Pregenerated sensors for LINC01013 (Homo sapiens)
Ensembl gene IDs: ENSG00000228495Ensembl transcript IDs: ENST00000422700.1, ENST00000436112.1, ENST00000443303.2, ENST00000447481.1, ENST00000458028.1, ENST00000653266.1, ENST00000654106.1, ENST00000654779.1, ENST00000655558.1, ENST00000655844.1, ENST00000656169.1, ENST00000657473.1, ENST00000658258.1, ENST00000658894.1, ENST00000660058.1, ENST00000660563.1, ENST00000660939.1, ENST00000661099.1, ENST00000661280.1, ENST00000662166.1, ENST00000662967.1, ENST00000663205.1, ENST00000664107.1, ENST00000664113.1, ENST00000665843.1, ENST00000666171.1, ENST00000666560.1, ENST00000667512.1, ENST00000667763.1, ENST00000668744.1, ENST00000669240.1, ENST00000669461.1, ENST00000669653.1, ENST00000670122.1
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCCCGAAAGAGGAGGTCAGCCCAGATGGTGCTCATTTCATATGGGTaGGGTGGGGCCTATCTTGTGAAGTCACCAAGTCACCTCATGAAG | + |
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Preference number: 5 (lower is better) Translates to: PRKRRSAQMVLISYG*GGAYLVKSPSHLMK Trigger: CTTCATGAGGTGACTTGGTGACTTCACAAGATAGGCCCCACCCCACCCATATGAAATGAGCACCATCTGGGCTGACCTCCTCTTTCGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000422700.1 |
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| CDS CCA 90 bp | CCAAGGCAAGCACTTCTGTTGAGCATCCAAGACCATGGATGTCTGTaGCATTTCCCTTCACCCCAGGGAGTCTCAGGTCTTTTTGGCCTG | + |
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Preference number: 5 (lower is better) Translates to: PRQALLLSIQDHGCL*HFPSPQGVSGLFGL Trigger: CAGGCCAAAAAGACCTGAGACTCCCTGGGGTGAAGGGAAATGCCACAGACATCCATGGTCTTGGATGCTCAACAGAAGTGCTTGCCTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000655558.1 ENST00000665843.1 |
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| CDS CCA 90 bp | CCATCATACCCCACATCAATCAGACTTCAGGTGCAGCCTGCGCTCTaGAGGAGGAAAGATCTTGGGCAATGTGCCTCTTTTCAGAAGAGG | + |
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Preference number: 5 (lower is better) Translates to: PSYPTSIRLQVQPAL*RRKDLGQCASFQKR Trigger: CCTCTTCTGAAAAGAGGCACATTGCCCAAGATCTTTCCTCCTCCAGAGCGCAGGCTGCACCTGAAGTCTGATTGATGTGGGGTATGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000447481.1 ENST00000658258.1 ENST00000660939.1 ENST00000661099.1 ENST00000665843.1 ENST00000668744.1 ENST00000670122.1 |
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| CDS GCA 90 bp | TTGGCCTTTGTAGATTGGTTGAACCCACATCAATCAGACTTCAGGTaGAGCCTGCGCTCTGGAGGAGGAAAGATCTTGGGCAATGTGCCT | + |
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Preference number: 5 (lower is better) Translates to: LAFVDWLNPHQSDFR*SLRSGGGKILGNVP Trigger: AGGCACATTGCCCAAGATCTTTCCTCCTCCAGAGCGCAGGCTGCACCTGAAGTCTGATTGATGTGGGTTCAACCAATCTACAAAGGCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660058.1 |
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| CDS CCA 90 bp | AAAGAGGAGGTCAGCCCAGATGGTGCTCATTTCATATGGGTGGGGTaGGGCCTATCTTGTGAAGTCACCAAGTCACCTCATGAAGAAGTG | + |
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Preference number: 5 (lower is better) Translates to: KEEVSPDGAHFIWVG*GLSCEVTKSPHEEV Trigger: CACTTCTTCATGAGGTGACTTGGTGACTTCACAAGATAGGCCCCACCCCACCCATATGAAATGAGCACCATCTGGGCTGACCTCCTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422700.1 |
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| CDS CCA 90 bp | AGATGGAGAACGCTGTGCCGTTGCCTTTGCACATCTTCCAGACAGTaGAGAATGCGTTTAGGGGCAGCAGATTGGAGTTCATCTTTTGGG | + |
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Preference number: 5 (lower is better) Translates to: RWRTLCRCLCTSSRQ*RMRLGAADWSSSFG Trigger: CCCAAAAGATGAACTCCAATCTGCTGCCCCTAAACGCATTCTCCACTGTCTGGAAGATGTGCAAAGGCAACGGCACAGCGTTCTCCATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 16 transcripts: ENST00000436112.1 ENST00000443303.2 ENST00000653266.1 ENST00000655558.1 ENST00000655844.1 ENST00000656169.1 ENST00000658894.1 ENST00000660058.1 ENST00000660563.1 ENST00000661280.1 ENST00000662166.1 ENST00000662967.1 ENST00000664113.1 ENST00000666171.1 ENST00000669240.1 ENST00000669461.1 |
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| CDS CCA 90 bp | TTGGTTGAACCCACATCAATCAGACTTCAGGTGCAGCCTGCGCTCTaGAGGAGGAAAGATCTTGGGCAATGTGCCTCTTTTCAGAAGAGG | + |
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Preference number: 5 (lower is better) Translates to: LVEPTSIRLQVQPAL*RRKDLGQCASFQKR Trigger: CCTCTTCTGAAAAGAGGCACATTGCCCAAGATCTTTCCTCCTCCAGAGCGCAGGCTGCACCTGAAGTCTGATTGATGTGGGTTCAACCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660058.1 |
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| CDS GCA 90 bp | AGCACTTTGAAGGATTTGAGATGGAGAACGCTGTGCCGTTGCCTTTaGACATCTTCCAGACAGTGGAGAATGCGTTTAGGGGCAGCAGAT | + |
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Preference number: 5 (lower is better) Translates to: STLKDLRWRTLCRCL*TSSRQWRMRLGAAD Trigger: ATCTGCTGCCCCTAAACGCATTCTCCACTGTCTGGAAGATGTGCAAAGGCAACGGCACAGCGTTCTCCATCTCAAATCCTTCAAAGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000436112.1 ENST00000443303.2 ENST00000653266.1 ENST00000655558.1 ENST00000655844.1 ENST00000656169.1 ENST00000658894.1 ENST00000660058.1 ENST00000660563.1 ENST00000661280.1 ENST00000662166.1 ENST00000662967.1 ENST00000664113.1 ENST00000666171.1 ENST00000669240.1 ENST00000669461.1 |
