Pregenerated sensors for LINC01001 (Homo sapiens)

Ensembl gene IDs: ENSG00000230724

Ensembl transcript IDs: ENST00000607448.5

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	CATAATGTAGAATCAGTGGGCGTGTTAAGCTTGTTTTCCTGCAACTaGATGTTCCCACCTCCTGCTGTGTGGCTCCTTGCGGCTCCATGG	+
Preference number: 5 (lower is better) Translates to: HNVESVGVLSLFSCN*MFPPPAVWLLAAPW Trigger: CCATGGAGCCGCAAGGAGCCACACAGCAGGAGGTGGGAACATCCAGTTGCAGGAAAACAAGCTTAACACGCCCACTGATTCTACATTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607448.5
CDS GCA 72 bp	AAGCTTGTTTTCCTGCAACTGGATGTTCCCACCTCCTaGTGTGTGGCTCCTTGCGGCTCCATGGCTCAGGGG	+
Preference number: 6 (lower is better) Translates to: KLVFLQLDVPTS*CVAPCGSMAQG Trigger: CCCCTGAGCCATGGAGCCGCAAGGAGCCACACAGCAGGAGGTGGGAACATCCAGTTGCAGGAAAACAAGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000607448.5
CDS TCA 72 bp	CCCATCTGGCCAACATGGCCAACCTGGCCACCACGGTaGAACTCTGACTCTACAAAAATGATCTGGGCATGG	+
Preference number: 6 (lower is better) Translates to: PIWPTWPTWPPR*NSDSTKMIWAW Trigger: CCATGCCCAGATCATTTTTGTAGAGTCAGAGTTTCACCGTGGTGGCCAGGTTGGCCATGTTGGCCAGATGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000607448.5
CDS TCA 72 bp	GCCAACATGGCCAACCTGGCCACCACGGTGAAACTCTaGCTCTACAAAAATGATCTGGGCATGGGTGACATG	+
Preference number: 6 (lower is better) Translates to: ANMANLATTVKL*LYKNDLGMGDM Trigger: CATGTCACCCATGCCCAGATCATTTTTGTAGAGTCAGAGTTTCACCGTGGTGGCCAGGTTGGCCATGTTGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000607448.5

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