Pregenerated sensors for LINC01012 (Homo sapiens)
Ensembl gene IDs: ENSG00000281706Ensembl transcript IDs: ENST00000625477.1, ENST00000628328.3, ENST00000628762.2, ENST00000629732.1, ENST00000662411.1
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TCCACAAGCCAGGCTGCTTCCCGATGCACCTTTTCTCCTGGGGAGTaGCCAGACGAGCGCCATCTGCTCCTGGGTCAGAGGAGTCCCTGC | + |
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Preference number: 5 (lower is better) Translates to: STSQAASRCTFSPGE*PDERHLLLGQRSPC Trigger: GCAGGGACTCCTCTGACCCAGGAGCAGATGGCGCTCGTCTGGGCACTCCCCAGGAGAAAAGGTGCATCGGGAAGCAGCCTGGCTTGTGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000625477.1 ENST00000628328.3 ENST00000628762.2 |
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| CDS CCA 90 bp | TCCACCATCCACAAGCCAGGCTGCTTCCCGATGCACCTTTTCTCCTaGGGAGTGCCCAGACGAGCGCCATCTGCTCCTGGGTCAGAGGAG | + |
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Preference number: 5 (lower is better) Translates to: STIHKPGCFPMHLFS*GVPRRAPSAPGSEE Trigger: CTCCTCTGACCCAGGAGCAGATGGCGCTCGTCTGGGCACTCCCCAGGAGAAAAGGTGCATCGGGAAGCAGCCTGGCTTGTGGATGGTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000625477.1 ENST00000628328.3 ENST00000628762.2 |
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| CDS CCA 90 bp | GCACCTTTTCTCCTGGGGAGTGCCCAGACGAGCGCCATCTGCTCCTaGGTCAGAGGAGTCCCTGCAGAGTCATCGACTTCCTCATTTCCA | + |
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Preference number: 5 (lower is better) Translates to: APFLLGSAQTSAICS*VRGVPAESSTSSFP Trigger: TGGAAATGAGGAAGTCGATGACTCTGCAGGGACTCCTCTGACCCAGGAGCAGATGGCGCTCGTCTGGGCACTCCCCAGGAGAAAAGGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000625477.1 ENST00000628328.3 ENST00000628762.2 |
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| CDS GCA 90 bp | CATAGGTTGCACTGGAGTCCCGAGGCGAAGCGCCGACACTTCATCTaGCCGTCACCTCCCGATTTTTGCAATGTGTTTCTTCTGAACAAG | + |
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Preference number: 5 (lower is better) Translates to: HRLHWSPEAKRRHFI*PSPPDFCNVFLLNK Trigger: CTTGTTCAGAAGAAACACATTGCAAAAATCGGGAGGTGACGGGCAGATGAAGTGTCGGCGCTTCGCCTCGGGACTCCAGTGCAACCTATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000625477.1 ENST00000628328.3 ENST00000628762.2 |
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| CDS CCA 90 bp | GAATGTCCCCAGCTCCTGTCTTCTTGCTCAATTGCCTTTGTCCCATaGCTTTCATCACGGATGTATGATAGCTGCTGTTCCTCCAGGAAT | + |
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Preference number: 5 (lower is better) Translates to: ECPQLLSSCSIAFVP*LSSRMYDSCCSSRN Trigger: ATTCCTGGAGGAACAGCAGCTATCATACATCCGTGATGAAAGCCATGGGACAAAGGCAATTGAGCAAGAAGACAGGAGCTGGGGACATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629732.1 |
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| CDS GCA 90 bp | CTCTTCCACCCTCACCCCAAGGCCAAGACATTCGGAATTTATTCCTaGCTCTCTTTACCTGTGACAATGCAGATGGATGCACAGAAAATA | + |
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Preference number: 5 (lower is better) Translates to: LFHPHPKAKTFGIYS*LSLPVTMQMDAQKI Trigger: TATTTTCTGTGCATCCATCTGCATTGTCACAGGTAAAGAGAGGCAGGAATAAATTCCGAATGTCTTGGCCTTGGGGTGAGGGTGGAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000628328.3 |
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| CDS TCA 90 bp | AAGTTTCCAGGTGATGCTGATGTTGCTGGTCCAGGAACCACACTCTaGGAACCTTTGGCCTATCTCATAAGGTCACTGAGAAAATTTAAA | + |
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Preference number: 5 (lower is better) Translates to: KFPGDADVAGPGTTL*EPLAYLIRSLRKFK Trigger: TTTAAATTTTCTCAGTGACCTTATGAGATAGGCCAAAGGTTCTCAGAGTGTGGTTCCTGGACCAGCAACATCAGCATCACCTGGAAACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629732.1 |