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| CDS GCA 90 bp | TCTGACAGCACTTTGAAGGATTTGAGATGGAGAACGCTGTGCCGTTaGCTTTGCACATCTTCCAGACAGTGGAGAATGCGTTTAGGGGCA | + |
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Preference number: 5 (lower is better) Translates to: SDSTLKDLRWRTLCR*LCTSSRQWRMRLGA Trigger: TGCCCCTAAACGCATTCTCCACTGTCTGGAAGATGTGCAAAGGCAACGGCACAGCGTTCTCCATCTCAAATCCTTCAAAGTGCTGTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000436112.1 ENST00000443303.2 ENST00000653266.1 ENST00000655558.1 ENST00000655844.1 ENST00000656169.1 ENST00000658894.1 ENST00000660058.1 ENST00000660563.1 ENST00000661280.1 ENST00000662166.1 ENST00000662967.1 ENST00000664113.1 ENST00000666171.1 ENST00000669240.1 ENST00000669461.1 |
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| CDS CCA 90 bp | ATTAACAACCCCACATCAATCAGACTTCAGGTGCAGCCTGCGCTCTaGAGGAGGAAAGATCTTGGGCAATGTGCCTCTTTTCAGAAGAGG | + |
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Preference number: 5 (lower is better) Translates to: INNPTSIRLQVQPAL*RRKDLGQCASFQKR Trigger: CCTCTTCTGAAAAGAGGCACATTGCCCAAGATCTTTCCTCCTCCAGAGCGCAGGCTGCACCTGAAGTCTGATTGATGTGGGGTTGTTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000660563.1 |
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| CDS TCA 90 bp | AACCATCAATGCTCCCAGAAGTTGAGTGAATTTGTCCTTCCTTCCTaGAGGGGGAATCTGAGCAGTGTAGCAGAGCATTCTGTACTGTCC | + |
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Preference number: 5 (lower is better) Translates to: NHQCSQKLSEFVLPS*RGNLSSVAEHSVLS Trigger: GGACAGTACAGAATGCTCTGCTACACTGCTCAGATTCCCCCTTCAGGAAGGAAGGACAAATTCACTCAACTTCTGGGAGCATTGATGGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENST00000447481.1 ENST00000658258.1 ENST00000660058.1 ENST00000660563.1 ENST00000660939.1 ENST00000661099.1 ENST00000665843.1 ENST00000668744.1 ENST00000670122.1 |
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| CDS CCA 90 bp | ATTGTTTTTGCAAAGAAGCTGAGGCTGGGATGTGCCTGGCATGTTTaGGGAAGAACAAGGAAACCAGTGTTGCTTAGGTGCAGAGTTTCT | + |
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Preference number: 5 (lower is better) Translates to: IVFAKKLRLGCAWHV*GRTRKPVLLRCRVS Trigger: AGAAACTCTGCACCTAAGCAACACTGGTTTCCTTGTTCTTCCCCAAACATGCCAGGCACATCCCAGCCTCAGCTTCTTTGCAAAAACAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000422700.1 |
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| CDS GCA 90 bp | TTTTATTCTGACAGCACTTTGAAGGATTTGAGATGGAGAACGCTGTaGCGTTGCCTTTGCACATCTTCCAGACAGTGGAGAATGCGTTTA | + |
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Preference number: 5 (lower is better) Translates to: FYSDSTLKDLRWRTL*RCLCTSSRQWRMRL Trigger: TAAACGCATTCTCCACTGTCTGGAAGATGTGCAAAGGCAACGGCACAGCGTTCTCCATCTCAAATCCTTCAAAGTGCTGTCAGAATAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000436112.1 ENST00000443303.2 ENST00000653266.1 ENST00000655558.1 ENST00000655844.1 ENST00000656169.1 ENST00000658894.1 ENST00000660058.1 ENST00000660563.1 ENST00000661280.1 ENST00000662166.1 ENST00000662967.1 ENST00000664113.1 ENST00000666171.1 ENST00000669240.1 ENST00000669461.1 |
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| CDS TCA 90 bp | TATTCACTGCCAATTGAGGCAATTTGGAAAAGCAGAGTGTGTCACTaGGATCTCGACAAAGTTCGCTTTCATAGACGCACCTGCATCTTT | + |
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Preference number: 5 (lower is better) Translates to: YSLPIEAIWKSRVCH*DLDKVRFHRRTCIF Trigger: AAAGATGCAGGTGCGTCTATGAAAGCGAACTTTGTCGAGATCTCAGTGACACACTCTGCTTTTCCAAATTGCCTCAATTGGCAGTGAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422700.1 |
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| CDS CCA 90 bp | GCAGTAAGCTTCCTTTACTTTCATTCTTCTGTCAATACCACAAACTaGCTCTTATTCTCCTCATCAGACAGAATAATCACCTTGCCCCCG | + |
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Preference number: 5 (lower is better) Translates to: AVSFLYFHSSVNTTN*LLFSSSDRIITLPP Trigger: CGGGGGCAAGGTGATTATTCTGTCTGATGAGGAGAATAAGAGCCAGTTTGTGGTATTGACAGAAGAATGAAAGTAAAGGAAGCTTACTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000660058.1 |
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| CDS CCA 90 bp | TCTTGTGAAGTCACCAAGTCACCTCATGAAGAAGTGACATGGGTGTaGCCACTATTTATTCTGACAGCTATTTTTGTTCTCATATCCAGA | + |
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Preference number: 5 (lower is better) Translates to: SCEVTKSPHEEVTWV*PLFILTAIFVLISR Trigger: TCTGGATATGAGAACAAAAATAGCTGTCAGAATAAATAGTGGCCACACCCATGTCACTTCTTCATGAGGTGACTTGGTGACTTCACAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000422700.1 |
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| CDS CCA 90 bp | AGATTGGTTGAACTTTACTTTCATTCTTCTGTCAATACCACAAACTaGCTCTTATTCTCCTCATCAGACAGAATAATCACCTTGCCCCCG | + |
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Preference number: 5 (lower is better) Translates to: RLVELYFHSSVNTTN*LLFSSSDRIITLPP Trigger: CGGGGGCAAGGTGATTATTCTGTCTGATGAGGAGAATAAGAGCCAGTTTGTGGTATTGACAGAAGAATGAAAGTAAAGTTCAACCAATCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000443303.2 ENST00000658894.1 ENST00000661280.1 ENST00000669461.1 |
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| CDS CCA 90 bp | ATCATCCAGCCACTGTTGCACCTCTTTTCCTGTAAAGTGAGTTTCTaGTTGTTTAATGTCTCTTCTAGGGTAGGTATATTCTCCCTTAGA | + |
