better) Translates to: GISLFLAGFPRL*NLAFSFLCSAT Trigger: CGTAGCGGAACAGAGAAAGCTGAAGGCTAAGTTCAAGAGGCGGGGGAAGCCAGCAAGAAACAAGCTGATTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000653566.1 ENST00000655801.1 ENST00000659703.1 ENST00000662351.1 ENST00000665869.1 ENST00000665899.1 ENST00000667992.1 |
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| CDS CAA 90 bp | TCTGCAACAGGAATCAGCTTGTTTCTTGCTGGCTTCCCCCGCCTCTaGAACTTAGCCTTCAGCTTTCTCTGTTCCGCTACGTCAGTTGCC | + |
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Preference number: 6 (lower is better) Translates to: SATGISLFLAGFPRL*NLAFSFLCSATSVA Trigger: GGCAACTGACGTAGCGGAACAGAGAAAGCTGAAGGCTAAGTTCAAGAGGCGGGGGAAGCCAGCAAGAAACAAGCTGATTCCTGTTGCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000653566.1 ENST00000655801.1 ENST00000659703.1 ENST00000662351.1 ENST00000665869.1 ENST00000665899.1 ENST00000667992.1 |
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| CDS TCA 72 bp | CTTTACTGGCAGTTCCACATGGCTGGGGATGCCTCATaGTCATGGCAGAAGGTGAAGCAGGAGCAAAGACAT | + |
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Preference number: 6 (lower is better) Translates to: LYWQFHMAGDAS*SWQKVKQEQRH Trigger: ATGTCTTTGCTCCTGCTTCACCTTCTGCCATGATCATGAGGCATCCCCAGCCATGTGGAACTGCCAGTAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000655801.1 ENST00000659703.1 ENST00000662351.1 ENST00000665869.1 ENST00000667992.1 |
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| CDS GCA 72 bp | GAAGACCTGGACTGTGGCAGACCCAGCTTCCTCTGCTaGATCGCCTTGAACAGGCTTCTTGATTCTGTAAAA | + |
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Preference number: 6 (lower is better) Translates to: EDLDCGRPSFLC*IALNRLLDSVK Trigger: TTTTACAGAATCAAGAAGCCTGTTCAAGGCGATGCAGCAGAGGAAGCTGGGTCTGCCACAGTCCAGGTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000659703.1 ENST00000665795.1 |
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| CDS CCA 72 bp | GAAGAGTTCCACATGGCTGGGAAGGCCTCACAATCATaGCGAAAGTCAAGGAGGAGAAAGTCCCATCTCACA | + |
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Preference number: 6 (lower is better) Translates to: EEFHMAGKASQS*RKSRRRKSHLT Trigger: TGTGAGATGGGACTTTCTCCTCCTTGACTTTCGCCATGATTGTGAGGCCTTCCCAGCCATGTGGAACTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000512618.5 ENST00000657274.1 |
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| CDS CCA 72 bp | GGGGAAAATTGCCACGAAAGAAGAGTTCCACATGGCTaGGAAGGCCTCACAATCATGGCGAAAGTCAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: GENCHERRVPHG*EGLTIMAKVKE Trigger: CTCCTTGACTTTCGCCATGATTGTGAGGCCTTCCCAGCCATGTGGAACTCTTCTTTCGTGGCAATTTTCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000512618.5 ENST00000657274.1 |
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| CDS CCA 72 bp | CCTGGGGGAAAATTGCCACGAAAGAAGAGTTCCACATaGCTGGGAAGGCCTCACAATCATGGCGAAAGTCAA | + |
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Preference number: 6 (lower is better) Translates to: PGGKLPRKKSST*LGRPHNHGESQ Trigger: TTGACTTTCGCCATGATTGTGAGGCCTTCCCAGCCATGTGGAACTCTTCTTTCGTGGCAATTTTCCCCCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000512618.5 ENST00000657274.1 |
