Pregenerated sensors for LINC01019 (Homo sapiens)
Ensembl gene IDs: ENSG00000248118Ensembl transcript IDs: ENST00000505443.1, ENST00000662836.1
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGCTGTGCTTGGAAGGCCCCGGGAGCAGCCAGGGAGCGCGGTGCCTaGCCTCCACGGCGGCCGCCTGCGGGGAACAGGGCAGCGTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: GCAWKAPGAARERGA*PPRRPPAGNRAASS Trigger: GCTGGACGCTGCCCTGTTCCCCGCAGGCGGCCGCCGTGGAGGGCAGGCACCGCGCTCCCTGGCTGCTCCCGGGGCCTTCCAAGCACAGCC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505443.1 |
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| CDS GCA 90 bp | CCGTGGCTGTGCTTGGAAGGCCCCGGGAGCAGCCAGGGAGCGCGGTaGCTGCCCTCCACGGCGGCCGCCTGCGGGGAACAGGGCAGCGTC | + |
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Preference number: 5 (lower is better) Translates to: PWLCLEGPGSSQGAR*LPSTAAACGEQGSV Trigger: GACGCTGCCCTGTTCCCCGCAGGCGGCCGCCGTGGAGGGCAGGCACCGCGCTCCCTGGCTGCTCCCGGGGCCTTCCAAGCACAGCCACGG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505443.1 |
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| CDS TCA 90 bp | AGCCCGTGGCCGCACTGTCCGGAGGCCCCTCCAGACTCTCCGAGGTaGCCCCATGCCCAGGCACCTCTGAGGGCACCATCCAGGGCGAGC | + |
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Preference number: 5 (lower is better) Translates to: SPWPHCPEAPPDSPR*PHAQAPLRAPSRAS Trigger: GCTCGCCCTGGATGGTGCCCTCAGAGGTGCCTGGGCATGGGGTCACCTCGGAGAGTCTGGAGGGGCCTCCGGACAGTGCGGCCACGGGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505443.1 |
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| CDS GCA 90 bp | GCCGCACTGTCCGGAGGCCCCTCCAGACTCTCCGAGGTGACCCCATaGCCAGGCACCTCTGAGGGCACCATCCAGGGCGAGCTGGATGGT | + |
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Preference number: 5 (lower is better) Translates to: AALSGGPSRLSEVTP*PGTSEGTIQGELDG Trigger: ACCATCCAGCTCGCCCTGGATGGTGCCCTCAGAGGTGCCTGGGCATGGGGTCACCTCGGAGAGTCTGGAGGGGCCTCCGGACAGTGCGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505443.1 |
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| CDS CCA 90 bp | CTCCTGGACAGCTGCGGCCTCCCTGTCTATCTCCTAGAGCCTCCATaGGGCTGTCTGCTCCTGCCCTCCAGGCGGCCGTGTCACCTGGCT | + |
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Preference number: 5 (lower is better) Translates to: LLDSCGLPVYLLEPP*GCLLLPSRRPCHLA Trigger: AGCCAGGTGACACGGCCGCCTGGAGGGCAGGAGCAGACAGCCCCATGGAGGCTCTAGGAGATAGACAGGGAGGCCGCAGCTGTCCAGGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505443.1 |
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| CDS GCA 90 bp | ATTGCCCTCGTGGTCCCACCCAGTGATGACAAAGGCAGATGCTGCTaGTGGCCACACGGCCCCTTCCCTACCACGGGGCAGCTCCAGCCC | + |
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Preference number: 5 (lower is better) Translates to: IALVVPPSDDKGRCC*WPHGPFPTTGQLQP Trigger: GGGCTGGAGCTGCCCCGTGGTAGGGAAGGGGCCGTGTGGCCAGCAGCAGCATCTGCCTTTGTCATCACTGGGTGGGACCACGAGGGCAAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505443.1 |
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| CDS GCA 90 bp | AGCATTGCCCTCGTGGTCCCACCCAGTGATGACAAAGGCAGATGCTaGTGCTGGCCACACGGCCCCTTCCCTACCACGGGGCAGCTCCAG | + |
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Preference number: 5 (lower is better) Translates to: SIALVVPPSDDKGRC*CWPHGPFPTTGQLQ Trigger: CTGGAGCTGCCCCGTGGTAGGGAAGGGGCCGTGTGGCCAGCAGCAGCATCTGCCTTTGTCATCACTGGGTGGGACCACGAGGGCAATGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505443.1 |
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| CDS CCA 90 bp | CCTCTGAGGGCACCATCCAGGGCGAGCTGGATGGTGGGAGCCTCCTaGACAGGTAGACCCTCCCCTGGGCTGAGGCTTCATATGGACTCC | + |
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Preference number: 5 (lower is better) Translates to: PLRAPSRASWMVGAS*TGRPSPGLRLHMDS Trigger: GGAGTCCATATGAAGCCTCAGCCCAGGGGAGGGTCTACCTGTCCAGGAGGCTCCCACCATCCAGCTCGCCCTGGATGGTGCCCTCAGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505443.1 |
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| CDS TCA 90 bp | CACGCTCAGCTGCTGCCTTGTGGGGCCGTGCACAGGTTTCTCCAGTaGGGCCACCTCCGGCCTATACCCACACACGTCTTTCCACCCTGC | + |
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Preference number: 5 (lower is better) Translates to: HAQLLPCGAVHRFLQ*GHLRPIPTHVFPPC Trigger: GCAGGGTGGAAAGACGTGTGTGGGTATAGGCCGGAGGTGGCCTCACTGGAGAAACCTGTGCACGGCCCCACAAGGCAGCAGCTGAGCGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505443.1 |
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| CDS CCA 90 bp | GGAGAGGATGGGCACAGGTCCTCCCTAGTGCCCTCAGAGGGAGCCTaGCCCTACAGCACCATGATCTGGGGCTTTGGGCCTCCATGGTGT | + |
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Preference number: 5 (lower is better) Translates to: GEDGHRSSLVPSEGA*PYSTMIWGFGPPWC Trigger: ACACCATGGAGGCCCAAAGCCCCAGATCATGGTGCTGTAGGGCCAGGCTCCCTCTGAGGGCACTAGGGAGGACCTGTGCCCATCCTCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505443.1 |
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| CDS CCA 90 bp | CACCACCACAGCCTCCTCAAGTGCGCGGCACAGGACCCTCCAGGGTaGGCACTATTCCATGGAGAACCTTCCAGCACAGCTCAAATGCTC | + |