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Preference number: 5 (lower is better) Translates to: IIQPLLHLFSCKVSF*LFNVSSRVGIFSLR Trigger: TCTAAGGGAGAATATACCTACCCTAGAAGAGACATTAAACAACCAGAAACTCACTTTACAGGAAAAGAGGTGCAACAGTGGCTGGATGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660563.1 |
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| CDS CCA 90 bp | ACAGTCGATCTTATAATCATCCAGCCACTGTTGCACCTCTTTTCCTaGTTGTTTAATGTCTCTTCTAGGGTAGGTATATTCTCCCTTAGA | + |
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Preference number: 5 (lower is better) Translates to: TVDLIIIQPLLHLFS*LFNVSSRVGIFSLR Trigger: TCTAAGGGAGAATATACCTACCCTAGAAGAGACATTAAACAACCAGGAAAAGAGGTGCAACAGTGGCTGGATGATTATAAGATCGACTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656169.1 |
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| CDS TCA 90 bp | AGATTTTCACATCACCCACGACATTTCTTTTATCAAGTGCTTCAGTaGTTCAGAATCTCCACCATTGTTAATGGCTCATCAGTATCAGTC | + |
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Preference number: 5 (lower is better) Translates to: RFSHHPRHFFYQVLQ*FRISTIVNGSSVSV Trigger: GACTGATACTGATGAGCCATTAACAATGGTGGAGATTCTGAATCACTGAAGCACTTGATAAAAGAAATGTCGTGGGTGATGTGAAAATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000458028.1 ENST00000654106.1 ENST00000654779.1 ENST00000662166.1 ENST00000669653.1 |
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| CDS GCA 90 bp | GCATATGTAGATTTTCACATCACCCACGACATTTCTTTTATCAAGTaGTTCAGTGATTCAGAATCTCCACCATTGTTAATGGCTCATCAG | + |
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Preference number: 5 (lower is better) Translates to: AYVDFHITHDISFIK*FSDSESPPLLMAHQ Trigger: CTGATGAGCCATTAACAATGGTGGAGATTCTGAATCACTGAAGCACTTGATAAAAGAAATGTCGTGGGTGATGTGAAAATCTACATATGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000458028.1 ENST00000654106.1 ENST00000654779.1 ENST00000662166.1 ENST00000669653.1 |
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| CDS CCA 90 bp | AGTAAGCTTCCTATGCCTTCTATGAACTACTTTATTGCTCTTCAATaGCAGCCTCTTTTGGATGGTGTAGTTTTTAATAGGAACAGTCGA | + |
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Preference number: 5 (lower is better) Translates to: SKLPMPSMNYFIALQ*QPLLDGVVFNRNSR Trigger: TCGACTGTTCCTATTAAAAACTACACCATCCAAAAGAGGCTGCCATTGAAGAGCAATAAAGTAGTTCATAGAAGGCATAGGAAGCTTACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000660563.1 ENST00000668744.1 ENST00000670122.1 |
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| CDS TCA 90 bp | AAACATTTAGAACAGAGCAGTGTAGAACAAACGATGGTTCCTTCTTaGGCAGTCTTGAGACCCAAGAAGAATAAAAACTTTATCTCCACA | + |
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Preference number: 5 (lower is better) Translates to: KHLEQSSVEQTMVPS*AVLRPKKNKNFIST Trigger: TGTGGAGATAAAGTTTTTATTCTTCTTGGGTCTCAAGACTGCTCAAGAAGGAACCATCGTTTGTTCTACACTGCTCTGTTCTAAATGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000458028.1 ENST00000654106.1 ENST00000654779.1 |
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| CDS TCA 90 bp | TTTATGTACCATAACTCTCTTCCACTGAAATCAGTTGTGTACTATTaGATGATTGATCATGTCTGGGGTGAGAGAGTATCTGATGATTTT | + |
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Preference number: 5 (lower is better) Translates to: FMYHNSLPLKSVVYY*MIDHVWGERVSDDF Trigger: AAAATCATCAGATACTCTCTCACCCCAGACATGATCAATCATTCAATAGTACACAACTGATTTCAGTGGAAGAGAGTTATGGTACATAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664107.1 |
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| CDS CCA 90 bp | TTCTTTTACAACAAAGGAAACAATCAACAGAATGAAGAGACAACCTaGTTGTTTAATGTCTCTTCTAGGGTAGGTATATTCTCCCTTAGA | + |
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Preference number: 5 (lower is better) Translates to: FFYNKGNNQQNEETT*LFNVSSRVGIFSLR Trigger: TCTAAGGGAGAATATACCTACCCTAGAAGAGACATTAAACAACCAGGTTGTCTCTTCATTCTGTTGATTGTTTCCTTTGTTGTAAAAGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000655558.1 ENST00000655844.1 ENST00000662967.1 ENST00000666171.1 ENST00000668744.1 ENST00000670122.1 |
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| CDS CCA 72 bp | AGGAGGTCAGCCCAGATGGTGCTCATTTCATATGGGTaGGGTGGGGCCTATCTTGTGAAGTCACCAAGTCAC | + |
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Preference number: 6 (lower is better) Translates to: RRSAQMVLISYG*GGAYLVKSPSH Trigger: GTGACTTGGTGACTTCACAAGATAGGCCCCACCCCACCCATATGAAATGAGCACCATCTGGGCTGACCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422700.1 |
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| CDS CCA 72 bp | TCAGGTGCAGCCTGCGCTCTGGAGGAGGAAAGATCTTaGGCAATGTGCCTCTTTTCAGAAGAGGGCAACTTC | + |
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Preference number: 6 (lower is better) Translates to: SGAACALEEERS*AMCLFSEEGNF Trigger: GAAGTTGCCCTCTTCTGAAAAGAGGCACATTGCCCAAGATCTTTCCTCCTCCAGAGCGCAGGCTGCACCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENST00000447481.1 ENST00000658258.1 ENST00000660058.1 ENST00000660563.1 ENST00000660939.1 ENST00000661099.1 ENST00000665843.1 ENST00000668744.1 ENST00000670122.1 |
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| CDS CCA 72 bp | CAGTTCTGCAGGCTAGGAAATCCAAGATCAAAGTGTTaGCAGATTCAGTGTCTGGCGAGGGCCCACGACCTG | + |
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Preference number: 6 (lower is better) Translates to: QFCRLGNPRSKC*QIQCLARAHDL Trigger: CAGGTCGTGGGCCCTCGCCAGACACTGAATCTGCCAACACTTTGATCTTGGATTTCCTAGCCTGCAGAACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000458028.1 ENST00000654106.1 ENST00000654779.1 |