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| CDS CCA 72 bp | AGGTCATGTGCTTCACAGAATTCCAGAAGGCTGATGTaGGAGGCCCAGGAGATCGAGACTATAGTGAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: RSCASQNSRRLM*EAQEIETIVSC Trigger: ACAGCTCACTATAGTCTCGATCTCCTGGGCCTCCCACATCAGCCTTCTGGAATTCTGTGAAGCACATGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654906.1 ENST00000655801.1 |
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| CDS TCA 72 bp | AGTGAGACCCTCAGAGAACCAGGTGGTGCTTATTGCTaGGCTGATGAGAGTTCTGCAACAGGAATCAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: SETLREPGGAYC*ADESSATGISL Trigger: CAAGCTGATTCCTGTTGCAGAACTCTCATCAGCTCAGCAATAAGCACCACCTGGTTCTCTGAGGGTCTCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000653566.1 ENST00000655801.1 ENST00000659703.1 ENST00000662351.1 ENST00000665869.1 ENST00000665899.1 ENST00000667992.1 |
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| CDS TCA 72 bp | GCTCATTACATGCCAGAGGGCTGCCCCCAGAATGAGTaGTATCCTGCTAGGCATGCAAAGCCAATCTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: AHYMPEGCPQNE*YPARHAKPIFK Trigger: TTTGAAGATTGGCTTTGCATGCCTAGCAGGATATCACTCATTCTGGGGGCAGCCCTCTGGCATGTAATGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000664079.1 |
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| CDS GCA 72 bp | TTTATTCCTTTACTGGCAGTTCCACATGGCTGGGGATaGCTCATGATCATGGCAGAAGGTGAAGCAGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: FIPLLAVPHGWG*LMIMAEGEAGA Trigger: TGCTCCTGCTTCACCTTCTGCCATGATCATGAGGCATCCCCAGCCATGTGGAACTGCCAGTAAAGGAATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000655801.1 ENST00000659703.1 ENST00000662351.1 ENST00000665869.1 ENST00000667992.1 |
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| CDS TCA 72 bp | TTATACAAGGGTATGAATACCAGGAGGAGACAATCTTaGGGGCTGGCTACCATAGTCTGCCTTCTAGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: LYKGMNTRRRQS*GLATIVCLLGS Trigger: GGAGCCTAGAAGGCAGACTATGGTAGCCAGCCCTCAAGATTGTCTCCTCCTGGTATTCATACCCTTGTATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657771.1 ENST00000658828.1 |
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| CDS GCA 72 bp | GCTGCGTTTCCATTTATCCAAAGACTTGAGGTCATGTaGTTCACAGAATTCCAGAAGGCTGATGTGGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: AAFPFIQRLEVM*FTEFQKADVGG Trigger: GCCTCCCACATCAGCCTTCTGGAATTCTGTGAAGCACATGACCTCAAGTCTTTGGATAAATGGAAACGCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654906.1 ENST00000655801.1 |
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| CDS CAA 90 bp | TCCAGAGTTTTTGAGGACCAGGAACCCAGGAACAGTTTAGCTGAGTaGTTCAAGCTGAGAGTCTCTCATGAGTTTGCTGTCAAGCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: SRVFEDQEPRNSLAE*FKLRVSHEFAVKLS Trigger: TGACAGCTTGACAGCAAACTCATGAGAGACTCTCAGCTTGAACAACTCAGCTAAACTGTTCCTGGGTTCCTGGTCCTCAAAAACTCTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000504609.3 ENST00000653566.1 ENST00000662351.1 |
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| CDS CAA 90 bp | CGTACAGTTTTTGAGGACCAGGAACCCAGGAACAGTTTAGCTGAGTaGTTCAAGCTGAGAGTCTCTCATGAGTTTGCTGTCAAGCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: RTVFEDQEPRNSLAE*FKLRVSHEFAVKLS Trigger: TGACAGCTTGACAGCAAACTCATGAGAGACTCTCAGCTTGAACAACTCAGCTAAACTGTTCCTGGGTTCCTGGTCCTCAAAAACTGTACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000517934.1 ENST00000658828.1 ENST00000662022.1 ENST00000664079.1 ENST00000665869.1 ENST00000665899.1 ENST00000667636.1 |