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Preference number: 5 (lower is better) Translates to: HHHSLLKCAAQDPPG*ALFHGEPSSTAQML Trigger: GAGCATTTGAGCTGTGCTGGAAGGTTCTCCATGGAATAGTGCCCACCCTGGAGGGTCCTGTGCCGCGCACTTGAGGAGGCTGTGGTGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505443.1 ENST00000662836.1 |
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| CDS TCA 90 bp | CTGGGTGCTGAGACTTTGGGGCCTGCCTTCTTAGCGCGTGGATGGTaGAGCTGCAGAATGGGGCAGTGTGAGAACCGGTGGATGGGAAAC | + |
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Preference number: 5 (lower is better) Translates to: LGAETLGPAFLARGW*SCRMGQCENRWMGN Trigger: GTTTCCCATCCACCGGTTCTCACACTGCCCCATTCTGCAGCTTCACCATCCACGCGCTAAGAAGGCAGGCCCCAAAGTCTCAGCACCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000505443.1 ENST00000662836.1 |
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| CDS CCA 90 bp | ATGGAAGAGACAGACTTTCGCTCCTGGGTCAGAAGCCCTGGCTCCTaGGCAGTGTGGAAGCTGCCCCATTCTCCAGAGCAGGCACCATGT | + |
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Preference number: 5 (lower is better) Translates to: MEETDFRSWVRSPGS*AVWKLPHSPEQAPC Trigger: ACATGGTGCCTGCTCTGGAGAATGGGGCAGCTTCCACACTGCCCAGGAGCCAGGGCTTCTGACCCAGGAGCGAAAGTCTGTCTCTTCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505443.1 ENST00000662836.1 |
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| CDS CCA 90 bp | CCTCAAGTGCGCGGCACAGGACCCTCCAGGGTGGGCACTATTCCATaGAGAACCTTCCAGCACAGCTCAAATGCTCACACCTTGGTGTCA | + |
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Preference number: 5 (lower is better) Translates to: PQVRGTGPSRVGTIP*RTFQHSSNAHTLVS Trigger: TGACACCAAGGTGTGAGCATTTGAGCTGTGCTGGAAGGTTCTCCATGGAATAGTGCCCACCCTGGAGGGTCCTGTGCCGCGCACTTGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505443.1 ENST00000662836.1 |
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| CDS CCA 90 bp | TCCCTAGTGCCCTCAGAGGGAGCCTGGCCCTACAGCACCATGATCTaGGGCTTTGGGCCTCCATGGTGTGAGAGAATAAATTCCTGTGGT | + |
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Preference number: 5 (lower is better) Translates to: SLVPSEGAWPYSTMI*GFGPPWCERINSCG Trigger: ACCACAGGAATTTATTCTCTCACACCATGGAGGCCCAAAGCCCCAGATCATGGTGCTGTAGGGCCAGGCTCCCTCTGAGGGCACTAGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505443.1 |
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| CDS GCA 90 bp | TGGTGGGCAATGGGATGCCTGAGGCCCAGAAAGTCGTGCAAATACTaGCAGCTCCCAGAAATGGAAGAGACAGACTTTCGCTCCTGGGTC | + |
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Preference number: 5 (lower is better) Translates to: WWAMGCLRPRKSCKY*QLPEMEETDFRSWV Trigger: GACCCAGGAGCGAAAGTCTGTCTCTTCCATTTCTGGGAGCTGGCAGTATTTGCACGACTTTCTGGGCCTCAGGCATCCCATTGCCCACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505443.1 ENST00000662836.1 |
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| CDS GCA 90 bp | AGCACAGCTCAAATGCTCACACCTTGGTGTCAAGGGGCATCGCTGTaGACACTGCACCTTCCAGATGCAACTGAGCGCTCCTCAGAGAAC | + |
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Preference number: 5 (lower is better) Translates to: STAQMLTPWCQGASL*TLHLPDATERSSEN Trigger: GTTCTCTGAGGAGCGCTCAGTTGCATCTGGAAGGTGCAGTGTGCACAGCGATGCCCCTTGACACCAAGGTGTGAGCATTTGAGCTGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505443.1 ENST00000662836.1 |
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| CDS GCA 90 bp | CTGGCCGGTATCTCTCATCGCTGGACACTTTCCCTTCTGCGTCTCTaGCAGTGCCGTGTGCCAGGCATGATTCTGCAATATCCAGGTTAT | + |
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Preference number: 5 (lower is better) Translates to: LAGISHRWTLSLLRL*QCRVPGMILQYPGY Trigger: ATAACCTGGATATTGCAGAATCATGCCTGGCACACGGCACTGGCAGAGACGCAGAAGGGAAAGTGTCCAGCGATGAGAGATACCGGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505443.1 |
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| CDS GCA 90 bp | CTCAAATGCTCACACCTTGGTGTCAAGGGGCATCGCTGTGCACACTaGACCTTCCAGATGCAACTGAGCGCTCCTCAGAGAACCAGTACT | + |
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Preference number: 5 (lower is better) Translates to: LKCSHLGVKGHRCAH*TFQMQLSAPQRTST Trigger: AGTACTGGTTCTCTGAGGAGCGCTCAGTTGCATCTGGAAGGTGCAGTGTGCACAGCGATGCCCCTTGACACCAAGGTGTGAGCATTTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505443.1 ENST00000662836.1 |
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| CDS CCA 90 bp | CCAACAGCACTAGAGGAGGCACTCTTATCTGACTTATCGGGAGTGTaGGTTGCTCCAGAGTCTCTCCTCACCACCACAGCCTCCTCAAGT | + |
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Preference number: 5 (lower is better) Translates to: PTALEEALLSDLSGV*VAPESLLTTTASSS Trigger: ACTTGAGGAGGCTGTGGTGGTGAGGAGAGACTCTGGAGCAACCCACACTCCCGATAAGTCAGATAAGAGTGCCTCCTCTAGTGCTGTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662836.1 |
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| CDS TCA 90 bp | GGACACTTTCCCTTCTGCGTCTCTGCCAGTGCCGTGTGCCAGGCATaGTTCTGCAATATCCAGGTTATTCAAGAAGGTCAGGGGCTTCCT | + |
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Preference number: 5 (lower is better) Translates to: GHFPFCVSASAVCQA*FCNIQVIQEGQGLP Trigger: AGGAAGCCCCTGACCTTCTTGAATAACCTGGATATTGCAGAATCATGCCTGGCACACGGCACTGGCAGAGACGCAGAAGGGAAAGTGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505443.1 |
