Pregenerated sensors for LINC01011 (Homo sapiens)
Ensembl gene IDs: ENSG00000244041Ensembl transcript IDs: ENST00000445000.2, ENST00000450238.5, ENST00000454015.1, ENST00000605901.1
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGGAGCGCTCCGCCACCAGGGGACAGTGCGGCGCCGACCGTGGGCTaGTGGCTCGGCCGAGGGCACCCAGGCGCCCTCCGCTGCAGCGGG | + |
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Preference number: 5 (lower is better) Translates to: GSAPPPGDSAAPTVG*WLGRGHPGALRCSG Trigger: CCCGCTGCAGCGGAGGGCGCCTGGGTGCCCTCGGCCGAGCCAGCAGCCCACGGTCGGCGCCGCACTGTCCCCTGGTGGCGGAGCGCTCCC 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445000.2 |
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| CDS GCA 90 bp | GCGTGGCGAGCCGGGTCGCGGGAGCGCTCCGCCACCAGGGGACAGTaGGGCGCCGACCGTGGGCTGCTGGCTCGGCCGAGGGCACCCAGG | + |
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Preference number: 5 (lower is better) Translates to: AWRAGSRERSATRGQ*GADRGLLARPRAPR Trigger: CCTGGGTGCCCTCGGCCGAGCCAGCAGCCCACGGTCGGCGCCGCACTGTCCCCTGGTGGCGGAGCGCTCCCGCGACCCGGCTCGCCACGC 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445000.2 |
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| CDS GCA 90 bp | GCTCGGCCGAGGGCACCCAGGCGCCCTCCGCTGCAGCGGGCTGGTTaGAGAGGGGCGGGCTCTCGCCAGGCAGCAGGCGCTCCGGGCGCA | + |
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Preference number: 5 (lower is better) Translates to: ARPRAPRRPPLQRAG*RGAGSRQAAGAPGA Trigger: TGCGCCCGGAGCGCCTGCTGCCTGGCGAGAGCCCGCCCCTCTGCAACCAGCCCGCTGCAGCGGAGGGCGCCTGGGTGCCCTCGGCCGAGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445000.2 |
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| CDS CCA 90 bp | GCTGGCTCGGCCGAGGGCACCCAGGCGCCCTCCGCTGCAGCGGGCTaGTTGCAGAGGGGCGGGCTCTCGCCAGGCAGCAGGCGCTCCGGG | + |
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Preference number: 5 (lower is better) Translates to: AGSAEGTQAPSAAAG*LQRGGLSPGSRRSG Trigger: CCCGGAGCGCCTGCTGCCTGGCGAGAGCCCGCCCCTCTGCAACCAGCCCGCTGCAGCGGAGGGCGCCTGGGTGCCCTCGGCCGAGCCAGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445000.2 |
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| CDS CCA 90 bp | GTCGCGGGAGCGCTCCGCCACCAGGGGACAGTGCGGCGCCGACCGTaGGCTGCTGGCTCGGCCGAGGGCACCCAGGCGCCCTCCGCTGCA | + |
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Preference number: 5 (lower is better) Translates to: VAGALRHQGTVRRRP*AAGSAEGTQAPSAA Trigger: TGCAGCGGAGGGCGCCTGGGTGCCCTCGGCCGAGCCAGCAGCCCACGGTCGGCGCCGCACTGTCCCCTGGTGGCGGAGCGCTCCCGCGAC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445000.2 |
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| CDS GCA 90 bp | ACCGTGGGCTGCTGGCTCGGCCGAGGGCACCCAGGCGCCCTCCGCTaGAGCGGGCTGGTTGCAGAGGGGCGGGCTCTCGCCAGGCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: TVGCWLGRGHPGALR*SGLVAEGRALARQQ Trigger: CTGCTGCCTGGCGAGAGCCCGCCCCTCTGCAACCAGCCCGCTGCAGCGGAGGGCGCCTGGGTGCCCTCGGCCGAGCCAGCAGCCCACGGT 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445000.2 |
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| CDS TCA 90 bp | CCGGCTCGTCTCCCCTTCTTCCCGGAGTCCATGCCTTGCTGTCGGTaGCTCATCCCACACTGTGCCCTGCGACTCACCCTGTCGCTTTCT | + |
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Preference number: 5 (lower is better) Translates to: PARLPFFPESMPCCR*LIPHCALRLTLSLS Trigger: AGAAAGCGACAGGGTGAGTCGCAGGGCACAGTGTGGGATGAGTCACCGACAGCAAGGCATGGACTCCGGGAAGAAGGGGAGACGAGCCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445000.2 |