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| CDS CCA 72 bp | ATGGTAGCCACAATGTCTTTTATAACAAGGCTGATGTaGGAGGCCCAGGAGATCGAGACTATAGTGAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: MVATMSFITRLM*EAQEIETIVSC Trigger: ACAGCTCACTATAGTCTCGATCTCCTGGGCCTCCCACATCAGCCTTGTTATAAAAGACATTGTGGCTACCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667992.1 |
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| CDS CAA 72 bp | TTTGAGGACCAGGAACCCAGGAACAGTTTAGCTGAGTaGTTCAAGCTGAGAGTCTCTCATGAGTTTGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: FEDQEPRNSLAE*FKLRVSHEFAV Trigger: GACAGCAAACTCATGAGAGACTCTCAGCTTGAACAACTCAGCTAAACTGTTCCTGGGTTCCTGGTCCTCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000504609.3 ENST00000517934.1 ENST00000523194.7 ENST00000653566.1 ENST00000657771.1 ENST00000658828.1 ENST00000659703.1 ENST00000662022.1 ENST00000662351.1 ENST00000664079.1 ENST00000665869.1 ENST00000665899.1 ENST00000667636.1 ENST00000670528.1 |
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| CDS CAA 72 bp | ATTATACAAGGGTATGAATACCAGGAGGAGACAATCTaGAGGGCTGGCTACCATAGTCTGCCTTCTAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: IIQGYEYQEETI*RAGYHSLPSRL Trigger: GAGCCTAGAAGGCAGACTATGGTAGCCAGCCCTCAAGATTGTCTCCTCCTGGTATTCATACCCTTGTATAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657771.1 ENST00000658828.1 |
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| CDS CAA 90 bp | GCAAAGACATGTCTTACATGGCGGCAGGCAAGAGAGAATGAGAGCTaGTGCAGGGAAATTCCTCCTAATAAAACCATCAGATCTCATGAG | + |
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Preference number: 6 (lower is better) Translates to: AKTCLTWRQARENES*CREIPPNKTIRSHE Trigger: CTCATGAGATCTGATGGTTTTATTAGGAGGAATTTCCCTGCACAAGCTCTCATTCTCTCTTGCCTGCCGCCATGTAAGACATGTCTTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654906.1 ENST00000655801.1 |
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| CDS TCA 72 bp | GACTGCTCATTACATGCCAGAGGGCTGCCCCCAGAATaGGTGATCATAGAAATGGTCATTGGATTTGATGAA | + |
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Preference number: 6 (lower is better) Translates to: DCSLHARGLPPE*VIIEMVIGFDE Trigger: TTCATCAAATCCAATGACCATTTCTATGATCACTCATTCTGGGGGCAGCCCTCTGGCATGTAATGAGCAGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000512618.5 ENST00000653566.1 ENST00000662351.1 ENST00000665869.1 ENST00000665899.1 ENST00000667636.1 |
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| CDS TCA 72 bp | TCCGGCATAAGCTGCGTTTCCATTTATCCAAAGACTTaGGGTCATGTGCTTCACAGAATTCCAGCTCACACT | + |
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Preference number: 6 (lower is better) Translates to: SGISCVSIYPKT*GHVLHRIPAHT Trigger: AGTGTGAGCTGGAATTCTGTGAAGCACATGACCTCAAGTCTTTGGATAAATGGAAACGCAGCTTATGCCGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000523194.7 ENST00000657771.1 ENST00000658828.1 ENST00000659703.1 ENST00000667992.1 ENST00000670528.1 |
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| CDS TCA 72 bp | GTCACATCTCAGCTTCATCTTTGGATTATGTTTTCATaGTGGTGCCCAGGATTTGACCTCTGTCCTTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: VTSQLHLWIMFS*WCPGFDLCPSA Trigger: GGCTGAAGGACAGAGGTCAAATCCTGGGCACCATCATGAAAACATAATCCAAAGATGAAGCTGAGATGTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658828.1 |