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| CDS TCA 90 bp | CTGGCCCTACAGCACCATGATCTGGGGCTTTGGGCCTCCATGGTGTaGGAGAATAAATTCCTGTGGTTGAATCCCCTCTGTTCCAGCAAC | + |
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Preference number: 5 (lower is better) Translates to: LALQHHDLGLWASMV*ENKFLWLNPLCSSN Trigger: GTTGCTGGAACAGAGGGGATTCAACCACAGGAATTTATTCTCTCACACCATGGAGGCCCAAAGCCCCAGATCATGGTGCTGTAGGGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505443.1 |
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| CDS GCA 90 bp | TGTGGACCAACAGAAAGGACACGTTGGACATCTCAGGACGCCTGCTaGCTTCTTTGTGGGGGCCATTATCTTATCACTGAGGTGCTCCCA | + |
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Preference number: 5 (lower is better) Translates to: CGPTERTRWTSQDAC*LLCGGHYLITEVLP Trigger: TGGGAGCACCTCAGTGATAAGATAATGGCCCCCACAAAGAAGGCAGCAGGCGTCCTGAGATGTCCAACGTGTCCTTTCTGTTGGTCCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000662836.1 |
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| CDS GCA 90 bp | CAGAGAACCAGTACTTTCCGAAGCCGTACTAGTACAGAGAAGGAATaGCAGCAGGGACCCCTGCTCTGTATAGTTTCCAGGCAAAAGGGC | + |
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Preference number: 5 (lower is better) Translates to: QRTSTFRSRTSTEKE*QQGPLLCIVSRQKG Trigger: GCCCTTTTGCCTGGAAACTATACAGAGCAGGGGTCCCTGCTGGCATTCCTTCTCTGTACTAGTACGGCTTCGGAAAGTACTGGTTCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000505443.1 ENST00000662836.1 |
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| CDS GCA 90 bp | AAGTGTGGACCAACAGAAAGGACACGTTGGACATCTCAGGACGCCTaGTGCCTTCTTTGTGGGGGCCATTATCTTATCACTGAGGTGCTC | + |
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Preference number: 5 (lower is better) Translates to: KCGPTERTRWTSQDA*CLLCGGHYLITEVL Trigger: GAGCACCTCAGTGATAAGATAATGGCCCCCACAAAGAAGGCAGCAGGCGTCCTGAGATGTCCAACGTGTCCTTTCTGTTGGTCCACACTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000662836.1 |
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| CDS GCA 90 bp | GGTATCTCTCATCGCTGGACACTTTCCCTTCTGCGTCTCTGCCAGTaGCGTGTGCCAGGCATGATTCTGCAATATCCAGGTTATTCAAGA | + |
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Preference number: 5 (lower is better) Translates to: GISHRWTLSLLRLCQ*RVPGMILQYPGYSR Trigger: TCTTGAATAACCTGGATATTGCAGAATCATGCCTGGCACACGGCACTGGCAGAGACGCAGAAGGGAAAGTGTCCAGCGATGAGAGATACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505443.1 |
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| CDS CCA 90 bp | GCATCTCATGTCATCTTCACCATGATCCTGGAGGAAGGTAATTCCTaGTGGGCAATGGGATGCCTGAGGCCCAGAAAGTCGTGCAAATAC | + |
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Preference number: 5 (lower is better) Translates to: ASHVIFTMILEEGNS*WAMGCLRPRKSCKY Trigger: GTATTTGCACGACTTTCTGGGCCTCAGGCATCCCATTGCCCACCAGGAATTACCTTCCTCCAGGATCATGGTGAAGATGACATGAGATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505443.1 ENST00000662836.1 |
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| CDS TCA 90 bp | GAGCAGAGAGCGTCAACACAAATAATTCCAACTGGATCTGCAAAGTaGGTGCTGCAAGCTGAAGATTTGCCCCCTGGCCGGTATCTCTCA | + |
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Preference number: 5 (lower is better) Translates to: EQRASTQIIPTGSAK*VLQAEDLPPGRYLS Trigger: TGAGAGATACCGGCCAGGGGGCAAATCTTCAGCTTGCAGCACTCACTTTGCAGATCCAGTTGGAATTATTTGTGTTGACGCTCTCTGCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000505443.1 ENST00000662836.1 |
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| CDS TCA 90 bp | AACACAAATAATTCCAACTGGATCTGCAAAGTGAGTGCTGCAAGCTaGAGATTTGCCCCCTGGCCGGTATCTCTCATCGCTGGACACTTT | + |
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Preference number: 5 (lower is better) Translates to: NTNNSNWICKVSAAS*RFAPWPVSLIAGHF Trigger: AAAGTGTCCAGCGATGAGAGATACCGGCCAGGGGGCAAATCTTCAGCTTGCAGCACTCACTTTGCAGATCCAGTTGGAATTATTTGTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000505443.1 ENST00000662836.1 |
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| CDS GCA 90 bp | AACCCCCAGCATCTCAGAATGTGCTCTTATTTGGATACACAGTCTTaGAGATGTCATGAGTTCAGACGAGGTCCTGTTAGAGTAGGTGAG | + |
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Preference number: 5 (lower is better) Translates to: NPQHLRMCSYLDTQS*RCHEFRRGPVRVGE Trigger: CTCACCTACTCTAACAGGACCTCGTCTGAACTCATGACATCTGCAAGACTGTGTATCCAAATAAGAGCACATTCTGAGATGCTGGGGGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505443.1 |
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| CDS TCA 90 bp | ATAATGATCCCTGACTCCTGCAAAGGCTGCAGCATGAATGAGATATaGCTCCGCAGCAGCAAGTCGGTGCTTAAATTGAAATATTATGGG | + |
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Preference number: 5 (lower is better) Translates to: IMIPDSCKGCSMNEI*LRSSKSVLKLKYYG Trigger: CCCATAATATTTCAATTTAAGCACCGACTTGCTGCTGCGGAGTCATATCTCATTCATGCTGCAGCCTTTGCAGGAGTCAGGGATCATTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505443.1 ENST00000662836.1 |