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| CDS GCA 90 bp | CTTCCCGGAGTCCATGCCTTGCTGTCGGTGACTCATCCCACACTGTaGCCTGCGACTCACCCTGTCGCTTTCTCTGTTCATCCGGGAGCG | + |
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Preference number: 5 (lower is better) Translates to: LPGVHALLSVTHPTL*PATHPVAFSVHPGA Trigger: CGCTCCCGGATGAACAGAGAAAGCGACAGGGTGAGTCGCAGGGCACAGTGTGGGATGAGTCACCGACAGCAAGGCATGGACTCCGGGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445000.2 |
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| CDS GCA 90 bp | GATGCAAGTCTTTCCCGGCTCGTCTCCCCTTCTTCCCGGAGTCCATaGCTTGCTGTCGGTGACTCATCCCACACTGTGCCCTGCGACTCA | + |
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Preference number: 5 (lower is better) Translates to: DASLSRLVSPSSRSP*LAVGDSSHTVPCDS Trigger: TGAGTCGCAGGGCACAGTGTGGGATGAGTCACCGACAGCAAGGCATGGACTCCGGGAAGAAGGGGAGACGAGCCGGGAAAGACTTGCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445000.2 |
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| CDS GCA 90 bp | GCGCATGCTTGGAGGATTTCAGGATCTGACTCAGCTTCCCCGCCATaGATCCCTCCACCAGCATCCAGTCACACCTCTGCAGCCTTCAGT | + |
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Preference number: 5 (lower is better) Translates to: AHAWRISGSDSASPP*IPPPASSHTSAAFS Trigger: ACTGAAGGCTGCAGAGGTGTGACTGGATGCTGGTGGAGGGATGCATGGCGGGGAAGCTGAGTCAGATCCTGAAATCCTCCAAGCATGCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445000.2 |
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| CDS CCA 90 bp | CTTCCCAGGCCACCAGGCGACAGCAGCCTCCGCCTTCATTTCCCTTaGTCATTTCAGGCGCATGCTTGGAGGATTTCAGGATCTGACTCA | + |
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Preference number: 5 (lower is better) Translates to: LPRPPGDSSLRLHFP*SFQAHAWRISGSDS Trigger: TGAGTCAGATCCTGAAATCCTCCAAGCATGCGCCTGAAATGACCAAGGGAAATGAAGGCGGAGGCTGCTGTCGCCTGGTGGCCTGGGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445000.2 |
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| CDS CCA 90 bp | AGCAGCCTCCGCCTTCATTTCCCTTGGTCATTTCAGGCGCATGCTTaGAGGATTTCAGGATCTGACTCAGCTTCCCCGCCATGCATCCCT | + |
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Preference number: 5 (lower is better) Translates to: SSLRLHFPWSFQAHA*RISGSDSASPPCIP Trigger: AGGGATGCATGGCGGGGAAGCTGAGTCAGATCCTGAAATCCTCCAAGCATGCGCCTGAAATGACCAAGGGAAATGAAGGCGGAGGCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445000.2 |
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| CDS CCA 90 bp | CAGCTGAAGCTGGCGAAATCCAAGATGGCGCCTCTGAAGAGCCTCTaGCTTTATCATCATCCTGTTCTCATGCTAAACAACATGTCGCCA | + |
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Preference number: 5 (lower is better) Translates to: QLKLAKSKMAPLKSL*LYHHPVLMLNNMSP Trigger: TGGCGACATGTTGTTTAGCATGAGAACAGGATGATGATAAAGCCAGAGGCTCTTCAGAGGCGCCATCTTGGATTTCGCCAGCTTCAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000445000.2 ENST00000450238.5 ENST00000454015.1 ENST00000605901.1 |
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| CDS CCA 90 bp | TTCGCTGGACCCCACCCTGCTTTTGCTGCCCAATGCGATAGCATATaGGACAGAGCTAAATTCCTACTCAGCTGTAACTCTGCTTATTTT | + |
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Preference number: 5 (lower is better) Translates to: FAGPHPAFAAQCDSI*DRAKFLLSCNSAYF Trigger: AAAATAAGCAGAGTTACAGCTGAGTAGGAATTTAGCTCTGTCCCATATGCTATCGCATTGGGCAGCAAAAGCAGGGTGGGGTCCAGCGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000445000.2 ENST00000450238.5 ENST00000454015.1 ENST00000605901.1 |