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| CDS GCA 72 bp | GCTGCGTTTCCATTTATCCAAAGACTTGAGGTCATGTaGTTCACAGAATTCCAGCTCACACTGTTTCTAGGG | + |
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Preference number: 6 (lower is better) Translates to: AAFPFIQRLEVM*FTEFQLTLFLG Trigger: CCCTAGAAACAGTGTGAGCTGGAATTCTGTGAAGCACATGACCTCAAGTCTTTGGATAAATGGAAACGCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000523194.7 ENST00000657771.1 ENST00000658828.1 ENST00000659703.1 ENST00000667992.1 ENST00000670528.1 |
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| CDS GCA 72 bp | CTTACATGGCGGCAGGCAAGAGAGAATGAGAGCTTGTaGAGGGAAATTCCTCCTAATAAAACCATCAGATCT | + |
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Preference number: 6 (lower is better) Translates to: LTWRQARENESL*REIPPNKTIRS Trigger: AGATCTGATGGTTTTATTAGGAGGAATTTCCCTGCACAAGCTCTCATTCTCTCTTGCCTGCCGCCATGTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654906.1 ENST00000655801.1 |
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| CDS CAA 72 bp | TTCCGGCATAAGCTGCGTTTCCATTTATCCAAAGACTaGAGGTCATGTGCTTCACAGAATTCCAGCTCACAC | + |
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Preference number: 6 (lower is better) Translates to: FRHKLRFHLSKD*RSCASQNSSSH Trigger: GTGTGAGCTGGAATTCTGTGAAGCACATGACCTCAAGTCTTTGGATAAATGGAAACGCAGCTTATGCCGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000523194.7 ENST00000657771.1 ENST00000658828.1 ENST00000659703.1 ENST00000667992.1 ENST00000670528.1 |
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| CDS CAA 72 bp | TGTCTTACATGGCGGCAGGCAAGAGAGAATGAGAGCTaGTGCAGGGAAATTCCTCCTAATAAAACCATCAGA | + |
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Preference number: 6 (lower is better) Translates to: CLTWRQARENES*CREIPPNKTIR Trigger: TCTGATGGTTTTATTAGGAGGAATTTCCCTGCACAAGCTCTCATTCTCTCTTGCCTGCCGCCATGTAAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000654906.1 ENST00000655801.1 |
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| CDS CAA 72 bp | TTCCGGCATAAGCTGCGTTTCCATTTATCCAAAGACTaGAGGTCATGTGCTTCACAGAATTCCAGAAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: FRHKLRFHLSKD*RSCASQNSRRL Trigger: CAGCCTTCTGGAATTCTGTGAAGCACATGACCTCAAGTCTTTGGATAAATGGAAACGCAGCTTATGCCGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000654906.1 ENST00000655801.1 |
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| CDS CAA 90 bp | ATAACAGTTTTTGAGGACCAGGAACCCAGGAACAGTTTAGCTGAGTaGTTCAAGCTGAGAGTCTCTCATGAGTTTGCTGTCAAGCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: ITVFEDQEPRNSLAE*FKLRVSHEFAVKLS Trigger: TGACAGCTTGACAGCAAACTCATGAGAGACTCTCAGCTTGAACAACTCAGCTAAACTGTTCCTGGGTTCCTGGTCCTCAAAAACTGTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000523194.7 ENST00000659703.1 ENST00000670528.1 |
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| CDS CAA 90 bp | TTAACAGTTTTTGAGGACCAGGAACCCAGGAACAGTTTAGCTGAGTaGTTCAAGCTGAGAGTCTCTCATGAGTTTGCTGTCAAGCTGTCA | + |
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Preference number: 6 (lower is better) Translates to: LTVFEDQEPRNSLAE*FKLRVSHEFAVKLS Trigger: TGACAGCTTGACAGCAAACTCATGAGAGACTCTCAGCTTGAACAACTCAGCTAAACTGTTCCTGGGTTCCTGGTCCTCAAAAACTGTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000657771.1 |