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| CDS GCA 90 bp | CAGCGAGGCAATCAGTCATGGCTAAAGCTATTGTCTGGGCTTGCTTaGATGGTATATGAAGTAATCTGTCATCTCCCACGAAATTTATGC | + |
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Preference number: 5 (lower is better) Translates to: QRGNQSWLKLLSGLA*MVYEVICHLPRNLC Trigger: GCATAAATTTCGTGGGAGATGACAGATTACTTCATATACCATGCAAGCAAGCCCAGACAATAGCTTTAGCCATGACTGATTGCCTCGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662836.1 |
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| CDS TCA 90 bp | GAAACGGCCTCTGTCTTTGAGTCACACGTTGAGAGAATACCGTCATaGACTTCAACTGCATGCTTTCCAGGAAAGTGGAGAACTAAAAAT | + |
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Preference number: 5 (lower is better) Translates to: ETASVFESHVERIPS*TSTACFPGKWRTKN Trigger: ATTTTTAGTTCTCCACTTTCCTGGAAAGCATGCAGTTGAAGTTCATGACGGTATTCTCTCAACGTGTGACTCAAAGACAGAGGCCGTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000505443.1 ENST00000662836.1 |
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| CDS TCA 90 bp | CAACTATTCACATTAACAAATAAACAGGGCTTAGAGCAATCCACTTaGGAGGGCGTAATGACCCAAAGCCACCTAAGACCCAAACTCTCA | + |
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Preference number: 5 (lower is better) Translates to: QLFTLTNKQGLEQST*EGVMTQSHLRPKLS Trigger: TGAGAGTTTGGGTCTTAGGTGGCTTTGGGTCATTACGCCCTCTCAAGTGGATTGCTCTAAGCCCTGTTTATTTGTTAATGTGAATAGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505443.1 |
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| CDS GCA 90 bp | CCTTTGTATGAGAGATCAAGCCAAGGGGAGCTGAAATTCAGTGAATaGCGACCTTTGAAAGAGTTGAAAACACTTTGCACAGACGAGAAA | + |
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Preference number: 5 (lower is better) Translates to: PLYERSSQGELKFSE*RPLKELKTLCTDEK Trigger: TTTCTCGTCTGTGCAAAGTGTTTTCAACTCTTTCAAAGGTCGGCATTCACTGAATTTCAGCTCCCCTTGGCTTGATCTCTCATACAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505443.1 |
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| CDS GCA 90 bp | ACAAATCTTCTGTGCTTAAGTCCTAACCCCCAGCATCTCAGAATGTaGTCTTATTTGGATACACAGTCTTGCAGATGTCATGAGTTCAGA | + |
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Preference number: 5 (lower is better) Translates to: TNLLCLSPNPQHLRM*SYLDTQSCRCHEFR Trigger: TCTGAACTCATGACATCTGCAAGACTGTGTATCCAAATAAGAGCACATTCTGAGATGCTGGGGGTTAGGACTTAAGCACAGAAGATTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505443.1 |
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| CDS CCA 90 bp | AGAATGCATTTAACACAAAGTGGGTTACAGCGAGGCAATCAGTCATaGCTAAAGCTATTGTCTGGGCTTGCTTGCATGGTATATGAAGTA | + |
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Preference number: 5 (lower is better) Translates to: RMHLTQSGLQRGNQS*LKLLSGLACMVYEV Trigger: TACTTCATATACCATGCAAGCAAGCCCAGACAATAGCTTTAGCCATGACTGATTGCCTCGCTGTAACCCACTTTGTGTTAAATGCATTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662836.1 |
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| CDS CCA 90 bp | ATTACAGTGGTGGAATTGAACAGCAAGAATGCATTTAACACAAAGTaGGTTACAGCGAGGCAATCAGTCATGGCTAAAGCTATTGTCTGG | + |
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Preference number: 5 (lower is better) Translates to: ITVVELNSKNAFNTK*VTARQSVMAKAIVW Trigger: CCAGACAATAGCTTTAGCCATGACTGATTGCCTCGCTGTAACCCACTTTGTGTTAAATGCATTCTTGCTGTTCAATTCCACCACTGTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662836.1 |
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| CDS GCA 72 bp | CAGGGAGCGCGGTGCCTGCCCTCCACGGCGGCCGCCTaGGGGGAACAGGGCAGCGTCCAGCAGGCGGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: QGARCLPSTAAA*GEQGSVQQAEG Trigger: GCCTTCCGCCTGCTGGACGCTGCCCTGTTCCCCGCAGGCGGCCGCCGTGGAGGGCAGGCACCGCGCTCCCTG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505443.1 |
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| CDS GCA 72 bp | CTCGAGGTCTGGGTTTCGGCCCCATGGCCGTGGCTGTaGTTGGAAGGCCCCGGGAGCAGCCAGGGAGCGCGG | + |
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Preference number: 6 (lower is better) Translates to: LEVWVSAPWPWL*LEGPGSSQGAR Trigger: CCGCGCTCCCTGGCTGCTCCCGGGGCCTTCCAAGCACAGCCACGGCCATGGGGCCGAAACCCAGACCTCGAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505443.1 |
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| CDS TCA 72 bp | CCGCACTGTCCGGAGGCCCCTCCAGACTCTCCGAGGTaGCCCCATGCCCAGGCACCTCTGAGGGCACCATCC | + |
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Preference number: 6 (lower is better) Translates to: PHCPEAPPDSPR*PHAQAPLRAPS Trigger: GGATGGTGCCCTCAGAGGTGCCTGGGCATGGGGTCACCTCGGAGAGTCTGGAGGGGCCTCCGGACAGTGCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505443.1 |
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| CDS GCA 72 bp | AGCCTGGTGCTAGGGCGCATCTCCCCCGGCGCCCTCTaGTGCTCACTTCAGCTCCTGGACAGCTGCGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: SLVLGRISPGAL*CSLQLLDSCGL Trigger: GAGGCCGCAGCTGTCCAGGAGCTGAAGTGAGCAGCAGAGGGCGCCGGGGGAGATGCGCCCTAGCACCAGGCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505443.1 |
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| CDS GCA 72 bp | TCCGGAGGCCCCTCCAGACTCTCCGAGGTGACCCCATaGCCAGGCACCTCTGAGGGCACCATCCAGGGCGAG | + |