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| CDS TCA 90 bp | GAGCTTCAAGGAGTCAGTCTTGCTAGTTGTGTGACATTGGGCAAGTaGCATAAATTCAGCTGTTTCCTTATCTGCTGTCGCCATAAACTT | + |
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Preference number: 5 (lower is better) Translates to: ELQGVSLASCVTLGK*HKFSCFLICCRHKL Trigger: AAGTTTATGGCGACAGCAGATAAGGAAACAGCTGAATTTATGTCACTTGCCCAATGTCACACAACTAGCAAGACTGACTCCTTGAAGCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628762.2 |
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| CDS TCA 90 bp | ACTCCATATGTGATGAGCTTCAAGGAGTCAGTCTTGCTAGTTGTGTaGCATTGGGCAAGTGACATAAATTCAGCTGTTTCCTTATCTGCT | + |
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Preference number: 5 (lower is better) Translates to: TPYVMSFKESVLLVV*HWASDINSAVSLSA Trigger: AGCAGATAAGGAAACAGCTGAATTTATGTCACTTGCCCAATGTCACACAACTAGCAAGACTGACTCCTTGAAGCTCATCACATATGGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628762.2 |
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| CDS TCA 90 bp | TTCTTACATGTGATGAGCTTCAAGGAGTCAGTCTTGCTAGTTGTGTaGCATTGGGCAAGTGACATAAATTCAGCTGTTTCCTTATCTGTA | + |
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Preference number: 5 (lower is better) Translates to: FLHVMSFKESVLLVV*HWASDINSAVSLSV Trigger: TACAGATAAGGAAACAGCTGAATTTATGTCACTTGCCCAATGTCACACAACTAGCAAGACTGACTCCTTGAAGCTCATCACATGTAAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629732.1 |
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| CDS CCA 90 bp | ATATCCATAAGAATGACAAACAGACATAGAGCTGATTTTGACCTCTaGTCTCATTCTAGCAGTGAGGAATATTCTGCCATGGAAATACGA | + |
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Preference number: 5 (lower is better) Translates to: ISIRMTNRHRADFDL*SHSSSEEYSAMEIR Trigger: TCGTATTTCCATGGCAGAATATTCCTCACTGCTAGAATGAGACCAGAGGTCAAAATCAGCTCTATGTCTGTTTGTCATTCTTATGGATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629732.1 |
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| CDS GCA 72 bp | CAGGCTGCTTCCCGATGCACCTTTTCTCCTGGGGAGTaGCCAGACGAGCGCCATCTGCTCCTGGGTCAGAGG | + |
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Preference number: 6 (lower is better) Translates to: QAASRCTFSPGE*PDERHLLLGQR Trigger: CCTCTGACCCAGGAGCAGATGGCGCTCGTCTGGGCACTCCCCAGGAGAAAAGGTGCATCGGGAAGCAGCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000625477.1 ENST00000628328.3 ENST00000628762.2 |
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| CDS CCA 72 bp | CTCCTGGGGAGTGCCCAGACGAGCGCCATCTGCTCCTaGGTCAGAGGAGTCCCTGCAGAGTCATCGACTTCC | + |
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Preference number: 6 (lower is better) Translates to: LLGSAQTSAICS*VRGVPAESSTS Trigger: GGAAGTCGATGACTCTGCAGGGACTCCTCTGACCCAGGAGCAGATGGCGCTCGTCTGGGCACTCCCCAGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000625477.1 ENST00000628328.3 ENST00000628762.2 |
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| CDS CAA 72 bp | CCTGGCGATCCCCTTTGGGCACAAGAGCTCAGGGCGTaGGTCCCCGCGATCGCGGAAGCCCACTTCCAGAAA | + |
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Preference number: 6 (lower is better) Translates to: PGDPLWAQELRA*VPAIAEAHFQK Trigger: TTTCTGGAAGTGGGCTTCCGCGATCGCGGGGACCAACGCCCTGAGCTCTTGTGCCCAAAGGGGATCGCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000625477.1 ENST00000628328.3 ENST00000628762.2 ENST00000629732.1 |
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| CDS GCA 72 bp | CCTTGTCCACCATCCACAAGCCAGGCTGCTTCCCGATaGACCTTTTCTCCTGGGGAGTGCCCAGACGAGCGC | + |