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| CDS TCA 72 bp | ACTTTAGAGGGCCTTTGTGTGACCAAACTGGTACTCTaGGGCACCACTTTTGATCTTTCTGAGGTCATAACA | + |
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Preference number: 6 (lower is better) Translates to: TLEGLCVTKLVL*GTTFDLSEVIT Trigger: TGTTATGACCTCAGAAAGATCAAAAGTGGTGCCTCAGAGTACCAGTTTGGTCACACAAAGGCCCTCTAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658828.1 |
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| CDS TCA 72 bp | AGATTCTCATTGCATGGTGGTTGGCTTCCCTTTGAGTaGGTGATGAGAGATGGTAGCCACAATGTCTTTTAT | + |
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Preference number: 6 (lower is better) Translates to: RFSLHGGWLPFE*VMRDGSHNVFY Trigger: ATAAAAGACATTGTGGCTACCATCTCTCATCACTCACTCAAAGGGAAGCCAACCACCATGCAATGAGAATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000523194.7 ENST00000657771.1 ENST00000658828.1 ENST00000659703.1 ENST00000667992.1 ENST00000670528.1 |
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| CDS GCA 72 bp | GCTGCGTTTCCATTTATCCAAAGACTTGAGGTCATGTaGTTCACAGAATTCCAGCATAGAAATGGTCATTGG | + |
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Preference number: 6 (lower is better) Translates to: AAFPFIQRLEVM*FTEFQHRNGHW Trigger: CCAATGACCATTTCTATGCTGGAATTCTGTGAAGCACATGACCTCAAGTCTTTGGATAAATGGAAACGCAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000657274.1 ENST00000665795.1 |
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| CDS CAA 72 bp | CCCAGTTTACCAGGTACATTCCCACCACCCACATTATaGCAGACAACAATATTGCTAAGATTTATGCCACTC | + |
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Preference number: 6 (lower is better) Translates to: PSLPGTFPPPTL*QTTILLRFMPL Trigger: GAGTGGCATAAATCTTAGCAATATTGTTGTCTGCAATAATGTGGGTGGTGGGAATGTACCTGGTAAACTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658828.1 |
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| CDS CAA 90 bp | ACCTCCACCAGCAGCCTGGTCAAAGTCCAAAGTTTTTCTAATGTTTaGTTCAAGGCTCCTGAGACTTTCACTGCTATGCTTCTTAAATTC | + |
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Preference number: 6 (lower is better) Translates to: TSTSSLVKVQSFSNV*FKAPETFTAMLLKF Trigger: GAATTTAAGAAGCATAGCAGTGAAAGTCTCAGGAGCCTTGAACAAAACATTAGAAAAACTTTGGACTTTGACCAGGCTGCTGGTGGAGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000658828.1 |
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| CDS CAA 72 bp | TTCCGGCATAAGCTGCGTTTCCATTTATCCAAAGACTaGAGGTCATGTGCTTCACAGAATTCCAGAGTTTTT | + |
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Preference number: 6 (lower is better) Translates to: FRHKLRFHLSKD*RSCASQNSRVF Trigger: AAAAACTCTGGAATTCTGTGAAGCACATGACCTCAAGTCTTTGGATAAATGGAAACGCAGCTTATGCCGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000504609.3 ENST00000653566.1 ENST00000662351.1 |
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| CDS CAA 72 bp | AGCAGCCTGGTCAAAGTCCAAAGTTTTTCTAATGTTTaGTTCAAGGCTCCTGAGACTTTCACTGCTATGCTT | + |
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Preference number: 6 (lower is better) Translates to: SSLVKVQSFSNV*FKAPETFTAML Trigger: AAGCATAGCAGTGAAAGTCTCAGGAGCCTTGAACAAAACATTAGAAAAACTTTGGACTTTGACCAGGCTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000658828.1 |