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Preference number: 6 (lower is better) Translates to: SGGPSRLSEVTP*PGTSEGTIQGE Trigger: CTCGCCCTGGATGGTGCCCTCAGAGGTGCCTGGGCATGGGGTCACCTCGGAGAGTCTGGAGGGGCCTCCGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505443.1 |
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| CDS GCA 72 bp | GTCAGCTGGGGACTAGCAGGAGCTCTAATCTCGCGCTaGGTCAGGGCGGGAACTGCAAGAGGCCGCCCCCGG | + |
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Preference number: 6 (lower is better) Translates to: VSWGLAGALISR*VRAGTARGRPR Trigger: CCGGGGGCGGCCTCTTGCAGTTCCCGCCCTGACGCAGCGCGAGATTAGAGCTCCTGCTAGTCCCCAGCTGAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000505443.1 |
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| CDS CCA 72 bp | GCCCAGGCACCTCTGAGGGCACCATCCAGGGCGAGCTaGATGGTGGGAGCCTCCTGGACAGGTAGACCCTCC | + |
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Preference number: 6 (lower is better) Translates to: AQAPLRAPSRAS*MVGASWTGRPS Trigger: GGAGGGTCTACCTGTCCAGGAGGCTCCCACCATCCAGCTCGCCCTGGATGGTGCCCTCAGAGGTGCCTGGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505443.1 |
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| CDS CAA 72 bp | GGGCAGCTCCAGCCCCTTCCACGCTCAGCTGCTGCCTaGTGGGGCCGTGCACAGGTTTCTCCAGTGAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: GQLQPLPRSAAA*WGRAQVSPVRP Trigger: TGGCCTCACTGGAGAAACCTGTGCACGGCCCCACAAGGCAGCAGCTGAGCGTGGAAGGGGCTGGAGCTGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505443.1 |
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| CDS TCA 72 bp | TGGGAGCCTCCTGGACAGGTAGACCCTCCCCTGGGCTaGGGCTTCATATGGACTCCAGGCCCGGGTTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: WEPPGQVDPPLG*GFIWTPGPGSQ Trigger: CTGGGAACCCGGGCCTGGAGTCCATATGAAGCCTCAGCCCAGGGGAGGGTCTACCTGTCCAGGAGGCTCCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505443.1 |
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| CDS GCA 72 bp | TTTCCCTTCAGTGTAGCAGCTGGGCTTGTCGAGCTCTaGCCGCAGGCCCCTCGAGGTCTGGGTTTCGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: FPFSVAAGLVEL*PQAPRGLGFGP Trigger: GGGGCCGAAACCCAGACCTCGAGGGGCCTGCGGGCAGAGCTCGACAAGCCCAGCTGCTACACTGAAGGGAAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505443.1 |
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| CDS GCA 72 bp | GCCCTCGTGGTCCCACCCAGTGATGACAAAGGCAGATaGTGCTGCTGGCCACACGGCCCCTTCCCTACCACG | + |
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Preference number: 6 (lower is better) Translates to: ALVVPPSDDKGR*CCWPHGPFPTT Trigger: CGTGGTAGGGAAGGGGCCGTGTGGCCAGCAGCAGCATCTGCCTTTGTCATCACTGGGTGGGACCACGAGGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505443.1 |
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| CDS CCA 72 bp | GGGCACAGGTCCTCCCTAGTGCCCTCAGAGGGAGCCTaGCCCTACAGCACCATGATCTGGGGCTTTGGGCCT | + |
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Preference number: 6 (lower is better) Translates to: GHRSSLVPSEGA*PYSTMIWGFGP Trigger: AGGCCCAAAGCCCCAGATCATGGTGCTGTAGGGCCAGGCTCCCTCTGAGGGCACTAGGGAGGACCTGTGCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505443.1 |
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| CDS GCA 72 bp | GGGCAGCACGGGCTGGCCAGCCTCCCTACTCAGGTGTaGATTCCCATGCAGAGAGAGAAGCCATGTGGCATG | + |
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Preference number: 6 (lower is better) Translates to: GQHGLASLPTQV*IPMQREKPCGM Trigger: CATGCCACATGGCTTCTCTCTCTGCATGGGAATGCACACCTGAGTAGGGAGGCTGGCCAGCCCGTGCTGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505443.1 |
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| CDS CCA 72 bp | ACAGACTTTCGCTCCTGGGTCAGAAGCCCTGGCTCCTaGGCAGTGTGGAAGCTGCCCCATTCTCCAGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: TDFRSWVRSPGS*AVWKLPHSPEQ Trigger: CTGCTCTGGAGAATGGGGCAGCTTCCACACTGCCCAGGAGCCAGGGCTTCTGACCCAGGAGCGAAAGTCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505443.1 ENST00000662836.1 |
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| CDS CCA 72 bp | GTTCCCAGTGAGGAAAGTCAAGGCAAGGAAGCTCGCTaGGGCACTCAGAGCCTGGTGCTAGGGCGCATCTCC | + |
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Preference number: 6 (lower is better) Translates to: VPSEESQGKEAR*GTQSLVLGRIS Trigger: GGAGATGCGCCCTAGCACCAGGCTCTGAGTGCCCCAGCGAGCTTCCTTGCCTTGACTTTCCTCACTGGGAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505443.1 |
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| CDS CCA 72 bp | CGCGGCACAGGACCCTCCAGGGTGGGCACTATTCCATaGAGAACCTTCCAGCACAGCTCAAATGCTCACACC | + |
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Preference number: 6 (lower is better) Translates to: RGTGPSRVGTIP*RTFQHSSNAHT Trigger: GGTGTGAGCATTTGAGCTGTGCTGGAAGGTTCTCCATGGAATAGTGCCCACCCTGGAGGGTCCTGTGCCGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505443.1 ENST00000662836.1 |
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| CDS TCA 72 bp | GGCATCGCTGTGCACACTGCACCTTCCAGATGCAACTaGGCGCTCCTCAGAGAACCAGTACTTTCCGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: GIAVHTAPSRCN*ALLREPVLSEA Trigger: GGCTTCGGAAAGTACTGGTTCTCTGAGGAGCGCTCAGTTGCATCTGGAAGGTGCAGTGTGCACAGCGATGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505443.1 ENST00000662836.1 |