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Preference number: 6 (lower is better) Translates to: PCPPSTSQAASR*TFSPGECPDER Trigger: GCGCTCGTCTGGGCACTCCCCAGGAGAAAAGGTGCATCGGGAAGCAGCCTGGCTTGTGGATGGTGGACAAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000625477.1 ENST00000628328.3 ENST00000628762.2 ENST00000662411.1 |
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| CDS CCA 72 bp | CTGGCGATCCCCTTTGGGCACAAGAGCTCAGGGCGTTaGTCCCCGCGATCGCGGAAGCCCACTTCCAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: LAIPFGHKSSGR*SPRSRKPTSRK Trigger: TTTTCTGGAAGTGGGCTTCCGCGATCGCGGGGACCAACGCCCTGAGCTCTTGTGCCCAAAGGGGATCGCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000625477.1 ENST00000628328.3 ENST00000628762.2 ENST00000629732.1 |
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| CDS GCA 72 bp | GACGAGCGCCATCTGCTCCTGGGTCAGAGGAGTCCCTaGAGAGTCATCGACTTCCTCATTTCCAAAAGCCCC | + |
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Preference number: 6 (lower is better) Translates to: DERHLLLGQRSP*RVIDFLISKSP Trigger: GGGGCTTTTGGAAATGAGGAAGTCGATGACTCTGCAGGGACTCCTCTGACCCAGGAGCAGATGGCGCTCGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000625477.1 ENST00000628328.3 ENST00000628762.2 |
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| CDS TCA 72 bp | ATCATGGCCCTGTTCAGTTTCTTCATCCACCACCCATaGAGAGGCATCGCGTGGCGGAGGCAGGAGAATCAC | + |
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Preference number: 6 (lower is better) Translates to: IMALFSFFIHHP*RGIAWRRQENH Trigger: GTGATTCTCCTGCCTCCGCCACGCGATGCCTCTTCATGGGTGGTGGATGAAGAAACTGAACAGGGCCATGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628328.3 |
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| CDS GCA 72 bp | CACTGGAGTCCCGAGGCGAAGCGCCGACACTTCATCTaGCCGTCACCTCCCGATTTTTGCAATGTGTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: HWSPEAKRRHFI*PSPPDFCNVFL Trigger: AAGAAACACATTGCAAAAATCGGGAGGTGACGGGCAGATGAAGTGTCGGCGCTTCGCCTCGGGACTCCAGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000625477.1 ENST00000628328.3 ENST00000628762.2 |
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| CDS TCA 72 bp | GGTGATGCTGATGTTGCTGGTCCAGGAACCACACTCTaGGAACCTTTGGCCTATCTCATAAGGTCACTGAGA | + |
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Preference number: 6 (lower is better) Translates to: GDADVAGPGTTL*EPLAYLIRSLR Trigger: TCTCAGTGACCTTATGAGATAGGCCAAAGGTTCTCAGAGTGTGGTTCCTGGACCAGCAACATCAGCATCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629732.1 |
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| CDS TCA 72 bp | ATCATGGCCCTGTTCAGTTTCTTCATCCACCACCCATaGAGAGGCATCGCCTGCTGTCGCCATAAACTTAGT | + |
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Preference number: 6 (lower is better) Translates to: IMALFSFFIHHP*RGIACCRHKLS Trigger: ACTAAGTTTATGGCGACAGCAGGCGATGCCTCTTCATGGGTGGTGGATGAAGAAACTGAACAGGGCCATGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000662411.1 |
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| CDS CAA 90 bp | GGCACTACTGTCAAGAATGTCCCCAGCTCCTGTCTTCTTGCTCAATaGCCTTTGTCCCATGGCTTTCATCACGGATGTATGATAGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: GTTVKNVPSSCLLAQ*PLSHGFHHGCMIAA Trigger: AGCAGCTATCATACATCCGTGATGAAAGCCATGGGACAAAGGCAATTGAGCAAGAAGACAGGAGCTGGGGACATTCTTGACAGTAGTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629732.1 |