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| CDS CAA 90 bp | TTACCAGGTACATTCCCACCACCCACATTATTGCAGACAACAATATaGCTAAGATTTATGCCACTCCATAGTAAGGATTCCCTGTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: LPGTFPPPTLLQTTI*LRFMPLHSKDSLFC Trigger: ACAGAACAGGGAATCCTTACTATGGAGTGGCATAAATCTTAGCAATATTGTTGTCTGCAATAATGTGGGTGGTGGGAATGTACCTGGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658828.1 |
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| CDS CAA 90 bp | ATTAGATCACCCAGTTTACCAGGTACATTCCCACCACCCACATTATaGCAGACAACAATATTGCTAAGATTTATGCCACTCCATAGTAAG | + |
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Preference number: 6 (lower is better) Translates to: IRSPSLPGTFPPPTL*QTTILLRFMPLHSK Trigger: CTTACTATGGAGTGGCATAAATCTTAGCAATATTGTTGTCTGCAATAATGTGGGTGGTGGGAATGTACCTGGTAAACTGGGTGATCTAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658828.1 |
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| CDS CAA 72 bp | ACATTCCCACCACCCACATTATTGCAGACAACAATATaGCTAAGATTTATGCCACTCCATAGTAAGGATTCC | + |
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Preference number: 6 (lower is better) Translates to: TFPPPTLLQTTI*LRFMPLHSKDS Trigger: GGAATCCTTACTATGGAGTGGCATAAATCTTAGCAATATTGTTGTCTGCAATAATGTGGGTGGTGGGAATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658828.1 |
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| CDS CAA 72 bp | ATCTTTGGATTATGTTTTCATGATGGTGCCCAGGATTaGACCTCTGTCCTTCAGCCATTTCTTAATTTAGCA | + |
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Preference number: 6 (lower is better) Translates to: IFGLCFHDGAQD*TSVLQPFLNLA Trigger: TGCTAAATTAAGAAATGGCTGAAGGACAGAGGTCAAATCCTGGGCACCATCATGAAAACATAATCCAAAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000658828.1 |
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| CDS CCA 72 bp | ACACTATATGCATTAATATTCAAAAAGGAAAGGTACTaGACACACTACTATGTCCCCATAGCAGCTCTGAAA | + |
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Preference number: 6 (lower is better) Translates to: TLYALIFKKERY*THYYVPIAALK Trigger: TTTCAGAGCTGCTATGGGGACATAGTAGTGTGTCCAGTACCTTTCCTTTTTGAATATTAATGCATATAGTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000657771.1 ENST00000658828.1 |
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| CDS CAA 72 bp | AAACACGTCCACTCCATCTCAACATTTCTAAAATTCTaGTCTCATTACAGCATCAACTCAAAGTCTAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: KHVHSISTFLKF*SHYSINSKSRV Trigger: GACTCTAGACTTTGAGTTGATGCTGTAATGAGACAAGAATTTTAGAAATGTTGAGATGGAGTGGACGTGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000657771.1 ENST00000658828.1 |
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| CDS CAA 90 bp | CAACATGCAAAACACGTCCACTCCATCTCAACATTTCTAAAATTCTaGTCTCATTACAGCATCAACTCAAAGTCTAGAGTCTTGTCATTT | + |
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Preference number: 6 (lower is better) Translates to: QHAKHVHSISTFLKF*SHYSINSKSRVLSF Trigger: AAATGACAAGACTCTAGACTTTGAGTTGATGCTGTAATGAGACAAGAATTTTAGAAATGTTGAGATGGAGTGGACGTGTTTTGCATGTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000657771.1 ENST00000658828.1 |
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