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| CDS GCA 72 bp | ATCATACCCCACATCAATCAGACTTCAGGTGCAGCCTaGGCTCTGGAGGAGGAAAGATCTTGGGCAATGTGC | + |
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Preference number: 6 (lower is better) Translates to: IIPHINQTSGAA*ALEEERSWAMC Trigger: GCACATTGCCCAAGATCTTTCCTCCTCCAGAGCGCAGGCTGCACCTGAAGTCTGATTGATGTGGGGTATGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000447481.1 ENST00000658258.1 ENST00000660939.1 ENST00000661099.1 ENST00000665843.1 ENST00000668744.1 ENST00000670122.1 |
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| CDS CCA 72 bp | GTCAGCCCAGATGGTGCTCATTTCATATGGGTGGGGTaGGGCCTATCTTGTGAAGTCACCAAGTCACCTCAT | + |
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Preference number: 6 (lower is better) Translates to: VSPDGAHFIWVG*GLSCEVTKSPH Trigger: ATGAGGTGACTTGGTGACTTCACAAGATAGGCCCCACCCCACCCATATGAAATGAGCACCATCTGGGCTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422700.1 |
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| CDS CCA 72 bp | GCAAAGAAGCTGAGGCTGGGATGTGCCTGGCATGTTTaGGGAAGAACAAGGAAACCAGTGTTGCTTAGGTGC | + |
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Preference number: 6 (lower is better) Translates to: AKKLRLGCAWHV*GRTRKPVLLRC Trigger: GCACCTAAGCAACACTGGTTTCCTTGTTCTTCCCCAAACATGCCAGGCACATCCCAGCCTCAGCTTCTTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000422700.1 |
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| CDS CCA 72 bp | CCCACATCAATCAGACTTCAGGTGCAGCCTGCGCTCTaGAGGAGGAAAGATCTTGGGCAATGTGCCTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: PTSIRLQVQPAL*RRKDLGQCASF Trigger: AAAAGAGGCACATTGCCCAAGATCTTTCCTCCTCCAGAGCGCAGGCTGCACCTGAAGTCTGATTGATGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000447481.1 ENST00000658258.1 ENST00000660058.1 ENST00000660563.1 ENST00000660939.1 ENST00000661099.1 ENST00000665843.1 ENST00000668744.1 ENST00000670122.1 |
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| CDS CCA 72 bp | GCACTTCTGTTGAGCATCCAAGACCATGGATGTCTGTaGCATTTCCCTTCACCCCAGGGAGTCTCAGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: ALLLSIQDHGCL*HFPSPQGVSGL Trigger: AAGACCTGAGACTCCCTGGGGTGAAGGGAAATGCCACAGACATCCATGGTCTTGGATGCTCAACAGAAGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000655558.1 ENST00000658258.1 ENST00000665843.1 |
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| CDS CAA 72 bp | ACAGTTCTGCAGGCTAGGAAATCCAAGATCAAAGTGTaGGCAGATTCAGTGTCTGGCGAGGGCCCACGACCT | + |
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Preference number: 6 (lower is better) Translates to: TVLQARKSKIKV*ADSVSGEGPRP Trigger: AGGTCGTGGGCCCTCGCCAGACACTGAATCTGCCAACACTTTGATCTTGGATTTCCTAGCCTGCAGAACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000458028.1 ENST00000654106.1 ENST00000654779.1 |
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| CDS CAA 90 bp | CAGCACTTTGAAGGATTTGAGATGGAGAACGCTGTGCCGTTGCCTTaGCACATCTTCCAGACAGTGGAGAATGCGTTTAGGGGCAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: QHFEGFEMENAVPLP*HIFQTVENAFRGSR Trigger: TCTGCTGCCCCTAAACGCATTCTCCACTGTCTGGAAGATGTGCAAAGGCAACGGCACAGCGTTCTCCATCTCAAATCCTTCAAAGTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 16 transcripts: ENST00000436112.1 ENST00000443303.2 ENST00000653266.1 ENST00000655558.1 ENST00000655844.1 ENST00000656169.1 ENST00000658894.1 ENST00000660058.1 ENST00000660563.1 ENST00000661280.1 ENST00000662166.1 ENST00000662967.1 ENST00000664113.1 ENST00000666171.1 ENST00000669240.1 ENST00000669461.1 |
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| CDS CAA 90 bp | CTTTGTAGATTGGTTGAACTTGCCCCCGGCCGGATCCTGCCTTTTTaGGATCACCAAGGCAAGCACTTCTGTCTTGTTCTCCCACTGTAC | + |
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Preference number: 6 (lower is better) Translates to: LCRLVELAPGRILPF*DHQGKHFCLVLPLY Trigger: GTACAGTGGGAGAACAAGACAGAAGTGCTTGCCTTGGTGATCCAAAAAAGGCAGGATCCGGCCGGGGGCAAGTTCAACCAATCTACAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000669240.1 |
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| CDS GCA 72 bp | AAGGATTTGAGATGGAGAACGCTGTGCCGTTGCCTTTaGACATCTTCCAGACAGTGGAGAATGCGTTTAGGG | + |
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Preference number: 6 (lower is better) Translates to: KDLRWRTLCRCL*TSSRQWRMRLG Trigger: CCCTAAACGCATTCTCCACTGTCTGGAAGATGTGCAAAGGCAACGGCACAGCGTTCTCCATCTCAAATCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000436112.1 ENST00000443303.2 ENST00000653266.1 ENST00000655558.1 ENST00000655844.1 ENST00000656169.1 ENST00000658894.1 ENST00000660058.1 ENST00000660563.1 ENST00000661280.1 ENST00000662166.1 ENST00000662967.1 ENST00000664113.1 ENST00000666171.1 ENST00000669240.1 ENST00000669461.1 |
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| CDS GCA 72 bp | GACAGCACTTTGAAGGATTTGAGATGGAGAACGCTGTaGCGTTGCCTTTGCACATCTTCCAGACAGTGGAGA | + |
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Preference number: 6 (lower is better) Translates to: DSTLKDLRWRTL*RCLCTSSRQWR Trigger: TCTCCACTGTCTGGAAGATGTGCAAAGGCAACGGCACAGCGTTCTCCATCTCAAATCCTTCAAAGTGCTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000436112.1 ENST00000443303.2 ENST00000653266.1 ENST00000655558.1 ENST00000655844.1 ENST00000656169.1 ENST00000658894.1 ENST00000660058.1 ENST00000660563.1 ENST00000661280.1 ENST00000662166.1 ENST00000662967.1 ENST00000664113.1 ENST00000666171.1 ENST00000669240.1 ENST00000669461.1 |