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| CDS GCA 72 bp | TCACACCTTGGTGTCAAGGGGCATCGCTGTGCACACTaGACCTTCCAGATGCAACTGAGCGCTCCTCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: SHLGVKGHRCAH*TFQMQLSAPQR Trigger: TCTCTGAGGAGCGCTCAGTTGCATCTGGAAGGTGCAGTGTGCACAGCGATGCCCCTTGACACCAAGGTGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505443.1 ENST00000662836.1 |
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| CDS GCA 72 bp | CAAATGCTCACACCTTGGTGTCAAGGGGCATCGCTGTaGACACTGCACCTTCCAGATGCAACTGAGCGCTCC | + |
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Preference number: 6 (lower is better) Translates to: QMLTPWCQGASL*TLHLPDATERS Trigger: GGAGCGCTCAGTTGCATCTGGAAGGTGCAGTGTGCACAGCGATGCCCCTTGACACCAAGGTGTGAGCATTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505443.1 ENST00000662836.1 |
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| CDS CCA 72 bp | CCCTCAGAGGGAGCCTGGCCCTACAGCACCATGATCTaGGGCTTTGGGCCTCCATGGTGTGAGAGAATAAAT | + |
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Preference number: 6 (lower is better) Translates to: PSEGAWPYSTMI*GFGPPWCERIN Trigger: ATTTATTCTCTCACACCATGGAGGCCCAAAGCCCCAGATCATGGTGCTGTAGGGCCAGGCTCCCTCTGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505443.1 |
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| CDS GCA 72 bp | CACCTCCGGCCTATACCCACACACGTCTTTCCACCCTaGCATGGCTATCCACCTTCCAGATGGATTGAACTG | + |
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Preference number: 6 (lower is better) Translates to: HLRPIPTHVFPP*HGYPPSRWIEL Trigger: CAGTTCAATCCATCTGGAAGGTGGATAGCCATGGCAGGGTGGAAAGACGTGTGTGGGTATAGGCCGGAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505443.1 |
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| CDS CCA 72 bp | GAAGCTGCAGAATGGGGCAGTGTGAGAACCGGTGGATaGGAAACGGCCTCTGTCTTTGAGTCACACGTTGAG | + |
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Preference number: 6 (lower is better) Translates to: EAAEWGSVRTGG*ETASVFESHVE Trigger: CTCAACGTGTGACTCAAAGACAGAGGCCGTTTCCCATCCACCGGTTCTCACACTGCCCCATTCTGCAGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505443.1 ENST00000662836.1 |
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| CDS CCA 72 bp | CTAGAGGAGGCACTCTTATCTGACTTATCGGGAGTGTaGGTTGCTCCAGAGTCTCTCCTCACCACCACAGCC | + |
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Preference number: 6 (lower is better) Translates to: LEEALLSDLSGV*VAPESLLTTTA Trigger: GGCTGTGGTGGTGAGGAGAGACTCTGGAGCAACCCACACTCCCGATAAGTCAGATAAGAGTGCCTCCTCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505443.1 ENST00000662836.1 |
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| CDS CAA 72 bp | AGGAGGCACTCTTATCTGACTTATCGGGAGTGTGGGTaGCTCCAGAGTCTCTCCTCACCACCACAGCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: RRHSYLTYRECG*LQSLSSPPQPP Trigger: AGGAGGCTGTGGTGGTGAGGAGAGACTCTGGAGCAACCCACACTCCCGATAAGTCAGATAAGAGTGCCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505443.1 ENST00000662836.1 |
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| CDS GCA 72 bp | ATCCTGGAGGAAGGTAATTCCTGGTGGGCAATGGGATaGCTGAGGCCCAGAAAGTCGTGCAAATACTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: ILEEGNSWWAMG*LRPRKSCKYCQ Trigger: CTGGCAGTATTTGCACGACTTTCTGGGCCTCAGGCATCCCATTGCCCACCAGGAATTACCTTCCTCCAGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505443.1 ENST00000662836.1 |
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| CDS CCA 72 bp | ATCTTCACCATGATCCTGGAGGAAGGTAATTCCTGGTaGGCAATGGGATGCCTGAGGCCCAGAAAGTCGTGC | + |
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Preference number: 6 (lower is better) Translates to: IFTMILEEGNSW*AMGCLRPRKSC Trigger: GCACGACTTTCTGGGCCTCAGGCATCCCATTGCCCACCAGGAATTACCTTCCTCCAGGATCATGGTGAAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505443.1 ENST00000662836.1 |
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| CDS CAA 72 bp | AACTTGCCTGTAGAAGGTGTGAGGGGAAGAGTAGCATaGCCCTCGTGGTCCCACCCAGTGATGACAAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: NLPVEGVRGRVA*PSWSHPVMTKA Trigger: TGCCTTTGTCATCACTGGGTGGGACCACGAGGGCAATGCTACTCTTCCCCTCACACCTTCTACAGGCAAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505443.1 |
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| CDS TCA 72 bp | CCCTTCTGCGTCTCTGCCAGTGCCGTGTGCCAGGCATaGTTCTGCAATATCCAGGTTATTCAAGAAGGTCAG | + |
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Preference number: 6 (lower is better) Translates to: PFCVSASAVCQA*FCNIQVIQEGQ Trigger: CTGACCTTCTTGAATAACCTGGATATTGCAGAATCATGCCTGGCACACGGCACTGGCAGAGACGCAGAAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505443.1 |
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| CDS GCA 72 bp | CACTATTCCATGGAGAACCTTCCAGCACAGCTCAAATaGTCACACCTTGGTGTCAAGGGGCATCGCTGTGCA | + |