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| CDS GCA 90 bp | CTGGGAACTGCGGATATAGCTTGCCACAGTATCTTATCAGTTAATTaGATTCTTGATGTGCTGGGAGTCAGCTTGCACAAGTTAAGTCCT | + |
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Preference number: 5 (lower is better) Translates to: LGTADIACHSILSVN*ILDVLGVSLHKLSP Trigger: AGGACTTAACTTGTGCAAGCTGACTCCCAGCACATCAAGAATGCAATTAACTGATAAGATACTGTGGCAAGCTATATCCGCAGTTCCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000445000.2 ENST00000605901.1 |
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| CDS CAA 90 bp | GGCTCGGCCGAGGGCACCCAGGCGCCCTCCGCTGCAGCGGGCTGGTaGCAGAGGGGCGGGCTCTCGCCAGGCAGCAGGCGCTCCGGGCGC | + |
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Preference number: 6 (lower is better) Translates to: GSAEGTQAPSAAAGW*QRGGLSPGSRRSGR Trigger: GCGCCCGGAGCGCCTGCTGCCTGGCGAGAGCCCGCCCCTCTGCAACCAGCCCGCTGCAGCGGAGGGCGCCTGGGTGCCCTCGGCCGAGCC 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445000.2 |
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| CDS GCA 72 bp | TGCTGGCTCGGCCGAGGGCACCCAGGCGCCCTCCGCTaGAGCGGGCTGGTTGCAGAGGGGCGGGCTCTCGCC | + |
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Preference number: 6 (lower is better) Translates to: CWLGRGHPGALR*SGLVAEGRALA Trigger: GGCGAGAGCCCGCCCCTCTGCAACCAGCCCGCTGCAGCGGAGGGCGCCTGGGTGCCCTCGGCCGAGCCAGCA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445000.2 |
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| CDS CCA 72 bp | GCCGAGGGCACCCAGGCGCCCTCCGCTGCAGCGGGCTaGTTGCAGAGGGGCGGGCTCTCGCCAGGCAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: AEGTQAPSAAAG*LQRGGLSPGSR Trigger: CCTGCTGCCTGGCGAGAGCCCGCCCCTCTGCAACCAGCCCGCTGCAGCGGAGGGCGCCTGGGTGCCCTCGGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445000.2 |
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| CDS CCA 72 bp | CACCCTGAGAGCCCCCAGGTCCCAGCCGCGTCCTCCTaGACCCCTCCCAGGCGTGGCGAGCCGGGTCGCGGG | + |
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Preference number: 6 (lower is better) Translates to: HPESPQVPAASS*TPPRRGEPGRG Trigger: CCCGCGACCCGGCTCGCCACGCCTGGGAGGGGTCCAGGAGGACGCGGCTGGGACCTGGGGGCTCTCAGGGTG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000445000.2 |
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| CDS GCA 72 bp | AGGGCACCCAGGCGCCCTCCGCTGCAGCGGGCTGGTTaGAGAGGGGCGGGCTCTCGCCAGGCAGCAGGCGCT | + |
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Preference number: 6 (lower is better) Translates to: RAPRRPPLQRAG*RGAGSRQAAGA Trigger: AGCGCCTGCTGCCTGGCGAGAGCCCGCCCCTCTGCAACCAGCCCGCTGCAGCGGAGGGCGCCTGGGTGCCCT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445000.2 |
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| CDS TCA 72 bp | TCCCTCCAGCCCCGCCTCCCCTACAGTGCTCCGTGCTaGGGTCGCACGTTCTCTCCTCCCTCCAGCTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: SLQPRLPYSAPC*GRTFSPPSSSL Trigger: CAGGGAGCTGGAGGGAGGAGAGAACGTGCGACCTCAGCACGGAGCACTGTAGGGGAGGCGGGGCTGGAGGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445000.2 |
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| CDS CCA 72 bp | CCCTCATCCCGGACGGGCCGGGGATTGGGACTGGCCTaGGGTCTCCTACTCTCCTACTCCGCGCAGGAAGTA | + |
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Preference number: 6 (lower is better) Translates to: PSSRTGRGLGLA*GLLLSYSAQEV Trigger: TACTTCCTGCGCGGAGTAGGAGAGTAGGAGACCCCAGGCCAGTCCCAATCCCCGGCCCGTCCGGGATGAGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445000.2 |