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| CDS CCA 72 bp | TCAAGGAGAGCCCTGAGGTTAGAACAGTCCTTTAGATaGGGAAAGGAGACCAGACCATCATACCCCACATCA | + |
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Preference number: 6 (lower is better) Translates to: SRRALRLEQSFR*GKETRPSYPTS Trigger: TGATGTGGGGTATGATGGTCTGGTCTCCTTTCCCCATCTAAAGGACTGTTCTAACCTCAGGGCTCTCCTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000447481.1 ENST00000660939.1 ENST00000661099.1 ENST00000665843.1 ENST00000670122.1 |
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| CDS CAA 72 bp | GAAGGATTTGAGATGGAGAACGCTGTGCCGTTGCCTTaGCACATCTTCCAGACAGTGGAGAATGCGTTTAGG | + |
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Preference number: 6 (lower is better) Translates to: EGFEMENAVPLP*HIFQTVENAFR Trigger: CCTAAACGCATTCTCCACTGTCTGGAAGATGTGCAAAGGCAACGGCACAGCGTTCTCCATCTCAAATCCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000436112.1 ENST00000443303.2 ENST00000653266.1 ENST00000655558.1 ENST00000655844.1 ENST00000656169.1 ENST00000658894.1 ENST00000660058.1 ENST00000660563.1 ENST00000661280.1 ENST00000662166.1 ENST00000662967.1 ENST00000664113.1 ENST00000666171.1 ENST00000669240.1 ENST00000669461.1 |
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| CDS CAA 72 bp | CACTTTGAAGGATTTGAGATGGAGAACGCTGTGCCGTaGCCTTTGCACATCTTCCAGACAGTGGAGAATGCG | + |
|
Preference number: 6 (lower is better) Translates to: HFEGFEMENAVP*PLHIFQTVENA Trigger: CGCATTCTCCACTGTCTGGAAGATGTGCAAAGGCAACGGCACAGCGTTCTCCATCTCAAATCCTTCAAAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000436112.1 ENST00000443303.2 ENST00000653266.1 ENST00000655558.1 ENST00000655844.1 ENST00000656169.1 ENST00000658894.1 ENST00000660058.1 ENST00000660563.1 ENST00000661280.1 ENST00000662166.1 ENST00000662967.1 ENST00000664113.1 ENST00000666171.1 ENST00000669240.1 ENST00000669461.1 |
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| CDS TCA 72 bp | TCTGAAGGAGTGTGCACAGTGAAAAGTCAGCCTCTTTaGTGCACTTACACAGTGTCTCCCTACCCACAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SEGVCTVKSQPL*CTYTVSPYPQG Trigger: TCCTTGTGGGTAGGGAGACACTGTGTAAGTGCATCAAAGAGGCTGACTTTTCACTGTGCACACTCCTTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422700.1 |
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| CDS TCA 72 bp | TGCTCCCAGAAGTTGAGTGAATTTGTCCTTCCTTCCTaGAGGGGGAATCTGAGCAGTGTAGCAGAGCATTCT | + |
|
Preference number: 6 (lower is better) Translates to: CSQKLSEFVLPS*RGNLSSVAEHS Trigger: AGAATGCTCTGCTACACTGCTCAGATTCCCCCTTCAGGAAGGAAGGACAAATTCACTCAACTTCTGGGAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 9 transcripts: ENST00000447481.1 ENST00000658258.1 ENST00000660058.1 ENST00000660563.1 ENST00000660939.1 ENST00000661099.1 ENST00000665843.1 ENST00000668744.1 ENST00000670122.1 |
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| CDS TCA 72 bp | GCCTCTTTTCAGAAGAGGGCAACTTCCAAAAAGGTCTaGTGGCTGAGAGCTCAACCATCAATGCTCCCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: ASFQKRATSKKV*WLRAQPSMLPE Trigger: TTCTGGGAGCATTGATGGTTGAGCTCTCAGCCATCAGACCTTTTTGGAAGTTGCCCTCTTCTGAAAAGAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENST00000447481.1 ENST00000658258.1 ENST00000660058.1 ENST00000660563.1 ENST00000660939.1 ENST00000661099.1 ENST00000665843.1 ENST00000668744.1 ENST00000670122.1 |
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| CDS GCA 72 bp | ACTTTGAAGGATTTGAGATGGAGAACGCTGTGCCGTTaGCTTTGCACATCTTCCAGACAGTGGAGAATGCGT | + |
|
Preference number: 6 (lower is better) Translates to: TLKDLRWRTLCR*LCTSSRQWRMR Trigger: ACGCATTCTCCACTGTCTGGAAGATGTGCAAAGGCAACGGCACAGCGTTCTCCATCTCAAATCCTTCAAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 16 transcripts: ENST00000436112.1 ENST00000443303.2 ENST00000653266.1 ENST00000655558.1 ENST00000655844.1 ENST00000656169.1 ENST00000658894.1 ENST00000660058.1 ENST00000660563.1 ENST00000661280.1 ENST00000662166.1 ENST00000662967.1 ENST00000664113.1 ENST00000666171.1 ENST00000669240.1 ENST00000669461.1 |
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| CDS GCA 72 bp | CTTCTGCAGCCCCTTAAGTCAAACCAGATAGGAAACTaGCTCCTCAGACTGCACGAGGAGTCTACTGAAATT | + |
|
Preference number: 6 (lower is better) Translates to: LLQPLKSNQIGN*LLRLHEESTEI Trigger: AATTTCAGTAGACTCCTCGTGCAGTCTGAGGAGGCAGTTTCCTATCTGGTTTGACTTAAGGGGCTGCAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000458028.1 ENST00000654106.1 ENST00000658894.1 ENST00000669240.1 |
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| CDS CAA 90 bp | TGCCTGCTCCAGGCTTCTTTTCCCAGCATAATCTATCCAGACCACTaGTGTTTAGTATCCAAGTGTAGCTCTCCTTTGTTCCAGGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: CLLQASFPSIIYPDH*CLVSKCSSPLFQAE Trigger: CTCAGCCTGGAACAAAGGAGAGCTACACTTGGATACTAAACACAAGTGGTCTGGATAGATTATGCTGGGAAAAGAAGCCTGGAGCAGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 20 transcripts: ENST00000422700.1 ENST00000458028.1 ENST00000654106.1 ENST00000654779.1 ENST00000655844.1 ENST00000657473.1 ENST00000658894.1 ENST00000661099.1 ENST00000661280.1 ENST00000662166.1 ENST00000662967.1 ENST00000663205.1 ENST00000664107.1 ENST00000664113.1 ENST00000666560.1 ENST00000667763.1 ENST00000669240.1 ENST00000669461.1 ENST00000669653.1 ENST00000670122.1 |