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| CDS CCA 72 bp | CAGCTCCTGTCTTCTTGCTCAATTGCCTTTGTCCCATaGCTTTCATCACGGATGTATGATAGCTGCTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: QLLSSCSIAFVP*LSSRMYDSCCS Trigger: GGAACAGCAGCTATCATACATCCGTGATGAAAGCCATGGGACAAAGGCAATTGAGCAAGAAGACAGGAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629732.1 |
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| CDS CAA 90 bp | ACTGTCAAGAATGTCCCCAGCTCCTGTCTTCTTGCTCAATTGCCTTaGTCCCATGGCTTTCATCACGGATGTATGATAGCTGCTGTTCCT | + |
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Preference number: 6 (lower is better) Translates to: TVKNVPSSCLLAQLP*SHGFHHGCMIAAVP Trigger: AGGAACAGCAGCTATCATACATCCGTGATGAAAGCCATGGGACAAAGGCAATTGAGCAAGAAGACAGGAGCTGGGGACATTCTTGACAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629732.1 |
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| CDS CAA 90 bp | ATCGTCTTACCACTGCAGTCCATGAAAAGTGCACTGACAAGAACATaGGGATCTCCAGGTAGTTGTTTCTACCCAGGAAGAGACGAGGGA | + |
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Preference number: 6 (lower is better) Translates to: IVLPLQSMKSALTRT*GSPGSCFYPGRDEG Trigger: TCCCTCGTCTCTTCCTGGGTAGAAACAACTACCTGGAGATCCCAATGTTCTTGTCAGTGCACTTTTCATGGACTGCAGTGGTAAGACGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000628328.3 ENST00000662411.1 |
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| CDS GCA 72 bp | TTTGTCCCATGGCTTTCATCACGGATGTATGATAGCTaGTGTTCCTCCAGGAATTCTCTCTGCATTCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: FVPWLSSRMYDS*CSSRNSLCIPE Trigger: CTCAGGAATGCAGAGAGAATTCCTGGAGGAACAGCAGCTATCATACATCCGTGATGAAAGCCATGGGACAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629732.1 |
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| CDS CAA 72 bp | AATGTCCCCAGCTCCTGTCTTCTTGCTCAATTGCCTTaGTCCCATGGCTTTCATCACGGATGTATGATAGCT | + |
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Preference number: 6 (lower is better) Translates to: NVPSSCLLAQLP*SHGFHHGCMIA Trigger: AGCTATCATACATCCGTGATGAAAGCCATGGGACAAAGGCAATTGAGCAAGAAGACAGGAGCTGGGGACATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629732.1 |
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| CDS CAA 72 bp | CCACTGCAGTCCATGAAAAGTGCACTGACAAGAACATaGGGATCTCCAGGTAGTTGTTTCTACCCAGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: PLQSMKSALTRT*GSPGSCFYPGR Trigger: TCTTCCTGGGTAGAAACAACTACCTGGAGATCCCAATGTTCTTGTCAGTGCACTTTTCATGGACTGCAGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000628328.3 ENST00000662411.1 |
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| CDS TCA 72 bp | GGAGTCAGTCTTGCTAGTTGTGTGACATTGGGCAAGTaGCATAAATTCAGCTGTTTCCTTATCTGCTGTCGC | + |
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Preference number: 6 (lower is better) Translates to: GVSLASCVTLGK*HKFSCFLICCR Trigger: GCGACAGCAGATAAGGAAACAGCTGAATTTATGTCACTTGCCCAATGTCACACAACTAGCAAGACTGACTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000628762.2 |
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| CDS TCA 72 bp | AGGCATCCCCAGTTATGGGTAGAGAGTCCTCTTCGGTaGGTTCACTCTTCTGCTTGGATCAATTTTGTCTTT | + |
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Preference number: 6 (lower is better) Translates to: RHPQLWVESPLR*VHSSAWINFVF Trigger: AAAGACAAAATTGATCCAAGCAGAAGAGTGAACTCACCGAAGAGGACTCTCTACCCATAACTGGGGATGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000662411.1 |
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| CDS CAA 72 bp | CTGTGTTGGACAACACAGATACAGGATAAAGTTCTATaGGACAGCATTGGGCTAGGAGAAGCATGTCCAAGC | + |