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| CDS CCA 72 bp | CTCCTACTCTCCTACTCCGCGCAGGAAGTAGCCCCTTaGCAGGACCGGCGGTGCCTGCTGCTTTCAGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: LLLSYSAQEVAP*QDRRCLLLSGA Trigger: GGCTCCTGAAAGCAGCAGGCACCGCCGGTCCTGCCAAGGGGCTACTTCCTGCGCGGAGTAGGAGAGTAGGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445000.2 |
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| CDS CAA 72 bp | CCCGGCTCGTCTCCCCTTCTTCCCGGAGTCCATGCCTaGCTGTCGGTGACTCATCCCACACTGTGCCCTGCG | + |
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Preference number: 6 (lower is better) Translates to: PGSSPLLPGVHA*LSVTHPTLCPA Trigger: CGCAGGGCACAGTGTGGGATGAGTCACCGACAGCAAGGCATGGACTCCGGGAAGAAGGGGAGACGAGCCGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445000.2 |
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| CDS CAA 72 bp | GCGGTGCCTGCTGCTTTCAGGAGCCCCGAGCCGCTTTaGTCTGGGTGCAGCTCAGCTCACATCCCCGATGCA | + |
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Preference number: 6 (lower is better) Translates to: AVPAAFRSPEPL*SGCSSAHIPDA Trigger: TGCATCGGGGATGTGAGCTGAGCTGCACCCAGACAAAAGCGGCTCGGGGCTCCTGAAAGCAGCAGGCACCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445000.2 |
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| CDS CAA 72 bp | TCTCCTACTCTCCTACTCCGCGCAGGAAGTAGCCCCTaGGCAGGACCGGCGGTGCCTGCTGCTTTCAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: SPTLLLRAGSSP*AGPAVPAAFRS Trigger: GCTCCTGAAAGCAGCAGGCACCGCCGGTCCTGCCAAGGGGCTACTTCCTGCGCGGAGTAGGAGAGTAGGAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445000.2 |
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| CDS CAA 90 bp | GCAGGACCGGCGGTGCCTGCTGCTTTCAGGAGCCCCGAGCCGCTTTaGTCTGGGTGCAGCTCAGCTCACATCCCCGATGCAAGTCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: AGPAVPAAFRSPEPL*SGCSSAHIPDASLS Trigger: GGAAAGACTTGCATCGGGGATGTGAGCTGAGCTGCACCCAGACAAAAGCGGCTCGGGGCTCCTGAAAGCAGCAGGCACCGCCGGTCCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000445000.2 |
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| CDS TCA 72 bp | CTCCCCTTCTTCCCGGAGTCCATGCCTTGCTGTCGGTaGCTCATCCCACACTGTGCCCTGCGACTCACCCTG | + |
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Preference number: 6 (lower is better) Translates to: LPFFPESMPCCR*LIPHCALRLTL Trigger: CAGGGTGAGTCGCAGGGCACAGTGTGGGATGAGTCACCGACAGCAAGGCATGGACTCCGGGAAGAAGGGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445000.2 |
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| CDS GCA 72 bp | CTTTCCCGGCTCGTCTCCCCTTCTTCCCGGAGTCCATaGCTTGCTGTCGGTGACTCATCCCACACTGTGCCC | + |
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Preference number: 6 (lower is better) Translates to: LSRLVSPSSRSP*LAVGDSSHTVP Trigger: GGGCACAGTGTGGGATGAGTCACCGACAGCAAGGCATGGACTCCGGGAAGAAGGGGAGACGAGCCGGGAAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445000.2 |
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| CDS CAA 90 bp | CAAGTCTTTCCCGGCTCGTCTCCCCTTCTTCCCGGAGTCCATGCCTaGCTGTCGGTGACTCATCCCACACTGTGCCCTGCGACTCACCCT | + |
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Preference number: 6 (lower is better) Translates to: QVFPGSSPLLPGVHA*LSVTHPTLCPATHP Trigger: AGGGTGAGTCGCAGGGCACAGTGTGGGATGAGTCACCGACAGCAAGGCATGGACTCCGGGAAGAAGGGGAGACGAGCCGGGAAAGACTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445000.2 |