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Preference number: 6 (lower is better) Translates to: HYSMENLPAQLK*SHLGVKGHRCA Trigger: TGCACAGCGATGCCCCTTGACACCAAGGTGTGAGCATTTGAGCTGTGCTGGAAGGTTCTCCATGGAATAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505443.1 ENST00000662836.1 |
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| CDS GCA 72 bp | GGAAAATTGGACACATCCACACACATAAAGGGAGAGTaGCACGTGAAGGTACAAGCTGTGCTGCCACGAGCC | + |
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Preference number: 6 (lower is better) Translates to: GKLDTSTHIKGE*HVKVQAVLPRA Trigger: GGCTCGTGGCAGCACAGCTTGTACCTTCACGTGGCACTCTCCCTTTATGTGTGTGGATGTGTCCAATTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505443.1 |
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| CDS GCA 72 bp | AGTACTTTCCGAAGCCGTACTAGTACAGAGAAGGAATaGCAGCAGGGACCCCTGCTCTGTATAGTTTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: STFRSRTSTEKE*QQGPLLCIVSR Trigger: CCTGGAAACTATACAGAGCAGGGGTCCCTGCTGGCATTCCTTCTCTGTACTAGTACGGCTTCGGAAAGTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505443.1 ENST00000662836.1 |
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| CDS GCA 72 bp | ACAGAAAGGACACGTTGGACATCTCAGGACGCCTGCTaGCTTCTTTGTGGGGGCCATTATCTTATCACTGAG | + |
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Preference number: 6 (lower is better) Translates to: TERTRWTSQDAC*LLCGGHYLITE Trigger: CTCAGTGATAAGATAATGGCCCCCACAAAGAAGGCAGCAGGCGTCCTGAGATGTCCAACGTGTCCTTTCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000662836.1 |
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| CDS GCA 72 bp | CCAACAGAAAGGACACGTTGGACATCTCAGGACGCCTaGTGCCTTCTTTGTGGGGGCCATTATCTTATCACT | + |
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Preference number: 6 (lower is better) Translates to: PTERTRWTSQDA*CLLCGGHYLIT Trigger: AGTGATAAGATAATGGCCCCCACAAAGAAGGCAGCAGGCGTCCTGAGATGTCCAACGTGTCCTTTCTGTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000662836.1 |
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| CDS CAA 72 bp | GTGGATGGGAAACGGCCTCTGTCTTTGAGTCACACGTaGAGAGAATACCGTCATGAACTTCAACTGCATGCT | + |
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Preference number: 6 (lower is better) Translates to: VDGKRPLSLSHT*REYRHELQLHA Trigger: AGCATGCAGTTGAAGTTCATGACGGTATTCTCTCAACGTGTGACTCAAAGACAGAGGCCGTTTCCCATCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505443.1 ENST00000662836.1 |
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| CDS CAA 90 bp | GCAGAGGGCCGGGGAATGCAGAAGAACAAAATTACAGTGGTGGAATaGAACAGCAAGAATGCATTTAACACAAAGTGGGTTACAGCGAGG | + |
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Preference number: 6 (lower is better) Translates to: AEGRGMQKNKITVVE*NSKNAFNTKWVTAR Trigger: CCTCGCTGTAACCCACTTTGTGTTAAATGCATTCTTGCTGTTCAATTCCACCACTGTAATTTTGTTCTTCTGCATTCCCCGGCCCTCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662836.1 |
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| CDS TCA 72 bp | AGATATGACTCCGCAGCAGCAAGTCGGTGCTTAAATTaGAATATTATGGGAAGGGCAGCCCACTGCAGACTT | + |
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Preference number: 6 (lower is better) Translates to: RYDSAAASRCLN*NIMGRAAHCRL Trigger: AAGTCTGCAGTGGGCTGCCCTTCCCATAATATTTCAATTTAAGCACCGACTTGCTGCTGCGGAGTCATATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505443.1 ENST00000662836.1 |
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| CDS TCA 72 bp | TGCAACATAAACTTACCTAGAGGAGGCACTCTTATCTaGCTTATCGGGAGTGTGGGTTGCTCCAGAGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: CNINLPRGGTLI*LIGSVGCSRVS Trigger: AGAGACTCTGGAGCAACCCACACTCCCGATAAGTCAGATAAGAGTGCCTCCTCTAGGTAAGTTTATGTTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505443.1 |
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| CDS TCA 72 bp | ACATTAACAAATAAACAGGGCTTAGAGCAATCCACTTaGGAGGGCGTAATGACCCAAAGCCACCTAAGACCC | + |
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Preference number: 6 (lower is better) Translates to: TLTNKQGLEQST*EGVMTQSHLRP Trigger: GGGTCTTAGGTGGCTTTGGGTCATTACGCCCTCTCAAGTGGATTGCTCTAAGCCCTGTTTATTTGTTAATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505443.1 |
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| CDS GCA 72 bp | TTTGCACAGACGAGAAAACATACAGAAGATCTCAGATaGTTCCTCTGCGTCAGGCTCTTCTCTGAATTCAGG | + |
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Preference number: 6 (lower is better) Translates to: FAQTRKHTEDLR*FLCVRLFSEFR Trigger: CCTGAATTCAGAGAAGAGCCTGACGCAGAGGAAGCATCTGAGATCTTCTGTATGTTTTCTCGTCTGTGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505443.1 |
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| CDS CCA 72 bp | GTCCTAACCCCCAGCATCTCAGAATGTGCTCTTATTTaGATACACAGTCTTGCAGATGTCATGAGTTCAGAC | + |
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Preference number: 6 (lower is better) Translates to: VLTPSISECALI*IHSLADVMSSD Trigger: GTCTGAACTCATGACATCTGCAAGACTGTGTATCCAAATAAGAGCACATTCTGAGATGCTGGGGGTTAGGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505443.1 |
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| CDS CCA 72 bp | TTAACACAAAGTGGGTTACAGCGAGGCAATCAGTCATaGCTAAAGCTATTGTCTGGGCTTGCTTGCATGGTA | + |
