Pregenerated sensors for LINC01017 (Homo sapiens)

Ensembl gene IDs: ENSG00000250716

Ensembl transcript IDs: ENST00000508823.1

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	TGGGATGAAAGTCCACAAGTATGGCAGAGATTGATGAATGAACTGTaGGGTCCAGGCTTTGGAGTCACACAACTTCCTATGAGCAGACTG	+
Preference number: 5 (lower is better) Translates to: WDESPQVWQRLMNEL*GPGFGVTQLPMSRL Trigger: CAGTCTGCTCATAGGAAGTTGTGTGACTCCAAAGCCTGGACCTCACAGTTCATTCATCAATCTCTGCCATACTTGTGGACTTTCATCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508823.1
CDS TCA 90 bp	TTTGGAGTCACACAACTTCCTATGAGCAGACTGGACAGTCCTCGCTaGTATATCAGGGTATGTAGTTGTATCCAGAGAAGACACTCCAAG	+
Preference number: 5 (lower is better) Translates to: FGVTQLPMSRLDSPR*YIRVCSCIQRRHSK Trigger: CTTGGAGTGTCTTCTCTGGATACAACTACATACCCTGATATATCAGCGAGGACTGTCCAGTCTGCTCATAGGAAGTTGTGTGACTCCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508823.1
CDS TCA 90 bp	AACACAGTTATTTCTTGGGATACTCTTGAGCACTGCCGAATACTATaGCATGAATATCATGGTGGGATGAAAGTCCACAAGTATGGCAGA	+
Preference number: 5 (lower is better) Translates to: NTVISWDTLEHCRIL*HEYHGGMKVHKYGR Trigger: TCTGCCATACTTGTGGACTTTCATCCCACCATGATATTCATGTCATAGTATTCGGCAGTGCTCAAGAGTATCCCAAGAAATAACTGTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508823.1
CDS TCA 72 bp	TGTGAGGTCCAGGCTTTGGAGTCACACAACTTCCTATaGGCAGACTGGACAGTCCTCGCTGATATATCAGGG	+
Preference number: 6 (lower is better) Translates to: CEVQALESHNFL*ADWTVLADISG Trigger: CCCTGATATATCAGCGAGGACTGTCCAGTCTGCTCATAGGAAGTTGTGTGACTCCAAAGCCTGGACCTCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508823.1
CDS CCA 72 bp	ACCGCAAGACAACTCATAGCAAAATGTACGAAAGCCTaGGAGGTGGAGGTTGCAGTTGCCCCATTGCACTCT	+
Preference number: 6 (lower is better) Translates to: TARQLIAKCTKA*EVEVAVAPLHS Trigger: AGAGTGCAATGGGGCAACTGCAACCTCCACCTCCCAGGCTTTCGTACATTTTGCTATGAGTTGTCTTGCGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000508823.1
CDS TCA 72 bp	AGTCCACAAGTATGGCAGAGATTGATGAATGAACTGTaGGGTCCAGGCTTTGGAGTCACACAACTTCCTATG	+
Preference number: 6 (lower is better) Translates to: SPQVWQRLMNEL*GPGFGVTQLPM Trigger: CATAGGAAGTTGTGTGACTCCAAAGCCTGGACCTCACAGTTCATTCATCAATCTCTGCCATACTTGTGGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508823.1
CDS TCA 72 bp	ATTTCTTGGGATACTCTTGAGCACTGCCGAATACTATaGCATGAATATCATGGTGGGATGAAAGTCCACAAG	+
Preference number: 6 (lower is better) Translates to: ISWDTLEHCRIL*HEYHGGMKVHK Trigger: CTTGTGGACTTTCATCCCACCATGATATTCATGTCATAGTATTCGGCAGTGCTCAAGAGTATCCCAAGAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508823.1

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