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| CDS CAA 90 bp | ACTGAGATCTCGACAAAGTTCGCTTTCATAGACGCACCTGCATCTTaGTACAGTAATTACAGACCCCGAAAGAGGAGGTCAGCCCAGATG | + |
|
Preference number: 6 (lower is better) Translates to: TEISTKFAFIDAPAS*YSNYRPRKRRSAQM Trigger: CATCTGGGCTGACCTCCTCTTTCGGGGTCTGTAATTACTGTACAAAGATGCAGGTGCGTCTATGAAAGCGAACTTTGTCGAGATCTCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422700.1 |
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| CDS TCA 72 bp | TTTTGCAAGGCTCTGCAAACTGCTCCAGCACACTTCTaGCTAAAGTCATCACTTGTTCTCCCACTGTACTGC | + |
|
Preference number: 6 (lower is better) Translates to: FCKALQTAPAHF*LKSSLVLPLYC Trigger: GCAGTACAGTGGGAGAACAAGTGATGACTTTAGTCAGAAGTGTGCTGGAGCAGTTTGCAGAGCCTTGCAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000664107.1 |
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| CDS GCA 72 bp | CACTCAAAAAGTAATAAGAGCTCCCTATTCACTTTCTaGCTCCTCCTAGTCATGTGGGTGTCACAGGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: HSKSNKSSLFTF*LLLVMWVSQAV Trigger: CACAGCCTGTGACACCCACATGACTAGGAGGAGGCAGAAAGTGAATAGGGAGCTCTTATTACTTTTTGAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000422700.1 ENST00000662967.1 ENST00000664107.1 ENST00000667512.1 ENST00000667763.1 ENST00000669461.1 |
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| CDS TCA 72 bp | CCAATTGAGGCAATTTGGAAAAGCAGAGTGTGTCACTaGGATCTCGACAAAGTTCGCTTTCATAGACGCACC | + |
|
Preference number: 6 (lower is better) Translates to: PIEAIWKSRVCH*DLDKVRFHRRT Trigger: GGTGCGTCTATGAAAGCGAACTTTGTCGAGATCTCAGTGACACACTCTGCTTTTCCAAATTGCCTCAATTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422700.1 |
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| CDS TCA 72 bp | AGCAGAGCATTCTGTACTGTCCATTCTTGCACACCTTaGGTCCTCTTGCTTCACCTAAGTTCTGAAAGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: SRAFCTVHSCTP*VLLLHLSSESC Trigger: ACAGCTTTCAGAACTTAGGTGAAGCAAGAGGACTCAAGGTGTGCAAGAATGGACAGTACAGAATGCTCTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000447481.1 ENST00000658258.1 ENST00000660058.1 ENST00000660563.1 ENST00000660939.1 ENST00000661099.1 ENST00000665843.1 ENST00000668744.1 ENST00000670122.1 |
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| CDS CAA 72 bp | TCGACAAAGTTCGCTTTCATAGACGCACCTGCATCTTaGTACAGTAATTACAGACCCCGAAAGAGGAGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: STKFAFIDAPAS*YSNYRPRKRRS Trigger: TGACCTCCTCTTTCGGGGTCTGTAATTACTGTACAAAGATGCAGGTGCGTCTATGAAAGCGAACTTTGTCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422700.1 |
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| CDS CAA 72 bp | GGGCCTGTGAAAATATTTTTGGCCTTTGTAGATTGGTaGAACCCACATCAATCAGACTTCAGGTGCAGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GPVKIFLAFVDW*NPHQSDFRCSL Trigger: CAGGCTGCACCTGAAGTCTGATTGATGTGGGTTCAACCAATCTACAAAGGCCAAAAATATTTTCACAGGCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000660058.1 |
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| CDS TCA 72 bp | TTGCACACCTTGAGTCCTCTTGCTTCACCTAAGTTCTaGAAGCTGTATCTTCAGGACTCTGAGGGATTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LHTLSPLASPKF*KLYLQDSEGFL Trigger: AAGAAATCCCTCAGAGTCCTGAAGATACAGCTTTCAGAACTTAGGTGAAGCAAGAGGACTCAAGGTGTGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000447481.1 ENST00000658258.1 ENST00000660058.1 ENST00000660563.1 ENST00000660939.1 ENST00000661099.1 ENST00000665843.1 ENST00000668744.1 ENST00000670122.1 |
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| CDS GCA 72 bp | CCTGGCATGTTTGGGGAAGAACAAGGAAACCAGTGTTaGTTAGGTGCAGAGTTTCTGTGGAAGAAAAGAAAA | + |
|
Preference number: 6 (lower is better) Translates to: PGMFGEEQGNQC*LGAEFLWKKRK Trigger: TTTTCTTTTCTTCCACAGAAACTCTGCACCTAAGCAACACTGGTTTCCTTGTTCTTCCCCAAACATGCCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000422700.1 |
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| CDS CCA 72 bp | AATACATGCACACCGTATACAATTCCGAATTTCCAGTaGTCTGAAGGAGTGTGCACAGTGAAAAGTCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: NTCTPYTIPNFQ*SEGVCTVKSQP Trigger: AGGCTGACTTTTCACTGTGCACACTCCTTCAGACCACTGGAAATTCGGAATTGTATACGGTGTGCATGTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422700.1 |
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| CDS GCA 72 bp | AAGCTGTATCTTCAGGACTCTGAGGGATTTCTTTCCTaGAGTAAGCTTCTCTGTTCATGTGCTTATTGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: KLYLQDSEGFLS*SKLLCSCAYCP Trigger: TGGACAATAAGCACATGAACAGAGAAGCTTACTGCAGGAAAGAAATCCCTCAGAGTCCTGAAGATACAGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000658258.1 |
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| CDS CAA 72 bp | CAGGCTTCTTTTCCCAGCATAATCTATCCAGACCACTaGTGTTTAGTATCCAAGTGTAGCTCTCCTTTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: QASFPSIIYPDH*CLVSKCSSPLF Trigger: GAACAAAGGAGAGCTACACTTGGATACTAAACACAAGTGGTCTGGATAGATTATGCTGGGAAAAGAAGCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 20 transcripts: ENST00000422700.1 ENST00000458028.1 ENST00000654106.1 ENST00000654779.1 ENST00000655844.1 ENST00000657473.1 ENST00000658894.1 ENST00000661099.1 ENST00000661280.1 ENST00000662166.1 ENST00000662967.1 ENST00000663205.1 ENST00000664107.1 ENST00000664113.1 ENST00000666560.1 ENST00000667763.1 ENST00000669240.1 ENST00000669461.1 ENST00000669653.1 ENST00000670122.1 |