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Preference number: 6 (lower is better) Translates to: LTQSGLQRGNQS*LKLLSGLACMV Trigger: TACCATGCAAGCAAGCCCAGACAATAGCTTTAGCCATGACTGATTGCCTCGCTGTAACCCACTTTGTGTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662836.1 |
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| CDS CAA 72 bp | GGGTTACAGCGAGGCAATCAGTCATGGCTAAAGCTATaGTCTGGGCTTGCTTGCATGGTATATGAAGTAATC | + |
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Preference number: 6 (lower is better) Translates to: GLQRGNQSWLKL*SGLACMVYEVI Trigger: GATTACTTCATATACCATGCAAGCAAGCCCAGACAATAGCTTTAGCCATGACTGATTGCCTCGCTGTAACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662836.1 |
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| CDS CAA 90 bp | ACACAAAGTGGGTTACAGCGAGGCAATCAGTCATGGCTAAAGCTATaGTCTGGGCTTGCTTGCATGGTATATGAAGTAATCTGTCATCTC | + |
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Preference number: 6 (lower is better) Translates to: TQSGLQRGNQSWLKL*SGLACMVYEVICHL Trigger: GAGATGACAGATTACTTCATATACCATGCAAGCAAGCCCAGACAATAGCTTTAGCCATGACTGATTGCCTCGCTGTAACCCACTTTGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662836.1 |
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| CDS TCA 72 bp | TCTGTCTTTGAGTCACACGTTGAGAGAATACCGTCATaGACTTCAACTGCATGCTTTCCAGGAAAGTGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SVFESHVERIPS*TSTACFPGKWR Trigger: TCTCCACTTTCCTGGAAAGCATGCAGTTGAAGTTCATGACGGTATTCTCTCAACGTGTGACTCAAAGACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505443.1 ENST00000662836.1 |
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| CDS GCA 72 bp | CTGTGCTTAAGTCCTAACCCCCAGCATCTCAGAATGTaGTCTTATTTGGATACACAGTCTTGCAGATGTCAT | + |
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Preference number: 6 (lower is better) Translates to: LCLSPNPQHLRM*SYLDTQSCRCH Trigger: ATGACATCTGCAAGACTGTGTATCCAAATAAGAGCACATTCTGAGATGCTGGGGGTTAGGACTTAAGCACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000505443.1 |
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| CDS CAA 72 bp | AGCCAAGGGGAGCTGAAATTCAGTGAATGCCGACCTTaGAAAGAGTTGAAAACACTTTGCACAGACGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: SQGELKFSECRP*KELKTLCTDEK Trigger: TTTCTCGTCTGTGCAAAGTGTTTTCAACTCTTTCAAAGGTCGGCATTCACTGAATTTCAGCTCCCCTTGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505443.1 |
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| CDS GCA 72 bp | CATCTCAGAATGTGCTCTTATTTGGATACACAGTCTTaGAGATGTCATGAGTTCAGACGAGGTCCTGTTAGA | + |
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Preference number: 6 (lower is better) Translates to: HLRMCSYLDTQS*RCHEFRRGPVR Trigger: TCTAACAGGACCTCGTCTGAACTCATGACATCTGCAAGACTGTGTATCCAAATAAGAGCACATTCTGAGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000505443.1 |
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| CDS CCA 72 bp | GTGGAATTGAACAGCAAGAATGCATTTAACACAAAGTaGGTTACAGCGAGGCAATCAGTCATGGCTAAAGCT | + |
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Preference number: 6 (lower is better) Translates to: VELNSKNAFNTK*VTARQSVMAKA Trigger: AGCTTTAGCCATGACTGATTGCCTCGCTGTAACCCACTTTGTGTTAAATGCATTCTTGCTGTTCAATTCCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662836.1 |
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| CDS CCA 72 bp | CTGCTCTGTATAGTTTCCAGGCAAAAGGGCACAAGATaGGGAAACATATTCATTCTTGAGTTTTCTGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: LLCIVSRQKGTR*GNIFILEFSVH Trigger: ATGGACAGAAAACTCAAGAATGAATATGTTTCCCCATCTTGTGCCCTTTTGCCTGGAAACTATACAGAGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000505443.1 ENST00000662836.1 |
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| CDS TCA 72 bp | GCTAAAGCTATTGTCTGGGCTTGCTTGCATGGTATATaGAGTAATCTGTCATCTCCCACGAAATTTATGCTT | + |
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Preference number: 6 (lower is better) Translates to: AKAIVWACLHGI*SNLSSPTKFML Trigger: AAGCATAAATTTCGTGGGAGATGACAGATTACTTCATATACCATGCAAGCAAGCCCAGACAATAGCTTTAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662836.1 |
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| CDS CAA 72 bp | GAGCTGAAATTCAGTGAATGCCGACCTTTGAAAGAGTaGAAAACACTTTGCACAGACGAGAAAACATACAGA | + |
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Preference number: 6 (lower is better) Translates to: ELKFSECRPLKE*KTLCTDEKTYR Trigger: TCTGTATGTTTTCTCGTCTGTGCAAAGTGTTTTCAACTCTTTCAAAGGTCGGCATTCACTGAATTTCAGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000505443.1 |
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| CDS CAA 72 bp | CGGGGAATGCAGAAGAACAAAATTACAGTGGTGGAATaGAACAGCAAGAATGCATTTAACACAAAGTGGGTT | + |
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Preference number: 6 (lower is better) Translates to: RGMQKNKITVVE*NSKNAFNTKWV Trigger: AACCCACTTTGTGTTAAATGCATTCTTGCTGTTCAATTCCACCACTGTAATTTTGTTCTTCTGCATTCCCCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662836.1 |
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