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| CDS CAA 72 bp | GCCACCAGGCGACAGCAGCCTCCGCCTTCATTTCCCTaGGTCATTTCAGGCGCATGCTTGGAGGATTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: ATRRQQPPPSFP*VISGACLEDFR Trigger: CCTGAAATCCTCCAAGCATGCGCCTGAAATGACCAAGGGAAATGAAGGCGGAGGCTGCTGTCGCCTGGTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445000.2 |
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| CDS GCA 72 bp | TGGAGGATTTCAGGATCTGACTCAGCTTCCCCGCCATaGATCCCTCCACCAGCATCCAGTCACACCTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: WRISGSDSASPP*IPPPASSHTSA Trigger: TGCAGAGGTGTGACTGGATGCTGGTGGAGGGATGCATGGCGGGGAAGCTGAGTCAGATCCTGAAATCCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000445000.2 |
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| CDS GCA 72 bp | GTCCATGCCTTGCTGTCGGTGACTCATCCCACACTGTaGCCTGCGACTCACCCTGTCGCTTTCTCTGTTCAT | + |
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Preference number: 6 (lower is better) Translates to: VHALLSVTHPTL*PATHPVAFSVH Trigger: ATGAACAGAGAAAGCGACAGGGTGAGTCGCAGGGCACAGTGTGGGATGAGTCACCGACAGCAAGGCATGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445000.2 |
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| CDS CCA 72 bp | CCACCAGGCGACAGCAGCCTCCGCCTTCATTTCCCTTaGTCATTTCAGGCGCATGCTTGGAGGATTTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: PPGDSSLRLHFP*SFQAHAWRISG Trigger: TCCTGAAATCCTCCAAGCATGCGCCTGAAATGACCAAGGGAAATGAAGGCGGAGGCTGCTGTCGCCTGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445000.2 |
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| CDS TCA 72 bp | AACGTGGCTGGGTATGTTACTCATTGCAGTGCCTGCTaGTTTCGCTGGACCCCACCCTGCTTTTGCTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: NVAGYVTHCSAC*FRWTPPCFCCP Trigger: TGGGCAGCAAAAGCAGGGTGGGGTCCAGCGAAATCAGCAGGCACTGCAATGAGTAACATACCCAGCCACGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000445000.2 ENST00000450238.5 ENST00000454015.1 ENST00000605901.1 |
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| CDS TCA 72 bp | AGTTCCAGGTGCAGAGGCTTTAAGTCTATCCTAAGGTaGTGGACGCCGGGCTTTGGGCGTTATCAACCGGAC | + |
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Preference number: 6 (lower is better) Translates to: SSRCRGFKSILR*WTPGFGRYQPD Trigger: GTCCGGTTGATAACGCCCAAAGCCCGGCGTCCATCACCTTAGGATAGACTTAAAGCCTCTGCACCTGGAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000445000.2 ENST00000605901.1 |
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| CDS GCA 72 bp | CTGCATAAACGTGGCTGGGTATGTTACTCATTGCAGTaGCTGCTGATTTCGCTGGACCCCACCCTGCTTTTG | + |
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Preference number: 6 (lower is better) Translates to: LHKRGWVCYSLQ*LLISLDPTLLL Trigger: CAAAAGCAGGGTGGGGTCCAGCGAAATCAGCAGGCACTGCAATGAGTAACATACCCAGCCACGTTTATGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000445000.2 ENST00000450238.5 ENST00000454015.1 ENST00000605901.1 |
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| CDS GCA 72 bp | GATTTCGCTGGACCCCACCCTGCTTTTGCTGCCCAATaGGATAGCATATGGGACAGAGCTAAATTCCTACTC | + |
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Preference number: 6 (lower is better) Translates to: DFAGPHPAFAAQ*DSIWDRAKFLL Trigger: GAGTAGGAATTTAGCTCTGTCCCATATGCTATCGCATTGGGCAGCAAAAGCAGGGTGGGGTCCAGCGAAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000445000.2 ENST00000450238.5 ENST00000454015.1 ENST00000605901.1 |