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Preference number: 6 (lower is better) Translates to: LCWTTQIQDKVL*DSIGLGEACPS Trigger: GCTTGGACATGCTTCTCCTAGCCCAATGCTGTCCAATAGAACTTTATCCTGTATCTGTGTTGTCCAACACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000625477.1 |
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| CDS CAA 90 bp | GCCCTAAAATTTGTATTTCTAACAAGTTTCCAGGTGATGCTGATGTaGCTGGTCCAGGAACCACACTCTGAGAACCTTTGGCCTATCTCA | + |
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Preference number: 6 (lower is better) Translates to: ALKFVFLTSFQVMLM*LVQEPHSENLWPIS Trigger: TGAGATAGGCCAAAGGTTCTCAGAGTGTGGTTCCTGGACCAGCAACATCAGCATCACCTGGAAACTTGTTAGAAATACAAATTTTAGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629732.1 |
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| CDS TCA 72 bp | GTGATGAGCTTCAAGGAGTCAGTCTTGCTAGTTGTGTaGCATTGGGCAAGTGACATAAATTCAGCTGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: VMSFKESVLLVV*HWASDINSAVS Trigger: GGAAACAGCTGAATTTATGTCACTTGCCCAATGTCACACAACTAGCAAGACTGACTCCTTGAAGCTCATCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000628762.2 ENST00000629732.1 |
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| CDS CAA 72 bp | TTTGTATTTCTAACAAGTTTCCAGGTGATGCTGATGTaGCTGGTCCAGGAACCACACTCTGAGAACCTTTGG | + |
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Preference number: 6 (lower is better) Translates to: FVFLTSFQVMLM*LVQEPHSENLW Trigger: CCAAAGGTTCTCAGAGTGTGGTTCCTGGACCAGCAACATCAGCATCACCTGGAAACTTGTTAGAAATACAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629732.1 |
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| CDS CCA 72 bp | TTCCTTTTTAAATCCAGGACTTACTTGGTTTGTGTTTaGGCATCCAACACATCGTCTTACCACTGCAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: FLFKSRTYLVCV*ASNTSSYHCSP Trigger: TGGACTGCAGTGGTAAGACGATGTGTTGGATGCCCAAACACAAACCAAGTAAGTCCTGGATTTAAAAAGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000628328.3 |
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| CDS CCA 72 bp | ACATTTAGCCCTTCCTTTTTAAATCCAGGACTTACTTaGTTTGTGTTTGGGCATCCAACACATCGTCTTACC | + |
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Preference number: 6 (lower is better) Translates to: TFSPSFLNPGLT*FVFGHPTHRLT Trigger: GGTAAGACGATGTGTTGGATGCCCAAACACAAACCAAGTAAGTCCTGGATTTAAAAAGGAAGGGCTAAATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000628328.3 |
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| CDS TCA 72 bp | GGAGTCAGTCTTGCTAGTTGTGTGACATTGGGCAAGTaGCATAAATTCAGCTGTTTCCTTATCTGTAAAATG | + |
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Preference number: 6 (lower is better) Translates to: GVSLASCVTLGK*HKFSCFLICKM Trigger: CATTTTACAGATAAGGAAACAGCTGAATTTATGTCACTTGCCCAATGTCACACAACTAGCAAGACTGACTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629732.1 |
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| CDS TCA 72 bp | GGTTGCAAAGAAAGCGTGGAAAAGAAGATCACCAGATaGGAGAGGACTAGAGAATCTTATGATAGATTATTA | + |
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Preference number: 6 (lower is better) Translates to: GCKESVEKKITR*ERTRESYDRLL Trigger: TAATAATCTATCATAAGATTCTCTAGTCCTCTCTCATCTGGTGATCTTCTTTTCCACGCTTTCTTTGCAACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629732.1 |
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| CDS GCA 72 bp | TTTCAACAGGATATGCTTTCAAAGTTTGAAGACCACTaGTCTAAAGCAGTTCTTACATGTGATGAGCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: FQQDMLSKFEDH*SKAVLTCDELQ Trigger: TTGAAGCTCATCACATGTAAGAACTGCTTTAGAGCAGTGGTCTTCAAACTTTGAAAGCATATCCTGTTGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629732.1 |
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