Pregenerated sensors for LINC01022 (Homo sapiens)
Ensembl gene IDs: ENSG00000232715Ensembl transcript IDs: ENST00000415652.1
Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CACGCCCACCGTTCACGCCAAGGGATGCGGCAGTCCGACGGCCTCTaGGAATCGCAGGGCCTTGGTCTTGGGAGCTGCTCTCCTGCAGTG | + |
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Preference number: 5 (lower is better) Translates to: HAHRSRQGMRQSDGL*ESQGLGLGSCSPAV Trigger: CACTGCAGGAGAGCAGCTCCCAAGACCAAGGCCCTGCGATTCCCAGAGGCCGTCGGACTGCCGCATCCCTTGGCGTGAACGGTGGGCGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415652.1 |
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| CDS GCA 90 bp | CCAGACTCTGGGTCCTTCTCCACGCCCACCGTTCACGCCAAGGGATaGGGCAGTCCGACGGCCTCTGGGAATCGCAGGGCCTTGGTCTTG | + |
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Preference number: 5 (lower is better) Translates to: PDSGSFSTPTVHAKG*GSPTASGNRRALVL Trigger: CAAGACCAAGGCCCTGCGATTCCCAGAGGCCGTCGGACTGCCGCATCCCTTGGCGTGAACGGTGGGCGTGGAGAAGGACCCAGAGTCTGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415652.1 |
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| CDS TCA 90 bp | GTTGACCTGCCCCCTCTCGGAACCTGGGTTAGCCTGCCTGGTGCTTaGGGCAGGGAGCTGGCCACGCTGCGCTGCTGTCTTGTAGGTGCT | + |
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Preference number: 5 (lower is better) Translates to: VDLPPLGTWVSLPGA*GRELATLRCCLVGA Trigger: AGCACCTACAAGACAGCAGCGCAGCGTGGCCAGCTCCCTGCCTCAAGCACCAGGCAGGCTAACCCAGGTTCCGAGAGGGGGCAGGTCAAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000415652.1 |
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| CDS GCA 90 bp | TTTTATCCAGTGTTGACCTGCCCCCTCTCGGAACCTGGGTTAGCCTaGCTGGTGCTTGAGGCAGGGAGCTGGCCACGCTGCGCTGCTGTC | + |
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Preference number: 5 (lower is better) Translates to: FYPVLTCPLSEPGLA*LVLEAGSWPRCAAV Trigger: GACAGCAGCGCAGCGTGGCCAGCTCCCTGCCTCAAGCACCAGGCAGGCTAACCCAGGTTCCGAGAGGGGGCAGGTCAACACTGGATAAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000415652.1 |
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| CDS CCA 90 bp | CCAAAGTTCAGGGCCACAGTCCTCCAGGATGTAGGCTCCAGACTCTaGGTCCTTCTCCACGCCCACCGTTCACGCCAAGGGATGCGGCAG | + |
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Preference number: 5 (lower is better) Translates to: PKFRATVLQDVGSRL*VLLHAHRSRQGMRQ Trigger: CTGCCGCATCCCTTGGCGTGAACGGTGGGCGTGGAGAAGGACCCAGAGTCTGGAGCCTACATCCTGGAGGACTGTGGCCCTGAACTTTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415652.1 |
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| CDS CCA 90 bp | CCAAGGGATGCGGCAGTCCGACGGCCTCTGGGAATCGCAGGGCCTTaGTCTTGGGAGCTGCTCTCCTGCAGTGTAAACTCAGTGACTCTC | + |
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Preference number: 5 (lower is better) Translates to: PRDAAVRRPLGIAGP*SWELLSCSVNSVTL Trigger: GAGAGTCACTGAGTTTACACTGCAGGAGAGCAGCTCCCAAGACCAAGGCCCTGCGATTCCCAGAGGCCGTCGGACTGCCGCATCCCTTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415652.1 |
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| CDS CCA 90 bp | GATGCGGCAGTCCGACGGCCTCTGGGAATCGCAGGGCCTTGGTCTTaGGAGCTGCTCTCCTGCAGTGTAAACTCAGTGACTCTCATTCAG | + |