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| CDS CAA 72 bp | TCCAATTCCATAGCCATTGAATACAGCCTGCACTGCTaGACACACTCCCTTTCGGTTTCGTGCATTGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: SNSIAIEYSLHC*THSLSVSCIGL Trigger: GAGGCCAATGCACGAAACCGAAAGGGAGTGTGTCAAGCAGTGCAGGCTGTATTCAATGGCTATGGAATTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000445000.2 ENST00000450238.5 ENST00000454015.1 ENST00000605901.1 |
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| CDS CAA 90 bp | TTCAGATCTTCCAATTCCATAGCCATTGAATACAGCCTGCACTGCTaGACACACTCCCTTTCGGTTTCGTGCATTGGCCTCACCACGCAA | + |
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Preference number: 6 (lower is better) Translates to: FRSSNSIAIEYSLHC*THSLSVSCIGLTTQ Trigger: TTGCGTGGTGAGGCCAATGCACGAAACCGAAAGGGAGTGTGTCAAGCAGTGCAGGCTGTATTCAATGGCTATGGAATTGGAAGATCTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000445000.2 ENST00000450238.5 ENST00000454015.1 ENST00000605901.1 |
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| CDS CCA 72 bp | CTGGCGAAATCCAAGATGGCGCCTCTGAAGAGCCTCTaGCTTTATCATCATCCTGTTCTCATGCTAAACAAC | + |
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Preference number: 6 (lower is better) Translates to: LAKSKMAPLKSL*LYHHPVLMLNN Trigger: GTTGTTTAGCATGAGAACAGGATGATGATAAAGCCAGAGGCTCTTCAGAGGCGCCATCTTGGATTTCGCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000445000.2 ENST00000450238.5 ENST00000454015.1 ENST00000605901.1 |
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| CDS GCA 72 bp | GCGGATATAGCTTGCCACAGTATCTTATCAGTTAATTaGATTCTTGATGTGCTGGGAGTCAGCTTGCACAAG | + |
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Preference number: 6 (lower is better) Translates to: ADIACHSILSVN*ILDVLGVSLHK Trigger: CTTGTGCAAGCTGACTCCCAGCACATCAAGAATGCAATTAACTGATAAGATACTGTGGCAAGCTATATCCGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000445000.2 ENST00000605901.1 |
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| CDS CCA 72 bp | GGTTTCATTTTCGTAAAAATGCTGCATAAACGTGGCTaGGTATGTTACTCATTGCAGTGCCTGCTGATTTCG | + |
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Preference number: 6 (lower is better) Translates to: GFIFVKMLHKRG*VCYSLQCLLIS Trigger: CGAAATCAGCAGGCACTGCAATGAGTAACATACCCAGCCACGTTTATGCAGCATTTTTACGAAAATGAAACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000445000.2 ENST00000450238.5 ENST00000454015.1 ENST00000605901.1 |
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| CDS CAA 72 bp | ATTGTATGTATTATAGAACAGTCCTCTGCGCTGAGCTaGGACTTAAAGTGGAAAGGCTTACATTTGCAGAAT | + |
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Preference number: 6 (lower is better) Translates to: IVCIIEQSSALS*DLKWKGLHLQN Trigger: ATTCTGCAAATGTAAGCCTTTCCACTTTAAGTCCAAGCTCAGCGCAGAGGACTGTTCTATAATACATACAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445000.2 |
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| CDS GCA 72 bp | TTTAAACTAAATTGTATGTATTATAGAACAGTCCTCTaGGCTGAGCTTGGACTTAAAGTGGAAAGGCTTACA | + |
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Preference number: 6 (lower is better) Translates to: FKLNCMYYRTVL*AELGLKVERLT Trigger: TGTAAGCCTTTCCACTTTAAGTCCAAGCTCAGCGCAGAGGACTGTTCTATAATACATACAATTTAGTTTAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000445000.2 |
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