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| CDS TCA 72 bp | TTAGATGCTGGGGGAAGTAACAGAGAGCAAAAGATTTaGAGACAAATCCTTGCCTTCATGGAGCTTGGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: LDAGGSNREQKI*RQILAFMELGF Trigger: AAAACCAAGCTCCATGAAGGCAAGGATTTGTCTTCAAATCTTTTGCTCTCTGTTACTTCCCCCAGCATCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000422700.1 ENST00000657473.1 ENST00000667763.1 |
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| CDS TCA 72 bp | AGGAAACTGCCTCCTCAGACTGCACGAGGAGTCTACTaGAATTCTGATTTTCTTAAATGTACAGCAAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: RKLPPQTARGVY*NSDFLKCTAKK Trigger: CTTCTTTGCTGTACATTTAAGAAAATCAGAATTTCAGTAGACTCCTCGTGCAGTCTGAGGAGGCAGTTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000458028.1 ENST00000654106.1 ENST00000658894.1 ENST00000669240.1 |
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| CDS GCA 72 bp | AAGCTGTATCTTCAGGACTCTGAGGGATTTCTTTCCTaGAGTAAGCTTCCTATGCCTTCTATGAACTACTTT | + |
|
Preference number: 6 (lower is better) Translates to: KLYLQDSEGFLS*SKLPMPSMNYF Trigger: AAAGTAGTTCATAGAAGGCATAGGAAGCTTACTGCAGGAAAGAAATCCCTCAGAGTCCTGAAGATACAGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000660563.1 ENST00000668744.1 ENST00000670122.1 |
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| CDS CCA 72 bp | CGAATGGTGTATATCTATGAACAGACAAATTTTCAGTaGAAGAAGGGAAGTTCTGGCAAGCTTCAGCAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: RMVYIYEQTNFQ*KKGSSGKLQQH Trigger: ATGCTGCTGAAGCTTGCCAGAACTTCCCTTCTTCCACTGAAAATTTGTCTGTTCATAGATATACACCATTCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665843.1 |
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| CDS CAA 72 bp | ATAGGAACAGTCGATCTTATAATCATCCAGCCACTGTaGCACCTCTTTTCCTGTAAAGTGAGTTTCTGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: IGTVDLIIIQPL*HLFSCKVSFWL Trigger: CAACCAGAAACTCACTTTACAGGAAAAGAGGTGCAACAGTGGCTGGATGATTATAAGATCGACTGTTCCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660563.1 |
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| CDS CAA 90 bp | TCTTTCCAGAGACATTCCATGACTCTTTCTAATATTCACTGCCAATaGAGGCAATTTGGAAAAGCAGAGTGTGTCACTGAGATCTCGACA | + |
|
Preference number: 6 (lower is better) Translates to: SFQRHSMTLSNIHCQ*RQFGKAECVTEIST Trigger: TGTCGAGATCTCAGTGACACACTCTGCTTTTCCAAATTGCCTCAATTGGCAGTGAATATTAGAAAGAGTCATGGAATGTCTCTGGAAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000422700.1 |
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| CDS CAA 90 bp | ATCCAGCCACTGTTGCACCTCTTTTCCTGTAAAGTGAGTTTCTGGTaGTTTAATGTCTCTTCTAGGGTAGGTATATTCTCCCTTAGACAT | + |
|
Preference number: 6 (lower is better) Translates to: IQPLLHLFSCKVSFW*FNVSSRVGIFSLRH Trigger: ATGTCTAAGGGAGAATATACCTACCCTAGAAGAGACATTAAACAACCAGAAACTCACTTTACAGGAAAAGAGGTGCAACAGTGGCTGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660563.1 |
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| CDS CAA 90 bp | GTCGATCTTATAATCATCCAGCCACTGTTGCACCTCTTTTCCTGGTaGTTTAATGTCTCTTCTAGGGTAGGTATATTCTCCCTTAGACAT | + |
|
Preference number: 6 (lower is better) Translates to: VDLIIIQPLLHLFSW*FNVSSRVGIFSLRH Trigger: ATGTCTAAGGGAGAATATACCTACCCTAGAAGAGACATTAAACAACCAGGAAAAGAGGTGCAACAGTGGCTGGATGATTATAAGATCGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000656169.1 |
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| CDS GCA 72 bp | GATTGGTTGAACTATGCCTTCTATGAACTACTTTATTaGTCTTCAATGGCAGCCTCTTTTGGATGGTGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: DWLNYAFYELLY*SSMAASFGWCS Trigger: ACTACACCATCCAAAAGAGGCTGCCATTGAAGAGCAATAAAGTAGTTCATAGAAGGCATAGTTCAACCAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000655558.1 ENST00000655844.1 ENST00000656169.1 ENST00000662967.1 |
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| CDS CCA 72 bp | CCACTGTTGCACCTCTTTTCCTGTAAAGTGAGTTTCTaGTTGTTTAATGTCTCTTCTAGGGTAGGTATATTC | + |
|
Preference number: 6 (lower is better) Translates to: PLLHLFSCKVSF*LFNVSSRVGIF Trigger: GAATATACCTACCCTAGAAGAGACATTAAACAACCAGAAACTCACTTTACAGGAAAAGAGGTGCAACAGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000660563.1 |
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| CDS CAA 72 bp | TTTATCAAGTGCTTCAGTGATTCAGAATCTCCACCATaGTTAATGGCTCATCAGTATCAGTCTCCCACACTT | + |
|
Preference number: 6 (lower is better) Translates to: FIKCFSDSESPP*LMAHQYQSPTL Trigger: AAGTGTGGGAGACTGATACTGATGAGCCATTAACAATGGTGGAGATTCTGAATCACTGAAGCACTTGATAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000458028.1 ENST00000654106.1 ENST00000654779.1 ENST00000662166.1 ENST00000669653.1 |
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| CDS CAA 90 bp | GGGCCTGTGAAAATATTTTTGGCCTTTGTAGATTGGTTGAACTGGTaGTTTAATGTCTCTTCTAGGGTAGGTATATTCTCCCTTAGACAT | + |
|
Preference number: 6 (lower is better) Translates to: GPVKIFLAFVDWLNW*FNVSSRVGIFSLRH Trigger: ATGTCTAAGGGAGAATATACCTACCCTAGAAGAGACATTAAACAACCAGTTCAACCAATCTACAAAGGCCAAAAATATTTTCACAGGCCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000436112.1 ENST00000653266.1 ENST00000662166.1 ENST00000664113.1 |