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Preference number: 5 (lower is better) Translates to: DAAVRRPLGIAGPWS*ELLSCSVNSVTLIQ Trigger: CTGAATGAGAGTCACTGAGTTTACACTGCAGGAGAGCAGCTCCCAAGACCAAGGCCCTGCGATTCCCAGAGGCCGTCGGACTGCCGCATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415652.1 |
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| CDS GCA 90 bp | CGGCCTCTGGGAATCGCAGGGCCTTGGTCTTGGGAGCTGCTCTCCTaGAGTGTAAACTCAGTGACTCTCATTCAGGCAACAGACCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: RPLGIAGPWSWELLS*SVNSVTLIQATDLS Trigger: GGAGAGGTCTGTTGCCTGAATGAGAGTCACTGAGTTTACACTGCAGGAGAGCAGCTCCCAAGACCAAGGCCCTGCGATTCCCAGAGGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415652.1 |
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| CDS CCA 90 bp | TGTTGTGATTCCTCCAGTGCCTCTGGTTTTCGCTTTCCCTTTTCTTaGGGCTTGTTTGTGTTTAACCAAAGTTCAGGGCCACAGTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: CCDSSSASGFRFPFS*GLFVFNQSSGPQSS Trigger: GGAGGACTGTGGCCCTGAACTTTGGTTAAACACAAACAAGCCCCAAGAAAAGGGAAAGCGAAAACCAGAGGCACTGGAGGAATCACAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000415652.1 |
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| CDS CCA 72 bp | CGTTCACGCCAAGGGATGCGGCAGTCCGACGGCCTCTaGGAATCGCAGGGCCTTGGTCTTGGGAGCTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: RSRQGMRQSDGL*ESQGLGLGSCS Trigger: AGAGCAGCTCCCAAGACCAAGGCCCTGCGATTCCCAGAGGCCGTCGGACTGCCGCATCCCTTGGCGTGAACG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415652.1 |
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| CDS CCA 72 bp | AGGGCCACAGTCCTCCAGGATGTAGGCTCCAGACTCTaGGTCCTTCTCCACGCCCACCGTTCACGCCAAGGG | + |
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Preference number: 6 (lower is better) Translates to: RATVLQDVGSRL*VLLHAHRSRQG Trigger: CCCTTGGCGTGAACGGTGGGCGTGGAGAAGGACCCAGAGTCTGGAGCCTACATCCTGGAGGACTGTGGCCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415652.1 |
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| CDS CAA 90 bp | GCCAAGGGATGCGGCAGTCCGACGGCCTCTGGGAATCGCAGGGCCTaGGTCTTGGGAGCTGCTCTCCTGCAGTGTAAACTCAGTGACTCT | + |
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Preference number: 6 (lower is better) Translates to: AKGCGSPTASGNRRA*VLGAALLQCKLSDS Trigger: AGAGTCACTGAGTTTACACTGCAGGAGAGCAGCTCCCAAGACCAAGGCCCTGCGATTCCCAGAGGCCGTCGGACTGCCGCATCCCTTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415652.1 |
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| CDS CAA 90 bp | GGATGCGGCAGTCCGACGGCCTCTGGGAATCGCAGGGCCTTGGTCTaGGGAGCTGCTCTCCTGCAGTGTAAACTCAGTGACTCTCATTCA | + |
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Preference number: 6 (lower is better) Translates to: GCGSPTASGNRRALV*GAALLQCKLSDSHS Trigger: TGAATGAGAGTCACTGAGTTTACACTGCAGGAGAGCAGCTCCCAAGACCAAGGCCCTGCGATTCCCAGAGGCCGTCGGACTGCCGCATCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415652.1 |
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| CDS GCA 72 bp | GGAATCGCAGGGCCTTGGTCTTGGGAGCTGCTCTCCTaGAGTGTAAACTCAGTGACTCTCATTCAGGCAACA | + |
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Preference number: 6 (lower is better) Translates to: GIAGPWSWELLS*SVNSVTLIQAT Trigger: TGTTGCCTGAATGAGAGTCACTGAGTTTACACTGCAGGAGAGCAGCTCCCAAGACCAAGGCCCTGCGATTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415652.1 |
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