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| CDS TCA 72 bp | CTAGTTCATTCATATACCATGACTCCAGACTGCTCCTaGTCTTCCCATCTTTCAAGACTTTACTTTCATTCT | + |
|
Preference number: 6 (lower is better) Translates to: LVHSYTMTPDCS*SSHLSRLYFHS Trigger: AGAATGAAAGTAAAGTCTTGAAAGATGGGAAGATCAGGAGCAGTCTGGAGTCATGGTATATGAATGAACTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000653266.1 ENST00000655558.1 ENST00000655844.1 ENST00000656169.1 ENST00000658258.1 ENST00000660563.1 ENST00000661099.1 ENST00000662166.1 ENST00000662967.1 ENST00000664113.1 ENST00000665843.1 ENST00000666171.1 ENST00000668744.1 ENST00000670122.1 |
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| CDS CAA 72 bp | ATAGGAACAGTCGATCTTATAATCATCCAGCCACTGTaGCACCTCTTTTCCTGTAAAGTGAGTTTCTTTTAC | + |
|
Preference number: 6 (lower is better) Translates to: IGTVDLIIIQPL*HLFSCKVSFFY Trigger: GTAAAAGAAACTCACTTTACAGGAAAAGAGGTGCAACAGTGGCTGGATGATTATAAGATCGACTGTTCCTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000655558.1 ENST00000655844.1 ENST00000662967.1 ENST00000666171.1 ENST00000668744.1 ENST00000670122.1 |
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| CDS CAA 90 bp | TGTGTTTCACCAATCAATATGGACCAGGGACAATGCGTTCTTTGTTaGATAAAAGTTAGAAATCCAAGTTTTTCCTCAAGTGCAGCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: CVSPINMDQGQCVLC*IKVRNPSFSSSAAK Trigger: TTTGGCTGCACTTGAGGAAAAACTTGGATTTCTAACTTTTATCAAACAAAGAACGCATTGTCCCTGGTCCATATTGATTGGTGAAACACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000666560.1 |
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| CDS GCA 72 bp | GATTTTCACATCACCCACGACATTTCTTTTATCAAGTaGTTCAGTGATTCAGAATCTCCACCATTGTTAATG | + |
|
Preference number: 6 (lower is better) Translates to: DFHITHDISFIK*FSDSESPPLLM Trigger: CATTAACAATGGTGGAGATTCTGAATCACTGAAGCACTTGATAAAAGAAATGTCGTGGGTGATGTGAAAATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000458028.1 ENST00000654106.1 ENST00000654779.1 ENST00000662166.1 ENST00000669653.1 |
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| CDS CCA 72 bp | GAACTTTACTTTCATTCTTCTGTCAATACCACAAACTaGCTCTTATTCTCCTCATCAGACAGAATAATCACC | + |
|
Preference number: 6 (lower is better) Translates to: ELYFHSSVNTTN*LLFSSSDRIIT Trigger: GGTGATTATTCTGTCTGATGAGGAGAATAAGAGCCAGTTTGTGGTATTGACAGAAGAATGAAAGTAAAGTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000443303.2 ENST00000658894.1 ENST00000661280.1 ENST00000669461.1 |
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| CDS CCA 72 bp | AGACTTTACTTTCATTCTTCTGTCAATACCACAAACTaGCTCTTATTCTCCTCATCAGACAGAATAATCACC | + |
|
Preference number: 6 (lower is better) Translates to: RLYFHSSVNTTN*LLFSSSDRIIT Trigger: GGTGATTATTCTGTCTGATGAGGAGAATAAGAGCCAGTTTGTGGTATTGACAGAAGAATGAAAGTAAAGTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000653266.1 ENST00000655558.1 ENST00000655844.1 ENST00000656169.1 ENST00000658258.1 ENST00000660563.1 ENST00000661099.1 ENST00000662166.1 ENST00000662967.1 ENST00000664113.1 ENST00000665843.1 ENST00000666171.1 ENST00000668744.1 ENST00000670122.1 |
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| CDS CCA 72 bp | TTCCTTTACTTTCATTCTTCTGTCAATACCACAAACTaGCTCTTATTCTCCTCATCAGACAGAATAATCACC | + |
|
Preference number: 6 (lower is better) Translates to: FLYFHSSVNTTN*LLFSSSDRIIT Trigger: GGTGATTATTCTGTCTGATGAGGAGAATAAGAGCCAGTTTGTGGTATTGACAGAAGAATGAAAGTAAAGGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000660058.1 |
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| CDS CCA 72 bp | CATCTTTACTTTCATTCTTCTGTCAATACCACAAACTaGCTCTTATTCTCCTCATCAGACAGAATAATCACC | + |
|
Preference number: 6 (lower is better) Translates to: HLYFHSSVNTTN*LLFSSSDRIIT Trigger: GGTGATTATTCTGTCTGATGAGGAGAATAAGAGCCAGTTTGTGGTATTGACAGAAGAATGAAAGTAAAGATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000667512.1 |
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| CDS CAA 72 bp | ATGAACTACTTTATTGCTCTTCAATGGCAGCCTCTTTaGGATGGTGTAGTTTTTAATAGGAACAGTCGATCT | + |
|
Preference number: 6 (lower is better) Translates to: MNYFIALQWQPL*DGVVFNRNSRS Trigger: AGATCGACTGTTCCTATTAAAAACTACACCATCCAAAAGAGGCTGCCATTGAAGAGCAATAAAGTAGTTCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000655558.1 ENST00000655844.1 ENST00000656169.1 ENST00000660563.1 ENST00000662967.1 ENST00000666171.1 ENST00000668744.1 ENST00000670122.1 |
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| CDS CAA 90 bp | ATGCCTTCTATGAACTACTTTATTGCTCTTCAATGGCAGCCTCTTTaGGATGGTGTAGTTTTTAATAGGAACAGTCGATCTTATAATCAT | + |
|
Preference number: 6 (lower is better) Translates to: MPSMNYFIALQWQPL*DGVVFNRNSRSYNH Trigger: ATGATTATAAGATCGACTGTTCCTATTAAAAACTACACCATCCAAAAGAGGCTGCCATTGAAGAGCAATAAAGTAGTTCATAGAAGGCAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENST00000655558.1 ENST00000655844.1 ENST00000656169.1 ENST00000660563.1 ENST00000662967.1 ENST00000666171.1 ENST00000668744.1 ENST00000670122.1 |
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| CDS TCA 72 bp | GTTCTGTCAGTTGCTGAGAAAGGGATGTTGAAACCTTaGAGTATAATTGTAGTCTTGTCTATTTCTCTTTTA | + |
|
Preference number: 6 (lower is better) Translates to: VLSVAEKGMLKP*SIIVVLSISLL Trigger: TAAAAGAGAAATAGACAAGACTACAATTATACTTCAAGGTTTCAACATCCCTTTCTCAGCAACTGACAGAAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000667512.1 |
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